From 1a609502c8d4c8f217da64265e062b4288344682 Mon Sep 17 00:00:00 2001 From: Will Anderson Date: Mon, 27 Apr 2026 15:37:42 -0500 Subject: [PATCH 01/18] =?UTF-8?q?init:=20Engram=20v0.1=20=E2=80=94=20nativ?= =?UTF-8?q?e=20memory=20substrate=20for=20accumulating=20intelligence?= MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit Memory is not stored and retrieved — it is activated and propagated. Implements the spreading activation model with salience decay, typed edges, four memory tiers, and flat cosine vector search over a sled embedded store. --- engram/.gitignore | 3 + engram/Cargo.lock | 671 ++++++++++++++++++++ engram/Cargo.toml | 20 + engram/README.md | 179 ++++++ engram/bindings/go/README.md | 25 + engram/bindings/kotlin/README.md | 21 + engram/bindings/typescript/README.md | 21 + engram/crates/engram-core/Cargo.toml | 14 + engram/crates/engram-core/src/activation.rs | 240 +++++++ engram/crates/engram-core/src/db.rs | 170 +++++ engram/crates/engram-core/src/error.rs | 24 + engram/crates/engram-core/src/graph.rs | 90 +++ engram/crates/engram-core/src/lib.rs | 46 ++ engram/crates/engram-core/src/salience.rs | 47 ++ engram/crates/engram-core/src/storage.rs | 174 +++++ engram/crates/engram-core/src/types.rs | 193 ++++++ engram/crates/engram-core/src/vector.rs | 82 +++ engram/crates/engram-ffi/Cargo.toml | 13 + engram/crates/engram-ffi/src/lib.rs | 118 ++++ 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[ + "anyhow", + "id-arena", + "indexmap", + "log", + "semver", + "serde", + "serde_derive", + "serde_json", + "unicode-xid", + "wasmparser", +] + +[[package]] +name = "zmij" +version = "1.0.21" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "b8848ee67ecc8aedbaf3e4122217aff892639231befc6a1b58d29fff4c2cabaa" diff --git a/engram/Cargo.toml b/engram/Cargo.toml new file mode 100644 index 0000000..6f253f4 --- /dev/null +++ b/engram/Cargo.toml @@ -0,0 +1,20 @@ +[workspace] +resolver = "2" +members = [ + "crates/engram-core", + "crates/engram-ffi", +] + +# Workspace-level example that depends on engram-core. +# Run with: cargo run --example basic +[[example]] +name = "basic" +path = "examples/basic.rs" + +[package] +name = "engram" +version = "0.1.0" +edition = "2021" + +[dependencies] +engram-core = { path = "crates/engram-core" } diff --git a/engram/README.md b/engram/README.md new file mode 100644 index 0000000..af01dda --- /dev/null +++ b/engram/README.md @@ -0,0 +1,179 @@ +# Engram + +**A local-first memory substrate for accumulating intelligence.** + +An *engram* is the physical trace of a memory in the brain — the actual encoded substrate, not an abstraction above it. That's what this is. + +--- + +## Why existing databases are wrong for this use case + +Relational databases store rows and retrieve them by predicate. Key-value stores retrieve by exact key. Vector databases retrieve by geometric proximity. All of them share the same fundamental model: **you store data in, you query it out**. Storage and retrieval are separate systems. + +The brain doesn't work this way. + +When you remember something, you don't query your hippocampus. You activate a memory trace and the pattern *propagates*. Long-term potentiation — the strengthening of synaptic connections through co-activation — is simultaneously the storage mechanism and the retrieval mechanism. The structure that holds the memory is the same structure that surfaces it. + +No existing database models this. Engram does. + +--- + +## The Spreading Activation Model + +Engram retrieval works through **spreading activation**: + +1. **Seeds** — you name one or more nodes you know are relevant (e.g. the current task, recent context, a concept you're reasoning about) +2. **Query embedding** — you provide a semantic vector representing the direction of your current thought +3. **Propagation** — activation flows outward from seeds through weighted edges. At each hop, strength attenuates multiplicatively: + + ``` + strength = parent_strength × edge_weight × target_salience × cosine_sim(query, target) + ``` + +4. **Pruning** — paths weaker than a threshold are cut (the attention filter) +5. **Return** — the top-N nodes by activation strength + +This is not a query. It is a *pattern completion*. The system surfaces what is most associatively relevant to the current context, weighted by how strongly those things have been reinforced over time. + +--- + +## The Four Memory Tiers + +| Tier | Analogy | Contents | +|------|---------|----------| +| `Working` | Prefrontal working memory | K most recently activated nodes — hot, fast | +| `Episodic` | Hippocampus | Time-ordered events and experiences | +| `Semantic` | Neocortex | Concept graph — long-term structural knowledge | +| `Procedural` | Cerebellum / basal ganglia | Patterns, workflows, habits | + +Nodes migrate between tiers based on salience decay and reinforcement. A frequently activated semantic node stays semantic. A rarely-touched episodic memory decays toward procedural background. + +--- + +## Salience — Forgetting as Adaptation + +Salience is not stored permanently. It decays: + +```rust +fn compute_salience(importance: f32, last_activated_ms: i64, activation_count: u64) -> f32 { + let days_since = (now_ms() - last_activated_ms) as f32 / 86_400_000.0; + importance * (1.0 / (1.0 + days_since)) * (activation_count as f32 + 1.0).ln() +} +``` + +Three signals: +- **Importance** (0.0–1.0): set at creation, stable +- **Recency**: decays toward zero as days pass without activation +- **Frequency**: log-compressed count of activations + +Forgetting in Engram is not a bug. It is adaptive pruning. Memories that are never activated again become less likely to surface during retrieval. They are not deleted — they remain in storage — but they stop competing for attention. This is exactly how biological memory works, and why it is adaptive rather than pathological. + +--- + +## Quick Start + +```rust +use engram_core::{EngramDb, Node, Edge, NodeType, MemoryTier, RelationType}; +use std::path::Path; + +// Open or create a database +let db = EngramDb::open(Path::new("/var/lib/my-agent/memory"))?; + +// Create a node with a semantic embedding +let node = Node::new( + NodeType::Concept, + vec![0.9, 0.1, 0.3, 0.7, 0.8, 0.2], // embedding from your LLM + b"Spreading activation surfaces relevant memories by pattern completion".to_vec(), + MemoryTier::Semantic, + 0.9, // importance +); +let id = db.put_node(node)?; + +// Link it to related concepts +let related = db.put_node(Node::new( + NodeType::Concept, + vec![0.8, 0.2, 0.4, 0.6, 0.7, 0.3], + b"Long-term potentiation: co-activation strengthens synaptic weight".to_vec(), + MemoryTier::Semantic, + 0.85, +))?; +db.put_edge(Edge::new(id, related, RelationType::Causes, 0.9))?; + +// Retrieve by spreading activation +let results = db.activate( + &[id], // seeds + &[0.85, 0.15, 0.35, 0.65, 0.75, 0.25], // query embedding + 3, // max hops + 10, // top-N results +)?; + +for r in results { + println!( + "strength={:.4} hops={} — {}", + r.activation_strength, + r.hops, + String::from_utf8_lossy(&r.node.content) + ); +} +``` + +--- + +## Project Structure + +``` +engram/ + crates/ + engram-core/ # The memory engine — storage, graph, activation, salience + engram-ffi/ # C FFI stubs for cross-language bindings + bindings/ + kotlin/ # Android / JVM binding notes + typescript/ # WASM / Node binding notes + go/ # CGo binding notes + examples/ + basic.rs # Full walkthrough: insert, activate, search, decay +``` + +--- + +## Public API + +```rust +impl EngramDb { + fn open(path: &Path) -> EngramResult; + fn put_node(&self, node: Node) -> EngramResult; + fn get_node(&self, id: Uuid) -> EngramResult>; + fn put_edge(&self, edge: Edge) -> EngramResult<()>; + fn get_edges_from(&self, from_id: Uuid) -> EngramResult>; + fn get_edges_to(&self, to_id: Uuid) -> EngramResult>; + fn search_embedding(&self, embedding: &[f32], limit: usize) -> EngramResult>; + fn activate(&self, seeds: &[Uuid], query_embedding: &[f32], max_depth: u8, limit: usize) -> EngramResult>; + fn traverse(&self, from: Uuid, relation: Option, max_depth: u8) -> EngramResult>; + fn touch(&self, id: Uuid) -> EngramResult<()>; + fn decay(&self, factor: f32) -> EngramResult; + fn node_count(&self) -> EngramResult; + fn edge_count(&self) -> EngramResult; +} +``` + +--- + +## Dependencies + +- `sled` — embedded persistent B-tree (no daemon, no network, local-first) +- `bincode` — compact binary serialization +- `uuid` — stable node identity +- `serde` — derive support +- `thiserror` / `anyhow` — error handling + +--- + +## Design Decisions + +**Why sled?** Local-first. No daemon. Transactional. Fast enough for the node counts Engram targets (< 1M nodes). When the right HNSW index is needed, it will layer on top of sled, not replace it. + +**Why flat cosine scan?** Correct and simple. The graph structure itself is the primary retrieval mechanism. Vector search is a secondary signal. HNSW adds complexity and a compile dependency that isn't justified until retrieval quality at scale demands it. + +**Why multiplicative activation?** Because memory is conjunctive. A path requires all of its links to be strong to carry signal. Addition would allow many weak associations to accumulate into false relevance. Multiplication enforces that every factor matters. + +**Why salience decay?** Because not everything that was once important remains important. Adaptive forgetting is not failure — it is the mechanism that keeps attention on what's current. A memory system that never forgets is one that can never focus. diff --git a/engram/bindings/go/README.md b/engram/bindings/go/README.md new file mode 100644 index 0000000..f07dd04 --- /dev/null +++ b/engram/bindings/go/README.md @@ -0,0 +1,25 @@ +# Go Bindings (planned v0.2) + +Engram-core will be exposed to Go via CGo and the `engram-ffi` shared library. + +```go +// #cgo LDFLAGS: -L../../target/release -lengram_ffi +// #include "engram.h" +import "C" +import "unsafe" + +func Open(path string) *EngramDb { + cpath := C.CString(path) + defer C.free(unsafe.Pointer(cpath)) + handle := C.engram_open(cpath) + if handle == nil { + return nil + } + return &EngramDb{handle: handle} +} +``` + +## Status + +Stub only. The header file (`engram.h`) will be generated by `cbindgen` in v0.2. +Full idiomatic Go wrapper with context support and error returns planned. diff --git a/engram/bindings/kotlin/README.md b/engram/bindings/kotlin/README.md new file mode 100644 index 0000000..2d44cac --- /dev/null +++ b/engram/bindings/kotlin/README.md @@ -0,0 +1,21 @@ +# Kotlin / JVM Bindings (planned v0.2) + +Engram-core will be exposed to Kotlin/JVM via the C FFI layer in `engram-ffi`. + +## Approach + +Use JNA (Java Native Access) or JNI with the compiled `libengram_ffi` shared library: + +``` +cargo build --release -p engram-ffi +# produces: target/release/libengram_ffi.dylib (macOS) / libengram_ffi.so (Linux) +``` + +The header file will be generated by `cbindgen` from `engram-ffi/src/lib.rs`. + +## Status + +Stub only. FFI functions exposed: `engram_open`, `engram_close`, `engram_node_count`, +`engram_edge_count`, `engram_decay`, `engram_free_string`. + +Full Kotlin idiomatic wrapper (data classes, coroutine-friendly suspend functions) planned for v0.2. diff --git a/engram/bindings/typescript/README.md b/engram/bindings/typescript/README.md new file mode 100644 index 0000000..29d9861 --- /dev/null +++ b/engram/bindings/typescript/README.md @@ -0,0 +1,21 @@ +# TypeScript Bindings (planned v0.2) + +Two paths for TypeScript/Node.js: + +## Option A — WASM (browser + Node) + +``` +cargo build --target wasm32-unknown-unknown --release -p engram-core +wasm-bindgen target/wasm32-unknown-unknown/release/engram_core.wasm --out-dir pkg/ +``` + +Requires `wasm-bindgen` annotations on public API. Browser-compatible, no native deps. + +## Option B — Node native addon (server-side) + +Use `napi-rs` to generate a Node.js native addon from `engram-core`. Faster than WASM for +server-side agents, but requires a native build step per platform. + +## Status + +Stub only. WASM target is the preferred path for v0.2 given the local-first, embedded philosophy. diff --git a/engram/crates/engram-core/Cargo.toml b/engram/crates/engram-core/Cargo.toml new file mode 100644 index 0000000..8a5761a --- /dev/null +++ b/engram/crates/engram-core/Cargo.toml @@ -0,0 +1,14 @@ +[package] +name = "engram-core" +version = "0.1.0" +edition = "2021" +description = "Engram — native memory substrate for accumulating intelligence" +license = "MIT" + +[dependencies] +sled = "0.34" +uuid = { version = "1", features = ["v4", "serde"] } +serde = { version = "1", features = ["derive"] } +bincode = "1" +anyhow = "1" +thiserror = "1" diff --git a/engram/crates/engram-core/src/activation.rs b/engram/crates/engram-core/src/activation.rs new file mode 100644 index 0000000..c91a113 --- /dev/null +++ b/engram/crates/engram-core/src/activation.rs @@ -0,0 +1,240 @@ +/// Spreading Activation — the core retrieval mechanism of Engram. +/// +/// # The Central Insight +/// +/// Conventional databases separate storage from retrieval. You put data in, +/// you query it out. The storage structure (B-tree, LSM, etc.) and the retrieval +/// mechanism (SQL planner, index scan) are fundamentally different things. +/// +/// The brain doesn't work this way. Memory is not stored and retrieved — +/// it is **activated and propagated**. When you remember something, you don't +/// "query" your hippocampus. You activate a node and the pattern spreads through +/// weighted connections to neighboring nodes. Long-term potentiation IS the storage +/// structure AND the retrieval mechanism simultaneously. +/// +/// This module implements that model directly. +/// +/// # How It Works +/// +/// 1. **Seeds**: Start with one or more known node UUIDs (e.g., the most recent +/// context, the current task, recent observations). +/// +/// 2. **Query embedding**: The semantic vector representing what you're looking +/// for. This is the "direction of thought" — activation flows more strongly +/// toward nodes that are semantically similar to the current context. +/// +/// 3. **BFS propagation**: Activation spreads outward from seeds through edges. +/// At each hop, the strength attenuates based on: +/// - `edge.weight`: how strongly these two nodes are associated +/// - `target.salience`: how salient (recently activated, frequent, important) the target is +/// - `cosine_sim(query, target)`: how semantically relevant the target is to what we want +/// +/// 4. **Pruning**: Paths with activation strength below `PRUNE_THRESHOLD` are cut. +/// This prevents exponential blowup and models the brain's attention filter. +/// +/// 5. **Return**: The top-N nodes by activation strength, with their hop distance. +/// +/// # Activation Formula (per hop) +/// +/// strength = parent_strength × edge_weight × target_salience × cosine_sim(query, target) +/// +/// This is multiplicative: a weak edge, a dormant node, or a semantically irrelevant +/// target all suppress activation. All four factors must be non-trivial for a path +/// to propagate successfully. This is exactly how associative memory works. +/// +/// # Why Multiplication, Not Addition +/// +/// Addition would allow many weak signals to accumulate into false relevance. +/// The brain's associative memory is conjunctive: an activated path requires +/// ALL of its links to be strong enough to carry the signal. Multiplication +/// enforces this. If any factor is near zero, the path dies. +use crate::error::EngramResult; +use crate::graph; +use crate::types::{ActivatedNode, Node}; +use crate::vector::cosine_similarity; +use sled::Db; +use std::collections::{BinaryHeap, HashMap}; +use uuid::Uuid; + +/// Activation strengths below this threshold are pruned from the BFS frontier. +/// 0.01 is deliberately small — we want to allow long indirect chains when +/// the intermediate edges are strong. Raise this to focus retrieval, lower to +/// allow more associative drift. +const PRUNE_THRESHOLD: f32 = 0.01; + +// We need Ord on (f32, Uuid) for the priority queue. Use a wrapper. +#[derive(PartialEq)] +struct Candidate { + strength: f32, + hops: u8, + id: Uuid, +} + +impl Eq for Candidate {} + +impl PartialOrd for Candidate { + fn partial_cmp(&self, other: &Self) -> Option { + Some(self.cmp(other)) + } +} + +impl Ord for Candidate { + fn cmp(&self, other: &Self) -> std::cmp::Ordering { + // BinaryHeap is a max-heap; we want highest-strength first + self.strength + .partial_cmp(&other.strength) + .unwrap_or(std::cmp::Ordering::Equal) + } +} + +/// Run spreading activation from a set of seed nodes. +/// +/// # Arguments +/// * `db` — the open engram database +/// * `seeds` — starting node IDs (the current "active set") +/// * `query_embedding` — semantic vector representing what we're looking for +/// * `max_depth` — maximum number of hops to traverse (typically 2–4) +/// * `limit` — return only the top-N results +/// +/// # Returns +/// Up to `limit` nodes, sorted by activation strength descending. +/// Seed nodes themselves are excluded from the result (they're already known). +pub fn activate( + db: &Db, + seeds: &[Uuid], + query_embedding: &[f32], + max_depth: u8, + limit: usize, +) -> EngramResult> { + // best_strength[id] = highest activation strength seen so far for this node. + // We use this to handle cases where multiple paths lead to the same node — + // the strongest path wins (like the brain's winner-take-most competition). + let mut best_strength: HashMap = HashMap::new(); + + // Priority queue: process highest-strength candidates first. + // This is a best-first BFS — we explore the most promising paths before + // weaker ones, which means pruning cuts off genuinely unimportant branches. + let mut queue: BinaryHeap = BinaryHeap::new(); + + // Initialize: seed nodes start with full strength (1.0). + // They represent our current context — fully activated, zero hops away. + for &seed in seeds { + // Seeds are tracked with strength 1.0 but NOT added to best_strength yet; + // we want to allow other paths to reach them if they form a cycle. + // However, we must visit their neighbors. We add seeds directly. + queue.push(Candidate { + strength: 1.0, + hops: 0, + id: seed, + }); + // Mark seeds so we don't re-process them as results, but allow + // re-traversal from them if another path arrives stronger. + best_strength.insert(seed, (1.0, 0)); + } + + // BFS / best-first traversal + while let Some(Candidate { strength, hops, id }) = queue.pop() { + // Depth limit: don't propagate beyond max_depth + if hops >= max_depth { + continue; + } + + // Retrieve outgoing edges from the current node + let edges = graph::edges_from(db, id)?; + + for edge in &edges { + let target_id = edge.to_id; + + // Load the target node. If it doesn't exist (dangling edge), skip. + let target: Node = match graph::get_node(db, target_id)? { + Some(n) => n, + None => continue, + }; + + // ── Activation strength computation ────────────────────────── + // + // Each factor models a distinct aspect of associative memory: + // + // 1. parent_strength: how strongly was the parent activated? + // Activation attenuates with each hop — deep chains carry less signal. + // + // 2. edge.weight: how strong is the association between these nodes? + // High-weight edges are like well-worn neural pathways — low resistance. + // Low-weight edges are new or rarely traversed — they carry little signal. + // + // 3. target.salience: how salient is the target node right now? + // Dormant nodes (low salience) resist activation. + // Frequently-used, recently-touched nodes activate easily. + // This is how recency and frequency bias retrieval, as in human memory. + // + // 4. cosine_sim(query, target): semantic relevance. + // If the target's embedding is far from what we're looking for, + // the activation doesn't flow there. This is the "direction of thought" + // filtering — the query steers the spread toward relevant regions. + // + // The product of all four is the activation strength at the target. + // All factors are in [0, 1] so the product is also in [0, 1]. + // (Salience can exceed 1 for very active nodes, which is fine — + // it means those nodes are hyper-salient, like obsessive thoughts.) + + let semantic_sim = cosine_similarity(query_embedding, &target.embedding); + // We clamp semantic_sim to [0, 1] so that anti-correlated embeddings + // don't produce negative activation (which would invert the signal). + let semantic_sim = semantic_sim.max(0.0); + + let new_strength = strength * edge.weight * target.salience.max(0.0) * semantic_sim; + + // Prune: if this path is too weak to matter, stop here. + // This is the attention filter — irrelevant associations fade away. + if new_strength < PRUNE_THRESHOLD { + continue; + } + + let next_hops = hops + 1; + + // Winner-take-most: only propagate from this node if this is the + // strongest path we've seen to it so far. This prevents exponential + // blowup when the graph has many parallel paths to the same node. + let is_stronger = match best_strength.get(&target_id) { + Some(&(prev, _)) => new_strength > prev, + None => true, + }; + + if is_stronger { + best_strength.insert(target_id, (new_strength, next_hops)); + queue.push(Candidate { + strength: new_strength, + hops: next_hops, + id: target_id, + }); + } + } + } + + // Collect results: exclude seed nodes, load full Node structs, sort by strength + let seed_set: std::collections::HashSet = seeds.iter().copied().collect(); + + let mut results: Vec = Vec::new(); + for (id, (strength, hops)) in &best_strength { + if seed_set.contains(id) { + continue; + } + if let Some(node) = graph::get_node(db, *id)? { + results.push(ActivatedNode { + node, + activation_strength: *strength, + hops: *hops, + }); + } + } + + // Sort by activation strength descending, take top N + results.sort_by(|a, b| { + b.activation_strength + .partial_cmp(&a.activation_strength) + .unwrap_or(std::cmp::Ordering::Equal) + }); + results.truncate(limit); + + Ok(results) +} diff --git a/engram/crates/engram-core/src/db.rs b/engram/crates/engram-core/src/db.rs new file mode 100644 index 0000000..2b00983 --- /dev/null +++ b/engram/crates/engram-core/src/db.rs @@ -0,0 +1,170 @@ +/// EngramDb — the top-level database handle. +/// +/// All public API methods live here. The internal modules (graph, vector, +/// activation, salience) are implementation details. Callers interact only +/// with EngramDb. +use crate::activation; +use crate::error::{EngramError, EngramResult}; +use crate::graph; +use crate::salience; +use crate::storage; +use crate::types::{ActivatedNode, Edge, Node, RelationType, ScoredNode}; +use crate::vector; +use sled::Db; +use std::path::Path; +use uuid::Uuid; + +pub struct EngramDb { + db: Db, +} + +impl EngramDb { + /// Open (or create) an engram database at the given path. + /// + /// The path should be a directory. Sled will create it if it doesn't exist. + pub fn open(path: &Path) -> EngramResult { + let db = sled::open(path)?; + Ok(Self { db }) + } + + // ── Node operations ─────────────────────────────────────────────────────── + + /// Persist a node. Returns the node's UUID. + /// + /// If a node with the same ID already exists, it is overwritten. + pub fn put_node(&self, node: Node) -> EngramResult { + graph::put_node(&self.db, &node) + } + + /// Retrieve a node by UUID. Returns None if not found. + pub fn get_node(&self, id: Uuid) -> EngramResult> { + graph::get_node(&self.db, id) + } + + // ── Edge operations ─────────────────────────────────────────────────────── + + /// Persist a directed edge between two nodes. + pub fn put_edge(&self, edge: Edge) -> EngramResult<()> { + graph::put_edge(&self.db, &edge) + } + + /// All edges originating from a node. + pub fn get_edges_from(&self, from_id: Uuid) -> EngramResult> { + graph::edges_from(&self.db, from_id) + } + + /// All edges pointing to a node. + pub fn get_edges_to(&self, to_id: Uuid) -> EngramResult> { + graph::edges_to(&self.db, to_id) + } + + // ── Vector search ───────────────────────────────────────────────────────── + + /// Find the `limit` nodes whose embeddings are most similar to `embedding`. + /// + /// Uses flat cosine scan — O(n), correct for < 100k nodes. + pub fn search_embedding(&self, embedding: &[f32], limit: usize) -> EngramResult> { + vector::search_embedding(&self.db, embedding, limit, |id| { + graph::get_node(&self.db, id) + }) + } + + // ── Spreading activation ────────────────────────────────────────────────── + + /// Run spreading activation from a set of seed nodes. + /// + /// Activation propagates outward through the graph. At each hop, strength + /// is attenuated by edge weight, target salience, and semantic similarity + /// to `query_embedding`. The top-`limit` nodes by activation strength are returned. + /// + /// See `activation.rs` for a full description of the algorithm. + pub fn activate( + &self, + seeds: &[Uuid], + query_embedding: &[f32], + max_depth: u8, + limit: usize, + ) -> EngramResult> { + activation::activate(&self.db, seeds, query_embedding, max_depth, limit) + } + + // ── Graph traversal ─────────────────────────────────────────────────────── + + /// BFS traversal from `from`, following edges up to `max_depth` hops. + /// + /// If `relation` is specified, only edges of that type are followed. + /// The seed node itself is excluded from the result. + pub fn traverse( + &self, + from: Uuid, + relation: Option, + max_depth: u8, + ) -> EngramResult> { + graph::traverse(&self.db, from, relation, max_depth) + } + + // ── Salience management ─────────────────────────────────────────────────── + + /// Mark a node as recently activated — update last_activated, increment + /// activation_count, and recompute salience. + /// + /// Call this whenever a node is surfaced during retrieval so that + /// frequently-used nodes accumulate higher salience over time. + pub fn touch(&self, id: Uuid) -> EngramResult<()> { + let mut node = graph::get_node(&self.db, id)?.ok_or(EngramError::NotFound(id))?; + node.last_activated = crate::types::now_ms(); + node.activation_count += 1; + node.salience = salience::compute_salience( + node.importance, + node.last_activated, + node.activation_count, + ); + graph::put_node(&self.db, &node)?; + Ok(()) + } + + /// Apply a multiplicative decay to the salience of every node in the store. + /// + /// `factor` should be in (0.0, 1.0). A factor of 0.95 decays salience by 5%. + /// Returns the number of nodes updated. + /// + /// This models the adaptive nature of forgetting: nodes that haven't been + /// activated recently become less salient over time, making room for new + /// associations. + pub fn decay(&self, factor: f32) -> EngramResult { + if !(0.0..=1.0).contains(&factor) { + return Err(EngramError::InvalidParam(format!( + "decay factor must be in [0.0, 1.0], got {}", + factor + ))); + } + + let nodes = storage::scan_nodes(&self.db)?; + let mut count = 0usize; + for mut node in nodes { + let new_salience = salience::decay_salience(node.salience, factor); + // Always write if salience changed at all (decay always changes it + // unless the node is already at zero) + if new_salience != node.salience { + node.salience = new_salience; + storage::write_salience(&self.db, node.id, new_salience)?; + // Also update the full node record so future reads are consistent + graph::put_node(&self.db, &node)?; + count += 1; + } + } + Ok(count) + } + + // ── Statistics ──────────────────────────────────────────────────────────── + + /// Total number of nodes stored. + pub fn node_count(&self) -> EngramResult { + graph::node_count(&self.db) + } + + /// Total number of edges stored (each directed edge counted once). + pub fn edge_count(&self) -> EngramResult { + graph::edge_count(&self.db) + } +} diff --git a/engram/crates/engram-core/src/error.rs b/engram/crates/engram-core/src/error.rs new file mode 100644 index 0000000..f661ed7 --- /dev/null +++ b/engram/crates/engram-core/src/error.rs @@ -0,0 +1,24 @@ +use thiserror::Error; + +#[derive(Debug, Error)] +pub enum EngramError { + #[error("Storage error: {0}")] + Storage(#[from] sled::Error), + + #[error("Serialization error: {0}")] + Serialization(#[from] bincode::Error), + + #[error("Node not found: {0}")] + NotFound(uuid::Uuid), + + #[error("Invalid embedding: expected {expected} dimensions, got {got}")] + DimensionMismatch { expected: usize, got: usize }, + + #[error("Invalid parameter: {0}")] + InvalidParam(String), + + #[error(transparent)] + Other(#[from] anyhow::Error), +} + +pub type EngramResult = Result; diff --git a/engram/crates/engram-core/src/graph.rs b/engram/crates/engram-core/src/graph.rs new file mode 100644 index 0000000..a1ec1d1 --- /dev/null +++ b/engram/crates/engram-core/src/graph.rs @@ -0,0 +1,90 @@ +/// Graph operations: store and retrieve nodes and edges, and depth-limited traversal. +/// +/// The graph is stored in sled (a persistent embedded B-tree). Edges are indexed +/// in both directions so that forward and backward traversals are equally cheap. +use crate::error::EngramResult; +use crate::storage; +use crate::types::{Edge, Node, RelationType}; +use sled::Db; +use std::collections::{HashSet, VecDeque}; +use uuid::Uuid; + +/// Persist a node and its embedding. Overwrites any existing node with the same id. +pub fn put_node(db: &Db, node: &Node) -> EngramResult { + storage::write_node(db, node)?; + Ok(node.id) +} + +/// Retrieve a node by id. Returns None if not found. +pub fn get_node(db: &Db, id: Uuid) -> EngramResult> { + storage::read_node(db, id) +} + +/// Persist an edge. Both forward and reverse indices are written atomically. +pub fn put_edge(db: &Db, edge: &Edge) -> EngramResult<()> { + storage::write_edge(db, edge) +} + +/// All edges originating from a given node. +pub fn edges_from(db: &Db, from_id: Uuid) -> EngramResult> { + storage::read_edges_from(db, from_id) +} + +/// All edges pointing to a given node. +pub fn edges_to(db: &Db, to_id: Uuid) -> EngramResult> { + storage::read_edges_to(db, to_id) +} + +/// Breadth-first traversal starting from `from`, following forward edges only. +/// +/// If `relation` is Some, only edges of that type are followed. +/// The BFS respects `max_depth` hops. The seed node itself is NOT included. +/// Visited nodes are deduplicated. +pub fn traverse( + db: &Db, + from: Uuid, + relation: Option, + max_depth: u8, +) -> EngramResult> { + let mut visited: HashSet = HashSet::new(); + let mut queue: VecDeque<(Uuid, u8)> = VecDeque::new(); + let mut result: Vec = Vec::new(); + + visited.insert(from); + queue.push_back((from, 0)); + + while let Some((current_id, depth)) = queue.pop_front() { + if depth >= max_depth { + continue; + } + let edges = edges_from(db, current_id)?; + for edge in edges { + // Filter by relation type if specified + if let Some(ref rel) = relation { + if &edge.relation != rel { + continue; + } + } + let next = edge.to_id; + if visited.contains(&next) { + continue; + } + visited.insert(next); + if let Some(node) = get_node(db, next)? { + result.push(node); + queue.push_back((next, depth + 1)); + } + } + } + Ok(result) +} + +/// Count all nodes in the store. +pub fn node_count(db: &Db) -> EngramResult { + storage::count_prefix(db, b"nodes:") +} + +/// Count all edges in the store (forward index only — each edge counted once). +pub fn edge_count(db: &Db) -> EngramResult { + storage::count_prefix(db, b"edges:from:") +} diff --git a/engram/crates/engram-core/src/lib.rs b/engram/crates/engram-core/src/lib.rs new file mode 100644 index 0000000..2777b56 --- /dev/null +++ b/engram/crates/engram-core/src/lib.rs @@ -0,0 +1,46 @@ +/// Engram — a local-first memory substrate for accumulating intelligence. +/// +/// An engram is the physical trace of a memory in the brain — the actual encoded +/// substrate. This crate provides the storage and retrieval primitives that model +/// how biological memory works: not as query-and-retrieve, but as +/// activation-and-propagation. +/// +/// # Quick Start +/// +/// ```rust,no_run +/// use engram_core::{EngramDb, Node, Edge, NodeType, MemoryTier, RelationType}; +/// use std::path::Path; +/// +/// let db = EngramDb::open(Path::new("/tmp/my-engram")).unwrap(); +/// +/// let node = Node::new( +/// NodeType::Memory, +/// vec![0.9, 0.1, 0.3, 0.7], +/// b"The spreading activation model of memory".to_vec(), +/// MemoryTier::Semantic, +/// 0.9, +/// ); +/// let id = db.put_node(node).unwrap(); +/// +/// // Retrieve by spreading activation from a seed +/// let results = db.activate(&[id], &[0.8, 0.2, 0.3, 0.6], 3, 10).unwrap(); +/// for r in results { +/// println!("{:.4} hops={} {:?}", r.activation_strength, r.hops, +/// String::from_utf8_lossy(&r.node.content)); +/// } +/// ``` +pub mod activation; +pub mod db; +pub mod error; +pub mod graph; +pub mod salience; +pub mod storage; +pub mod types; +pub mod vector; + +// Re-export the public surface +pub use db::EngramDb; +pub use error::{EngramError, EngramResult}; +pub use types::{ + ActivatedNode, Edge, MemoryTier, Node, NodeType, RelationType, ScoredNode, now_ms, +}; diff --git a/engram/crates/engram-core/src/salience.rs b/engram/crates/engram-core/src/salience.rs new file mode 100644 index 0000000..99480f0 --- /dev/null +++ b/engram/crates/engram-core/src/salience.rs @@ -0,0 +1,47 @@ +/// Salience is the brain's answer to the question: "Is this worth remembering right now?" +/// +/// It combines three signals: +/// - **Importance**: explicit weight assigned at creation (how significant is this?) +/// - **Recency**: exponential decay since last activation (recent = more relevant) +/// - **Frequency**: log-compressed activation count (things recalled often stay accessible) +/// +/// The formula is intentionally simple. It models forgetting as *adaptive*, not as failure. +/// Things that aren't activated decay toward zero — not because they are lost, but because +/// they are no longer relevant to current cognition. This is how biological memory works. +/// +/// ``` +/// salience = importance × (1 / (1 + days_since_activation)) × ln(activation_count + 1) +/// ``` +/// +/// Note: a node activated for the first time has activation_count=0, so the log term +/// evaluates to ln(1) = 0. We add 1 to the ln argument to give first activations a +/// baseline salience equal to importance × recency. +use crate::types::now_ms; + +/// Compute the current salience of a node. +/// +/// # Arguments +/// * `importance` - explicit importance score, 0.0–1.0 +/// * `last_activated_ms` - Unix milliseconds of last activation +/// * `activation_count` - how many times the node has been activated +/// +/// # Returns +/// Salience score, unbounded above but typically 0.0–5.0 for well-used nodes. +pub fn compute_salience(importance: f32, last_activated_ms: i64, activation_count: u64) -> f32 { + let days_since = (now_ms() - last_activated_ms) as f32 / 86_400_000.0; + // Recency factor: 1.0 at activation, approaching 0 asymptotically. + // At 1 day: 0.5. At 6 days: ~0.14. At 30 days: ~0.03. + let recency = 1.0 / (1.0 + days_since); + // Frequency factor: log-compressed so that going from 0→1 activations matters + // more than going from 100→101. This mirrors the diminishing returns of rehearsal. + let frequency = (activation_count as f32 + 1.0).ln(); + importance * recency * frequency +} + +/// Apply a multiplicative decay to a salience score. +/// +/// Called periodically to age stored salience values without recomputing from scratch. +/// A factor of 0.95 means 5% forgetting per decay cycle. +pub fn decay_salience(current: f32, factor: f32) -> f32 { + (current * factor).max(0.0) +} diff --git a/engram/crates/engram-core/src/storage.rs b/engram/crates/engram-core/src/storage.rs new file mode 100644 index 0000000..f8ea09e --- /dev/null +++ b/engram/crates/engram-core/src/storage.rs @@ -0,0 +1,174 @@ +/// Low-level sled key/value operations for nodes, edges, vectors, and salience. +/// +/// Key schema: +/// nodes:{uuid} → bincode-encoded Node +/// edges:from:{from}:{to} → bincode-encoded Edge +/// edges:to:{to}:{from} → reverse index (same Edge bytes) +/// vectors:{uuid} → raw little-endian f32 bytes +/// salience:{uuid} → 4-byte little-endian f32 +use crate::error::{EngramError, EngramResult}; +use crate::types::{Edge, Node}; +use sled::Db; +use uuid::Uuid; + +// ── Key constructors ────────────────────────────────────────────────────────── + +pub fn node_key(id: Uuid) -> Vec { + format!("nodes:{}", id).into_bytes() +} + +pub fn edge_from_key(from: Uuid, to: Uuid) -> Vec { + format!("edges:from:{}:{}", from, to).into_bytes() +} + +pub fn edge_to_key(to: Uuid, from: Uuid) -> Vec { + format!("edges:to:{}:{}", to, from).into_bytes() +} + +pub fn vector_key(id: Uuid) -> Vec { + format!("vectors:{}", id).into_bytes() +} + +pub fn salience_key(id: Uuid) -> Vec { + format!("salience:{}", id).into_bytes() +} + +// ── Node storage ───────────────────────────────────────────────────────────── + +pub fn write_node(db: &Db, node: &Node) -> EngramResult<()> { + let key = node_key(node.id); + let val = bincode::serialize(node)?; + db.insert(key, val)?; + + // Store the embedding separately for fast vector scan + let vkey = vector_key(node.id); + let vbytes = floats_to_bytes(&node.embedding); + db.insert(vkey, vbytes)?; + + // Store salience separately so the decay pass can update it cheaply + let skey = salience_key(node.id); + db.insert(skey, f32_to_bytes(node.salience))?; + + Ok(()) +} + +pub fn read_node(db: &Db, id: Uuid) -> EngramResult> { + match db.get(node_key(id))? { + Some(bytes) => Ok(Some(bincode::deserialize(&bytes)?)), + None => Ok(None), + } +} + +/// Iterate over every node in the store. +pub fn scan_nodes(db: &Db) -> EngramResult> { + let prefix = b"nodes:"; + let mut nodes = Vec::new(); + for result in db.scan_prefix(prefix) { + let (_k, v) = result?; + let node: Node = bincode::deserialize(&v)?; + nodes.push(node); + } + Ok(nodes) +} + +// ── Edge storage ───────────────────────────────────────────────────────────── + +pub fn write_edge(db: &Db, edge: &Edge) -> EngramResult<()> { + let bytes = bincode::serialize(edge)?; + // Forward index: from → to + db.insert(edge_from_key(edge.from_id, edge.to_id), bytes.clone())?; + // Reverse index: to → from + db.insert(edge_to_key(edge.to_id, edge.from_id), bytes)?; + Ok(()) +} + +pub fn read_edges_from(db: &Db, from_id: Uuid) -> EngramResult> { + let prefix = format!("edges:from:{}:", from_id).into_bytes(); + read_edges_with_prefix(db, &prefix) +} + +pub fn read_edges_to(db: &Db, to_id: Uuid) -> EngramResult> { + let prefix = format!("edges:to:{}:", to_id).into_bytes(); + read_edges_with_prefix(db, &prefix) +} + +fn read_edges_with_prefix(db: &Db, prefix: &[u8]) -> EngramResult> { + let mut edges = Vec::new(); + for result in db.scan_prefix(prefix) { + let (_k, v) = result?; + let edge: Edge = bincode::deserialize(&v)?; + edges.push(edge); + } + Ok(edges) +} + +// ── Vector scan ─────────────────────────────────────────────────────────────── + +/// Read all stored (uuid, embedding) pairs. Used for flat cosine search. +pub fn scan_vectors(db: &Db) -> EngramResult)>> { + let prefix = b"vectors:"; + let mut out = Vec::new(); + for result in db.scan_prefix(prefix) { + let (k, v) = result?; + // key = "vectors:{uuid}" — slice off the prefix + let id_str = std::str::from_utf8(&k[prefix.len()..]) + .map_err(|e| EngramError::InvalidParam(e.to_string()))?; + let id = id_str + .parse::() + .map_err(|e| EngramError::InvalidParam(e.to_string()))?; + let floats = bytes_to_floats(&v); + out.push((id, floats)); + } + Ok(out) +} + +// ── Salience update ─────────────────────────────────────────────────────────── + +/// Overwrite the salience entry for a node without rewriting the full node blob. +pub fn write_salience(db: &Db, id: Uuid, salience: f32) -> EngramResult<()> { + db.insert(salience_key(id), f32_to_bytes(salience))?; + Ok(()) +} + +pub fn read_salience(db: &Db, id: Uuid) -> EngramResult> { + match db.get(salience_key(id))? { + Some(b) => Ok(Some(bytes_to_f32(&b))), + None => Ok(None), + } +} + +/// Count entries matching a key prefix. +pub fn count_prefix(db: &Db, prefix: &[u8]) -> EngramResult { + let mut n = 0usize; + for result in db.scan_prefix(prefix) { + result?; + n += 1; + } + Ok(n) +} + +// ── Byte encoding helpers ───────────────────────────────────────────────────── + +fn f32_to_bytes(v: f32) -> Vec { + v.to_le_bytes().to_vec() +} + +fn bytes_to_f32(b: &[u8]) -> f32 { + let arr: [u8; 4] = b[..4].try_into().unwrap_or([0u8; 4]); + f32::from_le_bytes(arr) +} + +fn floats_to_bytes(floats: &[f32]) -> Vec { + let mut out = Vec::with_capacity(floats.len() * 4); + for f in floats { + out.extend_from_slice(&f.to_le_bytes()); + } + out +} + +fn bytes_to_floats(bytes: &[u8]) -> Vec { + bytes + .chunks_exact(4) + .map(|c| f32::from_le_bytes(c.try_into().unwrap())) + .collect() +} diff --git a/engram/crates/engram-core/src/types.rs b/engram/crates/engram-core/src/types.rs new file mode 100644 index 0000000..8ee32a3 --- /dev/null +++ b/engram/crates/engram-core/src/types.rs @@ -0,0 +1,193 @@ +use serde::{Deserialize, Serialize}; +use uuid::Uuid; + +/// The functional role of a node in the memory graph. +/// +/// Different node types participate in different retrieval patterns: +/// - Memories and Events are time-anchored +/// - Concepts and Entities form the semantic backbone +/// - Processes encode procedural knowledge +/// - InternalState captures the system's own affective context +#[derive(Debug, Clone, PartialEq, Eq, Serialize, Deserialize)] +pub enum NodeType { + /// A specific remembered experience or observation + Memory, + /// An abstract idea, category, or semantic anchor + Concept, + /// A time-stamped occurrence in the world or in processing + Event, + /// A named thing — person, place, object, system + Entity, + /// A procedural pattern, workflow, or sequence of steps + Process, + /// An internal affective or motivational state + InternalState, +} + +/// Where in the memory hierarchy a node currently lives. +/// +/// Tiers model the brain's own stratified memory architecture. +/// Nodes migrate between tiers based on salience decay and reinforcement. +#[derive(Debug, Clone, PartialEq, Eq, Serialize, Deserialize)] +pub enum MemoryTier { + /// Hot working memory — the K most recently activated nodes. + /// Ultra-fast access. Evicted by recency when K is exceeded. + Working, + /// Episodic memory — time-ordered events and experiences. + /// Indexed chronologically; supports temporal traversal. + Episodic, + /// Semantic memory — the concept graph with weighted associations. + /// This is the long-term structural knowledge of the system. + Semantic, + /// Procedural memory — patterns, workflows, habits. + /// Retrieved by similarity to current task context. + Procedural, +} + +/// The typed relationship between two nodes. +/// +/// Relation types encode causal, temporal, hierarchical, and logical +/// structure into the graph itself — not just into metadata. +#[derive(Debug, Clone, PartialEq, Eq, Serialize, Deserialize)] +pub enum RelationType { + /// This node replaces or obsoletes another + Supersedes, + /// This node is a causal precursor to another + Causes, + /// This node hierarchically contains another + Contains, + /// This node cites or points to another as supporting context + References, + /// This node is in logical tension with another + Contradicts, + /// This node is a concrete instance of a more abstract node + Exemplifies, + /// Co-activation: firing this node tends to fire the other + Activates, + /// Temporal ordering: this node came before the other + TemporallyPrecedes, +} + +/// A node in the engram graph — the fundamental unit of stored memory. +/// +/// A node is not just a record. It is an activation site. Its embedding +/// is its semantic identity; its salience governs whether it surfaces +/// during retrieval; its activation history encodes its importance to +/// the system's ongoing cognition. +#[derive(Debug, Clone, Serialize, Deserialize)] +pub struct Node { + /// Stable unique identifier + pub id: Uuid, + /// Functional role in the memory system + pub node_type: NodeType, + /// Semantic vector — the node's position in meaning-space. + /// Cosine similarity to a query embedding drives spreading activation. + pub embedding: Vec, + /// Compressed raw content — the actual payload + pub content: Vec, + /// Unix milliseconds when the node was first created + pub created_at: i64, + /// Unix milliseconds when the node was last activated (read or touched) + pub last_activated: i64, + /// How many times the node has been activated + pub activation_count: u64, + /// Composite score: recency × frequency × importance. + /// Updated on every touch. Governs spreading activation priority. + pub salience: f32, + /// Which memory tier this node currently occupies + pub tier: MemoryTier, + /// Explicit importance, 0.0–1.0. Set by the caller; stable over time. + pub importance: f32, +} + +impl Node { + /// Construct a new node with sensible defaults. + pub fn new( + node_type: NodeType, + embedding: Vec, + content: Vec, + tier: MemoryTier, + importance: f32, + ) -> Self { + let now = now_ms(); + let importance = importance.clamp(0.0, 1.0); + // Creation counts as the first activation — activation_count starts at 1. + // This ensures a newly created node has non-zero salience from birth. + // (ln(1+1) = ln(2) ≈ 0.693, so salience ≈ importance × recency × 0.693) + let initial_count = 1u64; + let salience = crate::salience::compute_salience(importance, now, initial_count); + Self { + id: Uuid::new_v4(), + node_type, + embedding, + content, + created_at: now, + last_activated: now, + activation_count: initial_count, + salience, + tier, + importance, + } + } +} + +/// A node returned from spreading activation, annotated with how strongly +/// it was activated and how many hops from the seed set it is. +#[derive(Debug, Clone)] +pub struct ActivatedNode { + pub node: Node, + /// Activation strength at this node — product of path weights, + /// salience, and semantic similarity. Higher is more relevant. + pub activation_strength: f32, + /// Number of graph hops from the nearest seed node + pub hops: u8, +} + +/// A node returned from vector similarity search, annotated with its score. +#[derive(Debug, Clone)] +pub struct ScoredNode { + pub node: Node, + /// Cosine similarity to the query embedding, in [0.0, 1.0] + pub score: f32, +} + +/// An edge in the engram graph — a typed, weighted connection between nodes. +/// +/// Edge weights strengthen with co-activation (Hebbian learning). +/// The weight directly multiplies activation flow during spreading activation. +#[derive(Debug, Clone, Serialize, Deserialize)] +pub struct Edge { + pub id: Uuid, + pub from_id: Uuid, + pub to_id: Uuid, + pub relation: RelationType, + /// Connection strength, 0.0–1.0. Increases when both endpoints are + /// activated in close temporal proximity (long-term potentiation). + pub weight: f32, + pub created_at: i64, + /// Unix ms when this edge last carried activation + pub last_fired: i64, +} + +impl Edge { + pub fn new(from_id: Uuid, to_id: Uuid, relation: RelationType, weight: f32) -> Self { + let now = now_ms(); + Self { + id: Uuid::new_v4(), + from_id, + to_id, + relation, + weight: weight.clamp(0.0, 1.0), + created_at: now, + last_fired: now, + } + } +} + +/// Current wall time in Unix milliseconds. +pub fn now_ms() -> i64 { + std::time::SystemTime::now() + .duration_since(std::time::UNIX_EPOCH) + .expect("system clock before epoch") + .as_millis() as i64 +} diff --git a/engram/crates/engram-core/src/vector.rs b/engram/crates/engram-core/src/vector.rs new file mode 100644 index 0000000..7f890c0 --- /dev/null +++ b/engram/crates/engram-core/src/vector.rs @@ -0,0 +1,82 @@ +/// Vector similarity search over stored node embeddings. +/// +/// v0.1 uses a flat cosine scan — O(n) but correct and dependency-free. +/// For < 100k nodes this is adequate. Future versions will layer in HNSW +/// once the graph structure itself is validated. +/// +/// Cosine similarity between two vectors A and B: +/// cos(θ) = (A · B) / (|A| × |B|) +/// +/// We return 0.0 when either vector has zero norm (degenerate case). +use crate::error::{EngramError, EngramResult}; +use crate::storage; +use crate::types::{Node, ScoredNode}; +use sled::Db; +use uuid::Uuid; + +/// Compute the cosine similarity between two equal-length f32 slices. +/// +/// Returns a value in [-1.0, 1.0], where 1.0 means identical direction. +/// For normalized embeddings (unit vectors) the dot product alone is sufficient, +/// but we compute full cosine here to be robust to unnormalized inputs. +pub fn cosine_similarity(a: &[f32], b: &[f32]) -> f32 { + if a.len() != b.len() || a.is_empty() { + return 0.0; + } + let dot: f32 = a.iter().zip(b.iter()).map(|(x, y)| x * y).sum(); + let norm_a: f32 = a.iter().map(|x| x * x).sum::().sqrt(); + let norm_b: f32 = b.iter().map(|x| x * x).sum::().sqrt(); + if norm_a == 0.0 || norm_b == 0.0 { + return 0.0; + } + (dot / (norm_a * norm_b)).clamp(-1.0, 1.0) +} + +/// Search all stored embeddings for the `limit` closest nodes to `query`. +/// +/// This is a full scan. Every stored vector is loaded and scored. +/// Results are sorted descending by cosine similarity. +pub fn search_embedding( + db: &Db, + query: &[f32], + limit: usize, + // Loader that retrieves a Node by Uuid — avoids a circular dep on graph.rs + node_loader: impl Fn(Uuid) -> EngramResult>, +) -> EngramResult> { + let vectors = storage::scan_vectors(db)?; + let mut scored: Vec<(Uuid, f32)> = vectors + .iter() + .map(|(id, emb)| { + let sim = cosine_similarity(query, emb); + (*id, sim) + }) + .collect(); + + // Sort descending by score + scored.sort_by(|a, b| b.1.partial_cmp(&a.1).unwrap_or(std::cmp::Ordering::Equal)); + scored.truncate(limit); + + let mut results = Vec::with_capacity(scored.len()); + for (id, score) in scored { + if let Some(node) = node_loader(id)? { + results.push(ScoredNode { node, score }); + } + } + Ok(results) +} + +/// Retrieve the stored embedding for a single node by id. +/// Returns an error if the node has no stored vector (shouldn't happen in normal use). +pub fn get_embedding(db: &Db, id: Uuid) -> EngramResult> { + let key = storage::vector_key(id); + match db.get(key)? { + Some(bytes) => { + let floats: Vec = bytes + .chunks_exact(4) + .map(|c| f32::from_le_bytes(c.try_into().unwrap())) + .collect(); + Ok(floats) + } + None => Err(EngramError::NotFound(id)), + } +} diff --git a/engram/crates/engram-ffi/Cargo.toml b/engram/crates/engram-ffi/Cargo.toml new file mode 100644 index 0000000..62a6f60 --- /dev/null +++ b/engram/crates/engram-ffi/Cargo.toml @@ -0,0 +1,13 @@ +[package] +name = "engram-ffi" +version = "0.1.0" +edition = "2021" +description = "C FFI bindings for engram-core" +license = "MIT" + +[lib] +crate-type = ["cdylib", "staticlib"] + +[dependencies] +engram-core = { path = "../engram-core" } +uuid = { version = "1", features = ["v4", "serde"] } diff --git a/engram/crates/engram-ffi/src/lib.rs b/engram/crates/engram-ffi/src/lib.rs new file mode 100644 index 0000000..ce98979 --- /dev/null +++ b/engram/crates/engram-ffi/src/lib.rs @@ -0,0 +1,118 @@ +/// C FFI stubs for engram-core. +/// +/// These are minimal stubs for v0.1 — enough to link from Kotlin, TypeScript (via WASM +/// or Node native addon), and Go. Full binding generation will use cbindgen in v0.2. +/// +/// All pointers passed across the FFI boundary must remain valid for the duration of +/// the call. Strings are null-terminated UTF-8. The caller owns all returned heap memory +/// and must free it via the corresponding `engram_free_*` function. +/// +/// # Safety +/// All functions in this module are `unsafe` because they accept raw pointers. +/// Callers are responsible for ensuring pointer validity and correct lifetimes. +use engram_core::EngramDb; +use std::ffi::{CStr, CString}; +use std::os::raw::c_char; +use std::path::Path; + +/// Opaque handle to an open EngramDb instance. +pub struct EngramHandle { + db: EngramDb, +} + +/// Open an engram database at the given path. +/// +/// Returns a heap-allocated handle on success, or null on failure. +/// The caller must eventually call `engram_close` to free the handle. +/// +/// # Safety +/// `path` must be a valid, null-terminated UTF-8 string. +#[no_mangle] +pub unsafe extern "C" fn engram_open(path: *const c_char) -> *mut EngramHandle { + if path.is_null() { + return std::ptr::null_mut(); + } + let path_str = match CStr::from_ptr(path).to_str() { + Ok(s) => s, + Err(_) => return std::ptr::null_mut(), + }; + match EngramDb::open(Path::new(path_str)) { + Ok(db) => Box::into_raw(Box::new(EngramHandle { db })), + Err(_) => std::ptr::null_mut(), + } +} + +/// Close and free an engram database handle. +/// +/// After this call, `handle` is invalid and must not be used. +/// +/// # Safety +/// `handle` must have been returned by `engram_open` and not yet freed. +#[no_mangle] +pub unsafe extern "C" fn engram_close(handle: *mut EngramHandle) { + if !handle.is_null() { + drop(Box::from_raw(handle)); + } +} + +/// Return the number of nodes in the database. +/// +/// Returns -1 on error. +/// +/// # Safety +/// `handle` must be a valid, non-null pointer from `engram_open`. +#[no_mangle] +pub unsafe extern "C" fn engram_node_count(handle: *const EngramHandle) -> i64 { + if handle.is_null() { + return -1; + } + match (*handle).db.node_count() { + Ok(n) => n as i64, + Err(_) => -1, + } +} + +/// Return the number of edges in the database. +/// +/// Returns -1 on error. +/// +/// # Safety +/// `handle` must be a valid, non-null pointer from `engram_open`. +#[no_mangle] +pub unsafe extern "C" fn engram_edge_count(handle: *const EngramHandle) -> i64 { + if handle.is_null() { + return -1; + } + match (*handle).db.edge_count() { + Ok(n) => n as i64, + Err(_) => -1, + } +} + +/// Apply salience decay across all nodes. +/// +/// Returns the number of nodes updated, or -1 on error. +/// +/// # Safety +/// `handle` must be a valid, non-null pointer from `engram_open`. +#[no_mangle] +pub unsafe extern "C" fn engram_decay(handle: *mut EngramHandle, factor: f32) -> i64 { + if handle.is_null() { + return -1; + } + match (*handle).db.decay(factor) { + Ok(n) => n as i64, + Err(_) => -1, + } +} + +/// Free a C string returned by engram FFI functions. +/// +/// # Safety +/// `s` must have been allocated by an engram FFI function, not by the caller. +#[no_mangle] +pub unsafe extern "C" fn engram_free_string(s: *mut c_char) { + if !s.is_null() { + drop(CString::from_raw(s)); + } +} diff --git a/engram/examples/basic.rs b/engram/examples/basic.rs new file mode 100644 index 0000000..40fb436 --- /dev/null +++ b/engram/examples/basic.rs @@ -0,0 +1,224 @@ +/// Basic engram demonstration. +/// +/// This example builds a small memory graph, runs spreading activation, +/// performs a vector search, and shows salience decay in action. +/// +/// The nodes represent a tiny knowledge graph about the spreading activation +/// model itself — somewhat recursive, intentionally. +use engram_core::{ActivatedNode, Edge, EngramDb, MemoryTier, Node, NodeType, RelationType}; +use std::path::Path; + +fn main() -> Result<(), Box> { + // ── 1. Open database ────────────────────────────────────────────────────── + let db_path = Path::new("/tmp/engram-test"); + // Clean up any previous run so we start fresh + if db_path.exists() { + std::fs::remove_dir_all(db_path)?; + } + let db = EngramDb::open(db_path)?; + println!("Engram opened at {}\n", db_path.display()); + + // ── 2. Insert nodes ─────────────────────────────────────────────────────── + // + // We use 8-dimensional embeddings. In production these would come from a + // language model. Here they're hand-crafted to illustrate semantic proximity: + // the "activation" and "memory" cluster at [high, high, low, ...] + // while "forgetting" and "decay" cluster at [low, low, high, ...] + + let node0 = Node::new( + NodeType::Concept, + vec![0.9, 0.8, 0.1, 0.2, 0.7, 0.3, 0.1, 0.4], + b"Spreading activation: memory retrieval as propagation through weighted graph".to_vec(), + MemoryTier::Semantic, + 0.95, + ); + + let node1 = Node::new( + NodeType::Concept, + vec![0.8, 0.9, 0.2, 0.1, 0.6, 0.4, 0.2, 0.3], + b"Long-term potentiation: synaptic strengthening through co-activation".to_vec(), + MemoryTier::Semantic, + 0.90, + ); + + let node2 = Node::new( + NodeType::Memory, + vec![0.7, 0.6, 0.3, 0.4, 0.8, 0.2, 0.1, 0.5], + b"Hebbian learning: neurons that fire together wire together".to_vec(), + MemoryTier::Episodic, + 0.85, + ); + + let node3 = Node::new( + NodeType::Concept, + vec![0.6, 0.7, 0.4, 0.3, 0.9, 0.1, 0.2, 0.6], + b"Associative memory: retrieval by pattern completion, not address lookup".to_vec(), + MemoryTier::Semantic, + 0.88, + ); + + let node4 = Node::new( + NodeType::Process, + vec![0.2, 0.3, 0.8, 0.9, 0.1, 0.7, 0.6, 0.2], + b"Salience decay: forgetting as adaptive pruning, not failure".to_vec(), + MemoryTier::Procedural, + 0.75, + ); + + let node5 = Node::new( + NodeType::Event, + vec![0.3, 0.2, 0.7, 0.8, 0.2, 0.6, 0.7, 0.1], + b"Memory consolidation during sleep: hippocampal replay to neocortex".to_vec(), + MemoryTier::Episodic, + 0.70, + ); + + let id0 = db.put_node(node0)?; + let id1 = db.put_node(node1)?; + let id2 = db.put_node(node2)?; + let id3 = db.put_node(node3)?; + let id4 = db.put_node(node4)?; + let id5 = db.put_node(node5)?; + + println!("Inserted {} nodes", db.node_count()?); + println!(" [0] Spreading activation concept (seed)"); + println!(" [1] Long-term potentiation"); + println!(" [2] Hebbian learning"); + println!(" [3] Associative memory"); + println!(" [4] Salience decay (procedural)"); + println!(" [5] Memory consolidation (episodic)"); + println!(); + + // ── 3. Create edges ─────────────────────────────────────────────────────── + // + // Edge weights model associative strength. Strong weights (0.9) mean these + // concepts reliably co-activate. Weaker weights mean looser association. + + // Spreading activation Causes long-term potentiation (strong causal link) + db.put_edge(Edge::new(id0, id1, RelationType::Causes, 0.9))?; + // LTP is Referenced by Hebbian learning + db.put_edge(Edge::new(id1, id2, RelationType::References, 0.85))?; + // Spreading activation Activates associative memory + db.put_edge(Edge::new(id0, id3, RelationType::Activates, 0.88))?; + // Hebbian learning Exemplifies associative memory + db.put_edge(Edge::new(id2, id3, RelationType::Exemplifies, 0.80))?; + // Salience decay Supersedes naive forgetting + db.put_edge(Edge::new(id4, id5, RelationType::TemporallyPrecedes, 0.65))?; + // LTP TemporallyPrecedes memory consolidation + db.put_edge(Edge::new(id1, id5, RelationType::TemporallyPrecedes, 0.72))?; + + println!("Inserted {} edges", db.edge_count()?); + println!(" node0 --[Causes]--> node1"); + println!(" node1 --[References]--> node2"); + println!(" node0 --[Activates]--> node3"); + println!(" node2 --[Exemplifies]--> node3"); + println!(" node4 --[TemporallyPrecedes]--> node5"); + println!(" node1 --[TemporallyPrecedes]--> node5"); + println!(); + + // ── 4. Spreading activation ─────────────────────────────────────────────── + // + // Seed: node0 (spreading activation concept) + // Query embedding: similar to node3 (associative memory) — high in dims 4,5 + // This should surface node3 strongly and pull in node2 via the Hebbian path. + + let query_embedding = vec![0.65, 0.72, 0.35, 0.28, 0.92, 0.12, 0.18, 0.58]; + + println!("=== Spreading Activation ==="); + println!("Seed: node0 (spreading activation concept)"); + println!("Query: similar to node3 (associative memory)"); + println!("Max depth: 3 hops, returning top 10"); + println!(); + + let activated: Vec = db.activate(&[id0], &query_embedding, 3, 10)?; + + if activated.is_empty() { + println!(" (no nodes activated — check salience values)"); + } else { + for a in &activated { + let content = String::from_utf8_lossy(&a.node.content); + // Truncate content for display + let display = if content.len() > 60 { + format!("{}...", &content[..60]) + } else { + content.to_string() + }; + println!( + " strength={:.4} hops={} salience={:.4} tier={:?}", + a.activation_strength, a.hops, a.node.salience, a.node.tier + ); + println!(" \"{}\"", display); + } + } + println!(); + + // ── 5. Vector similarity search ─────────────────────────────────────────── + // + // Pure cosine scan: no graph structure, just embedding proximity. + // Should return nodes with embeddings most similar to the query. + + println!("=== Vector Similarity Search (top 3) ==="); + println!("Query: associative memory embedding"); + println!(); + + let scored = db.search_embedding(&query_embedding, 3)?; + for s in &scored { + let content = String::from_utf8_lossy(&s.node.content); + let display = if content.len() > 60 { + format!("{}...", &content[..60]) + } else { + content.to_string() + }; + println!( + " cosine={:.4} tier={:?} type={:?}", + s.score, s.node.tier, s.node.node_type + ); + println!(" \"{}\"", display); + } + println!(); + + // ── 6. Node and edge counts ─────────────────────────────────────────────── + + println!("=== Database Statistics ==="); + println!(" Nodes: {}", db.node_count()?); + println!(" Edges: {}", db.edge_count()?); + println!(); + + // ── 7. Salience decay ───────────────────────────────────────────────────── + // + // Apply 5% decay to all node saliences. This simulates the passage of time. + // Nodes that haven't been activated recently become less salient, + // modeling the adaptive nature of forgetting. + + println!("=== Salience Decay (factor=0.95) ==="); + let updated = db.decay(0.95)?; + println!(" Updated {} nodes", updated); + println!(); + + // Show salience before/after for a sample node + if let Some(n) = db.get_node(id0)? { + println!( + " node0 salience after decay: {:.6}", + n.salience + ); + } + + // Show traversal from node0 + println!(); + println!("=== Graph Traversal from node0 (depth=2) ==="); + let reachable = db.traverse(id0, None, 2)?; + println!(" Reachable nodes (any relation, max 2 hops): {}", reachable.len()); + for n in &reachable { + let content = String::from_utf8_lossy(&n.content); + let display = if content.len() > 55 { + format!("{}...", &content[..55]) + } else { + content.to_string() + }; + println!(" [{:?}] \"{}\"", n.tier, display); + } + + println!(); + println!("Done. Engram v0.1."); + Ok(()) +} From 2454c83e82a522a476e3f6ea6b590c24bfe1f439 Mon Sep 17 00:00:00 2001 From: Will Anderson Date: Mon, 27 Apr 2026 16:00:47 -0500 Subject: [PATCH 02/18] feat: HNSW index, consolidation engine, Kotlin/TS/Go bindings, SQLite migration connector MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit - vector.rs: replace flat O(n) scan with instant-distance HNSW for stores >= 100 nodes; flat scan retained as fallback for small graphs; dirty-flag persistence in sled triggers index rebuild only when nodes are added - consolidation.rs: Episodic → Semantic promotion based on activation_count and salience_floor thresholds; global decay pass after each cycle; ConsolidationConfig + ConsolidationReport types; 8 tests - migration.rs: reads Neuron SQLite (memory_nodes, knowledge_entries, graph_edges) and writes to Engram sled; placeholder unit-vector embeddings with TODO for ONNX; 5 tests including full in-memory DB roundtrip - crates/engram-migrate: CLI binary (engram-migrate --sqlite / --output) - crates/engram-jni: JNI cdylib exposing open/close/put_node/get_node/ activate/search_embedding/touch/decay/node_count/edge_count via Java_ai_neuron_engram_EngramDb_* entry points; 6 tests - bindings/kotlin: EngramDb.kt (AutoCloseable JNI wrapper), EngramNode, EngramEdge, ActivatedNode, EngramTypes; build.gradle.kts; settings.gradle.kts - bindings/typescript: engram-wasm crate (wasm-bindgen, serde-wasm-bindgen); WasmEngramDb with in-memory backend (sled not available in WASM); TypeScript wrapper (index.ts, types.ts, package.json, tsconfig.json) - bindings/go: engram.go (CGo wrapper), engram.h (C header), engram_test.go (4 tests covering open/close/put_node/get_node/node_count/decay); go.mod - engram-core: wasm feature gate for in-memory backend; mem_storage.rs; activation.activate_mem for WASM path; Node::with_id helper; salience.rs doctest fixed (text block) - examples/basic.rs: consolidation section added - examples/migrate.rs: migration API demonstration Build: cargo build --workspace -- zero warnings, zero errors Tests: 38 pass (25 engram-core + 7 engram-ffi + 6 engram-jni) --- engram/Cargo.lock | 549 ++++++++++++++++- engram/Cargo.toml | 13 +- engram/bindings/go/engram.go | 197 +++++++ engram/bindings/go/engram.h | 70 +++ engram/bindings/go/engram_test.go | 130 ++++ engram/bindings/go/go.mod | 3 + engram/bindings/kotlin/build.gradle.kts | 33 ++ engram/bindings/kotlin/settings.gradle.kts | 1 + .../kotlin/ai/neuron/engram/ActivatedNode.kt | 13 + .../main/kotlin/ai/neuron/engram/EngramDb.kt | 153 +++++ .../kotlin/ai/neuron/engram/EngramEdge.kt | 14 + .../kotlin/ai/neuron/engram/EngramNode.kt | 38 ++ .../kotlin/ai/neuron/engram/EngramTypes.kt | 31 + engram/bindings/typescript/Cargo.toml | 24 + engram/bindings/typescript/package.json | 21 + engram/bindings/typescript/src/index.ts | 125 ++++ engram/bindings/typescript/src/lib.rs | 311 ++++++++++ engram/bindings/typescript/src/types.ts | 49 ++ engram/bindings/typescript/tsconfig.json | 18 + engram/crates/engram-core/Cargo.toml | 15 +- engram/crates/engram-core/src/activation.rs | 82 ++- .../crates/engram-core/src/consolidation.rs | 307 ++++++++++ engram/crates/engram-core/src/db.rs | 558 +++++++++++++----- engram/crates/engram-core/src/lib.rs | 7 + engram/crates/engram-core/src/mem_storage.rs | 99 ++++ engram/crates/engram-core/src/migration.rs | 420 +++++++++++++ engram/crates/engram-core/src/salience.rs | 2 +- engram/crates/engram-core/src/types.rs | 6 + engram/crates/engram-core/src/vector.rs | 310 +++++++++- engram/crates/engram-ffi/Cargo.toml | 3 + engram/crates/engram-ffi/src/lib.rs | 433 ++++++++++++-- engram/crates/engram-jni/Cargo.toml | 19 + engram/crates/engram-jni/src/lib.rs | 496 ++++++++++++++++ engram/crates/engram-migrate/Cargo.toml | 13 + engram/crates/engram-migrate/src/main.rs | 105 ++++ engram/examples/basic.rs | 46 +- engram/examples/migrate.rs | 96 +++ 37 files changed, 4573 insertions(+), 237 deletions(-) create mode 100644 engram/bindings/go/engram.go create mode 100644 engram/bindings/go/engram.h create mode 100644 engram/bindings/go/engram_test.go create mode 100644 engram/bindings/go/go.mod create mode 100644 engram/bindings/kotlin/build.gradle.kts create mode 100644 engram/bindings/kotlin/settings.gradle.kts create mode 100644 engram/bindings/kotlin/src/main/kotlin/ai/neuron/engram/ActivatedNode.kt create mode 100644 engram/bindings/kotlin/src/main/kotlin/ai/neuron/engram/EngramDb.kt create mode 100644 engram/bindings/kotlin/src/main/kotlin/ai/neuron/engram/EngramEdge.kt create mode 100644 engram/bindings/kotlin/src/main/kotlin/ai/neuron/engram/EngramNode.kt create mode 100644 engram/bindings/kotlin/src/main/kotlin/ai/neuron/engram/EngramTypes.kt create mode 100644 engram/bindings/typescript/Cargo.toml create mode 100644 engram/bindings/typescript/package.json create mode 100644 engram/bindings/typescript/src/index.ts create mode 100644 engram/bindings/typescript/src/lib.rs create mode 100644 engram/bindings/typescript/src/types.ts create mode 100644 engram/bindings/typescript/tsconfig.json create mode 100644 engram/crates/engram-core/src/consolidation.rs create mode 100644 engram/crates/engram-core/src/mem_storage.rs create mode 100644 engram/crates/engram-core/src/migration.rs create mode 100644 engram/crates/engram-jni/Cargo.toml create mode 100644 engram/crates/engram-jni/src/lib.rs create mode 100644 engram/crates/engram-migrate/Cargo.toml create mode 100644 engram/crates/engram-migrate/src/main.rs create mode 100644 engram/examples/migrate.rs diff --git a/engram/Cargo.lock b/engram/Cargo.lock index 26e5fdb..c6ece74 100644 --- a/engram/Cargo.lock +++ b/engram/Cargo.lock @@ -2,12 +2,30 @@ # It is not intended for manual editing. version = 4 +[[package]] +name = "ahash" +version = "0.8.12" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "5a15f179cd60c4584b8a8c596927aadc462e27f2ca70c04e0071964a73ba7a75" +dependencies = [ + "cfg-if", + "once_cell", + "version_check", + "zerocopy", +] + [[package]] name = "anyhow" version = "1.0.102" source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "7f202df86484c868dbad7eaa557ef785d5c66295e41b460ef922eca0723b842c" +[[package]] +name = "autocfg" +version = "1.5.0" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "c08606f8c3cbf4ce6ec8e28fb0014a2c086708fe954eaa885384a6165172e7e8" + [[package]] name = "bincode" version = "1.3.3" @@ -41,12 +59,34 @@ version = "1.5.0" source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "1fd0f2584146f6f2ef48085050886acf353beff7305ebd1ae69500e27c67f64b" +[[package]] +name = "bytes" +version = "1.11.1" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "1e748733b7cbc798e1434b6ac524f0c1ff2ab456fe201501e6497c8417a4fc33" + +[[package]] +name = "cesu8" +version = "1.1.0" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "6d43a04d8753f35258c91f8ec639f792891f748a1edbd759cf1dcea3382ad83c" + [[package]] name = "cfg-if" version = "1.0.4" source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "9330f8b2ff13f34540b44e946ef35111825727b38d33286ef986142615121801" +[[package]] +name = "combine" +version = "4.6.7" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "ba5a308b75df32fe02788e748662718f03fde005016435c444eea572398219fd" +dependencies = [ + "bytes", + "memchr", +] + [[package]] name = "crc32fast" version = "1.5.0" @@ -56,6 +96,16 @@ dependencies = [ "cfg-if", ] +[[package]] +name = "crossbeam-deque" +version = "0.8.6" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "9dd111b7b7f7d55b72c0a6ae361660ee5853c9af73f70c3c2ef6858b950e2e51" +dependencies = [ + "crossbeam-epoch", + "crossbeam-utils", +] + [[package]] name = "crossbeam-epoch" version = "0.9.18" @@ -71,21 +121,30 @@ version = "0.8.21" source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "d0a5c400df2834b80a4c3327b3aad3a4c4cd4de0629063962b03235697506a28" +[[package]] +name = "either" +version = "1.15.0" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "48c757948c5ede0e46177b7add2e67155f70e33c07fea8284df6576da70b3719" + [[package]] name = "engram" -version = "0.1.0" +version = "0.1.1" dependencies = [ "engram-core", ] [[package]] name = "engram-core" -version = "0.1.0" +version = "0.1.1" dependencies = [ "anyhow", "bincode", + "instant-distance", + "rusqlite", "serde", "sled", + "tempfile", "thiserror", "uuid", ] @@ -95,15 +154,62 @@ name = "engram-ffi" version = "0.1.0" dependencies = [ "engram-core", + "tempfile", "uuid", ] +[[package]] +name = "engram-jni" +version = "0.1.0" +dependencies = [ + "engram-core", + "jni", + "serde_json", + "tempfile", + "uuid", +] + +[[package]] +name = "engram-migrate" +version = "0.1.0" +dependencies = [ + "engram-core", +] + [[package]] name = "equivalent" version = "1.0.2" source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "877a4ace8713b0bcf2a4e7eec82529c029f1d0619886d18145fea96c3ffe5c0f" +[[package]] +name = "errno" +version = "0.3.14" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "39cab71617ae0d63f51a36d69f866391735b51691dbda63cf6f96d042b63efeb" +dependencies = [ + "libc", + "windows-sys 0.61.2", +] + +[[package]] +name = "fallible-iterator" +version = "0.3.0" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "2acce4a10f12dc2fb14a218589d4f1f62ef011b2d0cc4b3cb1bba8e94da14649" + +[[package]] +name = "fallible-streaming-iterator" +version = "0.1.9" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "7360491ce676a36bf9bb3c56c1aa791658183a54d2744120f27285738d90465a" + +[[package]] +name = "fastrand" +version = "2.4.1" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "9f1f227452a390804cdb637b74a86990f2a7d7ba4b7d5693aac9b4dd6defd8d6" + [[package]] name = "foldhash" version = "0.1.5" @@ -129,6 +235,17 @@ dependencies = [ "byteorder", ] +[[package]] +name = "getrandom" +version = "0.2.17" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "ff2abc00be7fca6ebc474524697ae276ad847ad0a6b3faa4bcb027e9a4614ad0" +dependencies = [ + "cfg-if", + "libc", + "wasi", +] + [[package]] name = "getrandom" version = "0.4.2" @@ -142,6 +259,15 @@ dependencies = [ "wasip3", ] +[[package]] +name = "hashbrown" +version = "0.14.5" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "e5274423e17b7c9fc20b6e7e208532f9b19825d82dfd615708b70edd83df41f1" +dependencies = [ + "ahash", +] + [[package]] name = "hashbrown" version = "0.15.5" @@ -157,12 +283,27 @@ version = "0.17.0" source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "4f467dd6dccf739c208452f8014c75c18bb8301b050ad1cfb27153803edb0f51" +[[package]] +name = "hashlink" +version = "0.9.1" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "6ba4ff7128dee98c7dc9794b6a411377e1404dba1c97deb8d1a55297bd25d8af" +dependencies = [ + "hashbrown 0.14.5", +] + [[package]] name = "heck" version = "0.5.0" source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "2304e00983f87ffb38b55b444b5e3b60a884b5d30c0fca7d82fe33449bbe55ea" +[[package]] +name = "hermit-abi" +version = "0.5.2" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "fc0fef456e4baa96da950455cd02c081ca953b141298e41db3fc7e36b1da849c" + [[package]] name = "id-arena" version = "2.3.0" @@ -190,12 +331,71 @@ dependencies = [ "cfg-if", ] +[[package]] +name = "instant-distance" +version = "0.6.1" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "8c619cdaa30bb84088963968bee12a45ea5fbbf355f2c021bcd15589f5ca494a" +dependencies = [ + "num_cpus", + "ordered-float", + "parking_lot 0.12.5", + "rand", + "rayon", + "serde", + "serde-big-array", +] + [[package]] name = "itoa" version = "1.0.18" source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "8f42a60cbdf9a97f5d2305f08a87dc4e09308d1276d28c869c684d7777685682" +[[package]] +name = "jni" +version = "0.21.1" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "1a87aa2bb7d2af34197c04845522473242e1aa17c12f4935d5856491a7fb8c97" +dependencies = [ + "cesu8", + "cfg-if", + "combine", + "jni-sys 0.3.1", + "log", + "thiserror", + "walkdir", + "windows-sys 0.45.0", +] + +[[package]] +name = "jni-sys" +version = "0.3.1" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "41a652e1f9b6e0275df1f15b32661cf0d4b78d4d87ddec5e0c3c20f097433258" +dependencies = [ + "jni-sys 0.4.1", +] + +[[package]] +name = "jni-sys" +version = "0.4.1" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "c6377a88cb3910bee9b0fa88d4f42e1d2da8e79915598f65fb0c7ee14c878af2" +dependencies = [ + "jni-sys-macros", +] + +[[package]] +name = "jni-sys-macros" +version = "0.4.1" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "38c0b942f458fe50cdac086d2f946512305e5631e720728f2a61aabcd47a6264" +dependencies = [ + "quote", + "syn", +] + [[package]] name = "js-sys" version = "0.3.95" @@ -218,6 +418,22 @@ version = "0.2.186" source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "68ab91017fe16c622486840e4c83c9a37afeff978bd239b5293d61ece587de66" +[[package]] +name = "libsqlite3-sys" +version = "0.28.0" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "0c10584274047cb335c23d3e61bcef8e323adae7c5c8c760540f73610177fc3f" +dependencies = [ + "pkg-config", + "vcpkg", +] + +[[package]] +name = "linux-raw-sys" +version = "0.12.1" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "32a66949e030da00e8c7d4434b251670a91556f4144941d37452769c25d58a53" + [[package]] name = "lock_api" version = "0.4.14" @@ -239,12 +455,40 @@ version = "2.8.0" source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "f8ca58f447f06ed17d5fc4043ce1b10dd205e060fb3ce5b979b8ed8e59ff3f79" +[[package]] +name = "num-traits" +version = "0.2.19" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "071dfc062690e90b734c0b2273ce72ad0ffa95f0c74596bc250dcfd960262841" +dependencies = [ + "autocfg", +] + +[[package]] +name = "num_cpus" +version = "1.17.0" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "91df4bbde75afed763b708b7eee1e8e7651e02d97f6d5dd763e89367e957b23b" +dependencies = [ + "hermit-abi", + "libc", +] + [[package]] name = "once_cell" version = "1.21.4" source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "9f7c3e4beb33f85d45ae3e3a1792185706c8e16d043238c593331cc7cd313b50" +[[package]] +name = "ordered-float" +version = "3.9.2" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "f1e1c390732d15f1d48471625cd92d154e66db2c56645e29a9cd26f4699f72dc" +dependencies = [ + "num-traits", +] + [[package]] name = "parking_lot" version = "0.11.2" @@ -253,7 +497,17 @@ checksum = "7d17b78036a60663b797adeaee46f5c9dfebb86948d1255007a1d6be0271ff99" dependencies = [ "instant", "lock_api", - "parking_lot_core", + "parking_lot_core 0.8.6", +] + +[[package]] +name = "parking_lot" +version = "0.12.5" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "93857453250e3077bd71ff98b6a65ea6621a19bb0f559a85248955ac12c45a1a" +dependencies = [ + "lock_api", + "parking_lot_core 0.9.12", ] [[package]] @@ -265,11 +519,39 @@ dependencies = [ "cfg-if", "instant", "libc", - "redox_syscall", + "redox_syscall 0.2.16", "smallvec", "winapi", ] +[[package]] +name = "parking_lot_core" +version = "0.9.12" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "2621685985a2ebf1c516881c026032ac7deafcda1a2c9b7850dc81e3dfcb64c1" +dependencies = [ + "cfg-if", + "libc", + "redox_syscall 0.5.18", + "smallvec", + "windows-link", +] + +[[package]] +name = "pkg-config" +version = "0.3.33" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "19f132c84eca552bf34cab8ec81f1c1dcc229b811638f9d283dceabe58c5569e" + +[[package]] +name = "ppv-lite86" +version = "0.2.21" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "85eae3c4ed2f50dcfe72643da4befc30deadb458a9b590d720cde2f2b1e97da9" +dependencies = [ + "zerocopy", +] + [[package]] name = "prettyplease" version = "0.2.37" @@ -304,6 +586,56 @@ version = "6.0.0" source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "f8dcc9c7d52a811697d2151c701e0d08956f92b0e24136cf4cf27b57a6a0d9bf" +[[package]] +name = "rand" +version = 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= "1.13.0" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "22e18b0f0062d30d4230b2e85ff77fdfe4326feb054b9783a3460d8435c8ab91" +dependencies = [ + "crossbeam-deque", + "crossbeam-utils", +] + [[package]] name = "redox_syscall" version = "0.2.16" @@ -313,12 +645,57 @@ dependencies = [ "bitflags 1.3.2", ] +[[package]] +name = "redox_syscall" +version = "0.5.18" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "ed2bf2547551a7053d6fdfafda3f938979645c44812fbfcda098faae3f1a362d" +dependencies = [ + "bitflags 2.11.1", +] + +[[package]] +name = "rusqlite" +version = "0.31.0" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "b838eba278d213a8beaf485bd313fd580ca4505a00d5871caeb1457c55322cae" +dependencies = [ + "bitflags 2.11.1", + "fallible-iterator", + "fallible-streaming-iterator", + "hashlink", + "libsqlite3-sys", + "smallvec", +] + +[[package]] +name = "rustix" +version = "1.1.4" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "b6fe4565b9518b83ef4f91bb47ce29620ca828bd32cb7e408f0062e9930ba190" +dependencies = [ + "bitflags 2.11.1", + "errno", + "libc", + "linux-raw-sys", + "windows-sys 0.61.2", +] + [[package]] name = "rustversion" version = "1.0.22" source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "b39cdef0fa800fc44525c84ccb54a029961a8215f9619753635a9c0d2538d46d" +[[package]] +name = "same-file" +version = "1.0.6" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "93fc1dc3aaa9bfed95e02e6eadabb4baf7e3078b0bd1b4d7b6b0b68378900502" +dependencies = [ + "winapi-util", +] + [[package]] name = "scopeguard" version = "1.2.0" @@ -341,6 +718,15 @@ dependencies = [ "serde_derive", ] +[[package]] +name = "serde-big-array" +version = "0.5.1" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "11fc7cc2c76d73e0f27ee52abbd64eec84d46f370c88371120433196934e4b7f" +dependencies = [ + "serde", +] + [[package]] name = "serde_core" version = "1.0.228" @@ -387,7 +773,7 @@ dependencies = [ "fxhash", "libc", "log", - "parking_lot", + "parking_lot 0.11.2", ] [[package]] @@ -407,6 +793,19 @@ dependencies = [ "unicode-ident", ] +[[package]] +name = "tempfile" +version = "3.27.0" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "32497e9a4c7b38532efcdebeef879707aa9f794296a4f0244f6f69e9bc8574bd" +dependencies = [ + "fastrand", + "getrandom 0.4.2", + "once_cell", + "rustix", + "windows-sys 0.61.2", +] + [[package]] name = "thiserror" version = "1.0.69" @@ -445,12 +844,40 @@ version = "1.23.1" source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "ddd74a9687298c6858e9b88ec8935ec45d22e8fd5e6394fa1bd4e99a87789c76" dependencies = [ - "getrandom", + "getrandom 0.4.2", "js-sys", "serde_core", "wasm-bindgen", ] +[[package]] +name = "vcpkg" +version = "0.2.15" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "accd4ea62f7bb7a82fe23066fb0957d48ef677f6eeb8215f372f52e48bb32426" + +[[package]] +name = "version_check" +version = "0.9.5" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "0b928f33d975fc6ad9f86c8f283853ad26bdd5b10b7f1542aa2fa15e2289105a" + +[[package]] +name = "walkdir" +version = "2.5.0" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "29790946404f91d9c5d06f9874efddea1dc06c5efe94541a7d6863108e3a5e4b" +dependencies = [ + "same-file", + "winapi-util", +] + +[[package]] +name = "wasi" +version = "0.11.1+wasi-snapshot-preview1" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "ccf3ec651a847eb01de73ccad15eb7d99f80485de043efb2f370cd654f4ea44b" + [[package]] name = "wasip2" version = "1.0.3+wasi-0.2.9" @@ -564,12 +991,102 @@ version = "0.4.0" source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "ac3b87c63620426dd9b991e5ce0329eff545bccbbb34f3be09ff6fb6ab51b7b6" +[[package]] +name = "winapi-util" +version = "0.1.11" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "c2a7b1c03c876122aa43f3020e6c3c3ee5c05081c9a00739faf7503aeba10d22" +dependencies = [ + "windows-sys 0.61.2", +] + [[package]] name = "winapi-x86_64-pc-windows-gnu" version = "0.4.0" source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "712e227841d057c1ee1cd2fb22fa7e5a5461ae8e48fa2ca79ec42cfc1931183f" +[[package]] +name = "windows-link" +version = "0.2.1" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "f0805222e57f7521d6a62e36fa9163bc891acd422f971defe97d64e70d0a4fe5" + +[[package]] +name = "windows-sys" +version = "0.45.0" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "75283be5efb2831d37ea142365f009c02ec203cd29a3ebecbc093d52315b66d0" +dependencies = [ + "windows-targets", +] + +[[package]] +name = "windows-sys" +version = "0.61.2" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "ae137229bcbd6cdf0f7b80a31df61766145077ddf49416a728b02cb3921ff3fc" +dependencies = [ + "windows-link", +] + +[[package]] +name = "windows-targets" +version = "0.42.2" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "8e5180c00cd44c9b1c88adb3693291f1cd93605ded80c250a75d472756b4d071" +dependencies = [ + "windows_aarch64_gnullvm", + "windows_aarch64_msvc", + "windows_i686_gnu", + "windows_i686_msvc", + "windows_x86_64_gnu", + "windows_x86_64_gnullvm", + "windows_x86_64_msvc", +] + +[[package]] +name = "windows_aarch64_gnullvm" +version = "0.42.2" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "597a5118570b68bc08d8d59125332c54f1ba9d9adeedeef5b99b02ba2b0698f8" + +[[package]] +name = "windows_aarch64_msvc" +version = "0.42.2" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "e08e8864a60f06ef0d0ff4ba04124db8b0fb3be5776a5cd47641e942e58c4d43" + +[[package]] +name = "windows_i686_gnu" +version = "0.42.2" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "c61d927d8da41da96a81f029489353e68739737d3beca43145c8afec9a31a84f" + +[[package]] +name = "windows_i686_msvc" +version = "0.42.2" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "44d840b6ec649f480a41c8d80f9c65108b92d89345dd94027bfe06ac444d1060" + +[[package]] +name = "windows_x86_64_gnu" +version = "0.42.2" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "8de912b8b8feb55c064867cf047dda097f92d51efad5b491dfb98f6bbb70cb36" + +[[package]] +name = "windows_x86_64_gnullvm" +version = "0.42.2" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "26d41b46a36d453748aedef1486d5c7a85db22e56aff34643984ea85514e94a3" + +[[package]] +name = "windows_x86_64_msvc" +version = "0.42.2" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "9aec5da331524158c6d1a4ac0ab1541149c0b9505fde06423b02f5ef0106b9f0" + [[package]] name = "wit-bindgen" version = "0.51.0" @@ -664,6 +1181,26 @@ dependencies = [ "wasmparser", ] +[[package]] +name = "zerocopy" +version = "0.8.48" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "eed437bf9d6692032087e337407a86f04cd8d6a16a37199ed57949d415bd68e9" +dependencies = [ + "zerocopy-derive", +] + +[[package]] +name = "zerocopy-derive" +version = "0.8.48" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "70e3cd084b1788766f53af483dd21f93881ff30d7320490ec3ef7526d203bad4" +dependencies = [ + "proc-macro2", + "quote", + "syn", +] + [[package]] name = "zmij" version = "1.0.21" diff --git a/engram/Cargo.toml b/engram/Cargo.toml index 6f253f4..f0c64c9 100644 --- a/engram/Cargo.toml +++ b/engram/Cargo.toml @@ -3,6 +3,10 @@ resolver = "2" members = [ "crates/engram-core", "crates/engram-ffi", + "crates/engram-jni", + "crates/engram-migrate", + # engram-wasm is in bindings/ and compiled separately via wasm-pack + # (wasm targets can't be in the same workspace build as native targets) ] # Workspace-level example that depends on engram-core. @@ -11,10 +15,17 @@ members = [ name = "basic" path = "examples/basic.rs" +[[example]] +name = "migrate" +path = "examples/migrate.rs" + [package] name = "engram" -version = "0.1.0" +version = "0.1.1" edition = "2021" +[features] +migration = ["engram-core/migration"] + [dependencies] engram-core = { path = "crates/engram-core" } diff --git a/engram/bindings/go/engram.go b/engram/bindings/go/engram.go new file mode 100644 index 0000000..94d1fb8 --- /dev/null +++ b/engram/bindings/go/engram.go @@ -0,0 +1,197 @@ +// Package engram provides Go bindings for the Engram memory substrate via CGo. +// +// Before using, build the shared library: +// +// cargo build --package engram-ffi --release +// +// Then either set LD_LIBRARY_PATH / DYLD_LIBRARY_PATH to the directory +// containing libengram_ffi.so/.dylib, or copy the library to a standard path. +// +// The LDFLAGS below assume you run `go build` from this directory and the +// Rust workspace is two levels up (../../target/release). +package engram + +/* +#cgo LDFLAGS: -L../../target/release -lengram_ffi +#include "engram.h" +#include +*/ +import "C" +import ( + "encoding/json" + "errors" + "fmt" + "unsafe" +) + +// ── Types ───────────────────────────────────────────────────────────────────── + +// DB is a handle to an open Engram database. +type DB struct { + ptr *C.EngramHandle +} + +// Node mirrors the Rust Node struct. +type Node struct { + ID string `json:"id"` + Content string `json:"content"` + NodeType string `json:"node_type"` + Tier string `json:"tier"` + Salience float32 `json:"salience"` + Importance float32 `json:"importance"` + ActivationCount uint64 `json:"activation_count"` + Embedding []float32 `json:"embedding"` +} + +// NodeInput is used when creating a new node. +type NodeInput struct { + Content string `json:"content"` + NodeType string `json:"node_type,omitempty"` + Tier string `json:"tier,omitempty"` + Importance float32 `json:"importance,omitempty"` + Embedding []float32 `json:"embedding"` +} + +// ActivatedNode is a node returned from spreading activation. +type ActivatedNode struct { + Node Node `json:"node"` + ActivationStrength float32 `json:"activation_strength"` + Hops uint8 `json:"hops"` +} + +// ActivateRequest is the JSON payload sent to engram_activate. +type activateRequest struct { + Seeds []string `json:"seeds"` + QueryEmbedding []float32 `json:"query_embedding"` + MaxDepth uint8 `json:"max_depth"` + Limit int `json:"limit"` +} + +// ── Lifecycle ───────────────────────────────────────────────────────────────── + +// Open opens or creates an Engram database at the given path. +func Open(path string) (*DB, error) { + cpath := C.CString(path) + defer C.free(unsafe.Pointer(cpath)) + + ptr := C.engram_open(cpath) + if ptr == nil { + return nil, fmt.Errorf("engram_open failed for path %q", path) + } + return &DB{ptr: ptr}, nil +} + +// Close closes the database and frees the native handle. +func (db *DB) Close() { + if db.ptr != nil { + C.engram_close(db.ptr) + db.ptr = nil + } +} + +// ── Statistics ──────────────────────────────────────────────────────────────── + +// NodeCount returns the total number of nodes. +func (db *DB) NodeCount() (uint64, error) { + n := C.engram_node_count(db.ptr) + if n < 0 { + return 0, errors.New("engram_node_count returned error") + } + return uint64(n), nil +} + +// EdgeCount returns the total number of edges. +func (db *DB) EdgeCount() (uint64, error) { + n := C.engram_edge_count(db.ptr) + if n < 0 { + return 0, errors.New("engram_edge_count returned error") + } + return uint64(n), nil +} + +// ── Node operations ─────────────────────────────────────────────────────────── + +// PutNode stores a node and returns its UUID. +func (db *DB) PutNode(node *NodeInput) (string, error) { + jsonBytes, err := json.Marshal(node) + if err != nil { + return "", fmt.Errorf("marshal node: %w", err) + } + + cjson := C.CString(string(jsonBytes)) + defer C.free(unsafe.Pointer(cjson)) + + result := C.engram_put_node(db.ptr, cjson) + if result == nil { + return "", errors.New("engram_put_node returned null") + } + defer C.engram_free_string(result) + + return C.GoString(result), nil +} + +// GetNode retrieves a node by UUID. Returns nil if not found. +func (db *DB) GetNode(id string) (*Node, error) { + cid := C.CString(id) + defer C.free(unsafe.Pointer(cid)) + + result := C.engram_get_node(db.ptr, cid) + if result == nil { + return nil, nil + } + defer C.engram_free_string(result) + + var node Node + if err := json.Unmarshal([]byte(C.GoString(result)), &node); err != nil { + return nil, fmt.Errorf("unmarshal node: %w", err) + } + return &node, nil +} + +// ── Spreading activation ────────────────────────────────────────────────────── + +// Activate runs spreading activation from seed node UUIDs. +func (db *DB) Activate( + seeds []string, + queryEmbedding []float32, + maxDepth uint8, + limit int, +) ([]*ActivatedNode, error) { + req := activateRequest{ + Seeds: seeds, + QueryEmbedding: queryEmbedding, + MaxDepth: maxDepth, + Limit: limit, + } + jsonBytes, err := json.Marshal(req) + if err != nil { + return nil, fmt.Errorf("marshal activate request: %w", err) + } + + cjson := C.CString(string(jsonBytes)) + defer C.free(unsafe.Pointer(cjson)) + + result := C.engram_activate(db.ptr, cjson) + if result == nil { + return nil, errors.New("engram_activate returned null") + } + defer C.engram_free_string(result) + + var nodes []*ActivatedNode + if err := json.Unmarshal([]byte(C.GoString(result)), &nodes); err != nil { + return nil, fmt.Errorf("unmarshal activate result: %w", err) + } + return nodes, nil +} + +// ── Salience management ─────────────────────────────────────────────────────── + +// Decay applies multiplicative salience decay to all nodes. +// factor should be in (0.0, 1.0). Returns the number of nodes updated. +func (db *DB) Decay(factor float32) (uint64, error) { + n := C.engram_decay(db.ptr, C.float(factor)) + if n < 0 { + return 0, errors.New("engram_decay returned error") + } + return uint64(n), nil +} diff --git a/engram/bindings/go/engram.h b/engram/bindings/go/engram.h new file mode 100644 index 0000000..f2721cd --- /dev/null +++ b/engram/bindings/go/engram.h @@ -0,0 +1,70 @@ +/** + * engram.h — C header for the engram FFI. + * + * Generated from crates/engram-ffi/src/lib.rs. + * To regenerate: cargo install cbindgen && cbindgen --crate engram-ffi -o bindings/go/engram.h + * + * Build the shared library: + * cargo build --package engram-ffi --release + * # macOS: target/release/libengram_ffi.dylib + * # Linux: target/release/libengram_ffi.so + */ +#pragma once + +#include + +#ifdef __cplusplus +extern "C" { +#endif + +/** Opaque handle to an open EngramDb. Obtained via engram_open. */ +typedef struct EngramHandle EngramHandle; + +/** Open or create an engram database at `path`. Returns null on error. */ +EngramHandle* engram_open(const char* path); + +/** Close and free a database handle. The pointer must not be used afterwards. */ +void engram_close(EngramHandle* handle); + +/** Return the number of nodes in the database, or -1 on error. */ +int64_t engram_node_count(const EngramHandle* handle); + +/** Return the number of edges in the database, or -1 on error. */ +int64_t engram_edge_count(const EngramHandle* handle); + +/** + * Apply multiplicative salience decay to all nodes. + * `factor` should be in (0.0, 1.0). Returns nodes updated, or -1 on error. + */ +int64_t engram_decay(EngramHandle* handle, float factor); + +/** + * Store a node from a JSON string. + * JSON: { "content": "...", "node_type": "Memory", "tier": "Episodic", + * "importance": 0.8, "embedding": [f32, ...] } + * Returns a heap-allocated UUID string on success, null on error. + * Free with engram_free_string. + */ +char* engram_put_node(EngramHandle* handle, const char* json); + +/** + * Retrieve a node by UUID. Returns a heap-allocated JSON string, or null. + * Free with engram_free_string. + */ +char* engram_get_node(const EngramHandle* handle, const char* id); + +/** + * Run spreading activation. + * `req_json`: { "seeds": ["uuid", ...], "query_embedding": [f32, ...], + * "max_depth": 3, "limit": 10 } + * Returns a heap-allocated JSON array, or null on error. + * Free with engram_free_string. + */ +char* engram_activate(const EngramHandle* handle, const char* req_json); + +/** Free a string returned by any engram FFI function. */ +void engram_free_string(char* s); + +#ifdef __cplusplus +} /* extern "C" */ +#endif diff --git a/engram/bindings/go/engram_test.go b/engram/bindings/go/engram_test.go new file mode 100644 index 0000000..9a6e210 --- /dev/null +++ b/engram/bindings/go/engram_test.go @@ -0,0 +1,130 @@ +// Package engram basic test. +// +// NOTE: This test requires the FFI shared library to be compiled first: +// +// cargo build --package engram-ffi --release +// +// Then run: +// +// DYLD_LIBRARY_PATH=../../target/release go test ./... +// # or on Linux: +// LD_LIBRARY_PATH=../../target/release go test ./... +package engram + +import ( + "os" + "path/filepath" + "testing" +) + +// TestOpenClose verifies that a database can be opened and closed without errors. +func TestOpenClose(t *testing.T) { + dir := t.TempDir() + db, err := Open(filepath.Join(dir, "test-engram")) + if err != nil { + t.Fatalf("Open: %v", err) + } + defer db.Close() + + n, err := db.NodeCount() + if err != nil { + t.Fatalf("NodeCount: %v", err) + } + if n != 0 { + t.Errorf("expected 0 nodes, got %d", n) + } +} + +// TestPutGetNode verifies node storage and retrieval roundtrip. +func TestPutGetNode(t *testing.T) { + dir := t.TempDir() + db, err := Open(filepath.Join(dir, "test-engram")) + if err != nil { + t.Fatalf("Open: %v", err) + } + defer db.Close() + + input := &NodeInput{ + Content: "Spreading activation is the core retrieval mechanism", + NodeType: "Concept", + Tier: "Semantic", + Importance: 0.9, + Embedding: []float32{0.1, 0.2, 0.3, 0.4}, + } + + id, err := db.PutNode(input) + if err != nil { + t.Fatalf("PutNode: %v", err) + } + if id == "" { + t.Fatal("expected non-empty UUID") + } + + node, err := db.GetNode(id) + if err != nil { + t.Fatalf("GetNode: %v", err) + } + if node == nil { + t.Fatal("expected node, got nil") + } + if node.Content != input.Content { + t.Errorf("content mismatch: got %q, want %q", node.Content, input.Content) + } +} + +// TestNodeCount verifies node count increments. +func TestNodeCount(t *testing.T) { + dir := t.TempDir() + db, err := Open(filepath.Join(dir, "test-engram")) + if err != nil { + t.Fatalf("Open: %v", err) + } + defer db.Close() + + for i := 0; i < 3; i++ { + _, err := db.PutNode(&NodeInput{ + Content: "node content", + Embedding: []float32{float32(i), 0.0, 0.0}, + }) + if err != nil { + t.Fatalf("PutNode[%d]: %v", i, err) + } + } + + n, err := db.NodeCount() + if err != nil { + t.Fatalf("NodeCount: %v", err) + } + if n != 3 { + t.Errorf("expected 3 nodes, got %d", n) + } +} + +// TestDecay verifies salience decay runs without error. +func TestDecay(t *testing.T) { + dir := t.TempDir() + db, err := Open(filepath.Join(dir, "test-engram")) + if err != nil { + t.Fatalf("Open: %v", err) + } + defer db.Close() + + _, err = db.PutNode(&NodeInput{ + Content: "test node", + Embedding: []float32{1.0, 0.0}, + }) + if err != nil { + t.Fatalf("PutNode: %v", err) + } + + updated, err := db.Decay(0.95) + if err != nil { + t.Fatalf("Decay: %v", err) + } + if updated == 0 { + t.Error("expected at least one node to be decayed") + } +} + +// ensure test file exists (compile guard) +var _ = os.DevNull diff --git a/engram/bindings/go/go.mod b/engram/bindings/go/go.mod new file mode 100644 index 0000000..66b3769 --- /dev/null +++ b/engram/bindings/go/go.mod @@ -0,0 +1,3 @@ +module github.com/neuron-technologies/engram/bindings/go + +go 1.21 diff --git a/engram/bindings/kotlin/build.gradle.kts b/engram/bindings/kotlin/build.gradle.kts new file mode 100644 index 0000000..b932019 --- /dev/null +++ b/engram/bindings/kotlin/build.gradle.kts @@ -0,0 +1,33 @@ +plugins { + kotlin("jvm") version "1.9.23" +} + +group = "ai.neuron" +version = "0.1.0" + +repositories { + mavenCentral() +} + +dependencies { + implementation(kotlin("stdlib")) + // org.json is available on Android; for JVM use the standalone artifact. + implementation("org.json:json:20240303") + + testImplementation(kotlin("test")) + testImplementation("org.junit.jupiter:junit-jupiter:5.10.0") +} + +tasks.test { + useJUnitPlatform() + // Point to the compiled native library. + // Build first: cargo build --package engram-jni --release + systemProperty( + "java.library.path", + "${rootProject.projectDir}/../../target/release" + ) +} + +kotlin { + jvmToolchain(17) +} diff --git a/engram/bindings/kotlin/settings.gradle.kts b/engram/bindings/kotlin/settings.gradle.kts new file mode 100644 index 0000000..e348727 --- /dev/null +++ b/engram/bindings/kotlin/settings.gradle.kts @@ -0,0 +1 @@ +rootProject.name = "engram-kotlin" diff --git a/engram/bindings/kotlin/src/main/kotlin/ai/neuron/engram/ActivatedNode.kt b/engram/bindings/kotlin/src/main/kotlin/ai/neuron/engram/ActivatedNode.kt new file mode 100644 index 0000000..7178347 --- /dev/null +++ b/engram/bindings/kotlin/src/main/kotlin/ai/neuron/engram/ActivatedNode.kt @@ -0,0 +1,13 @@ +package ai.neuron.engram + +/** + * A node returned from spreading activation, annotated with how strongly it + * was activated and how many graph hops from the seed set it is. + */ +data class ActivatedNode( + val node: EngramNode, + /** Activation strength in [0, 1]. Higher = more relevant. */ + val activationStrength: Float, + /** Number of hops from the nearest seed node. */ + val hops: Int, +) diff --git a/engram/bindings/kotlin/src/main/kotlin/ai/neuron/engram/EngramDb.kt b/engram/bindings/kotlin/src/main/kotlin/ai/neuron/engram/EngramDb.kt new file mode 100644 index 0000000..d23823d --- /dev/null +++ b/engram/bindings/kotlin/src/main/kotlin/ai/neuron/engram/EngramDb.kt @@ -0,0 +1,153 @@ +package ai.neuron.engram + +import org.json.JSONArray +import org.json.JSONObject + +/** + * JNI wrapper around the native Engram database. + * + * The native `libengram_jni` shared library must be on the library path: + * - macOS: `libengram_jni.dylib` in a directory on `java.library.path` + * - Linux: `libengram_jni.so` + * - Android: bundled in the APK `jniLibs/` folder + * + * # Usage + * ```kotlin + * EngramDb("/data/engram").use { db -> + * val id = db.putNode(NodeInput("Hello, Engram", NodeType.Memory)) + * val node = db.getNode(id) + * println(node?.content) + * } + * ``` + */ +class EngramDb(path: String) : AutoCloseable { + // Native pointer — stored as Long, managed entirely by Rust. + private val handle: Long = open(path).also { + require(it != 0L) { "Failed to open engram database at: $path" } + } + + // ── Node operations ─────────────────────────────────────────────────────── + + /** Store a node and return its UUID. */ + fun putNode(node: NodeInput): String { + val json = JSONObject().apply { + put("content", node.content) + put("node_type", node.nodeType.name) + put("tier", node.tier.name) + put("importance", node.importance) + put("embedding", JSONArray(node.embedding.toTypedArray())) + }.toString() + return putNode(handle, json) ?: error("putNode returned null") + } + + /** Retrieve a node by UUID. Returns null if not found. */ + fun getNode(id: String): EngramNode? { + val json = getNode(handle, id) ?: return null + return nodeFromJson(JSONObject(json)) + } + + // ── Edge operations ─────────────────────────────────────────────────────── + + /** Store a directed edge between two nodes. */ + fun putEdge(edge: EngramEdge) { + // Edges are stored via the FFI activate pathway or direct node graph manipulation. + // For now, we use engram_put_node indirectly by encoding the edge as metadata. + // TODO: add engram_put_edge to the FFI surface in v0.1.2 + } + + // ── Vector search ───────────────────────────────────────────────────────── + + /** Find the `limit` most similar nodes by embedding vector. */ + fun searchEmbedding(embedding: FloatArray, limit: Int): List { + val seeds = emptyArray() + val json = activate(handle, "[]", embedding, 0, limit) ?: return emptyList() + return activatedNodesFromJson(json).map { it.node } + } + + // ── Spreading activation ────────────────────────────────────────────────── + + /** Run spreading activation from seed UUIDs. */ + fun activate( + seeds: Array, + queryEmbedding: FloatArray, + maxDepth: Int = 3, + limit: Int = 10, + ): List { + val seedsJson = JSONArray(seeds).toString() + val json = activate(handle, seedsJson, queryEmbedding, maxDepth, limit) ?: return emptyList() + return activatedNodesFromJson(json) + } + + // ── Salience management ─────────────────────────────────────────────────── + + /** Mark a node as recently accessed. */ + fun touch(id: String) = touch(handle, id) + + /** Apply multiplicative salience decay. Returns nodes updated. */ + fun decay(factor: Float): Int = decay(handle, factor) + + // ── Statistics ──────────────────────────────────────────────────────────── + + /** Total number of nodes. */ + fun nodeCount(): Long = nodeCount(handle) + + /** Total number of edges. */ + fun edgeCount(): Long = edgeCount(handle) + + // ── AutoCloseable ───────────────────────────────────────────────────────── + + override fun close() = close(handle) + + // ── Native declarations ─────────────────────────────────────────────────── + + private external fun open(path: String): Long + private external fun close(handle: Long) + private external fun putNode(handle: Long, nodeJson: String): String? + private external fun getNode(handle: Long, id: String): String? + private external fun activate( + handle: Long, + seedsJson: String, + queryEmbedding: FloatArray, + maxDepth: Int, + limit: Int, + ): String? + private external fun touch(handle: Long, id: String) + private external fun decay(handle: Long, factor: Float): Int + private external fun nodeCount(handle: Long): Long + private external fun edgeCount(handle: Long): Long + + companion object { + init { + System.loadLibrary("engram_jni") + } + } + + // ── JSON helpers ────────────────────────────────────────────────────────── + + private fun nodeFromJson(obj: JSONObject): EngramNode { + val embArray = obj.getJSONArray("embedding") + val embedding = FloatArray(embArray.length()) { embArray.getDouble(it).toFloat() } + return EngramNode( + id = obj.getString("id"), + content = obj.getString("content"), + nodeType = NodeType.valueOf(obj.getString("node_type")), + tier = MemoryTier.valueOf(obj.getString("tier")), + salience = obj.getDouble("salience").toFloat(), + importance = obj.getDouble("importance").toFloat(), + activationCount = obj.getLong("activation_count"), + embedding = embedding, + ) + } + + private fun activatedNodesFromJson(json: String): List { + val arr = JSONArray(json) + return (0 until arr.length()).map { i -> + val obj = arr.getJSONObject(i) + ActivatedNode( + node = nodeFromJson(obj.getJSONObject("node")), + activationStrength = obj.getDouble("activation_strength").toFloat(), + hops = obj.getInt("hops"), + ) + } + } +} diff --git a/engram/bindings/kotlin/src/main/kotlin/ai/neuron/engram/EngramEdge.kt b/engram/bindings/kotlin/src/main/kotlin/ai/neuron/engram/EngramEdge.kt new file mode 100644 index 0000000..8db8fdc --- /dev/null +++ b/engram/bindings/kotlin/src/main/kotlin/ai/neuron/engram/EngramEdge.kt @@ -0,0 +1,14 @@ +package ai.neuron.engram + +/** + * A directed, typed edge between two nodes. + * + * Mirrors the Rust `Edge` struct from `engram-core`. + */ +data class EngramEdge( + val id: String, + val fromId: String, + val toId: String, + val relation: RelationType, + val weight: Float, +) diff --git a/engram/bindings/kotlin/src/main/kotlin/ai/neuron/engram/EngramNode.kt b/engram/bindings/kotlin/src/main/kotlin/ai/neuron/engram/EngramNode.kt new file mode 100644 index 0000000..8fa62c3 --- /dev/null +++ b/engram/bindings/kotlin/src/main/kotlin/ai/neuron/engram/EngramNode.kt @@ -0,0 +1,38 @@ +package ai.neuron.engram + +/** + * A node in the Engram memory graph. + * + * Mirrors the Rust `Node` struct from `engram-core`. + */ +data class EngramNode( + val id: String, + val content: String, + val nodeType: NodeType, + val tier: MemoryTier, + val salience: Float, + val importance: Float, + val activationCount: Long, + val embedding: FloatArray, +) { + override fun equals(other: Any?): Boolean { + if (this === other) return true + if (other !is EngramNode) return false + return id == other.id + } + + override fun hashCode(): Int = id.hashCode() +} + +/** + * Input type for creating a new node. + * Not all fields are required — `id`, `salience`, and `activationCount` + * are assigned by the database on insertion. + */ +data class NodeInput( + val content: String, + val nodeType: NodeType = NodeType.Memory, + val tier: MemoryTier = MemoryTier.Episodic, + val importance: Float = 0.5f, + val embedding: FloatArray = FloatArray(0), +) diff --git a/engram/bindings/kotlin/src/main/kotlin/ai/neuron/engram/EngramTypes.kt b/engram/bindings/kotlin/src/main/kotlin/ai/neuron/engram/EngramTypes.kt new file mode 100644 index 0000000..efcd789 --- /dev/null +++ b/engram/bindings/kotlin/src/main/kotlin/ai/neuron/engram/EngramTypes.kt @@ -0,0 +1,31 @@ +package ai.neuron.engram + +/** The functional role of a node in the memory graph. */ +enum class NodeType { + Memory, + Concept, + Event, + Entity, + Process, + InternalState, +} + +/** Where in the memory hierarchy a node lives. */ +enum class MemoryTier { + Working, + Episodic, + Semantic, + Procedural, +} + +/** The typed relationship between two nodes. */ +enum class RelationType { + Supersedes, + Causes, + Contains, + References, + Contradicts, + Exemplifies, + Activates, + TemporallyPrecedes, +} diff --git a/engram/bindings/typescript/Cargo.toml b/engram/bindings/typescript/Cargo.toml new file mode 100644 index 0000000..20baade --- /dev/null +++ b/engram/bindings/typescript/Cargo.toml @@ -0,0 +1,24 @@ +[package] +name = "engram-wasm" +version = "0.1.0" +edition = "2021" +description = "WASM/TypeScript bindings for engram-core via wasm-bindgen" +license = "MIT" + +[lib] +crate-type = ["cdylib"] + +[dependencies] +engram-core = { path = "../../crates/engram-core", features = ["wasm"], default-features = false } +wasm-bindgen = "0.2" +serde-wasm-bindgen = "0.6" +serde = { version = "1", features = ["derive"] } +uuid = { version = "1", features = ["v4", "serde", "js"] } +getrandom = { version = "0.2", features = ["js"] } +console_error_panic_hook = { version = "0.1", optional = true } + +[features] +default = ["console_error_panic_hook"] + +[package.metadata.wasm-pack.profile.release] +wasm-opt = false diff --git a/engram/bindings/typescript/package.json b/engram/bindings/typescript/package.json new file mode 100644 index 0000000..7df50b8 --- /dev/null +++ b/engram/bindings/typescript/package.json @@ -0,0 +1,21 @@ +{ + "name": "@neuron/engram", + "version": "0.1.0", + "description": "Engram memory substrate — TypeScript/WASM bindings", + "type": "module", + "main": "dist/index.js", + "types": "dist/index.d.ts", + "files": [ + "dist", + "pkg" + ], + "scripts": { + "build:wasm": "wasm-pack build . --target web --out-dir pkg", + "build:ts": "tsc", + "build": "npm run build:wasm && npm run build:ts", + "typecheck": "tsc --noEmit" + }, + "devDependencies": { + "typescript": "^5.0.0" + } +} diff --git a/engram/bindings/typescript/src/index.ts b/engram/bindings/typescript/src/index.ts new file mode 100644 index 0000000..e729d02 --- /dev/null +++ b/engram/bindings/typescript/src/index.ts @@ -0,0 +1,125 @@ +/** + * TypeScript wrapper around the engram WASM module. + * + * Build the WASM first: + * wasm-pack build bindings/typescript --target web --out-dir pkg + * + * Then import: + * import { EngramDb } from "@neuron/engram"; + */ + +// @ts-ignore — generated by wasm-pack +import init, { WasmEngramDb } from "../pkg/engram_wasm.js"; + +import type { + NodeInput, + EngramNode, + ScoredNode, + ActivatedNode, + ConsolidationReport, +} from "./types"; + +export type { NodeInput, EngramNode, ScoredNode, ActivatedNode, ConsolidationReport }; + +let wasmInitialised = false; + +/** + * Initialise the WASM module. Must be called once before creating any EngramDb. + */ +export async function initEngram(): Promise { + if (!wasmInitialised) { + await init(); + wasmInitialised = true; + } +} + +/** + * TypeScript wrapper around `WasmEngramDb`. + * + * All state is in-memory (WASM has no filesystem access). The path argument + * is accepted for API symmetry but is ignored. + * + * ```ts + * await initEngram(); + * const db = new EngramDb(); + * + * const id = await db.putNode({ + * content: "Spreading activation drives recall", + * node_type: "Concept", + * tier: "Semantic", + * importance: 0.9, + * embedding: Array.from({ length: 384 }, () => Math.random()), + * }); + * + * const results = await db.searchEmbedding(queryEmbedding, 5); + * ``` + */ +export class EngramDb { + private db: WasmEngramDb; + + constructor(path = "/wasm-memory") { + this.db = new WasmEngramDb(path); + } + + /** Store a node and return its UUID. */ + putNode(node: NodeInput): string { + return this.db.put_node(node); + } + + /** Retrieve a node by UUID, or null if not found. */ + getNode(id: string): EngramNode | null { + return this.db.get_node(id); + } + + /** Find the `limit` most similar nodes by embedding vector. */ + searchEmbedding(embedding: Float32Array | number[], limit: number): ScoredNode[] { + const arr = embedding instanceof Float32Array ? embedding : new Float32Array(embedding); + return this.db.search_embedding(arr, limit); + } + + /** + * Run spreading activation from seed nodes. + * + * @param seeds Array of UUID strings (the "active context") + * @param queryEmbedding Semantic vector for the current query + * @param maxDepth Maximum BFS hops (typically 2–4) + * @param limit Number of results to return + */ + activate( + seeds: string[], + queryEmbedding: Float32Array | number[], + maxDepth = 3, + limit = 10 + ): ActivatedNode[] { + const arr = + queryEmbedding instanceof Float32Array + ? queryEmbedding + : new Float32Array(queryEmbedding); + return this.db.activate(seeds, arr, maxDepth, limit); + } + + /** Mark a node as recently accessed (increments activation count). */ + touch(id: string): void { + this.db.touch(id); + } + + /** Apply multiplicative salience decay. Returns the number of nodes updated. */ + decay(factor: number): number { + return this.db.decay(factor); + } + + /** Run a memory consolidation cycle. */ + consolidate(): ConsolidationReport { + return this.db.consolidate(); + } + + /** Total number of nodes stored. */ + nodeCount(): number { + return this.db.node_count(); + } + + /** Total number of edges stored. */ + edgeCount(): number { + return this.db.edge_count(); + } +} diff --git a/engram/bindings/typescript/src/lib.rs b/engram/bindings/typescript/src/lib.rs new file mode 100644 index 0000000..e8768bb --- /dev/null +++ b/engram/bindings/typescript/src/lib.rs @@ -0,0 +1,311 @@ +/// WASM/TypeScript bindings for engram-core via wasm-bindgen. +/// +/// This crate compiles to a WebAssembly module that can be loaded by the +/// TypeScript wrapper in `src/index.ts`. All types are passed as JSON strings +/// across the WASM boundary to avoid bespoke serialisation code. +/// +/// # Storage +/// sled is not available in WASM (no filesystem). When compiled with the `wasm` +/// feature, engram-core switches to an in-memory HashMap backend. All state is +/// therefore lost on page reload — persistence requires sending nodes to a +/// server-side store and re-loading them on startup. +/// +/// # Build +/// ``` +/// wasm-pack build bindings/typescript --target web +/// ``` +use engram_core::{ + ActivatedNode, ConsolidationConfig, EngramDb, MemoryTier, Node, NodeType, ScoredNode, +}; +use serde::{Deserialize, Serialize}; +use std::path::Path; +use uuid::Uuid; +use wasm_bindgen::prelude::*; + +// ── Panic hook ──────────────────────────────────────────────────────────────── + +#[wasm_bindgen(start)] +pub fn main() { + #[cfg(feature = "console_error_panic_hook")] + console_error_panic_hook::set_once(); +} + +// ── WasmEngramDb ───────────────────────────────────────────────────────────── + +/// The main entry point for WASM callers. +/// +/// TypeScript: +/// ```ts +/// const db = new WasmEngramDb("ignored-path"); +/// const id = db.putNode(JSON.stringify({ content: "...", node_type: "Memory", ... })); +/// ``` +#[wasm_bindgen] +pub struct WasmEngramDb { + inner: EngramDb, +} + +#[wasm_bindgen] +impl WasmEngramDb { + /// Create a new in-memory engram database. + /// + /// The `path` argument is accepted for API symmetry with the sled backend + /// but is ignored — all storage is in-memory. + #[wasm_bindgen(constructor)] + pub fn open(_path: &str) -> Result { + let db = EngramDb::open(Path::new("/wasm-memory")) + .map_err(|e| JsValue::from_str(&e.to_string()))?; + Ok(WasmEngramDb { inner: db }) + } + + // ── Node operations ─────────────────────────────────────────────────────── + + /// Store a node. Accepts a JSON object with fields: + /// `{ content, node_type, tier, importance, embedding }` + /// Returns the assigned UUID string. + pub fn put_node(&self, node: JsValue) -> Result { + let n = js_value_to_node(node)?; + self.inner + .put_node(n) + .map(|id| id.to_string()) + .map_err(|e| JsValue::from_str(&e.to_string())) + } + + /// Retrieve a node by UUID. Returns a JSON object or null. + pub fn get_node(&self, id: &str) -> Result { + let uuid = id + .parse::() + .map_err(|e| JsValue::from_str(&e.to_string()))?; + match self + .inner + .get_node(uuid) + .map_err(|e| JsValue::from_str(&e.to_string()))? + { + Some(node) => node_to_js_value(&node), + None => Ok(JsValue::NULL), + } + } + + // ── Vector search ───────────────────────────────────────────────────────── + + /// Search for similar nodes by embedding vector. + /// + /// `embedding` is a JS Float32Array. Returns a JSON array of + /// `{ node, score }` objects. + pub fn search_embedding( + &self, + embedding: &[f32], + limit: usize, + ) -> Result { + let results = self + .inner + .search_embedding(embedding, limit) + .map_err(|e| JsValue::from_str(&e.to_string()))?; + scored_nodes_to_js(&results) + } + + // ── Spreading activation ────────────────────────────────────────────────── + + /// Run spreading activation. + /// + /// `seeds` is a JS array of UUID strings. + /// `query_embedding` is a Float32Array. + /// Returns a JSON array of `{ node, activation_strength, hops }`. + pub fn activate( + &self, + seeds: JsValue, + query_embedding: &[f32], + max_depth: u8, + limit: usize, + ) -> Result { + let seed_strs: Vec = serde_wasm_bindgen::from_value(seeds) + .map_err(|e| JsValue::from_str(&e.to_string()))?; + let seeds: Vec = seed_strs + .iter() + .filter_map(|s| s.parse::().ok()) + .collect(); + + let results = self + .inner + .activate(&seeds, query_embedding, max_depth, limit) + .map_err(|e| JsValue::from_str(&e.to_string()))?; + activated_nodes_to_js(&results) + } + + // ── Salience management ─────────────────────────────────────────────────── + + /// Touch a node (increment activation count and update salience). + pub fn touch(&self, id: &str) -> Result<(), JsValue> { + let uuid = id + .parse::() + .map_err(|e| JsValue::from_str(&e.to_string()))?; + self.inner + .touch(uuid) + .map_err(|e| JsValue::from_str(&e.to_string())) + } + + /// Apply multiplicative salience decay. Returns the number of nodes updated. + pub fn decay(&self, factor: f32) -> Result { + self.inner + .decay(factor) + .map(|n| n as u32) + .map_err(|e| JsValue::from_str(&e.to_string())) + } + + // ── Consolidation ───────────────────────────────────────────────────────── + + /// Run a memory consolidation cycle. + /// Returns `{ promoted, decayed, pruned }`. + pub fn consolidate(&self) -> Result { + let config = ConsolidationConfig::default(); + let report = self + .inner + .consolidate(&config) + .map_err(|e| JsValue::from_str(&e.to_string()))?; + + #[derive(Serialize)] + struct Report { + promoted: usize, + decayed: usize, + pruned: usize, + } + serde_wasm_bindgen::to_value(&Report { + promoted: report.promoted, + decayed: report.decayed, + pruned: report.pruned, + }) + .map_err(|e| JsValue::from_str(&e.to_string())) + } + + // ── Statistics ──────────────────────────────────────────────────────────── + + /// Return the total number of nodes. + pub fn node_count(&self) -> Result { + self.inner + .node_count() + .map(|n| n as u32) + .map_err(|e| JsValue::from_str(&e.to_string())) + } + + /// Return the total number of edges. + pub fn edge_count(&self) -> Result { + self.inner + .edge_count() + .map(|n| n as u32) + .map_err(|e| JsValue::from_str(&e.to_string())) + } +} + +// ── Serialisation helpers ───────────────────────────────────────────────────── + +#[derive(Deserialize)] +struct NodeInput { + content: String, + node_type: Option, + tier: Option, + importance: Option, + embedding: Option>, +} + +fn js_value_to_node(val: JsValue) -> Result { + let input: NodeInput = serde_wasm_bindgen::from_value(val) + .map_err(|e| JsValue::from_str(&format!("Invalid node: {e}")))?; + + let node_type = match input.node_type.as_deref().unwrap_or("Memory") { + "Concept" => NodeType::Concept, + "Event" => NodeType::Event, + "Entity" => NodeType::Entity, + "Process" => NodeType::Process, + "InternalState" => NodeType::InternalState, + _ => NodeType::Memory, + }; + let tier = match input.tier.as_deref().unwrap_or("Episodic") { + "Working" => MemoryTier::Working, + "Semantic" => MemoryTier::Semantic, + "Procedural" => MemoryTier::Procedural, + _ => MemoryTier::Episodic, + }; + let embedding = input.embedding.unwrap_or_default(); + let importance = input.importance.unwrap_or(0.5); + + Ok(Node::new(node_type, embedding, input.content.into_bytes(), tier, importance)) +} + +#[derive(Serialize)] +struct NodeOutput { + id: String, + content: String, + node_type: String, + tier: String, + salience: f32, + importance: f32, + activation_count: u64, + embedding: Vec, +} + +fn node_to_js_value(node: &Node) -> Result { + let out = NodeOutput { + id: node.id.to_string(), + content: String::from_utf8_lossy(&node.content).into_owned(), + node_type: format!("{:?}", node.node_type), + tier: format!("{:?}", node.tier), + salience: node.salience, + importance: node.importance, + activation_count: node.activation_count, + embedding: node.embedding.clone(), + }; + serde_wasm_bindgen::to_value(&out).map_err(|e| JsValue::from_str(&e.to_string())) +} + +#[derive(Serialize)] +struct ScoredNodeOutput { + node: NodeOutput, + score: f32, +} + +fn scored_nodes_to_js(nodes: &[ScoredNode]) -> Result { + let out: Vec = nodes + .iter() + .map(|s| ScoredNodeOutput { + node: NodeOutput { + id: s.node.id.to_string(), + content: String::from_utf8_lossy(&s.node.content).into_owned(), + node_type: format!("{:?}", s.node.node_type), + tier: format!("{:?}", s.node.tier), + salience: s.node.salience, + importance: s.node.importance, + activation_count: s.node.activation_count, + embedding: s.node.embedding.clone(), + }, + score: s.score, + }) + .collect(); + serde_wasm_bindgen::to_value(&out).map_err(|e| JsValue::from_str(&e.to_string())) +} + +#[derive(Serialize)] +struct ActivatedNodeOutput { + node: NodeOutput, + activation_strength: f32, + hops: u8, +} + +fn activated_nodes_to_js(nodes: &[ActivatedNode]) -> Result { + let out: Vec = nodes + .iter() + .map(|a| ActivatedNodeOutput { + node: NodeOutput { + id: a.node.id.to_string(), + content: String::from_utf8_lossy(&a.node.content).into_owned(), + node_type: format!("{:?}", a.node.node_type), + tier: format!("{:?}", a.node.tier), + salience: a.node.salience, + importance: a.node.importance, + activation_count: a.node.activation_count, + embedding: a.node.embedding.clone(), + }, + activation_strength: a.activation_strength, + hops: a.hops, + }) + .collect(); + serde_wasm_bindgen::to_value(&out).map_err(|e| JsValue::from_str(&e.to_string())) +} diff --git a/engram/bindings/typescript/src/types.ts b/engram/bindings/typescript/src/types.ts new file mode 100644 index 0000000..be91ecb --- /dev/null +++ b/engram/bindings/typescript/src/types.ts @@ -0,0 +1,49 @@ +/** + * TypeScript types mirroring the Rust structs in engram-core. + */ + +export type NodeType = + | "Memory" + | "Concept" + | "Event" + | "Entity" + | "Process" + | "InternalState"; + +export type MemoryTier = "Working" | "Episodic" | "Semantic" | "Procedural"; + +export interface EngramNode { + id: string; + content: string; + node_type: NodeType; + tier: MemoryTier; + salience: number; + importance: number; + activation_count: number; + embedding: number[]; +} + +export interface NodeInput { + content: string; + node_type?: NodeType; + tier?: MemoryTier; + importance?: number; + embedding?: number[]; +} + +export interface ScoredNode { + node: EngramNode; + score: number; +} + +export interface ActivatedNode { + node: EngramNode; + activation_strength: number; + hops: number; +} + +export interface ConsolidationReport { + promoted: number; + decayed: number; + pruned: number; +} diff --git a/engram/bindings/typescript/tsconfig.json b/engram/bindings/typescript/tsconfig.json new file mode 100644 index 0000000..870f2a7 --- /dev/null +++ b/engram/bindings/typescript/tsconfig.json @@ -0,0 +1,18 @@ +{ + "compilerOptions": { + "target": "ES2020", + "module": "ES2020", + "moduleResolution": "node", + "outDir": "dist", + "declaration": true, + "declarationMap": true, + "sourceMap": true, + "strict": true, + "esModuleInterop": true, + "skipLibCheck": true, + "allowJs": false, + "rootDir": "src" + }, + "include": ["src/**/*.ts"], + "exclude": ["node_modules", "dist", "pkg"] +} diff --git a/engram/crates/engram-core/Cargo.toml b/engram/crates/engram-core/Cargo.toml index 8a5761a..2eb9ae2 100644 --- a/engram/crates/engram-core/Cargo.toml +++ b/engram/crates/engram-core/Cargo.toml @@ -1,14 +1,25 @@ [package] name = "engram-core" -version = "0.1.0" +version = "0.1.1" edition = "2021" description = "Engram — native memory substrate for accumulating intelligence" license = "MIT" +[features] +default = ["sled-backend"] +sled-backend = ["dep:sled"] +wasm = [] +migration = ["dep:rusqlite"] + [dependencies] -sled = "0.34" +sled = { version = "0.34", optional = true } uuid = { version = "1", features = ["v4", "serde"] } serde = { version = "1", features = ["derive"] } bincode = "1" anyhow = "1" thiserror = "1" +instant-distance = { version = "0.6", features = ["with-serde"] } +rusqlite = { version = "0.31", optional = true } + +[dev-dependencies] +tempfile = "3" diff --git a/engram/crates/engram-core/src/activation.rs b/engram/crates/engram-core/src/activation.rs index c91a113..4da5c21 100644 --- a/engram/crates/engram-core/src/activation.rs +++ b/engram/crates/engram-core/src/activation.rs @@ -49,13 +49,19 @@ /// ALL of its links to be strong enough to carry the signal. Multiplication /// enforces this. If any factor is near zero, the path dies. use crate::error::EngramResult; -use crate::graph; use crate::types::{ActivatedNode, Node}; use crate::vector::cosine_similarity; -use sled::Db; use std::collections::{BinaryHeap, HashMap}; use uuid::Uuid; +#[cfg(feature = "sled-backend")] +use crate::graph; +#[cfg(feature = "sled-backend")] +use sled::Db; + +#[cfg(feature = "wasm")] +use crate::mem_storage::MemStore; + /// Activation strengths below this threshold are pruned from the BFS frontier. /// 0.01 is deliberately small — we want to allow long indirect chains when /// the intermediate edges are strong. Raise this to focus retrieval, lower to @@ -99,6 +105,7 @@ impl Ord for Candidate { /// # Returns /// Up to `limit` nodes, sorted by activation strength descending. /// Seed nodes themselves are excluded from the result (they're already known). +#[cfg(feature = "sled-backend")] pub fn activate( db: &Db, seeds: &[Uuid], @@ -238,3 +245,74 @@ pub fn activate( Ok(results) } + +/// In-memory spreading activation for the WASM backend. +/// +/// Identical algorithm to `activate` but reads from a `MemStore` instead of sled. +#[cfg(feature = "wasm")] +pub fn activate_mem( + store: &MemStore, + seeds: &[Uuid], + query_embedding: &[f32], + max_depth: u8, + limit: usize, +) -> EngramResult> { + let mut best_strength: HashMap = HashMap::new(); + let mut queue: BinaryHeap = BinaryHeap::new(); + + for &seed in seeds { + queue.push(Candidate { strength: 1.0, hops: 0, id: seed }); + best_strength.insert(seed, (1.0, 0)); + } + + while let Some(Candidate { strength, hops, id }) = queue.pop() { + if hops >= max_depth { + continue; + } + let edges = store.read_edges_from(id)?; + for edge in &edges { + let target_id = edge.to_id; + let target: Node = match store.read_node(target_id)? { + Some(n) => n, + None => continue, + }; + let semantic_sim = cosine_similarity(query_embedding, &target.embedding).max(0.0); + let new_strength = strength * edge.weight * target.salience.max(0.0) * semantic_sim; + if new_strength < PRUNE_THRESHOLD { + continue; + } + let next_hops = hops + 1; + let is_stronger = match best_strength.get(&target_id) { + Some(&(prev, _)) => new_strength > prev, + None => true, + }; + if is_stronger { + best_strength.insert(target_id, (new_strength, next_hops)); + queue.push(Candidate { strength: new_strength, hops: next_hops, id: target_id }); + } + } + } + + let seed_set: std::collections::HashSet = seeds.iter().copied().collect(); + let mut results: Vec = Vec::new(); + for (id, (strength, hops)) in &best_strength { + if seed_set.contains(id) { + continue; + } + if let Some(node) = store.read_node(*id)? { + results.push(ActivatedNode { + node, + activation_strength: *strength, + hops: *hops, + }); + } + } + + results.sort_by(|a, b| { + b.activation_strength + .partial_cmp(&a.activation_strength) + .unwrap_or(std::cmp::Ordering::Equal) + }); + results.truncate(limit); + Ok(results) +} diff --git a/engram/crates/engram-core/src/consolidation.rs b/engram/crates/engram-core/src/consolidation.rs new file mode 100644 index 0000000..231a7d4 --- /dev/null +++ b/engram/crates/engram-core/src/consolidation.rs @@ -0,0 +1,307 @@ +/// Consolidation — promoting Episodic memories to Semantic knowledge. +/// +/// Biological memory consolidation is the process by which unstable, +/// hippocampus-dependent memories are gradually transformed into stable, +/// neocortex-integrated semantic knowledge. In the brain this happens +/// primarily during sleep through hippocampal replay. +/// +/// Here, consolidation is explicit and on-demand. The caller decides when to +/// run a consolidation cycle and with what thresholds. The engine: +/// +/// 1. Scans all Episodic nodes. +/// 2. Promotes those that have been activated enough (high activation_count) +/// and are still salient enough (above salience_floor) to MemoryTier::Semantic. +/// 3. Runs a global salience decay pass to age all nodes. +/// 4. Returns a report of what changed. +/// +/// This models the idea that memories become "knowledge" not by being told they +/// should be, but by being *used* — activated, reinforced, and found relevant +/// repeatedly over time. +use crate::error::EngramResult; +use crate::salience; +use crate::types::{MemoryTier, Node}; + +#[cfg(feature = "sled-backend")] +use crate::storage; +#[cfg(feature = "sled-backend")] +use crate::graph; +#[cfg(feature = "sled-backend")] +use sled::Db; + +#[cfg(feature = "wasm")] +use crate::mem_storage::MemStore; + +/// Configuration for a consolidation run. +#[derive(Debug, Clone)] +pub struct ConsolidationConfig { + /// Episodic nodes with activation_count >= this threshold are candidates for promotion. + pub episodic_to_semantic_threshold: u64, + /// Candidates must also have salience >= this floor to be promoted. + pub salience_floor: f32, + /// Maximum number of promotions per consolidation cycle (prevents runaway batch writes). + pub max_promotions_per_run: usize, + /// Decay factor applied to all node saliences after promotion (0.0–1.0). + pub decay_factor: f32, +} + +impl Default for ConsolidationConfig { + fn default() -> Self { + Self { + episodic_to_semantic_threshold: 5, + salience_floor: 0.3, + max_promotions_per_run: 50, + decay_factor: 0.98, + } + } +} + +/// Summary of what happened during a consolidation cycle. +#[derive(Debug, Default, Clone)] +pub struct ConsolidationReport { + /// Number of Episodic nodes promoted to Semantic. + pub promoted: usize, + /// Number of nodes whose salience was updated by the decay pass. + pub decayed: usize, + /// Number of nodes removed because their salience dropped below the minimum + /// (currently unused — pruning is opt-in in v0.1). + pub pruned: usize, +} + +// ── sled-backed consolidation ───────────────────────────────────────────────── + +#[cfg(feature = "sled-backend")] +/// Run a consolidation cycle against the open sled database. +pub fn consolidate(db: &Db, config: &ConsolidationConfig) -> EngramResult { + let mut report = ConsolidationReport::default(); + + // Step 1: scan all nodes, identify Episodic candidates. + let all_nodes: Vec = storage::scan_nodes(db)?; + + let mut promoted_count = 0usize; + + for mut node in all_nodes { + if node.tier != MemoryTier::Episodic { + continue; + } + + if node.activation_count >= config.episodic_to_semantic_threshold + && node.salience >= config.salience_floor + { + // Promote: change tier to Semantic and persist. + node.tier = MemoryTier::Semantic; + graph::put_node(db, &node)?; + promoted_count += 1; + + if promoted_count >= config.max_promotions_per_run { + break; + } + } + } + + report.promoted = promoted_count; + + // Step 2: global salience decay. + let all_nodes_post: Vec = storage::scan_nodes(db)?; + let mut decayed_count = 0usize; + for mut node in all_nodes_post { + let new_sal = salience::decay_salience(node.salience, config.decay_factor); + if new_sal != node.salience { + node.salience = new_sal; + storage::write_salience(db, node.id, new_sal)?; + graph::put_node(db, &node)?; + decayed_count += 1; + } + } + + report.decayed = decayed_count; + Ok(report) +} + +// ── in-memory consolidation (wasm) ──────────────────────────────────────────── + +#[cfg(feature = "wasm")] +/// Run a consolidation cycle against the in-memory store. +pub fn consolidate_mem( + store: &mut MemStore, + config: &ConsolidationConfig, +) -> EngramResult { + let mut report = ConsolidationReport::default(); + let mut promoted_count = 0usize; + + let all_ids: Vec = store.nodes.keys().copied().collect(); + + for id in &all_ids { + if promoted_count >= config.max_promotions_per_run { + break; + } + if let Some(node) = store.nodes.get_mut(id) { + if node.tier == MemoryTier::Episodic + && node.activation_count >= config.episodic_to_semantic_threshold + && node.salience >= config.salience_floor + { + node.tier = MemoryTier::Semantic; + promoted_count += 1; + } + } + } + + report.promoted = promoted_count; + + let mut decayed_count = 0usize; + for node in store.nodes.values_mut() { + let new_sal = salience::decay_salience(node.salience, config.decay_factor); + if new_sal != node.salience { + node.salience = new_sal; + decayed_count += 1; + } + } + + report.decayed = decayed_count; + Ok(report) +} + +// ── Tests ───────────────────────────────────────────────────────────────────── + +#[cfg(test)] +mod tests { + use super::*; + use crate::types::{MemoryTier, Node, NodeType}; + + fn episodic_node_with_activations(count: u64, salience: f32) -> Node { + let mut node = Node::new( + NodeType::Memory, + vec![0.5; 4], + b"test memory".to_vec(), + MemoryTier::Episodic, + 0.8, + ); + node.activation_count = count; + node.salience = salience; + node + } + + #[test] + fn default_config_sensible_values() { + let cfg = ConsolidationConfig::default(); + assert_eq!(cfg.episodic_to_semantic_threshold, 5); + assert!(cfg.salience_floor > 0.0); + assert!(cfg.max_promotions_per_run > 0); + assert!(cfg.decay_factor > 0.0 && cfg.decay_factor <= 1.0); + } + + #[test] + fn node_is_promotion_candidate() { + let cfg = ConsolidationConfig::default(); + let node = episodic_node_with_activations(10, 0.8); + let is_candidate = node.tier == MemoryTier::Episodic + && node.activation_count >= cfg.episodic_to_semantic_threshold + && node.salience >= cfg.salience_floor; + assert!(is_candidate); + } + + #[test] + fn node_below_threshold_not_candidate() { + let cfg = ConsolidationConfig::default(); + // activation_count below threshold + let node = episodic_node_with_activations(2, 0.8); + let is_candidate = node.tier == MemoryTier::Episodic + && node.activation_count >= cfg.episodic_to_semantic_threshold + && node.salience >= cfg.salience_floor; + assert!(!is_candidate); + } + + #[test] + fn node_below_salience_floor_not_candidate() { + let cfg = ConsolidationConfig::default(); + // salience below floor + let node = episodic_node_with_activations(10, 0.1); + let is_candidate = node.tier == MemoryTier::Episodic + && node.activation_count >= cfg.episodic_to_semantic_threshold + && node.salience >= cfg.salience_floor; + assert!(!is_candidate); + } + + #[test] + fn decay_reduces_salience() { + let original = 1.0f32; + let decayed = salience::decay_salience(original, 0.98); + assert!(decayed < original); + assert!((decayed - 0.98).abs() < 1e-6); + } + + #[test] + fn report_default_is_zero() { + let r = ConsolidationReport::default(); + assert_eq!(r.promoted, 0); + assert_eq!(r.decayed, 0); + assert_eq!(r.pruned, 0); + } + + #[cfg(feature = "sled-backend")] + #[test] + fn consolidate_promotes_eligible_episodic_nodes() { + use crate::graph; + + let dir = tempfile::tempdir().unwrap(); + let sled_db = sled::open(dir.path()).unwrap(); + + let node = episodic_node_with_activations(10, 0.8); + graph::put_node(&sled_db, &node).unwrap(); + + let cfg = ConsolidationConfig::default(); + let report = consolidate(&sled_db, &cfg).unwrap(); + + assert_eq!(report.promoted, 1); + + let stored = graph::get_node(&sled_db, node.id).unwrap().unwrap(); + assert_eq!(stored.tier, MemoryTier::Semantic); + } + + #[cfg(feature = "sled-backend")] + #[test] + fn consolidate_respects_max_promotions() { + use crate::graph; + + let dir = tempfile::tempdir().unwrap(); + let sled_db = sled::open(dir.path()).unwrap(); + + // Insert 10 eligible nodes. + for _ in 0..10 { + let node = episodic_node_with_activations(20, 0.9); + graph::put_node(&sled_db, &node).unwrap(); + } + + let cfg = ConsolidationConfig { + max_promotions_per_run: 3, + ..Default::default() + }; + let report = consolidate(&sled_db, &cfg).unwrap(); + assert_eq!(report.promoted, 3); + } + + #[cfg(feature = "sled-backend")] + #[test] + fn consolidate_runs_decay_after_promotion() { + use crate::graph; + + let dir = tempfile::tempdir().unwrap(); + let sled_db = sled::open(dir.path()).unwrap(); + + let node = Node::new( + NodeType::Concept, + vec![0.0; 4], + b"semantic".to_vec(), + MemoryTier::Semantic, + 0.5, + ); + let original_salience = node.salience; + graph::put_node(&sled_db, &node).unwrap(); + + let cfg = ConsolidationConfig::default(); + let report = consolidate(&sled_db, &cfg).unwrap(); + + assert!(report.decayed >= 1); + let stored = graph::get_node(&sled_db, node.id).unwrap().unwrap(); + assert!(stored.salience < original_salience); + } +} diff --git a/engram/crates/engram-core/src/db.rs b/engram/crates/engram-core/src/db.rs index 2b00983..f499a62 100644 --- a/engram/crates/engram-core/src/db.rs +++ b/engram/crates/engram-core/src/db.rs @@ -1,170 +1,428 @@ /// EngramDb — the top-level database handle. /// /// All public API methods live here. The internal modules (graph, vector, -/// activation, salience) are implementation details. Callers interact only -/// with EngramDb. -use crate::activation; -use crate::error::{EngramError, EngramResult}; -use crate::graph; -use crate::salience; -use crate::storage; -use crate::types::{ActivatedNode, Edge, Node, RelationType, ScoredNode}; -use crate::vector; -use sled::Db; -use std::path::Path; -use uuid::Uuid; +/// activation, salience, consolidation) are implementation details. Callers +/// interact only with EngramDb. +/// +/// # Feature flags +/// - `sled-backend` (default): persistent storage via sled +/// - `wasm`: in-memory storage only (no filesystem), for WASM targets -pub struct EngramDb { - db: Db, -} +// ── sled-backed implementation ──────────────────────────────────────────────── -impl EngramDb { - /// Open (or create) an engram database at the given path. - /// - /// The path should be a directory. Sled will create it if it doesn't exist. - pub fn open(path: &Path) -> EngramResult { - let db = sled::open(path)?; - Ok(Self { db }) +#[cfg(feature = "sled-backend")] +mod sled_impl { + use crate::activation; + use crate::consolidation::{self, ConsolidationConfig, ConsolidationReport}; + use crate::error::{EngramError, EngramResult}; + use crate::graph; + use crate::salience; + use crate::storage; + use crate::types::{ActivatedNode, Edge, Node, RelationType, ScoredNode}; + use crate::vector; + use sled::Db; + use std::path::Path; + use uuid::Uuid; + + pub struct EngramDb { + pub(crate) db: Db, } - // ── Node operations ─────────────────────────────────────────────────────── + impl EngramDb { + /// Open (or create) an engram database at the given path. + pub fn open(path: &Path) -> EngramResult { + let db = sled::open(path)?; + Ok(Self { db }) + } - /// Persist a node. Returns the node's UUID. - /// - /// If a node with the same ID already exists, it is overwritten. - pub fn put_node(&self, node: Node) -> EngramResult { - graph::put_node(&self.db, &node) - } + // ── Node operations ─────────────────────────────────────────────────── - /// Retrieve a node by UUID. Returns None if not found. - pub fn get_node(&self, id: Uuid) -> EngramResult> { - graph::get_node(&self.db, id) - } + /// Persist a node. Returns the node's UUID. + pub fn put_node(&self, node: Node) -> EngramResult { + let id = graph::put_node(&self.db, &node)?; + // Mark HNSW index dirty so next search rebuilds it. + vector::mark_dirty(&self.db); + Ok(id) + } - // ── Edge operations ─────────────────────────────────────────────────────── - - /// Persist a directed edge between two nodes. - pub fn put_edge(&self, edge: Edge) -> EngramResult<()> { - graph::put_edge(&self.db, &edge) - } - - /// All edges originating from a node. - pub fn get_edges_from(&self, from_id: Uuid) -> EngramResult> { - graph::edges_from(&self.db, from_id) - } - - /// All edges pointing to a node. - pub fn get_edges_to(&self, to_id: Uuid) -> EngramResult> { - graph::edges_to(&self.db, to_id) - } - - // ── Vector search ───────────────────────────────────────────────────────── - - /// Find the `limit` nodes whose embeddings are most similar to `embedding`. - /// - /// Uses flat cosine scan — O(n), correct for < 100k nodes. - pub fn search_embedding(&self, embedding: &[f32], limit: usize) -> EngramResult> { - vector::search_embedding(&self.db, embedding, limit, |id| { + /// Retrieve a node by UUID. Returns None if not found. + pub fn get_node(&self, id: Uuid) -> EngramResult> { graph::get_node(&self.db, id) - }) - } - - // ── Spreading activation ────────────────────────────────────────────────── - - /// Run spreading activation from a set of seed nodes. - /// - /// Activation propagates outward through the graph. At each hop, strength - /// is attenuated by edge weight, target salience, and semantic similarity - /// to `query_embedding`. The top-`limit` nodes by activation strength are returned. - /// - /// See `activation.rs` for a full description of the algorithm. - pub fn activate( - &self, - seeds: &[Uuid], - query_embedding: &[f32], - max_depth: u8, - limit: usize, - ) -> EngramResult> { - activation::activate(&self.db, seeds, query_embedding, max_depth, limit) - } - - // ── Graph traversal ─────────────────────────────────────────────────────── - - /// BFS traversal from `from`, following edges up to `max_depth` hops. - /// - /// If `relation` is specified, only edges of that type are followed. - /// The seed node itself is excluded from the result. - pub fn traverse( - &self, - from: Uuid, - relation: Option, - max_depth: u8, - ) -> EngramResult> { - graph::traverse(&self.db, from, relation, max_depth) - } - - // ── Salience management ─────────────────────────────────────────────────── - - /// Mark a node as recently activated — update last_activated, increment - /// activation_count, and recompute salience. - /// - /// Call this whenever a node is surfaced during retrieval so that - /// frequently-used nodes accumulate higher salience over time. - pub fn touch(&self, id: Uuid) -> EngramResult<()> { - let mut node = graph::get_node(&self.db, id)?.ok_or(EngramError::NotFound(id))?; - node.last_activated = crate::types::now_ms(); - node.activation_count += 1; - node.salience = salience::compute_salience( - node.importance, - node.last_activated, - node.activation_count, - ); - graph::put_node(&self.db, &node)?; - Ok(()) - } - - /// Apply a multiplicative decay to the salience of every node in the store. - /// - /// `factor` should be in (0.0, 1.0). A factor of 0.95 decays salience by 5%. - /// Returns the number of nodes updated. - /// - /// This models the adaptive nature of forgetting: nodes that haven't been - /// activated recently become less salient over time, making room for new - /// associations. - pub fn decay(&self, factor: f32) -> EngramResult { - if !(0.0..=1.0).contains(&factor) { - return Err(EngramError::InvalidParam(format!( - "decay factor must be in [0.0, 1.0], got {}", - factor - ))); } - let nodes = storage::scan_nodes(&self.db)?; - let mut count = 0usize; - for mut node in nodes { - let new_salience = salience::decay_salience(node.salience, factor); - // Always write if salience changed at all (decay always changes it - // unless the node is already at zero) - if new_salience != node.salience { - node.salience = new_salience; - storage::write_salience(&self.db, node.id, new_salience)?; - // Also update the full node record so future reads are consistent - graph::put_node(&self.db, &node)?; - count += 1; + // ── Edge operations ─────────────────────────────────────────────────── + + /// Persist a directed edge between two nodes. + pub fn put_edge(&self, edge: Edge) -> EngramResult<()> { + graph::put_edge(&self.db, &edge) + } + + /// All edges originating from a node. + pub fn get_edges_from(&self, from_id: Uuid) -> EngramResult> { + graph::edges_from(&self.db, from_id) + } + + /// All edges pointing to a node. + pub fn get_edges_to(&self, to_id: Uuid) -> EngramResult> { + graph::edges_to(&self.db, to_id) + } + + // ── Vector search ───────────────────────────────────────────────────── + + /// Find the `limit` nodes whose embeddings are most similar to `embedding`. + /// + /// Falls back to flat scan for stores with < 100 nodes. + /// Uses the HNSW index for larger stores. + pub fn search_embedding( + &self, + embedding: &[f32], + limit: usize, + ) -> EngramResult> { + vector::search_embedding(&self.db, embedding, limit, |id| { + graph::get_node(&self.db, id) + }) + } + + /// Explicitly build (or rebuild) the HNSW index. + /// + /// This is not normally needed — the index is built lazily on first search. + /// Call this if you want to pre-warm the index after a large batch insert. + /// + /// Returns the number of nodes indexed. + pub fn build_index(&self) -> EngramResult { + vector::build_index(&self.db) + } + + // ── Spreading activation ────────────────────────────────────────────── + + /// Run spreading activation from a set of seed nodes. + pub fn activate( + &self, + seeds: &[Uuid], + query_embedding: &[f32], + max_depth: u8, + limit: usize, + ) -> EngramResult> { + activation::activate(&self.db, seeds, query_embedding, max_depth, limit) + } + + // ── Graph traversal ─────────────────────────────────────────────────── + + /// BFS traversal from `from`, following edges up to `max_depth` hops. + pub fn traverse( + &self, + from: Uuid, + relation: Option, + max_depth: u8, + ) -> EngramResult> { + graph::traverse(&self.db, from, relation, max_depth) + } + + // ── Salience management ─────────────────────────────────────────────── + + /// Mark a node as recently activated — update last_activated, increment + /// activation_count, and recompute salience. + pub fn touch(&self, id: Uuid) -> EngramResult<()> { + let mut node = + graph::get_node(&self.db, id)?.ok_or(EngramError::NotFound(id))?; + node.last_activated = crate::types::now_ms(); + node.activation_count += 1; + node.salience = salience::compute_salience( + node.importance, + node.last_activated, + node.activation_count, + ); + graph::put_node(&self.db, &node)?; + Ok(()) + } + + /// Apply a multiplicative decay to the salience of every node in the store. + /// + /// `factor` should be in (0.0, 1.0). Returns the number of nodes updated. + pub fn decay(&self, factor: f32) -> EngramResult { + if !(0.0..=1.0).contains(&factor) { + return Err(EngramError::InvalidParam(format!( + "decay factor must be in [0.0, 1.0], got {}", + factor + ))); } + + let nodes = storage::scan_nodes(&self.db)?; + let mut count = 0usize; + for mut node in nodes { + let new_salience = salience::decay_salience(node.salience, factor); + if new_salience != node.salience { + node.salience = new_salience; + storage::write_salience(&self.db, node.id, new_salience)?; + graph::put_node(&self.db, &node)?; + count += 1; + } + } + Ok(count) } - Ok(count) - } - // ── Statistics ──────────────────────────────────────────────────────────── + // ── Consolidation ───────────────────────────────────────────────────── - /// Total number of nodes stored. - pub fn node_count(&self) -> EngramResult { - graph::node_count(&self.db) - } + /// Run a memory consolidation cycle. + /// + /// Promotes Episodic nodes that have been activated enough times and are + /// still salient enough to MemoryTier::Semantic. Then decays all saliences. + /// + /// See `consolidation::ConsolidationConfig` for tuning knobs. + pub fn consolidate( + &self, + config: &ConsolidationConfig, + ) -> EngramResult { + consolidation::consolidate(&self.db, config) + } - /// Total number of edges stored (each directed edge counted once). - pub fn edge_count(&self) -> EngramResult { - graph::edge_count(&self.db) + // ── Statistics ──────────────────────────────────────────────────────── + + /// Total number of nodes stored. + pub fn node_count(&self) -> EngramResult { + graph::node_count(&self.db) + } + + /// Total number of edges stored. + pub fn edge_count(&self) -> EngramResult { + graph::edge_count(&self.db) + } } } + +// ── WASM / in-memory implementation ────────────────────────────────────────── + +#[cfg(feature = "wasm")] +mod wasm_impl { + use crate::consolidation::{self, ConsolidationConfig, ConsolidationReport}; + use crate::error::{EngramError, EngramResult}; + use crate::mem_storage::MemStore; + use crate::salience; + use crate::types::{ActivatedNode, Edge, Node, RelationType, ScoredNode}; + use crate::vector; + use std::collections::{BinaryHeap, HashMap, HashSet, VecDeque}; + use std::sync::RwLock; + use uuid::Uuid; + + pub struct EngramDb { + pub(crate) store: RwLock, + } + + impl EngramDb { + /// Create an in-memory engram database. The `path` argument is ignored in WASM mode. + pub fn open(_path: &std::path::Path) -> EngramResult { + Ok(Self { + store: RwLock::new(MemStore::new()), + }) + } + + // ── Node operations ─────────────────────────────────────────────────── + + pub fn put_node(&self, node: Node) -> EngramResult { + let id = node.id; + self.store + .write() + .map_err(|_| EngramError::InvalidParam("lock poisoned".into()))? + .write_node(&node)?; + Ok(id) + } + + pub fn get_node(&self, id: Uuid) -> EngramResult> { + self.store + .read() + .map_err(|_| EngramError::InvalidParam("lock poisoned".into()))? + .read_node(id) + } + + // ── Edge operations ─────────────────────────────────────────────────── + + pub fn put_edge(&self, edge: Edge) -> EngramResult<()> { + self.store + .write() + .map_err(|_| EngramError::InvalidParam("lock poisoned".into()))? + .write_edge(&edge) + } + + pub fn get_edges_from(&self, from_id: Uuid) -> EngramResult> { + self.store + .read() + .map_err(|_| EngramError::InvalidParam("lock poisoned".into()))? + .read_edges_from(from_id) + } + + pub fn get_edges_to(&self, to_id: Uuid) -> EngramResult> { + self.store + .read() + .map_err(|_| EngramError::InvalidParam("lock poisoned".into()))? + .read_edges_to(to_id) + } + + // ── Vector search ───────────────────────────────────────────────────── + + pub fn search_embedding( + &self, + embedding: &[f32], + limit: usize, + ) -> EngramResult> { + let store = self + .store + .read() + .map_err(|_| EngramError::InvalidParam("lock poisoned".into()))?; + let vectors = store.scan_vectors()?; + let nodes_snap: HashMap = store.nodes.clone(); + drop(store); + + vector::search_embedding_memory(embedding, limit, &vectors, |id| { + Ok(nodes_snap.get(&id).cloned()) + }) + } + + /// No-op in WASM mode (flat scan is always used). Returns node count. + pub fn build_index(&self) -> EngramResult { + self.node_count() + } + + // ── Spreading activation ────────────────────────────────────────────── + + pub fn activate( + &self, + seeds: &[Uuid], + query_embedding: &[f32], + max_depth: u8, + limit: usize, + ) -> EngramResult> { + use crate::activation; + let store = self + .store + .read() + .map_err(|_| EngramError::InvalidParam("lock poisoned".into()))?; + activation::activate_mem(&store, seeds, query_embedding, max_depth, limit) + } + + // ── Graph traversal ─────────────────────────────────────────────────── + + pub fn traverse( + &self, + from: Uuid, + relation: Option, + max_depth: u8, + ) -> EngramResult> { + let store = self + .store + .read() + .map_err(|_| EngramError::InvalidParam("lock poisoned".into()))?; + let mut visited: HashSet = HashSet::new(); + let mut queue: VecDeque<(Uuid, u8)> = VecDeque::new(); + let mut result: Vec = Vec::new(); + + visited.insert(from); + queue.push_back((from, 0)); + + while let Some((current_id, depth)) = queue.pop_front() { + if depth >= max_depth { + continue; + } + let edges = store.read_edges_from(current_id)?; + for edge in edges { + if let Some(ref rel) = relation { + if &edge.relation != rel { + continue; + } + } + let next = edge.to_id; + if visited.contains(&next) { + continue; + } + visited.insert(next); + if let Some(node) = store.read_node(next)? { + result.push(node); + queue.push_back((next, depth + 1)); + } + } + } + Ok(result) + } + + // ── Salience management ─────────────────────────────────────────────── + + pub fn touch(&self, id: Uuid) -> EngramResult<()> { + let mut store = self + .store + .write() + .map_err(|_| EngramError::InvalidParam("lock poisoned".into()))?; + let node = store + .nodes + .get_mut(&id) + .ok_or(EngramError::NotFound(id))?; + node.last_activated = crate::types::now_ms(); + node.activation_count += 1; + node.salience = salience::compute_salience( + node.importance, + node.last_activated, + node.activation_count, + ); + Ok(()) + } + + pub fn decay(&self, factor: f32) -> EngramResult { + if !(0.0..=1.0).contains(&factor) { + return Err(EngramError::InvalidParam(format!( + "decay factor must be in [0.0, 1.0], got {}", + factor + ))); + } + let mut store = self + .store + .write() + .map_err(|_| EngramError::InvalidParam("lock poisoned".into()))?; + let mut count = 0usize; + for node in store.nodes.values_mut() { + let new_sal = salience::decay_salience(node.salience, factor); + if new_sal != node.salience { + node.salience = new_sal; + count += 1; + } + } + Ok(count) + } + + // ── Consolidation ───────────────────────────────────────────────────── + + pub fn consolidate( + &self, + config: &ConsolidationConfig, + ) -> EngramResult { + let mut store = self + .store + .write() + .map_err(|_| EngramError::InvalidParam("lock poisoned".into()))?; + consolidation::consolidate_mem(&mut store, config) + } + + // ── Statistics ──────────────────────────────────────────────────────── + + pub fn node_count(&self) -> EngramResult { + Ok(self + .store + .read() + .map_err(|_| EngramError::InvalidParam("lock poisoned".into()))? + .node_count()) + } + + pub fn edge_count(&self) -> EngramResult { + Ok(self + .store + .read() + .map_err(|_| EngramError::InvalidParam("lock poisoned".into()))? + .edge_count()) + } + } +} + +// ── Re-export the right impl ────────────────────────────────────────────────── + +#[cfg(feature = "sled-backend")] +pub use sled_impl::EngramDb; + +#[cfg(feature = "wasm")] +pub use wasm_impl::EngramDb; diff --git a/engram/crates/engram-core/src/lib.rs b/engram/crates/engram-core/src/lib.rs index 2777b56..0404456 100644 --- a/engram/crates/engram-core/src/lib.rs +++ b/engram/crates/engram-core/src/lib.rs @@ -30,13 +30,19 @@ /// } /// ``` pub mod activation; +pub mod consolidation; pub mod db; pub mod error; pub mod graph; pub mod salience; +#[cfg(not(feature = "wasm"))] pub mod storage; +#[cfg(feature = "wasm")] +pub mod mem_storage; pub mod types; pub mod vector; +#[cfg(feature = "migration")] +pub mod migration; // Re-export the public surface pub use db::EngramDb; @@ -44,3 +50,4 @@ pub use error::{EngramError, EngramResult}; pub use types::{ ActivatedNode, Edge, MemoryTier, Node, NodeType, RelationType, ScoredNode, now_ms, }; +pub use consolidation::{ConsolidationConfig, ConsolidationReport}; diff --git a/engram/crates/engram-core/src/mem_storage.rs b/engram/crates/engram-core/src/mem_storage.rs new file mode 100644 index 0000000..ac6721b --- /dev/null +++ b/engram/crates/engram-core/src/mem_storage.rs @@ -0,0 +1,99 @@ +/// In-memory storage backend for environments without a filesystem. +/// +/// Used when the `wasm` feature is enabled (e.g. browser via wasm-bindgen). +/// Implements the same logical interface as the sled-backed `storage` module +/// so that `EngramDb` can work identically in both environments. +/// +/// All state lives in a `MemStore` that is held by `EngramDb` under a `RwLock` +/// so concurrent reads are fine and writes are serialised. +use crate::error::{EngramError, EngramResult}; +use crate::types::{Edge, Node}; +use std::collections::HashMap; +use uuid::Uuid; + +#[derive(Default)] +pub struct MemStore { + pub nodes: HashMap, + /// from_id → list of edges + pub edges_from: HashMap>, + /// to_id → list of edges + pub edges_to: HashMap>, +} + +impl MemStore { + pub fn new() -> Self { + Self::default() + } + + // ── Node operations ─────────────────────────────────────────────────────── + + pub fn write_node(&mut self, node: &Node) -> EngramResult<()> { + self.nodes.insert(node.id, node.clone()); + Ok(()) + } + + pub fn read_node(&self, id: Uuid) -> EngramResult> { + Ok(self.nodes.get(&id).cloned()) + } + + pub fn scan_nodes(&self) -> EngramResult> { + Ok(self.nodes.values().cloned().collect()) + } + + pub fn node_count(&self) -> usize { + self.nodes.len() + } + + // ── Edge operations ─────────────────────────────────────────────────────── + + pub fn write_edge(&mut self, edge: &Edge) -> EngramResult<()> { + self.edges_from + .entry(edge.from_id) + .or_default() + .push(edge.clone()); + self.edges_to + .entry(edge.to_id) + .or_default() + .push(edge.clone()); + Ok(()) + } + + pub fn read_edges_from(&self, from_id: Uuid) -> EngramResult> { + Ok(self + .edges_from + .get(&from_id) + .cloned() + .unwrap_or_default()) + } + + pub fn read_edges_to(&self, to_id: Uuid) -> EngramResult> { + Ok(self + .edges_to + .get(&to_id) + .cloned() + .unwrap_or_default()) + } + + pub fn edge_count(&self) -> usize { + self.edges_from.values().map(|v| v.len()).sum() + } + + // ── Vector operations ───────────────────────────────────────────────────── + + pub fn scan_vectors(&self) -> EngramResult)>> { + Ok(self + .nodes + .iter() + .map(|(id, n)| (*id, n.embedding.clone())) + .collect()) + } + + // ── Salience ────────────────────────────────────────────────────────────── + + pub fn write_salience(&mut self, id: Uuid, salience: f32) -> EngramResult<()> { + if let Some(node) = self.nodes.get_mut(&id) { + node.salience = salience; + } + Ok(()) + } +} diff --git a/engram/crates/engram-core/src/migration.rs b/engram/crates/engram-core/src/migration.rs new file mode 100644 index 0000000..016e708 --- /dev/null +++ b/engram/crates/engram-core/src/migration.rs @@ -0,0 +1,420 @@ +/// Migration connector — imports Neuron's SQLite database into Engram. +/// +/// Neuron stores memories, knowledge, and graph nodes in a SQLite database. +/// This module reads that database and converts records to Engram nodes and edges. +/// +/// # Schema mapping +/// +/// | Neuron table | Engram node | +/// |----------------------|----------------------------------------------| +/// | `memory_nodes` | `Node { tier: Episodic, node_type: Memory }` | +/// | `knowledge_entries` | `Node { tier: Semantic, node_type: Concept }` | +/// +/// Edges from `graph_edges` (type = "supersedes" or "Supersedes") are converted +/// to `Edge { relation: RelationType::Supersedes }`. Other edge types become +/// `RelationType::References`. +/// +/// # Embeddings +/// +/// Neuron does not currently expose embeddings through the SQLite schema. +/// Random unit vectors are generated as placeholders. Replace the call to +/// `placeholder_embedding` with your embedding model once the ONNX engine is wired in. +/// +/// TODO: wire in real embeddings from all-MiniLM-L6-v2 via the ONNX runtime. + +use crate::error::{EngramError, EngramResult}; +use crate::types::{Edge, MemoryTier, Node, NodeType, RelationType}; +use rusqlite::{Connection, OpenFlags}; +use std::collections::HashMap; +use std::path::PathBuf; +use uuid::Uuid; + +// ── Config and report ───────────────────────────────────────────────────────── + +/// Configuration for a Neuron → Engram migration. +pub struct MigrationConfig { + /// Path to `~/.neuron/neuron.db` (or any other Neuron SQLite file). + pub sqlite_path: PathBuf, + /// Path where the new Engram sled store will be created. + pub engram_path: PathBuf, + /// Dimensionality of placeholder embeddings. + /// Default: 384 (matches all-MiniLM-L6-v2). + pub embedding_dim: usize, +} + +impl MigrationConfig { + pub fn new(sqlite_path: PathBuf, engram_path: PathBuf) -> Self { + Self { + sqlite_path, + engram_path, + embedding_dim: 384, + } + } +} + +/// Summary of what was imported during migration. +#[derive(Debug, Default)] +pub struct MigrationReport { + /// Rows imported from `memory_nodes`. + pub memories_migrated: usize, + /// Rows imported from `knowledge_entries`. + pub knowledge_migrated: usize, + /// Edges created from `graph_edges`. + pub edges_created: usize, + /// Non-fatal errors collected during the run. + pub errors: Vec, +} + +// ── Main entry point ────────────────────────────────────────────────────────── + +/// Read the Neuron SQLite database at `config.sqlite_path` and import all +/// records into a new Engram sled store at `config.engram_path`. +/// +/// Returns a `MigrationReport` describing what was imported. +/// +/// Non-fatal errors (e.g. a single unreadable row) are collected in +/// `report.errors` rather than aborting the entire migration. +pub fn migrate_from_neuron(config: &MigrationConfig) -> EngramResult { + let conn = Connection::open_with_flags( + &config.sqlite_path, + OpenFlags::SQLITE_OPEN_READ_ONLY | OpenFlags::SQLITE_OPEN_NO_MUTEX, + ) + .map_err(|e| EngramError::InvalidParam(format!("Cannot open SQLite: {e}")))?; + + let engram_db = crate::db::EngramDb::open(&config.engram_path)?; + + let mut report = MigrationReport::default(); + + // Maps Neuron string IDs to the Engram UUIDs we assigned. + let mut id_map: HashMap = HashMap::new(); + + // ── Import memory_nodes ─────────────────────────────────────────────────── + { + let mut stmt = conn + .prepare( + "SELECT id, content, importance, superseded_by, created_at \ + FROM memory_nodes ORDER BY created_at ASC", + ) + .map_err(|e| EngramError::InvalidParam(format!("prepare memory_nodes: {e}")))?; + + let rows = stmt + .query_map([], |row| { + Ok(( + row.get::<_, String>(0)?, // id + row.get::<_, String>(1)?, // content + row.get::<_, String>(2)?, // importance + row.get::<_, Option>(3)?, // superseded_by + row.get::<_, i64>(4)?, // created_at + )) + }) + .map_err(|e| EngramError::InvalidParam(format!("query memory_nodes: {e}")))?; + + for row_result in rows { + match row_result { + Ok((neuron_id, content, importance_str, _superseded_by, _created_at)) => { + let importance = importance_string_to_f32(&importance_str); + let embedding = placeholder_embedding(config.embedding_dim); + + let node = Node::new( + NodeType::Memory, + embedding, + content.into_bytes(), + MemoryTier::Episodic, + importance, + ); + + match engram_db.put_node(node.clone()) { + Ok(uuid) => { + id_map.insert(neuron_id, uuid); + report.memories_migrated += 1; + } + Err(e) => { + report.errors.push(format!("put_node memory {neuron_id}: {e}")); + } + } + } + Err(e) => { + report.errors.push(format!("read memory row: {e}")); + } + } + } + } + + // ── Import knowledge_entries ────────────────────────────────────────────── + { + let mut stmt = conn + .prepare( + "SELECT id, title, content, tier, created_at \ + FROM knowledge_entries ORDER BY created_at ASC", + ) + .map_err(|e| EngramError::InvalidParam(format!("prepare knowledge_entries: {e}")))?; + + let rows = stmt + .query_map([], |row| { + Ok(( + row.get::<_, String>(0)?, // id + row.get::<_, String>(1)?, // title + row.get::<_, String>(2)?, // content + row.get::<_, String>(3)?, // tier + row.get::<_, i64>(4)?, // created_at + )) + }) + .map_err(|e| EngramError::InvalidParam(format!("query knowledge_entries: {e}")))?; + + for row_result in rows { + match row_result { + Ok((neuron_id, title, body, _tier_str, _created_at)) => { + // Combine title + content as the engram node content. + let combined = format!("{title}\n\n{body}"); + let embedding = placeholder_embedding(config.embedding_dim); + + let node = Node::new( + NodeType::Concept, + embedding, + combined.into_bytes(), + MemoryTier::Semantic, + 0.75, // knowledge is moderately important by default + ); + + match engram_db.put_node(node.clone()) { + Ok(uuid) => { + id_map.insert(neuron_id, uuid); + report.knowledge_migrated += 1; + } + Err(e) => { + report.errors.push(format!( + "put_node knowledge {neuron_id}: {e}" + )); + } + } + } + Err(e) => { + report.errors.push(format!("read knowledge row: {e}")); + } + } + } + } + + // ── Import graph_edges ──────────────────────────────────────────────────── + { + // Only import edges where both endpoints ended up in our id_map. + let mut stmt = conn + .prepare( + "SELECT from_id, to_id, edge_type, weight FROM graph_edges", + ) + .map_err(|e| EngramError::InvalidParam(format!("prepare graph_edges: {e}")))?; + + let rows = stmt + .query_map([], |row| { + Ok(( + row.get::<_, String>(0)?, // from_id + row.get::<_, String>(1)?, // to_id + row.get::<_, String>(2)?, // edge_type + row.get::<_, f64>(3)?, // weight + )) + }) + .map_err(|e| EngramError::InvalidParam(format!("query graph_edges: {e}")))?; + + for row_result in rows { + match row_result { + Ok((from_str, to_str, edge_type, weight)) => { + let from_uuid = match id_map.get(&from_str) { + Some(u) => *u, + None => continue, // endpoint not migrated, skip + }; + let to_uuid = match id_map.get(&to_str) { + Some(u) => *u, + None => continue, + }; + + let relation = edge_type_to_relation(&edge_type); + let edge = Edge::new(from_uuid, to_uuid, relation, weight as f32); + + match engram_db.put_edge(edge) { + Ok(()) => report.edges_created += 1, + Err(e) => { + report.errors.push(format!( + "put_edge {from_str} → {to_str}: {e}" + )); + } + } + } + Err(e) => { + report.errors.push(format!("read edge row: {e}")); + } + } + } + } + + Ok(report) +} + +// ── Helpers ─────────────────────────────────────────────────────────────────── + +/// Convert Neuron's text importance level to a float score. +fn importance_string_to_f32(importance: &str) -> f32 { + match importance.to_lowercase().as_str() { + "critical" => 1.0, + "high" => 0.85, + "normal" | "medium" => 0.5, + "low" => 0.25, + _ => { + // Try parsing directly as a float. + importance.parse::().unwrap_or(0.5).clamp(0.0, 1.0) + } + } +} + +/// Convert a Neuron edge type string to an Engram RelationType. +fn edge_type_to_relation(edge_type: &str) -> RelationType { + match edge_type.to_lowercase().as_str() { + "supersedes" | "superseded_by" => RelationType::Supersedes, + "causes" | "caused_by" => RelationType::Causes, + "contains" | "contained_by" => RelationType::Contains, + "references" | "referenced_by" => RelationType::References, + "contradicts" => RelationType::Contradicts, + "exemplifies" | "exemplified_by" => RelationType::Exemplifies, + "activates" => RelationType::Activates, + "temporally_precedes" | "follows" => RelationType::TemporallyPrecedes, + _ => RelationType::References, // safe default + } +} + +/// Generate a pseudo-random unit vector of the given dimension as a placeholder embedding. +/// +/// Uses a simple xorshift64 PRNG seeded from the current time. The result is +/// semantically meaningless — it only satisfies the schema requirement that +/// every node has an embedding vector. +/// +/// TODO: replace with actual embeddings from all-MiniLM-L6-v2 via ONNX runtime +/// once the embedding engine is wired in. +pub fn placeholder_embedding(dim: usize) -> Vec { + // Seed from subsecond wall time for reasonable entropy across calls. + let mut state: u64 = std::time::SystemTime::now() + .duration_since(std::time::UNIX_EPOCH) + .unwrap_or_default() + .subsec_nanos() as u64 + | 1; // ensure non-zero + + // xorshift64 — no overflow risk, passes statistical tests well enough for placeholders. + let mut xorshift = || -> f32 { + state ^= state << 13; + state ^= state >> 7; + state ^= state << 17; + // Map to [-1, 1] + (state as f32 / u64::MAX as f32) * 2.0 - 1.0 + }; + + let mut raw: Vec = (0..dim).map(|_| xorshift()).collect(); + + // Normalise to unit length. + let norm: f32 = raw.iter().map(|x| x * x).sum::().sqrt(); + if norm > 0.0 { + for x in &mut raw { + *x /= norm; + } + } + raw +} + +// ── Tests ───────────────────────────────────────────────────────────────────── + +#[cfg(test)] +mod tests { + use super::*; + + #[test] + fn importance_string_critical() { + assert!((importance_string_to_f32("critical") - 1.0).abs() < 1e-6); + } + + #[test] + fn importance_string_normal() { + assert!((importance_string_to_f32("normal") - 0.5).abs() < 1e-6); + } + + #[test] + fn importance_string_unknown_defaults_to_half() { + assert!((importance_string_to_f32("???") - 0.5).abs() < 1e-6); + } + + #[test] + fn edge_type_supersedes() { + assert_eq!(edge_type_to_relation("supersedes"), RelationType::Supersedes); + } + + #[test] + fn edge_type_unknown_is_references() { + assert_eq!(edge_type_to_relation("foobar"), RelationType::References); + } + + #[test] + fn placeholder_embedding_correct_length() { + let emb = placeholder_embedding(384); + assert_eq!(emb.len(), 384); + } + + #[test] + fn placeholder_embedding_is_unit_vector() { + let emb = placeholder_embedding(128); + let norm: f32 = emb.iter().map(|x| x * x).sum::().sqrt(); + assert!((norm - 1.0).abs() < 1e-4); + } + + #[test] + fn migrate_from_in_memory_db() { + // Build a minimal SQLite DB in a temp dir and migrate it. + let dir = tempfile::tempdir().unwrap(); + let db_path = dir.path().join("test.db"); + let engram_path = dir.path().join("engram"); + + // Create minimal Neuron-like schema and insert a couple of rows. + let conn = Connection::open(&db_path).unwrap(); + conn.execute_batch( + "CREATE TABLE memory_nodes ( + id TEXT PRIMARY KEY, content TEXT NOT NULL, importance TEXT NOT NULL DEFAULT 'normal', + superseded_by TEXT, created_at INTEGER NOT NULL, updated_at INTEGER NOT NULL + ); + CREATE TABLE knowledge_entries ( + id TEXT PRIMARY KEY, title TEXT NOT NULL, content TEXT NOT NULL, + category TEXT NOT NULL DEFAULT '', tier TEXT NOT NULL DEFAULT 'note', + tags TEXT NOT NULL DEFAULT '', created_at INTEGER NOT NULL, updated_at INTEGER NOT NULL + ); + CREATE TABLE graph_edges ( + from_id TEXT NOT NULL, from_type TEXT NOT NULL, + to_id TEXT NOT NULL, to_type TEXT NOT NULL, + edge_type TEXT NOT NULL, weight REAL NOT NULL DEFAULT 1.0, + PRIMARY KEY (from_id, to_id, edge_type) + );", + ) + .unwrap(); + + conn.execute( + "INSERT INTO memory_nodes (id, content, importance, created_at, updated_at) + VALUES ('mem-1', 'First memory', 'high', 1000, 1000)", + [], + ) + .unwrap(); + + conn.execute( + "INSERT INTO knowledge_entries (id, title, content, created_at, updated_at) + VALUES ('kn-1', 'Some concept', 'Body text.', 2000, 2000)", + [], + ) + .unwrap(); + + drop(conn); // close before migrating + + let config = MigrationConfig { + sqlite_path: db_path, + engram_path, + embedding_dim: 16, + }; + + let report = migrate_from_neuron(&config).unwrap(); + assert_eq!(report.memories_migrated, 1); + assert_eq!(report.knowledge_migrated, 1); + assert_eq!(report.edges_created, 0); // no edges in the test DB + assert!(report.errors.is_empty()); + } +} diff --git a/engram/crates/engram-core/src/salience.rs b/engram/crates/engram-core/src/salience.rs index 99480f0..d06b43e 100644 --- a/engram/crates/engram-core/src/salience.rs +++ b/engram/crates/engram-core/src/salience.rs @@ -9,7 +9,7 @@ /// Things that aren't activated decay toward zero — not because they are lost, but because /// they are no longer relevant to current cognition. This is how biological memory works. /// -/// ``` +/// ```text /// salience = importance × (1 / (1 + days_since_activation)) × ln(activation_count + 1) /// ``` /// diff --git a/engram/crates/engram-core/src/types.rs b/engram/crates/engram-core/src/types.rs index 8ee32a3..a7125ae 100644 --- a/engram/crates/engram-core/src/types.rs +++ b/engram/crates/engram-core/src/types.rs @@ -129,6 +129,12 @@ impl Node { importance, } } + + /// Override the node's UUID. Used in tests and deserialization helpers. + pub fn with_id(mut self, id: Uuid) -> Self { + self.id = id; + self + } } /// A node returned from spreading activation, annotated with how strongly diff --git a/engram/crates/engram-core/src/vector.rs b/engram/crates/engram-core/src/vector.rs index 7f890c0..6b7e401 100644 --- a/engram/crates/engram-core/src/vector.rs +++ b/engram/crates/engram-core/src/vector.rs @@ -1,24 +1,58 @@ /// Vector similarity search over stored node embeddings. /// -/// v0.1 uses a flat cosine scan — O(n) but correct and dependency-free. -/// For < 100k nodes this is adequate. Future versions will layer in HNSW -/// once the graph structure itself is validated. +/// Strategy: +/// - For < HNSW_THRESHOLD indexed nodes: flat O(n) cosine scan (correct, no deps) +/// - For >= HNSW_THRESHOLD nodes: HNSW approximate nearest-neighbour index /// -/// Cosine similarity between two vectors A and B: -/// cos(θ) = (A · B) / (|A| × |B|) +/// The HNSW index is built lazily on first search call when the graph is large +/// enough. A "dirty" flag in sled (`hnsw:dirty`) is set to 1 whenever `put_node` +/// adds an embedding; on the next search the index is rebuilt from the current +/// store. For small graphs (< threshold) the flat scan is always used — it is +/// fast enough and avoids the overhead of HNSW construction. /// -/// We return 0.0 when either vector has zero norm (degenerate case). -use crate::error::{EngramError, EngramResult}; +/// Cosine similarity: cos(θ) = (A · B) / (|A| × |B|) +/// instant-distance expects a *distance* metric (lower = closer), so we expose: +/// distance = 1 − cosine_similarity, clamped to [0, 2] + +#[cfg(feature = "sled-backend")] use crate::storage; -use crate::types::{Node, ScoredNode}; +#[cfg(feature = "sled-backend")] use sled::Db; + +use crate::error::EngramResult; +use crate::types::{Node, ScoredNode}; +use instant_distance::{Builder, HnswMap, Search}; +use serde::{Deserialize, Serialize}; use uuid::Uuid; +/// Minimum number of nodes before we switch from flat scan to HNSW. +const HNSW_THRESHOLD: usize = 100; + +/// sled key used to store the dirty flag (1 = needs rebuild, 0 = clean). +#[cfg(feature = "sled-backend")] +const HNSW_DIRTY_KEY: &[u8] = b"hnsw:dirty"; + +// ── Point wrapper ───────────────────────────────────────────────────────────── + +/// An f32 embedding vector treated as an HNSW point. +/// +/// The distance metric is `1 − cosine_similarity` so that instant-distance +/// (which minimises distance) finds the most similar vectors. +#[derive(Clone, Debug, Serialize, Deserialize)] +pub struct EmbeddingPoint(pub Vec); + +impl instant_distance::Point for EmbeddingPoint { + fn distance(&self, other: &Self) -> f32 { + let sim = cosine_similarity(&self.0, &other.0); + (1.0 - sim).clamp(0.0, 2.0) + } +} + +// ── Public similarity helper ────────────────────────────────────────────────── + /// Compute the cosine similarity between two equal-length f32 slices. /// /// Returns a value in [-1.0, 1.0], where 1.0 means identical direction. -/// For normalized embeddings (unit vectors) the dot product alone is sufficient, -/// but we compute full cosine here to be robust to unnormalized inputs. pub fn cosine_similarity(a: &[f32], b: &[f32]) -> f32 { if a.len() != b.len() || a.is_empty() { return 0.0; @@ -32,42 +66,72 @@ pub fn cosine_similarity(a: &[f32], b: &[f32]) -> f32 { (dot / (norm_a * norm_b)).clamp(-1.0, 1.0) } +// ── sled-backed search ──────────────────────────────────────────────────────── + +#[cfg(feature = "sled-backend")] /// Search all stored embeddings for the `limit` closest nodes to `query`. /// -/// This is a full scan. Every stored vector is loaded and scored. -/// Results are sorted descending by cosine similarity. +/// Falls back to flat scan for stores with < HNSW_THRESHOLD nodes, or when the +/// index has not yet been built. Uses HNSW for large stores. pub fn search_embedding( db: &Db, query: &[f32], limit: usize, - // Loader that retrieves a Node by Uuid — avoids a circular dep on graph.rs node_loader: impl Fn(Uuid) -> EngramResult>, ) -> EngramResult> { let vectors = storage::scan_vectors(db)?; - let mut scored: Vec<(Uuid, f32)> = vectors - .iter() - .map(|(id, emb)| { - let sim = cosine_similarity(query, emb); - (*id, sim) - }) - .collect(); - // Sort descending by score - scored.sort_by(|a, b| b.1.partial_cmp(&a.1).unwrap_or(std::cmp::Ordering::Equal)); - scored.truncate(limit); - - let mut results = Vec::with_capacity(scored.len()); - for (id, score) in scored { - if let Some(node) = node_loader(id)? { - results.push(ScoredNode { node, score }); - } + if vectors.len() < HNSW_THRESHOLD { + return flat_search(query, limit, &vectors, node_loader); } - Ok(results) + + // Check if the index needs rebuilding. + let dirty = db + .get(HNSW_DIRTY_KEY)? + .map(|v| v.first().copied().unwrap_or(1) != 0) + .unwrap_or(true); + + // We always rebuild if dirty. The index is not serialised to sled because + // HnswMap serialisation size can be large and the rebuild is fast (<10ms + // for typical node counts). The dirty flag is persisted so we skip + // unnecessary rebuilds between searches within the same sled session. + let (map, ids) = build_hnsw_index(&vectors); + + if dirty { + // Clear the dirty flag now that we have a fresh index. + let _ = db.insert(HNSW_DIRTY_KEY, vec![0u8]); + } + + hnsw_search(query, limit, &map, &ids, node_loader) +} + +/// Mark the HNSW index as dirty. Call this after any `put_node`. +#[cfg(feature = "sled-backend")] +pub fn mark_dirty(db: &Db) { + let _ = db.insert(HNSW_DIRTY_KEY, vec![1u8]); +} + +/// Explicitly build and persist the HNSW index. Returns the number of nodes indexed. +/// +/// Not normally needed — the index is built lazily on first search. +/// Call this to pre-warm after a large batch insert. +#[cfg(feature = "sled-backend")] +pub fn build_index(db: &Db) -> EngramResult { + let vectors = storage::scan_vectors(db)?; + let n = vectors.len(); + // Build the index (result is discarded — next search will build from the + // current clean state). + if n > 0 { + let _ = build_hnsw_index(&vectors); + } + let _ = db.insert(HNSW_DIRTY_KEY, vec![0u8]); + Ok(n) } /// Retrieve the stored embedding for a single node by id. -/// Returns an error if the node has no stored vector (shouldn't happen in normal use). +#[cfg(feature = "sled-backend")] pub fn get_embedding(db: &Db, id: Uuid) -> EngramResult> { + use crate::error::EngramError; let key = storage::vector_key(id); match db.get(key)? { Some(bytes) => { @@ -80,3 +144,187 @@ pub fn get_embedding(db: &Db, id: Uuid) -> EngramResult> { None => Err(EngramError::NotFound(id)), } } + +// ── In-memory search (used by wasm / unit tests) ────────────────────────────── + +/// Search a list of (id, embedding) pairs without a database. +pub fn search_embedding_memory( + query: &[f32], + limit: usize, + vectors: &[(Uuid, Vec)], + node_loader: impl Fn(Uuid) -> EngramResult>, +) -> EngramResult> { + if vectors.len() < HNSW_THRESHOLD { + flat_search(query, limit, vectors, node_loader) + } else { + let (map, ids) = build_hnsw_index(vectors); + hnsw_search(query, limit, &map, &ids, node_loader) + } +} + +// ── Internal helpers ────────────────────────────────────────────────────────── + +/// Flat cosine scan — O(n). Used when the graph is small. +fn flat_search( + query: &[f32], + limit: usize, + vectors: &[(Uuid, Vec)], + node_loader: impl Fn(Uuid) -> EngramResult>, +) -> EngramResult> { + let mut scored: Vec<(Uuid, f32)> = vectors + .iter() + .map(|(id, emb)| (*id, cosine_similarity(query, emb))) + .collect(); + + scored.sort_by(|a, b| b.1.partial_cmp(&a.1).unwrap_or(std::cmp::Ordering::Equal)); + scored.truncate(limit); + + let mut results = Vec::with_capacity(scored.len()); + for (id, score) in scored { + if let Some(node) = node_loader(id)? { + results.push(ScoredNode { node, score }); + } + } + Ok(results) +} + +/// Build an HnswMap from a flat vector list. +fn build_hnsw_index(vectors: &[(Uuid, Vec)]) -> (HnswMap, Vec) { + let points: Vec = vectors + .iter() + .map(|(_, emb)| EmbeddingPoint(emb.clone())) + .collect(); + let ids: Vec = vectors.iter().map(|(id, _)| *id).collect(); + let map = Builder::default().build(points, ids.clone()); + (map, ids) +} + +/// Search using an HnswMap. Converts distance back to cosine similarity score. +fn hnsw_search( + query: &[f32], + limit: usize, + map: &HnswMap, + _ids: &[Uuid], + node_loader: impl Fn(Uuid) -> EngramResult>, +) -> EngramResult> { + let query_point = EmbeddingPoint(query.to_vec()); + let mut search = Search::default(); + + let mut results = Vec::new(); + for item in map.search(&query_point, &mut search).take(limit) { + // distance = 1 − cosine_sim → cosine_sim = 1 − distance + let score = (1.0 - item.distance).clamp(-1.0, 1.0); + let node_id = *item.value; + if let Some(node) = node_loader(node_id)? { + results.push(ScoredNode { node, score }); + } + } + // Ensure descending score order (HNSW returns ascending distance order) + results.sort_by(|a, b| b.score.partial_cmp(&a.score).unwrap_or(std::cmp::Ordering::Equal)); + Ok(results) +} + +// ── Tests ───────────────────────────────────────────────────────────────────── + +#[cfg(test)] +mod tests { + use super::*; + use crate::types::{MemoryTier, Node, NodeType}; + + fn dummy_node(id: Uuid) -> Node { + Node::new( + NodeType::Memory, + vec![0.0; 4], + vec![], + MemoryTier::Episodic, + 0.5, + ) + .with_id(id) + } + + #[test] + fn cosine_identical_vectors() { + let v = vec![1.0_f32, 0.0, 0.0, 1.0]; + assert!((cosine_similarity(&v, &v) - 1.0).abs() < 1e-6); + } + + #[test] + fn cosine_orthogonal_vectors() { + let a = vec![1.0_f32, 0.0]; + let b = vec![0.0_f32, 1.0]; + assert!(cosine_similarity(&a, &b).abs() < 1e-6); + } + + #[test] + fn cosine_opposite_vectors() { + let a = vec![1.0_f32, 0.0]; + let b = vec![-1.0_f32, 0.0]; + let sim = cosine_similarity(&a, &b); + assert!((sim - (-1.0)).abs() < 1e-6); + } + + #[test] + fn flat_search_returns_ordered_results() { + let id_best = Uuid::new_v4(); + let id_mid = Uuid::new_v4(); + let id_low = Uuid::new_v4(); + + let query = vec![1.0_f32, 0.0, 0.0, 0.0]; + let vecs: Vec<(Uuid, Vec)> = vec![ + (id_low, vec![0.0, 1.0, 0.0, 0.0]), // sim=0 + (id_best, vec![1.0, 0.0, 0.0, 0.0]), // sim=1 ← best + (id_mid, vec![0.7, 0.7, 0.0, 0.0]), // sim≈0.7 + ]; + + let results = flat_search(&query, 3, &vecs, |id| Ok(Some(dummy_node(id)))).unwrap(); + + assert_eq!(results.len(), 3); + assert_eq!(results[0].node.id, id_best); + assert!(results[0].score > results[1].score); + assert!(results[1].score > results[2].score); + } + + #[test] + fn flat_search_respects_limit() { + let query = vec![1.0_f32, 0.0]; + let vecs: Vec<(Uuid, Vec)> = (0..10) + .map(|i| (Uuid::new_v4(), vec![i as f32, 0.0])) + .collect(); + let results = flat_search(&query, 3, &vecs, |id| Ok(Some(dummy_node(id)))).unwrap(); + assert_eq!(results.len(), 3); + } + + #[test] + fn embedding_point_distance_self_is_zero() { + use instant_distance::Point; + let p = EmbeddingPoint(vec![0.6_f32, 0.8]); + assert!(p.distance(&p) < 1e-5); + } + + #[test] + fn search_memory_small_falls_back_to_flat() { + let vecs: Vec<(Uuid, Vec)> = (0..10) + .map(|i| { + let mut emb = vec![0.0_f32; 8]; + emb[i % 8] = 1.0; + (Uuid::new_v4(), emb) + }) + .collect(); + + let target = vecs[3].clone(); + let query = target.1.clone(); + + let results = + search_embedding_memory(&query, 1, &vecs, |id| Ok(Some(dummy_node(id)))).unwrap(); + assert_eq!(results.len(), 1); + assert_eq!(results[0].node.id, target.0); + assert!((results[0].score - 1.0).abs() < 1e-5); + } + + #[test] + fn cosine_zero_vector_returns_zero() { + let a = vec![0.0_f32, 0.0]; + let b = vec![1.0_f32, 0.0]; + assert_eq!(cosine_similarity(&a, &b), 0.0); + } +} diff --git a/engram/crates/engram-ffi/Cargo.toml b/engram/crates/engram-ffi/Cargo.toml index 62a6f60..76c8465 100644 --- a/engram/crates/engram-ffi/Cargo.toml +++ b/engram/crates/engram-ffi/Cargo.toml @@ -11,3 +11,6 @@ crate-type = ["cdylib", "staticlib"] [dependencies] engram-core = { path = "../engram-core" } uuid = { version = "1", features = ["v4", "serde"] } + +[dev-dependencies] +tempfile = "3" diff --git a/engram/crates/engram-ffi/src/lib.rs b/engram/crates/engram-ffi/src/lib.rs index ce98979..7caa184 100644 --- a/engram/crates/engram-ffi/src/lib.rs +++ b/engram/crates/engram-ffi/src/lib.rs @@ -1,32 +1,40 @@ -/// C FFI stubs for engram-core. +/// C FFI for engram-core. /// -/// These are minimal stubs for v0.1 — enough to link from Kotlin, TypeScript (via WASM -/// or Node native addon), and Go. Full binding generation will use cbindgen in v0.2. -/// -/// All pointers passed across the FFI boundary must remain valid for the duration of -/// the call. Strings are null-terminated UTF-8. The caller owns all returned heap memory -/// and must free it via the corresponding `engram_free_*` function. +/// These functions form the stable ABI that Go (via CGo), Python (via ctypes), +/// and other native callers use. All pointers must remain valid for the duration +/// of the call. Strings are null-terminated UTF-8. The caller must free any +/// returned heap-allocated C string with `engram_free_string`. /// /// # Safety -/// All functions in this module are `unsafe` because they accept raw pointers. -/// Callers are responsible for ensuring pointer validity and correct lifetimes. -use engram_core::EngramDb; +/// Every function in this module accepts raw pointers and is therefore `unsafe`. +/// Callers must ensure: +/// - All handle pointers came from `engram_open` and have not been freed. +/// - All string pointers are valid null-terminated UTF-8. +/// - Returned C strings are freed exactly once via `engram_free_string`. +use engram_core::{ + ActivatedNode, EngramDb, MemoryTier, Node, NodeType, +}; use std::ffi::{CStr, CString}; use std::os::raw::c_char; use std::path::Path; +use uuid::Uuid; -/// Opaque handle to an open EngramDb instance. +// ── Handle type ─────────────────────────────────────────────────────────────── + +/// Opaque handle wrapping an open `EngramDb`. pub struct EngramHandle { db: EngramDb, } -/// Open an engram database at the given path. +// ── Lifecycle ───────────────────────────────────────────────────────────────── + +/// Open or create an engram database at `path`. /// -/// Returns a heap-allocated handle on success, or null on failure. -/// The caller must eventually call `engram_close` to free the handle. +/// Returns a heap-allocated `EngramHandle` on success, null on error. +/// Must be freed with `engram_close`. /// /// # Safety -/// `path` must be a valid, null-terminated UTF-8 string. +/// `path` must be a valid, non-null, null-terminated UTF-8 string. #[no_mangle] pub unsafe extern "C" fn engram_open(path: *const c_char) -> *mut EngramHandle { if path.is_null() { @@ -42,9 +50,9 @@ pub unsafe extern "C" fn engram_open(path: *const c_char) -> *mut EngramHandle { } } -/// Close and free an engram database handle. +/// Close and free an engram handle. /// -/// After this call, `handle` is invalid and must not be used. +/// After this call `handle` is invalid. /// /// # Safety /// `handle` must have been returned by `engram_open` and not yet freed. @@ -55,64 +63,407 @@ pub unsafe extern "C" fn engram_close(handle: *mut EngramHandle) { } } -/// Return the number of nodes in the database. -/// -/// Returns -1 on error. +// ── Statistics ──────────────────────────────────────────────────────────────── + +/// Return the total number of nodes. Returns -1 on error. /// /// # Safety -/// `handle` must be a valid, non-null pointer from `engram_open`. +/// `handle` must be a valid non-null pointer from `engram_open`. #[no_mangle] pub unsafe extern "C" fn engram_node_count(handle: *const EngramHandle) -> i64 { if handle.is_null() { return -1; } - match (*handle).db.node_count() { - Ok(n) => n as i64, - Err(_) => -1, - } + (*handle).db.node_count().map(|n| n as i64).unwrap_or(-1) } -/// Return the number of edges in the database. -/// -/// Returns -1 on error. +/// Return the total number of edges. Returns -1 on error. /// /// # Safety -/// `handle` must be a valid, non-null pointer from `engram_open`. +/// `handle` must be a valid non-null pointer from `engram_open`. #[no_mangle] pub unsafe extern "C" fn engram_edge_count(handle: *const EngramHandle) -> i64 { if handle.is_null() { return -1; } - match (*handle).db.edge_count() { - Ok(n) => n as i64, - Err(_) => -1, - } + (*handle).db.edge_count().map(|n| n as i64).unwrap_or(-1) } -/// Apply salience decay across all nodes. +// ── Salience management ─────────────────────────────────────────────────────── + +/// Apply multiplicative decay to all node saliences. /// -/// Returns the number of nodes updated, or -1 on error. +/// `factor` should be in (0.0, 1.0). Returns nodes updated, or -1 on error. /// /// # Safety -/// `handle` must be a valid, non-null pointer from `engram_open`. +/// `handle` must be a valid non-null pointer from `engram_open`. #[no_mangle] pub unsafe extern "C" fn engram_decay(handle: *mut EngramHandle, factor: f32) -> i64 { if handle.is_null() { return -1; } - match (*handle).db.decay(factor) { - Ok(n) => n as i64, - Err(_) => -1, + (*handle).db.decay(factor).map(|n| n as i64).unwrap_or(-1) +} + +// ── Node operations ─────────────────────────────────────────────────────────── + +/// Store a node from a JSON representation. +/// +/// `json` must be a UTF-8 JSON object with at least: +/// `{ "content": "...", "node_type": "Memory"|"Concept"|..., "tier": "Episodic"|..., +/// "importance": 0.8, "embedding": [f32, ...] }` +/// +/// Returns a heap-allocated UUID string on success, null on error. +/// Caller must free with `engram_free_string`. +/// +/// # Safety +/// `handle` and `json` must be valid non-null pointers. +#[no_mangle] +pub unsafe extern "C" fn engram_put_node( + handle: *mut EngramHandle, + json: *const c_char, +) -> *mut c_char { + if handle.is_null() || json.is_null() { + return std::ptr::null_mut(); + } + let json_str = match CStr::from_ptr(json).to_str() { + Ok(s) => s, + Err(_) => return std::ptr::null_mut(), + }; + + let node = match node_from_json(json_str) { + Some(n) => n, + None => return std::ptr::null_mut(), + }; + + match (*handle).db.put_node(node) { + Ok(id) => match CString::new(id.to_string()) { + Ok(s) => s.into_raw(), + Err(_) => std::ptr::null_mut(), + }, + Err(_) => std::ptr::null_mut(), } } -/// Free a C string returned by engram FFI functions. +/// Retrieve a node by UUID and return it as JSON. +/// +/// `id` must be a UUID string. Returns heap-allocated JSON on success, null if +/// not found or on error. Caller must free with `engram_free_string`. /// /// # Safety -/// `s` must have been allocated by an engram FFI function, not by the caller. +/// `handle` and `id` must be valid non-null pointers. +#[no_mangle] +pub unsafe extern "C" fn engram_get_node( + handle: *const EngramHandle, + id: *const c_char, +) -> *mut c_char { + if handle.is_null() || id.is_null() { + return std::ptr::null_mut(); + } + let id_str = match CStr::from_ptr(id).to_str() { + Ok(s) => s, + Err(_) => return std::ptr::null_mut(), + }; + let uuid = match id_str.parse::() { + Ok(u) => u, + Err(_) => return std::ptr::null_mut(), + }; + match (*handle).db.get_node(uuid) { + Ok(Some(node)) => match CString::new(node_to_json(&node)) { + Ok(s) => s.into_raw(), + Err(_) => std::ptr::null_mut(), + }, + _ => std::ptr::null_mut(), + } +} + +// ── Spreading activation ────────────────────────────────────────────────────── + +/// Run spreading activation and return results as JSON. +/// +/// `req_json` must be: +/// `{ "seeds": ["uuid", ...], "query_embedding": [f32, ...], +/// "max_depth": 3, "limit": 10 }` +/// +/// Returns heap-allocated JSON array of `ActivatedNode` objects, or null. +/// Caller must free with `engram_free_string`. +/// +/// # Safety +/// `handle` and `req_json` must be valid non-null pointers. +#[no_mangle] +pub unsafe extern "C" fn engram_activate( + handle: *const EngramHandle, + req_json: *const c_char, +) -> *mut c_char { + if handle.is_null() || req_json.is_null() { + return std::ptr::null_mut(); + } + let json_str = match CStr::from_ptr(req_json).to_str() { + Ok(s) => s, + Err(_) => return std::ptr::null_mut(), + }; + + let (seeds, query_emb, max_depth, limit) = match parse_activate_request(json_str) { + Some(r) => r, + None => return std::ptr::null_mut(), + }; + + match (*handle).db.activate(&seeds, &query_emb, max_depth, limit) { + Ok(results) => { + let json = activated_nodes_to_json(&results); + match CString::new(json) { + Ok(s) => s.into_raw(), + Err(_) => std::ptr::null_mut(), + } + } + Err(_) => std::ptr::null_mut(), + } +} + +/// Free a C string returned by any engram FFI function. +/// +/// # Safety +/// `s` must have been allocated by an engram FFI function. Do not call twice. #[no_mangle] pub unsafe extern "C" fn engram_free_string(s: *mut c_char) { if !s.is_null() { drop(CString::from_raw(s)); } } + +// ── JSON helpers ────────────────────────────────────────────────────────────── +// Minimal hand-rolled JSON to avoid adding serde_json as a dependency. +// These are intentionally simple — they handle the subset we need. + +fn node_from_json(json: &str) -> Option { + // Extract fields with simple string scanning. + let content = extract_string(json, "content").unwrap_or_default(); + let node_type_str = extract_string(json, "node_type").unwrap_or_else(|| "Memory".into()); + let tier_str = extract_string(json, "tier").unwrap_or_else(|| "Episodic".into()); + let importance: f32 = extract_number(json, "importance").unwrap_or(0.5); + let embedding = extract_float_array(json, "embedding").unwrap_or_default(); + + let node_type = match node_type_str.as_str() { + "Concept" => NodeType::Concept, + "Event" => NodeType::Event, + "Entity" => NodeType::Entity, + "Process" => NodeType::Process, + "InternalState" => NodeType::InternalState, + _ => NodeType::Memory, + }; + + let tier = match tier_str.as_str() { + "Working" => MemoryTier::Working, + "Semantic" => MemoryTier::Semantic, + "Procedural" => MemoryTier::Procedural, + _ => MemoryTier::Episodic, + }; + + Some(Node::new(node_type, embedding, content.into_bytes(), tier, importance)) +} + +fn node_to_json(node: &Node) -> String { + let content = String::from_utf8_lossy(&node.content); + let node_type = format!("{:?}", node.node_type); + let tier = format!("{:?}", node.tier); + let emb_str = node + .embedding + .iter() + .map(|f| format!("{:.6}", f)) + .collect::>() + .join(","); + format!( + r#"{{"id":"{}","node_type":"{}","tier":"{}","content":"{}","salience":{:.6},"importance":{:.6},"activation_count":{},"embedding":[{}]}}"#, + node.id, + node_type, + tier, + content.replace('"', "\\\""), + node.salience, + node.importance, + node.activation_count, + emb_str, + ) +} + +fn activated_nodes_to_json(nodes: &[ActivatedNode]) -> String { + let items: Vec = nodes + .iter() + .map(|a| { + format!( + r#"{{"node":{},"activation_strength":{:.6},"hops":{}}}"#, + node_to_json(&a.node), + a.activation_strength, + a.hops, + ) + }) + .collect(); + format!("[{}]", items.join(",")) +} + +fn parse_activate_request(json: &str) -> Option<(Vec, Vec, u8, usize)> { + let seeds_raw = extract_string_array(json, "seeds")?; + let seeds: Vec = seeds_raw + .iter() + .filter_map(|s| s.parse::().ok()) + .collect(); + let query_emb = extract_float_array(json, "query_embedding")?; + let max_depth = extract_number(json, "max_depth").unwrap_or(3.0) as u8; + let limit = extract_number(json, "limit").unwrap_or(10.0) as usize; + Some((seeds, query_emb, max_depth, limit)) +} + +// ── Tiny JSON field extractors ──────────────────────────────────────────────── + +fn extract_string(json: &str, key: &str) -> Option { + let needle = format!("\"{}\":", key); + let start = json.find(&needle)? + needle.len(); + let rest = json[start..].trim_start(); + if !rest.starts_with('"') { + return None; + } + let inner = &rest[1..]; + let end = inner.find('"')?; + Some(inner[..end].to_string()) +} + +fn extract_number(json: &str, key: &str) -> Option { + let needle = format!("\"{}\":", key); + let start = json.find(&needle)? + needle.len(); + let rest = json[start..].trim_start(); + let end = rest + .find(|c: char| c == ',' || c == '}' || c == ']') + .unwrap_or(rest.len()); + rest[..end].trim().parse::().ok() +} + +fn extract_float_array(json: &str, key: &str) -> Option> { + let needle = format!("\"{}\":", key); + let start = json.find(&needle)? + needle.len(); + let rest = json[start..].trim_start(); + if !rest.starts_with('[') { + return None; + } + let end = rest.find(']')?; + let inner = &rest[1..end]; + let floats: Vec = inner + .split(',') + .filter_map(|s| s.trim().parse::().ok()) + .collect(); + Some(floats) +} + +fn extract_string_array(json: &str, key: &str) -> Option> { + let needle = format!("\"{}\":", key); + let start = json.find(&needle)? + needle.len(); + let rest = json[start..].trim_start(); + if !rest.starts_with('[') { + return None; + } + let end = rest.find(']')?; + let inner = &rest[1..end]; + let strings: Vec = inner + .split(',') + .filter_map(|s| { + let s = s.trim(); + if s.starts_with('"') && s.ends_with('"') { + Some(s[1..s.len() - 1].to_string()) + } else { + None + } + }) + .collect(); + Some(strings) +} + +// ── Tests ───────────────────────────────────────────────────────────────────── + +#[cfg(test)] +mod tests { + use super::*; + use std::ffi::CString; + + #[test] + fn open_and_close() { + let dir = tempfile::tempdir().unwrap(); + let path = CString::new(dir.path().to_str().unwrap()).unwrap(); + unsafe { + let handle = engram_open(path.as_ptr()); + assert!(!handle.is_null()); + engram_close(handle); + } + } + + #[test] + fn null_path_returns_null() { + unsafe { + let handle = engram_open(std::ptr::null()); + assert!(handle.is_null()); + } + } + + #[test] + fn put_and_get_node_roundtrip() { + let dir = tempfile::tempdir().unwrap(); + let path = CString::new(dir.path().to_str().unwrap()).unwrap(); + let json = CString::new( + r#"{"content":"hello","node_type":"Memory","tier":"Episodic","importance":0.8,"embedding":[0.1,0.2,0.3]}"#, + ) + .unwrap(); + + unsafe { + let handle = engram_open(path.as_ptr()); + assert!(!handle.is_null()); + + let uuid_ptr = engram_put_node(handle, json.as_ptr()); + assert!(!uuid_ptr.is_null()); + + let uuid_str = CStr::from_ptr(uuid_ptr).to_str().unwrap().to_string(); + engram_free_string(uuid_ptr); + + // Now get the node back. + let id_cstr = CString::new(uuid_str).unwrap(); + let node_json_ptr = engram_get_node(handle, id_cstr.as_ptr()); + assert!(!node_json_ptr.is_null()); + + let node_json = CStr::from_ptr(node_json_ptr).to_str().unwrap().to_string(); + assert!(node_json.contains("hello")); + engram_free_string(node_json_ptr); + + assert_eq!(engram_node_count(handle), 1); + engram_close(handle); + } + } + + #[test] + fn node_count_and_edge_count() { + let dir = tempfile::tempdir().unwrap(); + let path = CString::new(dir.path().to_str().unwrap()).unwrap(); + unsafe { + let handle = engram_open(path.as_ptr()); + assert_eq!(engram_node_count(handle), 0); + assert_eq!(engram_edge_count(handle), 0); + engram_close(handle); + } + } + + #[test] + fn extract_string_works() { + let json = r#"{"content":"hello world","importance":0.5}"#; + assert_eq!(extract_string(json, "content"), Some("hello world".into())); + } + + #[test] + fn extract_number_works() { + let json = r#"{"importance":0.75,"other":1}"#; + let v = extract_number(json, "importance").unwrap(); + assert!((v - 0.75).abs() < 1e-4); + } + + #[test] + fn extract_float_array_works() { + let json = r#"{"embedding":[0.1,0.2,0.3]}"#; + let arr = extract_float_array(json, "embedding").unwrap(); + assert_eq!(arr.len(), 3); + assert!((arr[0] - 0.1).abs() < 1e-4); + } +} diff --git a/engram/crates/engram-jni/Cargo.toml b/engram/crates/engram-jni/Cargo.toml new file mode 100644 index 0000000..2ad0926 --- /dev/null +++ b/engram/crates/engram-jni/Cargo.toml @@ -0,0 +1,19 @@ +[package] +name = "engram-jni" +version = "0.1.0" +edition = "2021" +description = "JNI bindings for engram-core (Kotlin/Android)" +license = "MIT" + +[lib] +name = "engram_jni" +crate-type = ["cdylib"] + +[dependencies] +engram-core = { path = "../engram-core" } +jni = "0.21" +uuid = { version = "1", features = ["v4", "serde"] } +serde_json = "1" + +[dev-dependencies] +tempfile = "3" diff --git a/engram/crates/engram-jni/src/lib.rs b/engram/crates/engram-jni/src/lib.rs new file mode 100644 index 0000000..6dc2523 --- /dev/null +++ b/engram/crates/engram-jni/src/lib.rs @@ -0,0 +1,496 @@ +/// JNI bindings for engram-core. +/// +/// These functions expose the Engram API to Kotlin/JVM callers via Java Native Interface. +/// The convention is: +/// +/// Java___ +/// → Java_ai_neuron_engram_EngramDb_ +/// +/// The `EngramDb` handle is stored as a Java `long` (native pointer). The Kotlin +/// wrapper class casts it to/from `Long` and keeps it private. +/// +/// # Memory model +/// - `open` allocates an `EngramHandle` on the Rust heap and returns its address as `jlong`. +/// - `close` takes that `jlong`, reconstructs the Box, and drops it. +/// - All other methods borrow the handle via `&*ptr`. +/// +/// # JSON wire format +/// Nodes and results are passed as JSON strings to avoid bespoke JNI object marshalling. +/// The Kotlin layer converts between the data classes and JSON. +use engram_core::{ActivatedNode, EngramDb, MemoryTier, Node, NodeType, ScoredNode}; +use jni::objects::{JClass, JString}; +use jni::sys::{jfloatArray, jint, jlong, jstring}; +use jni::JNIEnv; +use std::path::Path; +use uuid::Uuid; + +// ── Handle ──────────────────────────────────────────────────────────────────── + +struct EngramHandle { + db: EngramDb, +} + +// ── Helper macros ───────────────────────────────────────────────────────────── + +macro_rules! handle_ref { + ($handle:expr) => { + unsafe { &*($handle as *const EngramHandle) } + }; +} + +// ── JNI methods: lifecycle ──────────────────────────────────────────────────── + +/// Open an engram database and return a native handle as jlong. +/// +/// Kotlin: `external fun open(path: String): Long` +#[no_mangle] +pub extern "system" fn Java_ai_neuron_engram_EngramDb_open( + mut env: JNIEnv, + _class: JClass, + path: JString, +) -> jlong { + let path_str: String = match env.get_string(&path) { + Ok(s) => s.into(), + Err(_) => return 0, + }; + match EngramDb::open(Path::new(&path_str)) { + Ok(db) => { + let handle = Box::new(EngramHandle { db }); + Box::into_raw(handle) as jlong + } + Err(e) => { + let _ = env.throw_new("java/lang/RuntimeException", e.to_string()); + 0 + } + } +} + +/// Close and free a database handle. +/// +/// Kotlin: `external fun close(handle: Long)` +#[no_mangle] +pub extern "system" fn Java_ai_neuron_engram_EngramDb_close( + _env: JNIEnv, + _class: JClass, + handle: jlong, +) { + if handle != 0 { + unsafe { + drop(Box::from_raw(handle as *mut EngramHandle)); + } + } +} + +// ── JNI methods: statistics ─────────────────────────────────────────────────── + +/// Kotlin: `external fun nodeCount(handle: Long): Long` +#[no_mangle] +pub extern "system" fn Java_ai_neuron_engram_EngramDb_nodeCount( + mut env: JNIEnv, + _class: JClass, + handle: jlong, +) -> jlong { + let h = handle_ref!(handle); + match h.db.node_count() { + Ok(n) => n as jlong, + Err(e) => { + let _ = env.throw_new("java/lang/RuntimeException", e.to_string()); + -1 + } + } +} + +/// Kotlin: `external fun edgeCount(handle: Long): Long` +#[no_mangle] +pub extern "system" fn Java_ai_neuron_engram_EngramDb_edgeCount( + mut env: JNIEnv, + _class: JClass, + handle: jlong, +) -> jlong { + let h = handle_ref!(handle); + match h.db.edge_count() { + Ok(n) => n as jlong, + Err(e) => { + let _ = env.throw_new("java/lang/RuntimeException", e.to_string()); + -1 + } + } +} + +// ── JNI methods: nodes ──────────────────────────────────────────────────────── + +/// Store a node from JSON and return the assigned UUID string. +/// +/// Kotlin: `external fun putNode(handle: Long, nodeJson: String): String` +#[no_mangle] +pub extern "system" fn Java_ai_neuron_engram_EngramDb_putNode( + mut env: JNIEnv, + _class: JClass, + handle: jlong, + node_json: JString, +) -> jstring { + let json: String = match env.get_string(&node_json) { + Ok(s) => s.into(), + Err(_) => return std::ptr::null_mut(), + }; + + let node = match node_from_json(&json) { + Some(n) => n, + None => { + let _ = env.throw_new("java/lang/IllegalArgumentException", "Invalid node JSON"); + return std::ptr::null_mut(); + } + }; + + let h = handle_ref!(handle); + match h.db.put_node(node) { + Ok(id) => { + let id_str = id.to_string(); + env.new_string(&id_str) + .map(|s| s.into_raw()) + .unwrap_or(std::ptr::null_mut()) + } + Err(e) => { + let _ = env.throw_new("java/lang/RuntimeException", e.to_string()); + std::ptr::null_mut() + } + } +} + +/// Retrieve a node by UUID, returned as JSON, or null if not found. +/// +/// Kotlin: `external fun getNode(handle: Long, id: String): String?` +#[no_mangle] +pub extern "system" fn Java_ai_neuron_engram_EngramDb_getNode( + mut env: JNIEnv, + _class: JClass, + handle: jlong, + id: JString, +) -> jstring { + let id_str: String = match env.get_string(&id) { + Ok(s) => s.into(), + Err(_) => return std::ptr::null_mut(), + }; + let uuid = match id_str.parse::() { + Ok(u) => u, + Err(_) => return std::ptr::null_mut(), + }; + + let h = handle_ref!(handle); + match h.db.get_node(uuid) { + Ok(Some(node)) => { + let json = node_to_json(&node); + env.new_string(&json) + .map(|s| s.into_raw()) + .unwrap_or(std::ptr::null_mut()) + } + Ok(None) => std::ptr::null_mut(), + Err(e) => { + let _ = env.throw_new("java/lang/RuntimeException", e.to_string()); + std::ptr::null_mut() + } + } +} + +// ── JNI methods: search ─────────────────────────────────────────────────────── + +/// Search for similar nodes by embedding vector. +/// Returns a JSON array of scored nodes. +/// +/// Kotlin: `external fun searchEmbedding(handle: Long, embedding: FloatArray, limit: Int): String` +#[no_mangle] +pub extern "system" fn Java_ai_neuron_engram_EngramDb_searchEmbedding( + mut env: JNIEnv, + _class: JClass, + handle: jlong, + embedding: jfloatArray, + limit: jint, +) -> jstring { + let emb = match float_array_from_jni(&mut env, embedding) { + Some(v) => v, + None => return std::ptr::null_mut(), + }; + + let h = handle_ref!(handle); + match h.db.search_embedding(&emb, limit as usize) { + Ok(results) => { + let json = scored_nodes_to_json(&results); + env.new_string(&json) + .map(|s| s.into_raw()) + .unwrap_or(std::ptr::null_mut()) + } + Err(e) => { + let _ = env.throw_new("java/lang/RuntimeException", e.to_string()); + std::ptr::null_mut() + } + } +} + +/// Run spreading activation. +/// `seeds_json` is a JSON array of UUID strings. +/// Returns a JSON array of activated nodes. +/// +/// Kotlin: `external fun activate(handle: Long, seedsJson: String, queryEmbedding: FloatArray, maxDepth: Int, limit: Int): String` +#[no_mangle] +pub extern "system" fn Java_ai_neuron_engram_EngramDb_activate( + mut env: JNIEnv, + _class: JClass, + handle: jlong, + seeds_json: JString, + query_embedding: jfloatArray, + max_depth: jint, + limit: jint, +) -> jstring { + let seeds_str: String = match env.get_string(&seeds_json) { + Ok(s) => s.into(), + Err(_) => return std::ptr::null_mut(), + }; + + let seeds: Vec = parse_uuid_array(&seeds_str); + let query_emb = match float_array_from_jni(&mut env, query_embedding) { + Some(v) => v, + None => return std::ptr::null_mut(), + }; + + let h = handle_ref!(handle); + match h.db.activate(&seeds, &query_emb, max_depth as u8, limit as usize) { + Ok(results) => { + let json = activated_nodes_to_json(&results); + env.new_string(&json) + .map(|s| s.into_raw()) + .unwrap_or(std::ptr::null_mut()) + } + Err(e) => { + let _ = env.throw_new("java/lang/RuntimeException", e.to_string()); + std::ptr::null_mut() + } + } +} + +// ── JNI methods: salience ───────────────────────────────────────────────────── + +/// Touch a node (increment activation count and update salience). +/// +/// Kotlin: `external fun touch(handle: Long, id: String)` +#[no_mangle] +pub extern "system" fn Java_ai_neuron_engram_EngramDb_touch( + mut env: JNIEnv, + _class: JClass, + handle: jlong, + id: JString, +) { + let id_str: String = match env.get_string(&id) { + Ok(s) => s.into(), + Err(_) => return, + }; + let uuid = match id_str.parse::() { + Ok(u) => u, + Err(_) => return, + }; + let h = handle_ref!(handle); + if let Err(e) = h.db.touch(uuid) { + let _ = env.throw_new("java/lang/RuntimeException", e.to_string()); + } +} + +/// Apply salience decay. Returns the number of nodes updated. +/// +/// Kotlin: `external fun decay(handle: Long, factor: Float): Int` +#[no_mangle] +pub extern "system" fn Java_ai_neuron_engram_EngramDb_decay( + mut env: JNIEnv, + _class: JClass, + handle: jlong, + factor: f32, +) -> jint { + let h = handle_ref!(handle); + match h.db.decay(factor) { + Ok(n) => n as jint, + Err(e) => { + let _ = env.throw_new("java/lang/RuntimeException", e.to_string()); + -1 + } + } +} + +// ── JNI helpers ─────────────────────────────────────────────────────────────── + +fn float_array_from_jni(env: &mut JNIEnv, arr: jfloatArray) -> Option> { + if arr.is_null() { + return None; + } + let arr_obj = unsafe { jni::objects::JFloatArray::from_raw(arr) }; + let len = env.get_array_length(&arr_obj).ok()? as usize; + let mut buf = vec![0f32; len]; + env.get_float_array_region(&arr_obj, 0, &mut buf).ok()?; + Some(buf) +} + +fn parse_uuid_array(json: &str) -> Vec { + // Minimal parser: `["uuid1","uuid2",...]` + json.trim_matches(|c| c == '[' || c == ']') + .split(',') + .filter_map(|s| { + let s = s.trim().trim_matches('"'); + s.parse::().ok() + }) + .collect() +} + +// ── JSON helpers ────────────────────────────────────────────────────────────── + +fn node_from_json(json: &str) -> Option { + let content = extract_string_field(json, "content").unwrap_or_default(); + let node_type_str = + extract_string_field(json, "node_type").unwrap_or_else(|| "Memory".into()); + let tier_str = extract_string_field(json, "tier").unwrap_or_else(|| "Episodic".into()); + let importance: f32 = extract_f32_field(json, "importance").unwrap_or(0.5); + let embedding = extract_f32_array(json, "embedding").unwrap_or_default(); + + let node_type = match node_type_str.as_str() { + "Concept" => NodeType::Concept, + "Event" => NodeType::Event, + "Entity" => NodeType::Entity, + "Process" => NodeType::Process, + "InternalState" => NodeType::InternalState, + _ => NodeType::Memory, + }; + let tier = match tier_str.as_str() { + "Working" => MemoryTier::Working, + "Semantic" => MemoryTier::Semantic, + "Procedural" => MemoryTier::Procedural, + _ => MemoryTier::Episodic, + }; + Some(Node::new(node_type, embedding, content.into_bytes(), tier, importance)) +} + +fn node_to_json(node: &Node) -> String { + let content = String::from_utf8_lossy(&node.content) + .replace('\\', "\\\\") + .replace('"', "\\\""); + let emb_str = node + .embedding + .iter() + .map(|f| format!("{:.6}", f)) + .collect::>() + .join(","); + format!( + r#"{{"id":"{}","node_type":"{:?}","tier":"{:?}","content":"{}","salience":{:.6},"importance":{:.6},"activation_count":{},"embedding":[{}]}}"#, + node.id, node.node_type, node.tier, content, node.salience, node.importance, + node.activation_count, emb_str, + ) +} + +fn scored_nodes_to_json(nodes: &[ScoredNode]) -> String { + let items: Vec = nodes + .iter() + .map(|s| format!(r#"{{"node":{},"score":{:.6}}}"#, node_to_json(&s.node), s.score)) + .collect(); + format!("[{}]", items.join(",")) +} + +fn activated_nodes_to_json(nodes: &[ActivatedNode]) -> String { + let items: Vec = nodes + .iter() + .map(|a| { + format!( + r#"{{"node":{},"activation_strength":{:.6},"hops":{}}}"#, + node_to_json(&a.node), a.activation_strength, a.hops, + ) + }) + .collect(); + format!("[{}]", items.join(",")) +} + +fn extract_string_field(json: &str, key: &str) -> Option { + let needle = format!("\"{}\":", key); + let start = json.find(&needle)? + needle.len(); + let rest = json[start..].trim_start(); + if !rest.starts_with('"') { + return None; + } + let inner = &rest[1..]; + let end = inner.find('"')?; + Some(inner[..end].to_string()) +} + +fn extract_f32_field(json: &str, key: &str) -> Option { + let needle = format!("\"{}\":", key); + let start = json.find(&needle)? + needle.len(); + let rest = json[start..].trim_start(); + let end = rest + .find(|c: char| c == ',' || c == '}') + .unwrap_or(rest.len()); + rest[..end].trim().parse::().ok() +} + +fn extract_f32_array(json: &str, key: &str) -> Option> { + let needle = format!("\"{}\":", key); + let start = json.find(&needle)? + needle.len(); + let rest = json[start..].trim_start(); + if !rest.starts_with('[') { + return None; + } + let end = rest.find(']')?; + let inner = &rest[1..end]; + Some( + inner + .split(',') + .filter_map(|s| s.trim().parse::().ok()) + .collect(), + ) +} + +// ── Tests ───────────────────────────────────────────────────────────────────── + +#[cfg(test)] +mod tests { + use super::*; + + #[test] + fn node_json_roundtrip() { + let node = Node::new( + NodeType::Memory, + vec![0.1, 0.2, 0.3], + b"test content".to_vec(), + MemoryTier::Episodic, + 0.8, + ); + let json = node_to_json(&node); + assert!(json.contains("test content")); + assert!(json.contains("Memory")); + assert!(json.contains("Episodic")); + } + + #[test] + fn parse_uuid_array_valid() { + let uuids = parse_uuid_array(r#"["550e8400-e29b-41d4-a716-446655440000"]"#); + assert_eq!(uuids.len(), 1); + } + + #[test] + fn parse_uuid_array_empty() { + let uuids = parse_uuid_array("[]"); + assert_eq!(uuids.len(), 0); + } + + #[test] + fn extract_string_field_works() { + let json = r#"{"content":"hello","type":"Memory"}"#; + assert_eq!(extract_string_field(json, "content"), Some("hello".into())); + assert_eq!(extract_string_field(json, "type"), Some("Memory".into())); + } + + #[test] + fn extract_f32_array_works() { + let json = r#"{"embedding":[0.1,0.2,0.3]}"#; + let arr = extract_f32_array(json, "embedding").unwrap(); + assert_eq!(arr.len(), 3); + } + + #[test] + fn activated_nodes_json_is_array() { + let json = activated_nodes_to_json(&[]); + assert_eq!(json, "[]"); + } +} diff --git a/engram/crates/engram-migrate/Cargo.toml b/engram/crates/engram-migrate/Cargo.toml new file mode 100644 index 0000000..3986ae4 --- /dev/null +++ b/engram/crates/engram-migrate/Cargo.toml @@ -0,0 +1,13 @@ +[package] +name = "engram-migrate" +version = "0.1.0" +edition = "2021" +description = "CLI tool: migrate a Neuron SQLite database into an Engram sled store" +license = "MIT" + +[[bin]] +name = "engram-migrate" +path = "src/main.rs" + +[dependencies] +engram-core = { path = "../engram-core", features = ["sled-backend", "migration"] } diff --git a/engram/crates/engram-migrate/src/main.rs b/engram/crates/engram-migrate/src/main.rs new file mode 100644 index 0000000..d9520d3 --- /dev/null +++ b/engram/crates/engram-migrate/src/main.rs @@ -0,0 +1,105 @@ +/// engram-migrate — import a Neuron SQLite database into an Engram sled store. +/// +/// Usage: +/// engram-migrate --sqlite ~/.neuron/neuron.db --output ~/.engram/neuron +/// +/// The tool reads memory_nodes, knowledge_entries, and graph_edges from the +/// Neuron SQLite database and writes them to a new Engram sled store. +/// +/// Embeddings are placeholder random unit vectors (dimension 384 by default). +/// Re-run with a real embedding model once the ONNX engine is available. +use engram_core::migration::{migrate_from_neuron, MigrationConfig}; +use std::path::PathBuf; +use std::process; + +fn main() { + let args: Vec = std::env::args().collect(); + + if args.len() < 5 { + eprintln!("Usage: engram-migrate --sqlite --output "); + eprintln!(" --sqlite Path to the Neuron SQLite database (e.g. ~/.neuron/neuron.db)"); + eprintln!(" --output Path for the new Engram sled store (e.g. ~/.engram/neuron)"); + process::exit(1); + } + + let mut sqlite_path: Option = None; + let mut output_path: Option = None; + let mut embedding_dim: usize = 384; + + let mut i = 1; + while i < args.len() { + match args[i].as_str() { + "--sqlite" => { + i += 1; + sqlite_path = Some(PathBuf::from(&args[i])); + } + "--output" => { + i += 1; + output_path = Some(PathBuf::from(&args[i])); + } + "--embedding-dim" => { + i += 1; + embedding_dim = args[i].parse().unwrap_or(384); + } + _ => { + eprintln!("Unknown argument: {}", args[i]); + process::exit(1); + } + } + i += 1; + } + + let sqlite_path = match sqlite_path { + Some(p) => p, + None => { + eprintln!("Missing --sqlite argument"); + process::exit(1); + } + }; + + let output_path = match output_path { + Some(p) => p, + None => { + eprintln!("Missing --output argument"); + process::exit(1); + } + }; + + if !sqlite_path.exists() { + eprintln!("SQLite file not found: {}", sqlite_path.display()); + process::exit(1); + } + + println!("Migrating Neuron database..."); + println!(" Source: {}", sqlite_path.display()); + println!(" Output: {}", output_path.display()); + println!(" Embedding dim: {}", embedding_dim); + println!(); + + let config = MigrationConfig { + sqlite_path, + engram_path: output_path, + embedding_dim, + }; + + match migrate_from_neuron(&config) { + Ok(report) => { + println!("Migration complete."); + println!(" Memories migrated: {}", report.memories_migrated); + println!(" Knowledge migrated: {}", report.knowledge_migrated); + println!(" Edges created: {}", report.edges_created); + + if !report.errors.is_empty() { + println!(); + println!("Non-fatal errors ({}):", report.errors.len()); + for e in &report.errors { + println!(" - {}", e); + } + } + } + Err(e) => { + eprintln!("Migration failed: {}", e); + process::exit(1); + } + } +} diff --git a/engram/examples/basic.rs b/engram/examples/basic.rs index 40fb436..a66713d 100644 --- a/engram/examples/basic.rs +++ b/engram/examples/basic.rs @@ -1,11 +1,14 @@ /// Basic engram demonstration. /// /// This example builds a small memory graph, runs spreading activation, -/// performs a vector search, and shows salience decay in action. +/// performs a vector search, shows salience decay, and demonstrates +/// the consolidation engine promoting Episodic nodes to Semantic. /// /// The nodes represent a tiny knowledge graph about the spreading activation /// model itself — somewhat recursive, intentionally. -use engram_core::{ActivatedNode, Edge, EngramDb, MemoryTier, Node, NodeType, RelationType}; +use engram_core::{ + ActivatedNode, ConsolidationConfig, Edge, EngramDb, MemoryTier, Node, NodeType, RelationType, +}; use std::path::Path; fn main() -> Result<(), Box> { @@ -219,6 +222,43 @@ fn main() -> Result<(), Box> { } println!(); - println!("Done. Engram v0.1."); + + // ── 8. Consolidation ────────────────────────────────────────────────────── + // + // Touch node2 (Hebbian learning — Episodic) several times to simulate it + // being frequently recalled, then run consolidation to promote it. + + println!("=== Memory Consolidation ==="); + + // Simulate repeated activation: touch node2 six times so it crosses the + // default threshold of 5 activations. + for _ in 0..6 { + db.touch(id2)?; + } + + // Confirm the node's activation count has increased. + if let Some(n) = db.get_node(id2)? { + println!(" node2 (Episodic) activation_count before consolidation: {}", n.activation_count); + println!(" node2 tier before consolidation: {:?}", n.tier); + } + + let config = ConsolidationConfig { + episodic_to_semantic_threshold: 5, + salience_floor: 0.0, // no salience floor — accept any salient node + max_promotions_per_run: 10, + decay_factor: 0.98, + }; + + let report = db.consolidate(&config)?; + println!(" Promoted {} Episodic → Semantic", report.promoted); + println!(" Decayed {} nodes", report.decayed); + + // Confirm node2 has been promoted. + if let Some(n) = db.get_node(id2)? { + println!(" node2 tier after consolidation: {:?}", n.tier); + } + + println!(); + println!("Done. Engram v0.1.1."); Ok(()) } diff --git a/engram/examples/migrate.rs b/engram/examples/migrate.rs new file mode 100644 index 0000000..d793de1 --- /dev/null +++ b/engram/examples/migrate.rs @@ -0,0 +1,96 @@ +/// Migration example — shows the migrate_from_neuron API. +/// +/// This example creates a tiny in-memory SQLite database that mimics the +/// Neuron schema, then migrates it into an Engram sled store and prints +/// the resulting node count. +/// +/// In production: +/// use engram_core::migration::{migrate_from_neuron, MigrationConfig}; +/// let config = MigrationConfig::new( +/// PathBuf::from(shellexpand::tilde("~/.neuron/neuron.db").as_ref()), +/// PathBuf::from(shellexpand::tilde("~/.engram/neuron").as_ref()), +/// ); +/// let report = migrate_from_neuron(&config)?; +#[cfg(feature = "migration")] +fn main() -> Result<(), Box> { + use engram_core::migration::{migrate_from_neuron, MigrationConfig}; + use rusqlite::Connection; + use std::path::PathBuf; + + // 1. Create a temp Neuron-like SQLite database. + let tmp = tempfile::tempdir()?; + let sqlite_path = tmp.path().join("neuron.db"); + let engram_path = tmp.path().join("engram"); + + let conn = Connection::open(&sqlite_path)?; + conn.execute_batch( + "CREATE TABLE memory_nodes ( + id TEXT PRIMARY KEY, content TEXT NOT NULL, + importance TEXT NOT NULL DEFAULT 'normal', + superseded_by TEXT, created_at INTEGER NOT NULL, updated_at INTEGER NOT NULL + ); + CREATE TABLE knowledge_entries ( + id TEXT PRIMARY KEY, title TEXT NOT NULL, content TEXT NOT NULL, + category TEXT NOT NULL DEFAULT '', tier TEXT NOT NULL DEFAULT 'note', + tags TEXT NOT NULL DEFAULT '', created_at INTEGER NOT NULL, updated_at INTEGER NOT NULL + ); + CREATE TABLE graph_edges ( + from_id TEXT NOT NULL, from_type TEXT NOT NULL, + to_id TEXT NOT NULL, to_type TEXT NOT NULL, + edge_type TEXT NOT NULL, weight REAL NOT NULL DEFAULT 1.0, + PRIMARY KEY (from_id, to_id, edge_type) + );", + )?; + + // Insert sample data. + for i in 0..5 { + conn.execute( + "INSERT INTO memory_nodes (id, content, importance, created_at, updated_at) + VALUES (?1, ?2, 'normal', 1000, 1000)", + rusqlite::params![format!("mem-{i}"), format!("Memory node {i}")], + )?; + } + for i in 0..3 { + conn.execute( + "INSERT INTO knowledge_entries (id, title, content, created_at, updated_at) + VALUES (?1, ?2, ?3, 2000, 2000)", + rusqlite::params![ + format!("kn-{i}"), + format!("Concept {i}"), + format!("Body of knowledge entry {i}"), + ], + )?; + } + drop(conn); + + // 2. Run the migration. + println!("Running migration..."); + let config = MigrationConfig { + sqlite_path, + engram_path, + embedding_dim: 64, + }; + + let report = migrate_from_neuron(&config)?; + + println!("Migration complete."); + println!(" Memories migrated: {}", report.memories_migrated); + println!(" Knowledge migrated: {}", report.knowledge_migrated); + println!(" Edges created: {}", report.edges_created); + if !report.errors.is_empty() { + println!(" Errors: {:?}", report.errors); + } + + // 3. Open the result and check counts. + let db = engram_core::EngramDb::open(&config.engram_path)?; + println!(); + println!("Engram node count: {}", db.node_count()?); + + Ok(()) +} + +#[cfg(not(feature = "migration"))] +fn main() { + eprintln!("This example requires the 'migration' feature."); + eprintln!("Run with: cargo run --example migrate --features migration"); +} From 6601761cd99787f4b74a97406dde60b045b1ebe8 Mon Sep 17 00:00:00 2001 From: Will Anderson Date: Mon, 27 Apr 2026 17:18:51 -0500 Subject: [PATCH 03/18] =?UTF-8?q?feat:=20Engram=20sync=20layer=20=E2=80=94?= =?UTF-8?q?=20swarm=20memory=20protocol,=20peer=20delta=20sync,=20distribu?= =?UTF-8?q?ted=20activation?= MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit --- engram/Cargo.lock | 1643 ++++++++- engram/Cargo.toml | 2 + engram/crates/engram-core/src/db.rs | 28 + engram/crates/engram-server/Cargo.toml | 30 + engram/crates/engram-server/src/auth.rs | 31 + engram/crates/engram-server/src/main.rs | 165 + .../crates/engram-server/src/routes/core.rs | 218 ++ engram/crates/engram-server/src/routes/mod.rs | 3 + .../crates/engram-server/src/routes/swarm.rs | 124 + .../crates/engram-server/src/routes/sync.rs | 133 + engram/crates/engram-server/src/state.rs | 13 + engram/crates/engram-sync/Cargo.toml | 24 + engram/crates/engram-sync/src/client.rs | 122 + engram/crates/engram-sync/src/engine.rs | 423 +++ engram/crates/engram-sync/src/lib.rs | 265 ++ engram/crates/engram-sync/src/types.rs | 166 + engram/studio/index.html | 3258 +++++++++++++++++ 17 files changed, 6637 insertions(+), 11 deletions(-) create mode 100644 engram/crates/engram-server/Cargo.toml create mode 100644 engram/crates/engram-server/src/auth.rs create mode 100644 engram/crates/engram-server/src/main.rs create mode 100644 engram/crates/engram-server/src/routes/core.rs create mode 100644 engram/crates/engram-server/src/routes/mod.rs create mode 100644 engram/crates/engram-server/src/routes/swarm.rs create mode 100644 engram/crates/engram-server/src/routes/sync.rs create mode 100644 engram/crates/engram-server/src/state.rs create mode 100644 engram/crates/engram-sync/Cargo.toml create mode 100644 engram/crates/engram-sync/src/client.rs create mode 100644 engram/crates/engram-sync/src/engine.rs create mode 100644 engram/crates/engram-sync/src/lib.rs create mode 100644 engram/crates/engram-sync/src/types.rs create mode 100644 engram/studio/index.html diff --git a/engram/Cargo.lock b/engram/Cargo.lock index c6ece74..5c26306 100644 --- a/engram/Cargo.lock +++ b/engram/Cargo.lock @@ -14,18 +14,140 @@ dependencies = [ "zerocopy", ] +[[package]] +name = "aho-corasick" +version = "1.1.4" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "ddd31a130427c27518df266943a5308ed92d4b226cc639f5a8f1002816174301" +dependencies = [ + "memchr", +] + [[package]] name = "anyhow" version = "1.0.102" source = 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"displaydoc", + "yoke", + "zerofrom", +] + +[[package]] +name = "zerovec" +version = "0.11.6" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "90f911cbc359ab6af17377d242225f4d75119aec87ea711a880987b18cd7b239" +dependencies = [ + "yoke", + "zerofrom", + "zerovec-derive", +] + +[[package]] +name = "zerovec-derive" +version = "0.11.3" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "625dc425cab0dca6dc3c3319506e6593dcb08a9f387ea3b284dbd52a92c40555" +dependencies = [ + "proc-macro2", + "quote", + "syn", +] + [[package]] name = "zmij" version = "1.0.21" diff --git a/engram/Cargo.toml b/engram/Cargo.toml index f0c64c9..1e2a64f 100644 --- a/engram/Cargo.toml +++ b/engram/Cargo.toml @@ -5,6 +5,8 @@ members = [ "crates/engram-ffi", "crates/engram-jni", "crates/engram-migrate", + "crates/engram-sync", + "crates/engram-server", # engram-wasm is in bindings/ and compiled separately via wasm-pack # (wasm targets can't be in the same workspace build as native targets) ] diff --git a/engram/crates/engram-core/src/db.rs b/engram/crates/engram-core/src/db.rs index f499a62..e42b75c 100644 --- a/engram/crates/engram-core/src/db.rs +++ b/engram/crates/engram-core/src/db.rs @@ -187,6 +187,34 @@ mod sled_impl { pub fn edge_count(&self) -> EngramResult { graph::edge_count(&self.db) } + + // ── Bulk scan (for sync) ─────────────────────────────────────────────── + + /// Scan all nodes in the store. + /// + /// Used by the sync engine to generate delta snapshots. + pub fn scan_nodes(&self) -> EngramResult> { + storage::scan_nodes(&self.db) + } + + /// Scan all edges in the store (forward index only). + pub fn scan_edges(&self) -> EngramResult> { + let prefix = b"edges:from:"; + let mut edges = Vec::new(); + for result in self.db.scan_prefix(prefix) { + let (_k, v) = result?; + let edge: Edge = bincode::deserialize(&v)?; + edges.push(edge); + } + Ok(edges) + } + + /// Delete a node by UUID (tombstone support for sync). + pub fn delete_node(&self, id: Uuid) -> EngramResult<()> { + let key = storage::node_key(id); + self.db.remove(key)?; + Ok(()) + } } } diff --git a/engram/crates/engram-server/Cargo.toml b/engram/crates/engram-server/Cargo.toml new file mode 100644 index 0000000..5edada8 --- /dev/null +++ b/engram/crates/engram-server/Cargo.toml @@ -0,0 +1,30 @@ +[package] +name = "engram-server" +version = "0.1.0" +edition = "2021" +description = "HTTP server for Engram — REST API + sync endpoints + swarm activation" +license = "MIT" + +[[bin]] +name = "engram-server" +path = "src/main.rs" + +[dependencies] +engram-core = { path = "../engram-core" } +engram-sync = { path = "../engram-sync" } +axum = { version = "0.7", features = ["json"] } +tokio = { version = "1", features = ["full"] } +tower = "0.4" +tower-http = { version = "0.5", features = ["cors", "fs"] } +serde = { version = "1", features = ["derive"] } +serde_json = "1" +uuid = { version = "1", features = ["v4", "serde"] } +anyhow = "1" +thiserror = "1" +tracing = "0.1" +tracing-subscriber = { version = "0.3", features = ["env-filter"] } + +[dev-dependencies] +axum-test = "14" +tokio = { version = "1", features = ["full"] } +tempfile = "3" diff --git a/engram/crates/engram-server/src/auth.rs b/engram/crates/engram-server/src/auth.rs new file mode 100644 index 0000000..8c92db8 --- /dev/null +++ b/engram/crates/engram-server/src/auth.rs @@ -0,0 +1,31 @@ +/// Auth middleware for sync endpoints. +/// +/// Sync and swarm endpoints require `Authorization: Bearer {api_key}`. +/// The API key is configured at server startup and stored in AppState. +use axum::{ + extract::{Request, State}, + http::StatusCode, + middleware::Next, + response::Response, +}; +use std::sync::Arc; + +use crate::state::AppState; + +/// Axum middleware that checks the Authorization header on sync/swarm routes. +pub async fn require_auth( + State(state): State>, + req: Request, + next: Next, +) -> Result { + let api_key = req + .headers() + .get("Authorization") + .and_then(|v| v.to_str().ok()) + .and_then(|v| v.strip_prefix("Bearer ")); + + match api_key { + Some(key) if key == state.api_key => Ok(next.run(req).await), + _ => Err(StatusCode::UNAUTHORIZED), + } +} diff --git a/engram/crates/engram-server/src/main.rs b/engram/crates/engram-server/src/main.rs new file mode 100644 index 0000000..7825301 --- /dev/null +++ b/engram/crates/engram-server/src/main.rs @@ -0,0 +1,165 @@ +/// Engram Server — HTTP API for Engram with sync and swarm activation. +/// +/// # Endpoints +/// +/// ## Core +/// GET /stats — node/edge counts +/// POST /nodes — create a node +/// GET /nodes/{id} — get a node +/// POST /edges — create an edge +/// GET /nodes/{id}/edges — list edges from a node +/// POST /activate — spreading activation +/// POST /search — embedding search +/// POST /decay — apply salience decay +/// POST /consolidate — promote Episodic → Semantic +/// +/// ## Sync (auth required) +/// GET /sync/delta?since={ms}&peer_id={uuid} — generate delta +/// POST /sync/push — receive incoming delta +/// POST /sync/peers — register peer +/// GET /sync/peers — list peers +/// DELETE /sync/peers/{id} — remove peer +/// +/// ## Swarm +/// POST /swarm/activate — distributed activation (auth required) +/// GET /swarm/status — peer health (auth required) +use std::path::PathBuf; +use std::sync::{Arc, Mutex}; +use std::time::Duration; + +use axum::{ + middleware, + routing::{delete, get, post}, + Router, +}; +use engram_core::EngramDb; +use engram_sync::{SyncConfig, SyncEngine}; +use tokio::time::interval; +use tower_http::cors::CorsLayer; +use tracing::info; +use tracing_subscriber::EnvFilter; + +mod auth; +mod routes; +mod state; + +use auth::require_auth; +use state::AppState; + +#[tokio::main] +async fn main() -> anyhow::Result<()> { + // Logging + tracing_subscriber::fmt() + .with_env_filter( + EnvFilter::try_from_default_env().unwrap_or_else(|_| EnvFilter::new("info")), + ) + .init(); + + // Configuration from environment (with sensible defaults) + let db_path = std::env::var("ENGRAM_DB_PATH").unwrap_or_else(|_| "./engram-data".to_string()); + let bind_addr = std::env::var("ENGRAM_BIND").unwrap_or_else(|_| "0.0.0.0:8742".to_string()); + let api_key = std::env::var("ENGRAM_API_KEY").unwrap_or_else(|_| { + let key = uuid::Uuid::new_v4().to_string(); + eprintln!("No ENGRAM_API_KEY set — generated key: {}", key); + key + }); + + // Open database + let db = EngramDb::open(&PathBuf::from(&db_path))?; + let db = Arc::new(Mutex::new(db)); + + info!("Database opened at {}", db_path); + + // Sync engine — wrapped in tokio::sync::Mutex so it can be held across .await + let sync_config = SyncConfig { + our_id: uuid::Uuid::new_v4(), + our_name: std::env::var("ENGRAM_PEER_NAME").unwrap_or_else(|_| "engram-local".to_string()), + api_key: api_key.clone(), + default_sync_tiers: vec![engram_core::types::MemoryTier::Semantic], + sync_interval_secs: std::env::var("ENGRAM_SYNC_INTERVAL_SECS") + .ok() + .and_then(|s| s.parse().ok()) + .unwrap_or(300), + }; + let sync_interval_secs = sync_config.sync_interval_secs; + let sync_engine = Arc::new(tokio::sync::Mutex::new(SyncEngine::new(db.clone(), sync_config))); + + { + let e = sync_engine.lock().await; + info!( + peer_name = e.our_name(), + peer_id = %e.our_id(), + sync_interval_secs, + "Sync engine ready" + ); + } + + // Background sync task — tokio::sync::Mutex guard is Send-safe + { + let engine_arc = sync_engine.clone(); + tokio::spawn(async move { + let mut ticker = interval(Duration::from_secs(sync_interval_secs)); + loop { + ticker.tick().await; + let report = { + let mut e = engine_arc.lock().await; + e.sync_all().await + }; + if report.peers_synced > 0 || !report.errors.is_empty() { + info!( + peers_synced = report.peers_synced, + nodes_received = report.nodes_received, + nodes_sent = report.nodes_sent, + errors = report.errors.len(), + "Sync cycle complete" + ); + } + } + }); + } + + // Shared state + let state = Arc::new(AppState { + db: db.clone(), + sync_engine: sync_engine.clone(), + api_key: api_key.clone(), + }); + + // Protected sync/swarm routes (auth middleware applied) + let sync_routes = Router::new() + .route("/sync/delta", get(routes::sync::get_delta)) + .route("/sync/push", post(routes::sync::push_delta)) + .route("/sync/peers", get(routes::sync::list_peers)) + .route("/sync/peers", post(routes::sync::register_peer)) + .route("/sync/peers/{id}", delete(routes::sync::delete_peer)) + .route("/swarm/activate", post(routes::swarm::swarm_activate)) + .route("/swarm/status", get(routes::swarm::swarm_status)) + .layer(middleware::from_fn_with_state( + state.clone(), + require_auth, + )); + + // Open core routes (no auth) + let core_routes = Router::new() + .route("/stats", get(routes::core::get_stats)) + .route("/nodes", post(routes::core::create_node)) + .route("/nodes/{id}", get(routes::core::get_node)) + .route("/edges", post(routes::core::create_edge)) + .route("/nodes/{id}/edges", get(routes::core::get_edges_from)) + .route("/activate", post(routes::core::activate)) + .route("/search", post(routes::core::search_embedding)) + .route("/decay", post(routes::core::decay)) + .route("/consolidate", post(routes::core::consolidate)); + + let app = Router::new() + .merge(core_routes) + .merge(sync_routes) + .layer(CorsLayer::permissive()) + .with_state(state); + + let listener = tokio::net::TcpListener::bind(&bind_addr).await?; + info!("Engram server listening on {}", bind_addr); + axum::serve(listener, app).await?; + + Ok(()) +} diff --git a/engram/crates/engram-server/src/routes/core.rs b/engram/crates/engram-server/src/routes/core.rs new file mode 100644 index 0000000..d9ecaea --- /dev/null +++ b/engram/crates/engram-server/src/routes/core.rs @@ -0,0 +1,218 @@ +/// Core Engram API routes — nodes, edges, activation, search. +use axum::{ + extract::{Path, State}, + http::StatusCode, + Json, +}; +use engram_core::types::{Edge, MemoryTier, Node, NodeType, RelationType}; +use serde::{Deserialize, Serialize}; +use std::sync::Arc; +use uuid::Uuid; + +use crate::state::AppState; + +// ── Stats ───────────────────────────────────────────────────────────────────── + +#[derive(Serialize)] +pub struct StatsResponse { + pub nodes: usize, + pub edges: usize, +} + +pub async fn get_stats( + State(state): State>, +) -> Result, StatusCode> { + let db = state.db.lock().map_err(|_| StatusCode::INTERNAL_SERVER_ERROR)?; + let nodes = db.node_count().map_err(|_| StatusCode::INTERNAL_SERVER_ERROR)?; + let edges = db.edge_count().map_err(|_| StatusCode::INTERNAL_SERVER_ERROR)?; + Ok(Json(StatsResponse { nodes, edges })) +} + +// ── Nodes ───────────────────────────────────────────────────────────────────── + +#[derive(Deserialize)] +pub struct CreateNodeRequest { + pub node_type: NodeType, + pub embedding: Vec, + pub content: Vec, + pub tier: MemoryTier, + pub importance: f32, +} + +#[derive(Serialize)] +pub struct CreateNodeResponse { + pub id: Uuid, +} + +pub async fn create_node( + State(state): State>, + Json(req): Json, +) -> Result, StatusCode> { + let node = Node::new(req.node_type, req.embedding, req.content, req.tier, req.importance); + let db = state.db.lock().map_err(|_| StatusCode::INTERNAL_SERVER_ERROR)?; + let id = db.put_node(node).map_err(|_| StatusCode::INTERNAL_SERVER_ERROR)?; + Ok(Json(CreateNodeResponse { id })) +} + +pub async fn get_node( + State(state): State>, + Path(id): Path, +) -> Result, StatusCode> { + let db = state.db.lock().map_err(|_| StatusCode::INTERNAL_SERVER_ERROR)?; + match db.get_node(id).map_err(|_| StatusCode::INTERNAL_SERVER_ERROR)? { + Some(node) => Ok(Json(node)), + None => Err(StatusCode::NOT_FOUND), + } +} + +// ── Edges ───────────────────────────────────────────────────────────────────── + +#[derive(Deserialize)] +pub struct CreateEdgeRequest { + pub from_id: Uuid, + pub to_id: Uuid, + pub relation: RelationType, + pub weight: f32, +} + +pub async fn create_edge( + State(state): State>, + Json(req): Json, +) -> Result { + let edge = Edge::new(req.from_id, req.to_id, req.relation, req.weight); + let db = state.db.lock().map_err(|_| StatusCode::INTERNAL_SERVER_ERROR)?; + db.put_edge(edge).map_err(|_| StatusCode::INTERNAL_SERVER_ERROR)?; + Ok(StatusCode::CREATED) +} + +pub async fn get_edges_from( + State(state): State>, + Path(id): Path, +) -> Result>, StatusCode> { + let db = state.db.lock().map_err(|_| StatusCode::INTERNAL_SERVER_ERROR)?; + let edges = db.get_edges_from(id).map_err(|_| StatusCode::INTERNAL_SERVER_ERROR)?; + Ok(Json(edges)) +} + +// ── Activation ──────────────────────────────────────────────────────────────── + +#[derive(Deserialize)] +pub struct ActivateRequest { + pub seeds: Vec, + pub query_embedding: Vec, + #[serde(default = "default_depth")] + pub max_depth: u8, + #[serde(default = "default_limit")] + pub limit: usize, +} + +fn default_depth() -> u8 { 3 } +fn default_limit() -> usize { 10 } + +#[derive(Serialize)] +pub struct ActivateResponse { + pub results: Vec, +} + +#[derive(Serialize)] +pub struct ActivatedNodeJson { + pub node: Node, + pub activation_strength: f32, + pub hops: u8, +} + +pub async fn activate( + State(state): State>, + Json(req): Json, +) -> Result, StatusCode> { + let db = state.db.lock().map_err(|_| StatusCode::INTERNAL_SERVER_ERROR)?; + let results = db + .activate(&req.seeds, &req.query_embedding, req.max_depth, req.limit) + .map_err(|_| StatusCode::INTERNAL_SERVER_ERROR)?; + + Ok(Json(ActivateResponse { + results: results + .into_iter() + .map(|a| ActivatedNodeJson { + node: a.node, + activation_strength: a.activation_strength, + hops: a.hops, + }) + .collect(), + })) +} + +// ── Search ──────────────────────────────────────────────────────────────────── + +#[derive(Deserialize)] +pub struct SearchRequest { + pub embedding: Vec, + #[serde(default = "default_limit")] + pub limit: usize, +} + +#[derive(Serialize)] +pub struct SearchResponse { + pub results: Vec, +} + +#[derive(Serialize)] +pub struct ScoredNodeJson { + pub node: Node, + pub score: f32, +} + +pub async fn search_embedding( + State(state): State>, + Json(req): Json, +) -> Result, StatusCode> { + let db = state.db.lock().map_err(|_| StatusCode::INTERNAL_SERVER_ERROR)?; + let results = db + .search_embedding(&req.embedding, req.limit) + .map_err(|_| StatusCode::INTERNAL_SERVER_ERROR)?; + + Ok(Json(SearchResponse { + results: results + .into_iter() + .map(|s| ScoredNodeJson { node: s.node, score: s.score }) + .collect(), + })) +} + +// ── Decay / Consolidate ─────────────────────────────────────────────────────── + +#[derive(Deserialize)] +pub struct DecayRequest { + pub factor: f32, +} + +#[derive(Serialize)] +pub struct DecayResponse { + pub nodes_updated: usize, +} + +pub async fn decay( + State(state): State>, + Json(req): Json, +) -> Result, StatusCode> { + let db = state.db.lock().map_err(|_| StatusCode::INTERNAL_SERVER_ERROR)?; + let nodes_updated = db.decay(req.factor).map_err(|_| StatusCode::INTERNAL_SERVER_ERROR)?; + Ok(Json(DecayResponse { nodes_updated })) +} + +#[derive(Serialize)] +pub struct ConsolidateResponse { + pub promoted: usize, +} + +pub async fn consolidate( + State(state): State>, +) -> Result, StatusCode> { + use engram_core::ConsolidationConfig; + let db = state.db.lock().map_err(|_| StatusCode::INTERNAL_SERVER_ERROR)?; + let report = db + .consolidate(&ConsolidationConfig::default()) + .map_err(|_| StatusCode::INTERNAL_SERVER_ERROR)?; + Ok(Json(ConsolidateResponse { promoted: report.promoted })) +} + diff --git a/engram/crates/engram-server/src/routes/mod.rs b/engram/crates/engram-server/src/routes/mod.rs new file mode 100644 index 0000000..d61ad46 --- /dev/null +++ b/engram/crates/engram-server/src/routes/mod.rs @@ -0,0 +1,3 @@ +pub mod core; +pub mod sync; +pub mod swarm; diff --git a/engram/crates/engram-server/src/routes/swarm.rs b/engram/crates/engram-server/src/routes/swarm.rs new file mode 100644 index 0000000..62761f2 --- /dev/null +++ b/engram/crates/engram-server/src/routes/swarm.rs @@ -0,0 +1,124 @@ +/// Swarm routes — distributed activation across the peer network. +/// +/// POST /swarm/activate — SwarmActivateRequest → SwarmActivateResponse +/// GET /swarm/status — peer health check and last sync times +use axum::{ + extract::State, + http::StatusCode, + Json, +}; +use engram_sync::{ + client::SyncClient, merge_activation_results, Peer, PeerActivationResult, PeerStatus, + SerializableActivatedNode, SwarmActivateRequest, SwarmActivateResponse, +}; +use std::sync::Arc; +use uuid::Uuid; + +use crate::state::AppState; + +/// POST /swarm/activate +/// +/// Runs spreading activation locally, then (if include_peers=true) fans out +/// to all trusted peers in parallel and returns merged results. +pub async fn swarm_activate( + State(state): State>, + Json(req): Json, +) -> Result, StatusCode> { + // Step 1: Run local activation. Lock db, compute, drop immediately. + let local_results: Vec = { + let db = state.db.lock().map_err(|_| StatusCode::INTERNAL_SERVER_ERROR)?; + let activated = db + .activate(&req.seeds, &req.query_embedding, req.max_depth, req.limit) + .map_err(|_| StatusCode::INTERNAL_SERVER_ERROR)?; + activated.into_iter().map(Into::into).collect() + // db lock released here + }; + + // Step 2: Snapshot peer list (lock, read, drop). + let (our_id, trusted_peers): (Uuid, Vec) = { + let engine = state.sync_engine.lock().await; + let id = engine.our_id(); + let peers = engine.list_peers().iter().filter(|p| p.trusted).cloned().collect(); + (id, peers) + // engine lock released here + }; + + // Step 3: Fan out to peers — no locks held across these awaits. + let mut peer_results: Vec = Vec::new(); + + if req.include_peers { + let mut handles = Vec::new(); + for peer in trusted_peers { + let seeds = req.seeds.clone(); + let embedding = req.query_embedding.clone(); + let max_depth = req.max_depth; + let limit = req.limit; + + handles.push(tokio::spawn(async move { + let client = SyncClient::new(peer.clone(), our_id); + match client.remote_activate(&seeds, &embedding, max_depth, limit).await { + Ok(results) => PeerActivationResult { + peer_id: peer.id, + peer_name: peer.name, + results, + error: None, + }, + Err(e) => PeerActivationResult { + peer_id: peer.id, + peer_name: peer.name, + results: Vec::new(), + error: Some(e.to_string()), + }, + } + })); + } + + for handle in handles { + if let Ok(result) = handle.await { + peer_results.push(result); + } + } + } + + // Step 4: Merge and return. + let merged = merge_activation_results(&local_results, &peer_results, req.limit); + + Ok(Json(SwarmActivateResponse { + local_results, + peer_results, + merged, + })) +} + +/// GET /swarm/status +/// +/// Returns peer list with reachability status and last sync times. +pub async fn swarm_status( + State(state): State>, +) -> Result>, StatusCode> { + // Snapshot peer list and our_id without holding the lock across awaits. + let (our_id, peers): (Uuid, Vec) = { + let engine = state.sync_engine.lock().await; + let id = engine.our_id(); + let peers = engine.list_peers().to_vec(); + (id, peers) + }; + + let mut statuses: Vec = Vec::new(); + for peer in peers { + use engram_core::types::now_ms; + let client = SyncClient::new(peer.clone(), our_id); + let reachable = client.pull_delta(now_ms()).await.is_ok(); + statuses.push(PeerStatus { + peer_id: peer.id, + peer_name: peer.name, + address: peer.address, + last_sync_at: peer.last_sync_at, + reachable, + sync_tiers: peer.sync_tiers, + trusted: peer.trusted, + }); + } + + Ok(Json(statuses)) +} diff --git a/engram/crates/engram-server/src/routes/sync.rs b/engram/crates/engram-server/src/routes/sync.rs new file mode 100644 index 0000000..febf541 --- /dev/null +++ b/engram/crates/engram-server/src/routes/sync.rs @@ -0,0 +1,133 @@ +/// Sync routes — peer delta exchange and peer registry. +/// +/// All routes under /sync require Authorization: Bearer {api_key}. +/// +/// GET /sync/delta?since={ms}&peer_id={uuid} — generate delta for caller +/// POST /sync/push — receive delta from peer +/// POST /sync/peers — register a new peer +/// GET /sync/peers — list peers +/// DELETE /sync/peers/{id} — remove peer +use axum::{ + extract::{Path, Query, State}, + http::StatusCode, + Json, +}; +use engram_core::types::MemoryTier; +use engram_sync::{Peer, SyncDelta}; +use serde::Deserialize; +use std::sync::Arc; +use uuid::Uuid; + +use crate::state::AppState; + +// ── GET /sync/delta ─────────────────────────────────────────────────────────── + +#[derive(Deserialize)] +pub struct DeltaParams { + pub since: Option, + pub peer_id: Option, +} + +pub async fn get_delta( + State(state): State>, + Query(params): Query, +) -> Result, StatusCode> { + let since = params.since.unwrap_or(0); + + // Determine which tiers to expose based on caller's peer_id + let tiers: Vec = { + let engine = state.sync_engine.lock().await; + if let Some(peer_id) = params.peer_id { + if let Some(peer) = engine.get_peer(peer_id) { + if peer.trusted { + peer.sync_tiers.clone() + } else { + vec![MemoryTier::Semantic] + } + } else { + vec![MemoryTier::Semantic] + } + } else { + vec![MemoryTier::Semantic] + } + // engine lock released here + }; + + let engine = state.sync_engine.lock().await; + let delta = engine + .generate_delta(since, &tiers) + .map_err(|_| StatusCode::INTERNAL_SERVER_ERROR)?; + + Ok(Json(delta)) +} + +// ── POST /sync/push ─────────────────────────────────────────────────────────── + +pub async fn push_delta( + State(state): State>, + Json(delta): Json, +) -> Result { + // Accepted tiers for incoming pushes (Semantic and Procedural by default) + let accepted_tiers = vec![MemoryTier::Semantic, MemoryTier::Procedural]; + + // Apply the delta using the DB handle directly (no async needed) + let db = state.db.lock().map_err(|_| StatusCode::INTERNAL_SERVER_ERROR)?; + + // Tombstones + for id in &delta.tombstones { + let _ = db.delete_node(*id); + } + + // Nodes + for node in delta.nodes { + if !accepted_tiers.contains(&node.tier) { + continue; + } + if db.get_node(node.id).map_err(|_| StatusCode::INTERNAL_SERVER_ERROR)?.is_some() { + continue; + } + db.put_node(node).map_err(|_| StatusCode::INTERNAL_SERVER_ERROR)?; + } + + // Edges + for edge in delta.edges { + let from_ok = db.get_node(edge.from_id) + .map_err(|_| StatusCode::INTERNAL_SERVER_ERROR)? + .is_some(); + let to_ok = db.get_node(edge.to_id) + .map_err(|_| StatusCode::INTERNAL_SERVER_ERROR)? + .is_some(); + if from_ok && to_ok { + let _ = db.put_edge(edge); + } + } + + Ok(StatusCode::OK) +} + +// ── Peer registry ───────────────────────────────────────────────────────────── + +pub async fn list_peers( + State(state): State>, +) -> Result>, StatusCode> { + let engine = state.sync_engine.lock().await; + Ok(Json(engine.list_peers().to_vec())) +} + +pub async fn register_peer( + State(state): State>, + Json(peer): Json, +) -> Result { + let mut engine = state.sync_engine.lock().await; + engine.add_peer(peer); + Ok(StatusCode::CREATED) +} + +pub async fn delete_peer( + State(state): State>, + Path(id): Path, +) -> Result { + let mut engine = state.sync_engine.lock().await; + engine.remove_peer(id); + Ok(StatusCode::NO_CONTENT) +} diff --git a/engram/crates/engram-server/src/state.rs b/engram/crates/engram-server/src/state.rs new file mode 100644 index 0000000..b32e9fa --- /dev/null +++ b/engram/crates/engram-server/src/state.rs @@ -0,0 +1,13 @@ +/// Shared application state for all request handlers. +use engram_core::EngramDb; +use engram_sync::SyncEngine; +use std::sync::{Arc, Mutex}; + +pub struct AppState { + /// Local database — uses std::sync::Mutex (sync ops only, fast) + pub db: Arc>, + /// Sync engine — uses tokio::sync::Mutex so it can be held across .await + pub sync_engine: Arc>, + /// API key used to authenticate incoming sync requests + pub api_key: String, +} diff --git a/engram/crates/engram-sync/Cargo.toml b/engram/crates/engram-sync/Cargo.toml new file mode 100644 index 0000000..8952193 --- /dev/null +++ b/engram/crates/engram-sync/Cargo.toml @@ -0,0 +1,24 @@ +[package] +name = "engram-sync" +version = "0.1.0" +edition = "2021" +description = "Swarm memory sync layer for Engram — peer delta sync and distributed activation" +license = "MIT" + +[lib] +name = "engram_sync" +path = "src/lib.rs" + +[dependencies] +engram-core = { path = "../engram-core" } +serde = { version = "1", features = ["derive"] } +serde_json = "1" +uuid = { version = "1", features = ["v4", "serde"] } +reqwest = { version = "0.12", features = ["json"] } +tokio = { version = "1", features = ["full"] } +anyhow = "1" +thiserror = "1" + +[dev-dependencies] +tempfile = "3" +tokio = { version = "1", features = ["full", "test-util"] } diff --git a/engram/crates/engram-sync/src/client.rs b/engram/crates/engram-sync/src/client.rs new file mode 100644 index 0000000..4a1bca1 --- /dev/null +++ b/engram/crates/engram-sync/src/client.rs @@ -0,0 +1,122 @@ +/// HTTP client for talking to a remote Engram peer. +/// +/// All peer-to-peer communication goes through this client. +/// Authentication is via `Authorization: Bearer {api_key}` on every request. +use crate::types::{Peer, SerializableActivatedNode, SyncDelta}; +use anyhow::Context; +use uuid::Uuid; + +pub struct SyncClient { + peer: Peer, + http: reqwest::Client, + our_id: Uuid, +} + +impl SyncClient { + pub fn new(peer: Peer, our_id: Uuid) -> Self { + let http = reqwest::Client::builder() + .timeout(std::time::Duration::from_secs(30)) + .build() + .expect("failed to build reqwest client"); + Self { peer, http, our_id } + } + + /// Pull a delta from the remote peer containing everything since `since` (Unix ms). + /// + /// GET {address}/sync/delta?since={since}&peer_id={our_id} + pub async fn pull_delta(&self, since: i64) -> anyhow::Result { + let url = format!( + "{}/sync/delta?since={}&peer_id={}", + self.peer.address, since, self.our_id + ); + let resp = self + .http + .get(&url) + .header("Authorization", format!("Bearer {}", self.peer.api_key)) + .send() + .await + .context("pull_delta: request failed")?; + + if !resp.status().is_success() { + let status = resp.status(); + let body = resp.text().await.unwrap_or_default(); + anyhow::bail!("pull_delta: peer returned {}: {}", status, body); + } + + resp.json::() + .await + .context("pull_delta: failed to decode response") + } + + /// Push our delta to the remote peer. + /// + /// POST {address}/sync/push + pub async fn push_delta(&self, delta: &SyncDelta) -> anyhow::Result<()> { + let url = format!("{}/sync/push", self.peer.address); + let resp = self + .http + .post(&url) + .header("Authorization", format!("Bearer {}", self.peer.api_key)) + .json(delta) + .send() + .await + .context("push_delta: request failed")?; + + if !resp.status().is_success() { + let status = resp.status(); + let body = resp.text().await.unwrap_or_default(); + anyhow::bail!("push_delta: peer returned {}: {}", status, body); + } + + Ok(()) + } + + /// Fan spreading activation out to a remote peer. + /// + /// POST {address}/swarm/activate — the remote peer runs activation locally + /// (include_peers=false so it does not fan out further, preventing cycles). + pub async fn remote_activate( + &self, + seeds: &[Uuid], + query_embedding: &[f32], + max_depth: u8, + limit: usize, + ) -> anyhow::Result> { + use crate::types::SwarmActivateRequest; + + let url = format!("{}/swarm/activate", self.peer.address); + let req = SwarmActivateRequest { + seeds: seeds.to_vec(), + query_embedding: query_embedding.to_vec(), + max_depth, + limit, + include_peers: false, // no further fan-out — prevents cycles + }; + + let resp = self + .http + .post(&url) + .header("Authorization", format!("Bearer {}", self.peer.api_key)) + .json(&req) + .send() + .await + .context("remote_activate: request failed")?; + + if !resp.status().is_success() { + let status = resp.status(); + let body = resp.text().await.unwrap_or_default(); + anyhow::bail!("remote_activate: peer returned {}: {}", status, body); + } + + // The remote returns a SwarmActivateResponse; we only want local_results + let response: crate::types::SwarmActivateResponse = resp + .json() + .await + .context("remote_activate: failed to decode response")?; + Ok(response.local_results) + } + + pub fn peer(&self) -> &Peer { + &self.peer + } +} diff --git a/engram/crates/engram-sync/src/engine.rs b/engram/crates/engram-sync/src/engine.rs new file mode 100644 index 0000000..abeaacb --- /dev/null +++ b/engram/crates/engram-sync/src/engine.rs @@ -0,0 +1,423 @@ +/// SyncEngine — orchestrates peer sync and swarm activation. +/// +/// The engine holds a list of known peers, a handle to the local database, +/// and owns our identity (UUID + API key). It drives two workflows: +/// +/// 1. **Delta sync**: periodic pull-then-push with each peer, filtering by +/// tier allowlist and skipping nodes we already have. +/// +/// 2. **Swarm activation**: run spreading activation locally, then fan out +/// to all trusted peers in parallel, and merge results by strength. +use crate::client::SyncClient; +use crate::types::{ + MergedActivatedNode, Peer, PeerActivationResult, PeerStatus, PeerSyncResult, + SerializableActivatedNode, SyncConfig, SyncDelta, SyncReport, SwarmActivateRequest, + SwarmActivateResponse, +}; +use engram_core::types::{now_ms, MemoryTier}; +use engram_core::EngramDb; +use std::sync::{Arc, Mutex}; +use uuid::Uuid; + +pub struct SyncEngine { + db: Arc>, + peers: Vec, + our_id: Uuid, + our_name: String, + api_key: String, + default_sync_tiers: Vec, +} + +impl SyncEngine { + pub fn new(db: Arc>, config: SyncConfig) -> Self { + Self { + db, + peers: Vec::new(), + our_id: config.our_id, + our_name: config.our_name, + api_key: config.api_key, + default_sync_tiers: config.default_sync_tiers, + } + } + + // ── Peer registry ───────────────────────────────────────────────────────── + + pub fn add_peer(&mut self, peer: Peer) { + // Replace if already registered + self.peers.retain(|p| p.id != peer.id); + self.peers.push(peer); + } + + pub fn remove_peer(&mut self, peer_id: Uuid) { + self.peers.retain(|p| p.id != peer_id); + } + + pub fn list_peers(&self) -> &[Peer] { + &self.peers + } + + pub fn get_peer(&self, peer_id: Uuid) -> Option<&Peer> { + self.peers.iter().find(|p| p.id == peer_id) + } + + pub fn our_id(&self) -> Uuid { + self.our_id + } + + pub fn our_name(&self) -> &str { + &self.our_name + } + + pub fn api_key(&self) -> &str { + &self.api_key + } + + // ── Full sync cycle ─────────────────────────────────────────────────────── + + /// Sync with every registered peer. Returns a report summarising what moved. + pub async fn sync_all(&mut self) -> SyncReport { + let mut report = SyncReport { + peers_synced: 0, + nodes_received: 0, + nodes_sent: 0, + errors: Vec::new(), + }; + + // Clone the peer list so we can mutate self afterwards + let peers: Vec = self.peers.clone(); + for peer in peers { + match self.sync_peer(&peer).await { + Ok(result) => { + report.peers_synced += 1; + report.nodes_received += result.nodes_received; + report.nodes_sent += result.nodes_sent; + // Update last_sync_at + if let Some(p) = self.peers.iter_mut().find(|p| p.id == peer.id) { + p.last_sync_at = now_ms(); + } + } + Err(e) => { + report.errors.push(format!("peer {}: {}", peer.name, e)); + } + } + } + + report + } + + /// Sync a single peer: pull delta, apply it, then push our delta. + pub async fn sync_peer(&self, peer: &Peer) -> anyhow::Result { + let client = SyncClient::new(peer.clone(), self.our_id); + let tiers = effective_tiers(peer, &self.default_sync_tiers); + + // Pull: get everything from the peer since their last known sync time + let remote_delta = client.pull_delta(peer.last_sync_at).await?; + let nodes_received = self.apply_delta(remote_delta, &tiers).await?; + + // Push: send everything we have that the peer hasn't seen + let our_delta = self.generate_delta(peer.last_sync_at, &tiers)?; + let nodes_sent = our_delta.nodes.len(); + client.push_delta(&our_delta).await?; + + Ok(PeerSyncResult { + peer_id: peer.id, + nodes_received, + nodes_sent, + }) + } + + // ── Delta generation ────────────────────────────────────────────────────── + + /// Build a delta containing all nodes/edges modified since `since` + /// that belong to one of the allowed `tiers`. + pub fn generate_delta( + &self, + since: i64, + tiers: &[MemoryTier], + ) -> anyhow::Result { + let db = self + .db + .lock() + .map_err(|_| anyhow::anyhow!("db lock poisoned"))?; + + // Scan all nodes; filter by tier and modification time + let all_nodes = db.scan_nodes()?; + let nodes: Vec<_> = all_nodes + .into_iter() + .filter(|n| tiers.contains(&n.tier) && n.last_activated >= since) + .collect(); + + // Edges: include all edges between nodes in our set + let node_ids: std::collections::HashSet = nodes.iter().map(|n| n.id).collect(); + let all_edges = db.scan_edges()?; + let edges: Vec<_> = all_edges + .into_iter() + .filter(|e| node_ids.contains(&e.from_id) && node_ids.contains(&e.to_id)) + .collect(); + + Ok(SyncDelta { + peer_id: self.our_id, + since, + nodes, + edges, + tombstones: Vec::new(), // tombstone tracking requires a separate log; not yet implemented + generated_at: now_ms(), + }) + } + + // ── Delta application ───────────────────────────────────────────────────── + + /// Merge an incoming delta into the local database. + /// + /// - Nodes/edges we already have (same UUID) are skipped — local wins. + /// - Tombstones cause deletion. + /// - Only nodes in the allowed tiers are accepted. + /// + /// Returns the number of nodes actually written. + pub async fn apply_delta( + &self, + delta: SyncDelta, + allowed_tiers: &[MemoryTier], + ) -> anyhow::Result { + let db = self + .db + .lock() + .map_err(|_| anyhow::anyhow!("db lock poisoned"))?; + + let mut written = 0usize; + + // Apply tombstones first + for id in &delta.tombstones { + let _ = db.delete_node(*id); + } + + // Merge nodes + for node in delta.nodes { + if !allowed_tiers.contains(&node.tier) { + continue; + } + // Skip if we already have this UUID + if db.get_node(node.id)?.is_some() { + continue; + } + db.put_node(node)?; + written += 1; + } + + // Merge edges (if both endpoints exist) + for edge in delta.edges { + let from_exists = db.get_node(edge.from_id)?.is_some(); + let to_exists = db.get_node(edge.to_id)?.is_some(); + if from_exists && to_exists { + db.put_edge(edge)?; + } + } + + Ok(written) + } + + // ── Swarm activation ────────────────────────────────────────────────────── + + /// Run spreading activation locally, then fan out to all trusted peers, + /// and merge all results into a unified ranked list. + pub async fn swarm_activate( + &self, + req: SwarmActivateRequest, + ) -> anyhow::Result { + // Local activation + let local_results: Vec = { + let db = self + .db + .lock() + .map_err(|_| anyhow::anyhow!("db lock poisoned"))?; + let activated = db.activate( + &req.seeds, + &req.query_embedding, + req.max_depth, + req.limit, + )?; + activated.into_iter().map(Into::into).collect() + }; + + let mut peer_results: Vec = Vec::new(); + + if req.include_peers { + // Fan out to all trusted peers in parallel + let trusted_peers: Vec = self + .peers + .iter() + .filter(|p| p.trusted) + .cloned() + .collect(); + + let mut handles = Vec::new(); + for peer in trusted_peers { + let seeds = req.seeds.clone(); + let embedding = req.query_embedding.clone(); + let max_depth = req.max_depth; + let limit = req.limit; + let our_id = self.our_id; + + handles.push(tokio::spawn(async move { + let client = SyncClient::new(peer.clone(), our_id); + match client + .remote_activate(&seeds, &embedding, max_depth, limit) + .await + { + Ok(results) => PeerActivationResult { + peer_id: peer.id, + peer_name: peer.name, + results, + error: None, + }, + Err(e) => PeerActivationResult { + peer_id: peer.id, + peer_name: peer.name, + results: Vec::new(), + error: Some(e.to_string()), + }, + } + })); + } + + for handle in handles { + match handle.await { + Ok(result) => peer_results.push(result), + Err(e) => peer_results.push(PeerActivationResult { + peer_id: Uuid::nil(), + peer_name: "unknown".into(), + results: Vec::new(), + error: Some(format!("task error: {}", e)), + }), + } + } + } + + let merged = merge_activation_results(&local_results, &peer_results, req.limit); + + Ok(SwarmActivateResponse { + local_results, + peer_results, + merged, + }) + } + + // ── Peer health check ───────────────────────────────────────────────────── + + /// Check which peers are reachable and return their status. + pub async fn peer_statuses(&self) -> Vec { + let mut statuses = Vec::new(); + for peer in &self.peers { + let client = SyncClient::new(peer.clone(), self.our_id); + // We attempt a health check by pulling an empty delta (since=now) + let reachable = client.pull_delta(now_ms()).await.is_ok(); + statuses.push(PeerStatus { + peer_id: peer.id, + peer_name: peer.name.clone(), + address: peer.address.clone(), + last_sync_at: peer.last_sync_at, + reachable, + sync_tiers: peer.sync_tiers.clone(), + trusted: peer.trusted, + }); + } + statuses + } +} + +// ── Merge logic ─────────────────────────────────────────────────────────────── + +/// Merge local and peer activation results into a unified ranked list. +/// +/// Deduplication: two nodes are considered duplicates if they have the same UUID. +/// When duplicates occur, the one with the highest activation strength is kept. +/// The merged list is sorted by activation_strength descending and truncated to `limit`. +pub fn merge_activation_results( + local: &[SerializableActivatedNode], + peer_results: &[PeerActivationResult], + limit: usize, +) -> Vec { + use std::collections::HashMap; + + // (uuid -> MergedActivatedNode) — we keep the strongest instance of each node + let mut map: HashMap = HashMap::new(); + + // Process local results first (source_peer = None) + for item in local { + let id = item.node.id; + let candidate = MergedActivatedNode { + content: String::from_utf8_lossy(&item.node.content).to_string(), + node_type: item.node.node_type.clone(), + tier: item.node.tier.clone(), + activation_strength: item.activation_strength, + source_peer: None, + hops: item.hops, + node: item.node.clone(), + }; + map.entry(id) + .and_modify(|existing| { + if item.activation_strength > existing.activation_strength { + *existing = candidate.clone(); + } + }) + .or_insert(candidate); + } + + // Process peer results + for peer_result in peer_results { + if peer_result.error.is_some() { + continue; + } + for item in &peer_result.results { + let id = item.node.id; + let candidate = MergedActivatedNode { + content: String::from_utf8_lossy(&item.node.content).to_string(), + node_type: item.node.node_type.clone(), + tier: item.node.tier.clone(), + activation_strength: item.activation_strength, + source_peer: Some(peer_result.peer_id), + hops: item.hops, + node: item.node.clone(), + }; + map.entry(id) + .and_modify(|existing| { + if item.activation_strength > existing.activation_strength { + *existing = candidate.clone(); + } + }) + .or_insert(candidate); + } + } + + // Sort by strength descending, take top N + let mut merged: Vec = map.into_values().collect(); + merged.sort_by(|a, b| { + b.activation_strength + .partial_cmp(&a.activation_strength) + .unwrap_or(std::cmp::Ordering::Equal) + }); + merged.truncate(limit); + merged +} + +// ── Tier helpers ────────────────────────────────────────────────────────────── + +/// Compute the effective sync tiers for a peer — intersection of the peer's +/// own allowlist and our defaults. Untrusted peers are further restricted +/// to Semantic only. +fn effective_tiers<'a>(peer: &Peer, defaults: &'a [MemoryTier]) -> Vec { + if !peer.trusted { + // Untrusted: Semantic only, regardless of configuration + return vec![MemoryTier::Semantic]; + } + if peer.sync_tiers.is_empty() { + defaults.to_vec() + } else { + // Intersection: only tiers that both us and the peer agree on + defaults + .iter() + .filter(|t| peer.sync_tiers.contains(t)) + .cloned() + .collect() + } +} diff --git a/engram/crates/engram-sync/src/lib.rs b/engram/crates/engram-sync/src/lib.rs new file mode 100644 index 0000000..b68be7d --- /dev/null +++ b/engram/crates/engram-sync/src/lib.rs @@ -0,0 +1,265 @@ +/// Engram Sync — swarm memory protocol for distributed Engram instances. +/// +/// This crate turns Engram from a local-first database into a distributed +/// swarm memory protocol. Multiple independent Engram instances (peers) can +/// share memory across each other using delta sync and can fan spreading +/// activation out across the swarm, merging results by strength. +/// +/// # Architecture +/// +/// ```text +/// [Neuron-A Engram] <-> sync <-> [Neuron-B Engram] +/// | +/// [Neuron-C Engram] +/// +/// Swarm activation: seed on A → propagate locally → fan-out to B and C +/// → merge all results → unified ranked response +/// ``` +/// +/// # Protocol +/// +/// - Each peer is local and authoritative. There is no central server. +/// - Peers sync via delta exchange: "give me everything since timestamp T". +/// - Only configured memory tiers flow between peers (Semantic by default; +/// Episodic and Working are private unless explicitly enabled). +/// - Trusted peers get the full configured tier set; untrusted peers get +/// Semantic only. +/// - Swarm activation fans out to all trusted peers in parallel, deduplicates +/// by UUID (keeping strongest activation), and re-ranks. + +pub mod client; +pub mod engine; +pub mod types; + +// Public surface +pub use engine::{merge_activation_results, SyncEngine}; +pub use types::{ + MergedActivatedNode, Peer, PeerActivationResult, PeerStatus, PeerSyncResult, + SerializableActivatedNode, SyncConfig, SyncDelta, SyncReport, SwarmActivateRequest, + SwarmActivateResponse, +}; + +#[cfg(test)] +mod tests { + use super::*; + use engram_core::types::{MemoryTier, Node, NodeType}; + use uuid::Uuid; + + fn make_node(tier: MemoryTier) -> Node { + Node::new( + NodeType::Concept, + vec![0.1, 0.2, 0.3], + b"test content".to_vec(), + tier, + 0.5, + ) + } + + fn make_activated(node: Node, strength: f32, hops: u8) -> SerializableActivatedNode { + SerializableActivatedNode { + node, + activation_strength: strength, + hops, + } + } + + // ── merge_activation_results tests ─────────────────────────────────────── + + #[test] + fn merge_empty() { + let merged = merge_activation_results(&[], &[], 10); + assert!(merged.is_empty()); + } + + #[test] + fn merge_local_only() { + let node = make_node(MemoryTier::Semantic); + let node_id = node.id; + let local = vec![make_activated(node, 0.8, 1)]; + let merged = merge_activation_results(&local, &[], 10); + assert_eq!(merged.len(), 1); + assert_eq!(merged[0].node.id, node_id); + assert!(merged[0].source_peer.is_none(), "local nodes have no source_peer"); + assert!((merged[0].activation_strength - 0.8).abs() < f32::EPSILON); + } + + #[test] + fn merge_peer_result_included() { + let local: Vec = vec![]; + let node = make_node(MemoryTier::Semantic); + let peer_id = Uuid::new_v4(); + let peer_results = vec![PeerActivationResult { + peer_id, + peer_name: "peer-a".into(), + results: vec![make_activated(node, 0.6, 2)], + error: None, + }]; + let merged = merge_activation_results(&local, &peer_results, 10); + assert_eq!(merged.len(), 1); + assert_eq!(merged[0].source_peer, Some(peer_id)); + } + + #[test] + fn merge_deduplicates_by_uuid_keeps_strongest() { + let node = make_node(MemoryTier::Semantic); + let id = node.id; + + // Same node appears locally at 0.4 and from a peer at 0.9 + let local = vec![make_activated(node.clone(), 0.4, 1)]; + let peer_id = Uuid::new_v4(); + let peer_results = vec![PeerActivationResult { + peer_id, + peer_name: "peer-a".into(), + results: vec![make_activated(node, 0.9, 1)], + error: None, + }]; + + let merged = merge_activation_results(&local, &peer_results, 10); + // Should be deduplicated to 1 result + assert_eq!(merged.len(), 1); + // The stronger version (0.9, from peer) should win + assert!((merged[0].activation_strength - 0.9).abs() < f32::EPSILON); + assert_eq!(merged[0].source_peer, Some(peer_id)); + } + + #[test] + fn merge_respects_limit() { + let local: Vec = (0..20) + .map(|i| make_activated(make_node(MemoryTier::Semantic), i as f32 / 20.0, 1)) + .collect(); + let merged = merge_activation_results(&local, &[], 5); + assert_eq!(merged.len(), 5, "limit must be respected"); + } + + #[test] + fn merge_sorted_by_strength_descending() { + let strengths = vec![0.3f32, 0.9, 0.1, 0.7, 0.5]; + let local: Vec = strengths + .iter() + .map(|&s| make_activated(make_node(MemoryTier::Semantic), s, 1)) + .collect(); + let merged = merge_activation_results(&local, &[], 10); + let result_strengths: Vec = merged.iter().map(|m| m.activation_strength).collect(); + // Should be in descending order + for window in result_strengths.windows(2) { + assert!(window[0] >= window[1], "results must be sorted descending"); + } + } + + #[test] + fn merge_skips_errored_peers() { + let peer_results = vec![PeerActivationResult { + peer_id: Uuid::new_v4(), + peer_name: "failed-peer".into(), + results: vec![make_activated(make_node(MemoryTier::Semantic), 0.9, 1)], + error: Some("connection refused".into()), + }]; + let merged = merge_activation_results(&[], &peer_results, 10); + // Errored peers should be excluded + assert!(merged.is_empty()); + } + + // ── SyncDelta serialization ─────────────────────────────────────────────── + + #[test] + fn sync_delta_roundtrips_json() { + let delta = SyncDelta { + peer_id: Uuid::new_v4(), + since: 1000, + nodes: vec![make_node(MemoryTier::Semantic)], + edges: vec![], + tombstones: vec![Uuid::new_v4()], + generated_at: 2000, + }; + let json = serde_json::to_string(&delta).expect("serialize delta"); + let decoded: SyncDelta = serde_json::from_str(&json).expect("deserialize delta"); + assert_eq!(delta.peer_id, decoded.peer_id); + assert_eq!(delta.since, decoded.since); + assert_eq!(delta.nodes.len(), decoded.nodes.len()); + assert_eq!(delta.tombstones.len(), decoded.tombstones.len()); + } + + // ── SyncEngine peer management ──────────────────────────────────────────── + + #[test] + fn engine_add_remove_peer() { + use engram_core::EngramDb; + use std::sync::{Arc, Mutex}; + + let dir = tempfile::tempdir().unwrap(); + let db = Arc::new(Mutex::new(EngramDb::open(dir.path()).unwrap())); + let config = SyncConfig::default(); + let mut engine = SyncEngine::new(db, config); + + assert_eq!(engine.list_peers().len(), 0); + + let peer = Peer { + id: Uuid::new_v4(), + name: "test-peer".into(), + address: "http://localhost:9999".into(), + api_key: "secret".into(), + sync_tiers: vec![MemoryTier::Semantic], + last_sync_at: 0, + trusted: true, + }; + let peer_id = peer.id; + engine.add_peer(peer); + assert_eq!(engine.list_peers().len(), 1); + + engine.remove_peer(peer_id); + assert_eq!(engine.list_peers().len(), 0); + } + + #[test] + fn engine_add_peer_replaces_existing() { + use engram_core::EngramDb; + use std::sync::{Arc, Mutex}; + + let dir = tempfile::tempdir().unwrap(); + let db = Arc::new(Mutex::new(EngramDb::open(dir.path()).unwrap())); + let mut engine = SyncEngine::new(db, SyncConfig::default()); + + let id = Uuid::new_v4(); + for i in 0..3 { + engine.add_peer(Peer { + id, + name: format!("peer-v{}", i), + address: "http://localhost:1234".into(), + api_key: "k".into(), + sync_tiers: vec![], + last_sync_at: 0, + trusted: false, + }); + } + // Should still be just one peer (latest version) + assert_eq!(engine.list_peers().len(), 1); + assert_eq!(engine.list_peers()[0].name, "peer-v2"); + } + + // ── generate_delta ──────────────────────────────────────────────────────── + + #[test] + fn generate_delta_filters_by_tier() { + use engram_core::types::MemoryTier; + use engram_core::EngramDb; + use std::sync::{Arc, Mutex}; + + let dir = tempfile::tempdir().unwrap(); + let db = Arc::new(Mutex::new(EngramDb::open(dir.path()).unwrap())); + + // Insert nodes in different tiers + { + let db_locked = db.lock().unwrap(); + db_locked.put_node(make_node(MemoryTier::Semantic)).unwrap(); + db_locked.put_node(make_node(MemoryTier::Episodic)).unwrap(); + db_locked.put_node(make_node(MemoryTier::Working)).unwrap(); + } + + let engine = SyncEngine::new(db, SyncConfig::default()); + + // Only request Semantic tier + let delta = engine.generate_delta(0, &[MemoryTier::Semantic]).unwrap(); + assert_eq!(delta.nodes.len(), 1, "only Semantic node should be in delta"); + assert!(delta.nodes[0].tier == MemoryTier::Semantic); + } +} diff --git a/engram/crates/engram-sync/src/types.rs b/engram/crates/engram-sync/src/types.rs new file mode 100644 index 0000000..b0bbb4e --- /dev/null +++ b/engram/crates/engram-sync/src/types.rs @@ -0,0 +1,166 @@ +use engram_core::types::{ActivatedNode, Edge, MemoryTier, Node, NodeType}; +use serde::{Deserialize, Serialize}; +use uuid::Uuid; + +/// A remote peer that this Engram instance syncs with. +#[derive(Debug, Clone, Serialize, Deserialize)] +pub struct Peer { + /// Stable unique identity for this peer + pub id: Uuid, + /// Human-readable name (e.g. "neuron-will", "neuron-sarah") + pub name: String, + /// Base URL of the peer's Engram server (e.g. "https://engram.neurontechnologies.ai") + pub address: String, + /// Shared secret used in the Authorization: Bearer header + pub api_key: String, + /// Which memory tiers are allowed to flow to/from this peer. + /// Semantic by default — Episodic is private unless explicitly opted in. + pub sync_tiers: Vec, + /// Unix milliseconds of the last successful sync. 0 if never synced. + pub last_sync_at: i64, + /// Trusted peers get all configured tiers; untrusted peers get Semantic only. + pub trusted: bool, +} + +/// An incremental change set — everything that changed since a given timestamp. +/// Exchanged between peers during sync. +#[derive(Debug, Clone, Serialize, Deserialize)] +pub struct SyncDelta { + /// UUID of the peer that generated this delta + pub peer_id: Uuid, + /// All nodes modified or added after this Unix ms timestamp + pub since: i64, + /// Nodes added or modified since `since` + pub nodes: Vec, + /// Edges added or modified since `since` + pub edges: Vec, + /// Node IDs that were deleted (tombstones) — receivers should remove them + pub tombstones: Vec, + /// When this delta was generated + pub generated_at: i64, +} + +/// Request to fan spreading activation out across the swarm. +#[derive(Debug, Clone, Serialize, Deserialize)] +pub struct SwarmActivateRequest { + /// Seed node IDs to start activation from + pub seeds: Vec, + /// Query embedding for semantic scoring + pub query_embedding: Vec, + /// Maximum graph hops per peer + pub max_depth: u8, + /// Maximum results to return per peer (before merge) + pub limit: usize, + /// If true, fan out to all trusted peers and merge results + pub include_peers: bool, +} + +/// Response from a swarm activation — local results, per-peer results, and +/// the unified merged ranking across all sources. +#[derive(Debug, Clone, Serialize, Deserialize)] +pub struct SwarmActivateResponse { + pub local_results: Vec, + pub peer_results: Vec, + /// Deduplicated, re-ranked unified results from all sources + pub merged: Vec, +} + +/// ActivatedNode serializable form (ActivatedNode in engram-core is not Serialize). +#[derive(Debug, Clone, Serialize, Deserialize)] +pub struct SerializableActivatedNode { + pub node: Node, + pub activation_strength: f32, + pub hops: u8, +} + +impl From for SerializableActivatedNode { + fn from(a: ActivatedNode) -> Self { + Self { + node: a.node, + activation_strength: a.activation_strength, + hops: a.hops, + } + } +} + +/// Activation results from a single remote peer. +#[derive(Debug, Clone, Serialize, Deserialize)] +pub struct PeerActivationResult { + pub peer_id: Uuid, + pub peer_name: String, + /// Successfully retrieved results (empty on error) + pub results: Vec, + /// Set if the peer request failed + pub error: Option, +} + +/// A node in the merged swarm result set — annotated with its origin peer. +#[derive(Debug, Clone, Serialize, Deserialize)] +pub struct MergedActivatedNode { + pub content: String, + pub node_type: NodeType, + pub tier: MemoryTier, + /// Composite activation strength after merging + pub activation_strength: f32, + /// None = local, Some(uuid) = from that peer + pub source_peer: Option, + pub hops: u8, + /// Full node for callers who need it + pub node: Node, +} + +/// Aggregate report from a full sync cycle. +#[derive(Debug, Clone, Serialize, Deserialize)] +pub struct SyncReport { + pub peers_synced: usize, + pub nodes_received: usize, + pub nodes_sent: usize, + pub errors: Vec, +} + +/// Result from syncing a single peer. +#[derive(Debug, Clone)] +pub struct PeerSyncResult { + pub peer_id: Uuid, + pub nodes_received: usize, + pub nodes_sent: usize, +} + +/// Configuration for the sync engine. +#[derive(Debug, Clone)] +pub struct SyncConfig { + /// This instance's stable UUID + pub our_id: Uuid, + /// Human name for this instance + pub our_name: String, + /// API key peers use to authenticate with us + pub api_key: String, + /// Which tiers to sync by default (peers may also restrict this) + pub default_sync_tiers: Vec, + /// How often to run background sync, in seconds. Default: 300 (5 min) + pub sync_interval_secs: u64, +} + +impl Default for SyncConfig { + fn default() -> Self { + Self { + our_id: Uuid::new_v4(), + our_name: "engram-local".to_string(), + api_key: Uuid::new_v4().to_string(), + default_sync_tiers: vec![MemoryTier::Semantic], + sync_interval_secs: 300, + } + } +} + +/// Swarm peer health info for the /swarm/status endpoint. +#[derive(Debug, Clone, Serialize, Deserialize)] +pub struct PeerStatus { + pub peer_id: Uuid, + pub peer_name: String, + pub address: String, + pub last_sync_at: i64, + pub reachable: bool, + pub sync_tiers: Vec, + pub trusted: bool, +} diff --git a/engram/studio/index.html b/engram/studio/index.html new file mode 100644 index 0000000..6854609 --- /dev/null +++ b/engram/studio/index.html @@ -0,0 +1,3258 @@ + + + + + +Engram Studio + + + + + + + + + + +
+
+
Graph
+
Nodes
+
Timeline
+
Console
+
Swarm
+
+ +
+ + +
+
+ +
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Tiers
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Working
+
Episodic
+
Semantic
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Procedural
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+ + × +
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+ + +
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All
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Working
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+ +
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+ + + + + + + + + + + + + +
ID ↕Type ↕Tier ↕ContentSalience ↕Activations ↕Last Active ↕
+
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+ + × +
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Connections
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+ + +
+ +
+ + +
+
+
+ engram> + +
+
+ + + + +
+
+ + + + +
+ + + + From 69410a69081ae7844747fa58354ae34e467e8d38 Mon Sep 17 00:00:00 2001 From: Will Anderson Date: Mon, 27 Apr 2026 17:30:20 -0500 Subject: [PATCH 04/18] =?UTF-8?q?feat:=20serve=20studio=20from=20engram-se?= =?UTF-8?q?rver=20=E2=80=94=20browser=20is=20the=20runtime,=20no=20Electro?= =?UTF-8?q?n?= MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit --- engram/crates/engram-server/Cargo.toml | 2 ++ engram/crates/engram-server/src/main.rs | 47 +++++++++++++++++++++++++ 2 files changed, 49 insertions(+) diff --git a/engram/crates/engram-server/Cargo.toml b/engram/crates/engram-server/Cargo.toml index 5edada8..80d32f6 100644 --- a/engram/crates/engram-server/Cargo.toml +++ b/engram/crates/engram-server/Cargo.toml @@ -16,6 +16,8 @@ axum = { version = "0.7", features = ["json"] } tokio = { version = "1", features = ["full"] } tower = "0.4" tower-http = { version = "0.5", features = ["cors", "fs"] } +rust-embed = { version = "8", features = ["axum"] } +mime_guess = "2" serde = { version = "1", features = ["derive"] } serde_json = "1" uuid = { version = "1", features = ["v4", "serde"] } diff --git a/engram/crates/engram-server/src/main.rs b/engram/crates/engram-server/src/main.rs index 7825301..1f49645 100644 --- a/engram/crates/engram-server/src/main.rs +++ b/engram/crates/engram-server/src/main.rs @@ -28,17 +28,58 @@ use std::sync::{Arc, Mutex}; use std::time::Duration; use axum::{ + body::Body, + http::{header, StatusCode}, middleware, + response::{IntoResponse, Response}, routing::{delete, get, post}, Router, }; use engram_core::EngramDb; use engram_sync::{SyncConfig, SyncEngine}; +use mime_guess::from_path; +use rust_embed::RustEmbed; use tokio::time::interval; use tower_http::cors::CorsLayer; use tracing::info; use tracing_subscriber::EnvFilter; +#[derive(RustEmbed)] +#[folder = "../../studio/"] +struct Studio; + +async fn serve_studio_index() -> impl IntoResponse { + match Studio::get("index.html") { + Some(content) => Response::builder() + .status(StatusCode::OK) + .header(header::CONTENT_TYPE, "text/html; charset=utf-8") + .body(Body::from(content.data.into_owned())) + .unwrap(), + None => Response::builder() + .status(StatusCode::NOT_FOUND) + .body(Body::from("Studio not found")) + .unwrap(), + } +} + +async fn serve_studio_asset(uri: axum::extract::Path) -> impl IntoResponse { + let path = uri.0; + match Studio::get(&path) { + Some(content) => { + let mime = from_path(&path).first_or_octet_stream(); + Response::builder() + .status(StatusCode::OK) + .header(header::CONTENT_TYPE, mime.as_ref()) + .body(Body::from(content.data.into_owned())) + .unwrap() + } + None => Response::builder() + .status(StatusCode::NOT_FOUND) + .body(Body::from("Not found")) + .unwrap(), + } +} + mod auth; mod routes; mod state; @@ -151,7 +192,13 @@ async fn main() -> anyhow::Result<()> { .route("/decay", post(routes::core::decay)) .route("/consolidate", post(routes::core::consolidate)); + let studio_routes = Router::new() + .route("/", get(serve_studio_index)) + .route("/studio", get(serve_studio_index)) + .route("/studio/{*path}", get(serve_studio_asset)); + let app = Router::new() + .merge(studio_routes) .merge(core_routes) .merge(sync_routes) .layer(CorsLayer::permissive()) From 192528543f1ceae0575f637e87b536fd5ad89d2f Mon Sep 17 00:00:00 2001 From: Will Anderson Date: Mon, 27 Apr 2026 18:26:46 -0500 Subject: [PATCH 05/18] feat: schema projections, command transactions, quantum-secure encryption --- engram/Cargo.lock | 350 ++- engram/Cargo.toml | 3 + engram/crates/engram-crypto/Cargo.toml | 34 + engram/crates/engram-crypto/src/algorithm.rs | 87 + engram/crates/engram-crypto/src/engine.rs | 340 +++ engram/crates/engram-crypto/src/error.rs | 30 + engram/crates/engram-crypto/src/lib.rs | 43 + engram/crates/engram-crypto/src/registry.rs | 95 + engram/crates/engram-projection/Cargo.toml | 17 + engram/crates/engram-projection/src/engine.rs | 462 ++++ engram/crates/engram-projection/src/error.rs | 24 + engram/crates/engram-projection/src/lib.rs | 33 + .../crates/engram-projection/src/registry.rs | 133 + engram/crates/engram-projection/src/schema.rs | 133 + engram/crates/engram-server/Cargo.toml | 4 + engram/crates/engram-server/src/main.rs | 38 + engram/crates/engram-server/src/routes/mod.rs | 2 + .../engram-server/src/routes/projection.rs | 121 + engram/crates/engram-server/src/routes/tx.rs | 109 + engram/crates/engram-server/src/state.rs | 6 + engram/crates/engram-tx/Cargo.toml | 17 + engram/crates/engram-tx/src/command.rs | 166 ++ engram/crates/engram-tx/src/engine.rs | 710 +++++ engram/crates/engram-tx/src/error.rs | 31 + engram/crates/engram-tx/src/lib.rs | 29 + engram/crates/engram-tx/src/log.rs | 151 ++ engram/engram-explainer.html | 2296 +++++++++++++++++ 27 files changed, 5460 insertions(+), 4 deletions(-) create mode 100644 engram/crates/engram-crypto/Cargo.toml create mode 100644 engram/crates/engram-crypto/src/algorithm.rs create mode 100644 engram/crates/engram-crypto/src/engine.rs create mode 100644 engram/crates/engram-crypto/src/error.rs create mode 100644 engram/crates/engram-crypto/src/lib.rs create mode 100644 engram/crates/engram-crypto/src/registry.rs create mode 100644 engram/crates/engram-projection/Cargo.toml create mode 100644 engram/crates/engram-projection/src/engine.rs create mode 100644 engram/crates/engram-projection/src/error.rs create mode 100644 engram/crates/engram-projection/src/lib.rs create mode 100644 engram/crates/engram-projection/src/registry.rs create mode 100644 engram/crates/engram-projection/src/schema.rs create mode 100644 engram/crates/engram-server/src/routes/projection.rs create mode 100644 engram/crates/engram-server/src/routes/tx.rs create mode 100644 engram/crates/engram-tx/Cargo.toml create mode 100644 engram/crates/engram-tx/src/command.rs create mode 100644 engram/crates/engram-tx/src/engine.rs create mode 100644 engram/crates/engram-tx/src/error.rs create mode 100644 engram/crates/engram-tx/src/lib.rs create mode 100644 engram/crates/engram-tx/src/log.rs create mode 100644 engram/engram-explainer.html diff --git a/engram/Cargo.lock b/engram/Cargo.lock index 5c26306..8e19c4c 100644 --- a/engram/Cargo.lock +++ b/engram/Cargo.lock @@ -2,6 +2,41 @@ # It is not intended for manual editing. version = 4 +[[package]] +name = "aead" +version = "0.5.2" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "d122413f284cf2d62fb1b7db97e02edb8cda96d769b16e443a4f6195e35662b0" +dependencies = [ + "crypto-common", + "generic-array", +] + +[[package]] +name = "aes" +version = "0.8.4" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "b169f7a6d4742236a0a00c541b845991d0ac43e546831af1249753ab4c3aa3a0" +dependencies = [ + "cfg-if", + "cipher", + "cpufeatures 0.2.17", +] + +[[package]] +name = "aes-gcm" +version = "0.10.3" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "831010a0f742e1209b3bcea8fab6a8e149051ba6099432c8cb2cc117dec3ead1" +dependencies = [ + "aead", + "aes", + "cipher", + "ctr", + "ghash", + "subtle", +] + [[package]] name = "ahash" version = "0.8.12" @@ -29,6 +64,18 @@ version = "1.0.102" source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "7f202df86484c868dbad7eaa557ef785d5c66295e41b460ef922eca0723b842c" +[[package]] +name = "arrayref" +version = "0.3.9" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "76a2e8124351fda1ef8aaaa3bbd7ebbcb486bbcd4225aca0aa0d84bb2db8fecb" + +[[package]] +name = "arrayvec" +version = "0.7.6" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "7c02d123df017efcdfbd739ef81735b36c5ba83ec3c59c80a9d7ecc718f92e50" + [[package]] name = "async-trait" version = "0.1.89" @@ -65,7 +112,7 @@ source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "edca88bc138befd0323b20752846e6587272d3b03b0343c8ea28a6f819e6e71f" dependencies = [ "async-trait", - "axum-core", + "axum-core 0.4.5", "bytes", "futures-util", "http 1.4.0", @@ -74,7 +121,7 @@ dependencies = [ "hyper", "hyper-util", "itoa", - "matchit", + "matchit 0.7.3", "memchr", "mime", "percent-encoding", @@ -92,6 +139,34 @@ dependencies = [ "tracing", ] +[[package]] +name = "axum" +version = "0.8.9" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "31b698c5f9a010f6573133b09e0de5408834d0c82f8d7475a89fc1867a71cd90" +dependencies = [ + "axum-core 0.5.6", + "bytes", + "futures-util", + "http 1.4.0", + "http-body", + "http-body-util", + "hyper", + "hyper-util", + "itoa", + "matchit 0.8.4", + "memchr", + "mime", + "percent-encoding", + "pin-project-lite", + "serde_core", + "sync_wrapper", + "tokio", + "tower 0.5.3", + "tower-layer", + "tower-service", +] + [[package]] name = "axum-core" version = "0.4.5" @@ -113,6 +188,24 @@ dependencies = [ "tracing", ] +[[package]] +name = "axum-core" +version = "0.5.6" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "08c78f31d7b1291f7ee735c1c6780ccde7785daae9a9206026862dab7d8792d1" +dependencies = [ + "bytes", + "futures-core", + "http 1.4.0", + "http-body", + "http-body-util", + "mime", + "pin-project-lite", + "sync_wrapper", + "tower-layer", + "tower-service", +] + [[package]] name = "axum-test" version = "14.10.0" @@ -122,7 +215,7 @@ dependencies = [ "anyhow", "async-trait", "auto-future", - "axum", + "axum 0.7.9", "bytes", "cookie", "http 1.4.0", @@ -169,6 +262,29 @@ version = "2.11.1" source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "c4512299f36f043ab09a583e57bceb5a5aab7a73db1805848e8fef3c9e8c78b3" +[[package]] +name = "blake3" +version = "1.8.5" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "0aa83c34e62843d924f905e0f5c866eb1dd6545fc4d719e803d9ba6030371fce" +dependencies = [ + "arrayref", + "arrayvec", + "cc", + "cfg-if", + "constant_time_eq", + "cpufeatures 0.3.0", +] + +[[package]] +name = "block-buffer" +version = "0.10.4" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "3078c7629b62d3f0439517fa394996acacc5cbc91c5a20d8c658e77abd503a71" +dependencies = [ + "generic-array", +] + [[package]] name = "bumpalo" version = "3.20.2" @@ -209,6 +325,16 @@ version = "1.0.4" source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "9330f8b2ff13f34540b44e946ef35111825727b38d33286ef986142615121801" +[[package]] +name = "cipher" +version = "0.4.4" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "773f3b9af64447d2ce9850330c473515014aa235e6a783b02db81ff39e4a3dad" +dependencies = [ + "crypto-common", + "inout", +] + [[package]] name = "combine" version = "4.6.7" @@ -219,6 +345,12 @@ dependencies = [ "memchr", ] +[[package]] +name = "constant_time_eq" +version = "0.4.2" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "3d52eff69cd5e647efe296129160853a42795992097e8af39800e1060caeea9b" + [[package]] name = "cookie" version = "0.18.1" @@ -255,6 +387,24 @@ version = "0.8.7" source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "773648b94d0e5d620f64f280777445740e61fe701025087ec8b57f45c791888b" +[[package]] +name = "cpufeatures" +version = "0.2.17" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "59ed5838eebb26a2bb2e58f6d5b5316989ae9d08bab10e0e6d103e656d1b0280" +dependencies = [ + "libc", +] + +[[package]] +name = "cpufeatures" +version = "0.3.0" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "8b2a41393f66f16b0823bb79094d54ac5fbd34ab292ddafb9a0456ac9f87d201" +dependencies = [ + "libc", +] + [[package]] name = "crc32fast" version = "1.5.0" @@ -289,6 +439,26 @@ version = "0.8.21" source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "d0a5c400df2834b80a4c3327b3aad3a4c4cd4de0629063962b03235697506a28" +[[package]] +name = "crypto-common" +version = "0.1.7" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "78c8292055d1c1df0cce5d180393dc8cce0abec0a7102adb6c7b1eef6016d60a" +dependencies = [ + "generic-array", + "rand_core", + "typenum", +] + +[[package]] +name = "ctr" +version = "0.9.2" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "0369ee1ad671834580515889b80f2ea915f23b8be8d0daa4bbaf2ac5c7590835" +dependencies = [ + "cipher", +] + [[package]] name = "deranged" version = "0.5.8" @@ -304,6 +474,16 @@ version = "0.1.13" source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "56254986775e3233ffa9c4d7d3faaf6d36a2c09d30b20687e9f88bc8bafc16c8" +[[package]] +name = "digest" +version = "0.10.7" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "9ed9a281f7bc9b7576e61468ba615a66a5c8cfdff42420a70aa82701a3b1e292" +dependencies = [ + "block-buffer", + "crypto-common", +] + [[package]] name = "displaydoc" version = "0.2.5" @@ -352,6 +532,21 @@ dependencies = [ "uuid", ] +[[package]] +name = "engram-crypto" +version = "0.1.0" +dependencies = [ + "aes-gcm", + "base64", + "blake3", + "rand", + "serde", + "serde_json", + "tempfile", + "thiserror 1.0.69", + "uuid", +] + [[package]] name = "engram-ffi" version = "0.1.0" @@ -379,17 +574,36 @@ dependencies = [ "engram-core", ] +[[package]] +name = "engram-projection" +version = "0.1.0" +dependencies = [ + "base64", + "engram-core", + "serde", + "serde_json", + "tempfile", + "thiserror 1.0.69", + "uuid", +] + [[package]] name = "engram-server" version = "0.1.0" dependencies = [ "anyhow", - "axum", + "axum 0.7.9", "axum-test", "engram-core", + "engram-crypto", + "engram-projection", "engram-sync", + "engram-tx", + "mime_guess", + "rust-embed", "serde", "serde_json", + "sled", "tempfile", "thiserror 1.0.69", "tokio", @@ -415,6 +629,19 @@ dependencies = [ "uuid", ] +[[package]] +name = "engram-tx" +version = "0.1.0" +dependencies = [ + "engram-core", + "serde", + "serde_json", + "sled", + "tempfile", + "thiserror 1.0.69", + "uuid", +] + [[package]] name = "equivalent" version = "1.0.2" @@ -557,6 +784,16 @@ dependencies = [ "byteorder", ] +[[package]] +name = "generic-array" +version = "0.14.7" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "85649ca51fd72272d7821adaf274ad91c288277713d9c18820d8499a7ff69e9a" +dependencies = [ + "typenum", + "version_check", +] + [[package]] name = "getrandom" version = "0.2.17" @@ -581,6 +818,16 @@ dependencies = [ "wasip3", ] +[[package]] +name = "ghash" +version = "0.5.1" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "f0d8a4362ccb29cb0b265253fb0a2728f592895ee6854fd9bc13f2ffda266ff1" +dependencies = [ + "opaque-debug", + "polyval", +] + [[package]] name = "h2" version = "0.4.13" @@ -906,6 +1153,15 @@ dependencies = [ "serde_core", ] +[[package]] +name = "inout" +version = "0.1.4" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "879f10e63c20629ecabbb64a8010319738c66a5cd0c29b02d63d272b03751d01" +dependencies = [ + "generic-array", +] + [[package]] name = "instant" version = "0.1.13" @@ -1078,6 +1334,12 @@ version = "0.7.3" source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "0e7465ac9959cc2b1404e8e2367b43684a6d13790fe23056cc8c6c5a6b7bcb94" +[[package]] +name = "matchit" +version = "0.8.4" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "47e1ffaa40ddd1f3ed91f717a33c8c0ee23fff369e3aa8772b9605cc1d22f4c3" + [[package]] name = "memchr" version = "2.8.0" @@ -1168,6 +1430,12 @@ version = "1.21.4" source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "9f7c3e4beb33f85d45ae3e3a1792185706c8e16d043238c593331cc7cd313b50" +[[package]] +name = "opaque-debug" +version = "0.3.1" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "c08d65885ee38876c4f86fa503fb49d7b507c2b62552df7c70b2fce627e06381" + [[package]] name = "openssl" version = "0.10.78" @@ -1307,6 +1575,18 @@ version = "0.3.33" source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "19f132c84eca552bf34cab8ec81f1c1dcc229b811638f9d283dceabe58c5569e" +[[package]] +name = "polyval" +version = "0.6.2" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "9d1fe60d06143b2430aa532c94cfe9e29783047f06c0d7fd359a9a51b729fa25" +dependencies = [ + "cfg-if", + "cpufeatures 0.2.17", + "opaque-debug", + "universal-hash", +] + [[package]] name = "potential_utf" version = "0.1.5" @@ -1537,6 +1817,41 @@ dependencies = [ "smallvec", ] +[[package]] +name = "rust-embed" +version = "8.11.0" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "04113cb9355a377d83f06ef1f0a45b8ab8cd7d8b1288160717d66df5c7988d27" +dependencies = [ + "axum 0.8.9", + "rust-embed-impl", + "rust-embed-utils", + "walkdir", +] + +[[package]] +name = "rust-embed-impl" +version = "8.11.0" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "da0902e4c7c8e997159ab384e6d0fc91c221375f6894346ae107f47dd0f3ccaa" +dependencies = [ + "proc-macro2", + "quote", + "rust-embed-utils", + "syn", + "walkdir", +] + +[[package]] +name = "rust-embed-utils" +version = "8.11.0" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "5bcdef0be6fe7f6fa333b1073c949729274b05f123a0ad7efcb8efd878e5c3b1" +dependencies = [ + "sha2", + "walkdir", +] + [[package]] name = "rust-multipart-rfc7578_2" version = "0.6.1" @@ -1739,6 +2054,17 @@ dependencies = [ "serde", ] +[[package]] +name = "sha2" +version = "0.10.9" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "a7507d819769d01a365ab707794a4084392c824f54a7a6a7862f8c3d0892b283" +dependencies = [ + "cfg-if", + "cpufeatures 0.2.17", + "digest", +] + [[package]] name = "sharded-slab" version = "0.1.7" @@ -2185,6 +2511,12 @@ version = "0.2.5" source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "e421abadd41a4225275504ea4d6566923418b7f05506fbc9c0fe86ba7396114b" +[[package]] +name = "typenum" +version = "1.20.0" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "40ce102ab67701b8526c123c1bab5cbe42d7040ccfd0f64af1a385808d2f43de" + [[package]] name = "unicase" version = "2.9.0" @@ -2203,6 +2535,16 @@ version = "0.2.6" source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "ebc1c04c71510c7f702b52b7c350734c9ff1295c464a03335b00bb84fc54f853" +[[package]] +name = "universal-hash" +version = "0.5.1" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "fc1de2c688dc15305988b563c3854064043356019f97a4b46276fe734c4f07ea" +dependencies = [ + "crypto-common", + "subtle", +] + [[package]] name = "untrusted" version = "0.9.0" diff --git a/engram/Cargo.toml b/engram/Cargo.toml index 1e2a64f..6f5cee6 100644 --- a/engram/Cargo.toml +++ b/engram/Cargo.toml @@ -7,6 +7,9 @@ members = [ "crates/engram-migrate", "crates/engram-sync", "crates/engram-server", + "crates/engram-projection", + "crates/engram-tx", + "crates/engram-crypto", # engram-wasm is in bindings/ and compiled separately via wasm-pack # (wasm targets can't be in the same workspace build as native targets) ] diff --git a/engram/crates/engram-crypto/Cargo.toml b/engram/crates/engram-crypto/Cargo.toml new file mode 100644 index 0000000..fd5e8af --- /dev/null +++ b/engram/crates/engram-crypto/Cargo.toml @@ -0,0 +1,34 @@ +[package] +name = "engram-crypto" +version = "0.1.0" +edition = "2021" +description = "Quantum-secure encryption at rest for Engram — AES-256-GCM with PQ upgrade path" +license = "MIT" + +[dependencies] +serde = { version = "1", features = ["derive"] } +serde_json = "1" +uuid = { version = "1", features = ["v4", "serde"] } +thiserror = "1" +# AES-256-GCM symmetric encryption (quantum-resistant at 256-bit key length) +aes-gcm = "0.10" +# BLAKE3 for key derivation (fast, cryptographically strong) +blake3 = "1" +# Random number generation +rand = "0.8" +# Base64 encoding for serialization (used in EncryptedContent serialization) +base64 = "0.22" + +# TODO: Upgrade to post-quantum KEM/signature once crates stabilize. +# Target: ml-kem (CRYSTALS-Kyber / NIST ML-KEM) and ml-dsa (CRYSTALS-Dilithium / NIST ML-DSA). +# As of 2025, the `ml-kem` and `ml-dsa` crates are available on crates.io but not yet +# production-stable for all platforms. The algorithm registry structure below is designed +# so that the upgrade is a drop-in: add the PQ crate, implement the KemAlgorithm variant, +# and new writes use the new algorithm while old records continue to decrypt via the registry. +# +# Uncomment when ready: +# ml-kem = "0.2" # CRYSTALS-Kyber (NIST ML-KEM 768/1024) +# ml-dsa = "0.1" # CRYSTALS-Dilithium (NIST ML-DSA) + +[dev-dependencies] +tempfile = "3" diff --git a/engram/crates/engram-crypto/src/algorithm.rs b/engram/crates/engram-crypto/src/algorithm.rs new file mode 100644 index 0000000..cb761ba --- /dev/null +++ b/engram/crates/engram-crypto/src/algorithm.rs @@ -0,0 +1,87 @@ +/// Algorithm registry types — the versioning layer for crypto algorithm rotation. +/// +/// Each encrypted record carries an `algorithm_id`. The registry maps these IDs +/// to the parameters needed to decrypt. When you rotate algorithms, old records +/// keep their ID and decrypt using the historical version. New records use the +/// new active algorithm. +use serde::{Deserialize, Serialize}; + +/// Key Encapsulation Mechanism algorithms. +/// +/// # Current +/// - `Aes256GcmDirect`: AES-256-GCM with a directly-provided 256-bit key. +/// Quantum-resistant at 256-bit (Grover halves to 128-bit effective security). +/// +/// # Planned (post-quantum upgrade) +/// - `MlKem768`: CRYSTALS-Kyber 768 (NIST ML-KEM Level 3 — 128-bit PQ security) +/// - `MlKem1024`: CRYSTALS-Kyber 1024 (NIST ML-KEM Level 5 — 256-bit PQ security) +/// - `ClassicRsa4096`: RSA-4096 OAEP fallback (NOT quantum-resistant — for compat only) +#[derive(Debug, Clone, PartialEq, Eq, Hash, Serialize, Deserialize)] +pub enum KemAlgorithm { + /// AES-256-GCM with direct key (current default, quantum-resistant at 256-bit) + Aes256GcmDirect, + // TODO: uncomment when ml-kem crate stabilizes + // MlKem768, + // MlKem1024, + // ClassicRsa4096, +} + +impl KemAlgorithm { + pub fn id(&self) -> &'static str { + match self { + KemAlgorithm::Aes256GcmDirect => "aes256gcm-direct-v1", + } + } +} + +/// Signature algorithms for authenticating ciphertext. +/// +/// # Current +/// - `Blake3Mac`: BLAKE3 keyed hash as a MAC (message authentication code). +/// Not a signature in the asymmetric sense, but provides authenticity. +/// +/// # Planned (post-quantum upgrade) +/// - `MlDsa44` / `MlDsa65` / `MlDsa87`: CRYSTALS-Dilithium (NIST ML-DSA) +/// - `SphincsSha256128f`: SPHINCS+ stateless hash-based signature +#[derive(Debug, Clone, PartialEq, Eq, Hash, Serialize, Deserialize)] +pub enum SigAlgorithm { + /// BLAKE3 keyed MAC (current default) + Blake3Mac, + // TODO: uncomment when ml-dsa crate stabilizes + // MlDsa44, // NIST Security Level 2 (128-bit) + // MlDsa65, // NIST Security Level 3 (192-bit) + // MlDsa87, // NIST Security Level 5 (256-bit) + // SphincsSha256128f, // Stateless hash-based, conservative security +} + +impl SigAlgorithm { + pub fn id(&self) -> &'static str { + match self { + SigAlgorithm::Blake3Mac => "blake3-mac-v1", + } + } +} + +/// A versioned algorithm configuration entry. +/// +/// Historical versions are kept in the registry so that old ciphertexts can +/// always be decrypted even after algorithm rotation. +#[derive(Debug, Clone, Serialize, Deserialize)] +pub struct AlgorithmVersion { + /// Unique string ID stored alongside every ciphertext. + pub id: String, + /// The KEM algorithm used for key derivation/encapsulation. + pub kem: KemAlgorithm, + /// The signature algorithm used for ciphertext authentication. + pub sig: SigAlgorithm, + /// Unix milliseconds when this version became active. + pub activated_at: i64, + /// Unix milliseconds when this version was superseded (None = still active). + pub retired_at: Option, +} + +impl AlgorithmVersion { + pub fn is_active(&self) -> bool { + self.retired_at.is_none() + } +} diff --git a/engram/crates/engram-crypto/src/engine.rs b/engram/crates/engram-crypto/src/engine.rs new file mode 100644 index 0000000..bc65f09 --- /dev/null +++ b/engram/crates/engram-crypto/src/engine.rs @@ -0,0 +1,340 @@ +/// CryptoEngine — encrypt and decrypt node content with algorithm versioning. +/// +/// # Security Model +/// +/// - **Symmetric encryption**: AES-256-GCM (authenticated encryption, quantum-resistant) +/// - **Key derivation**: BLAKE3 KDF — stretches the master key into per-operation keys +/// - **Authentication**: BLAKE3 keyed MAC over (algorithm_id || nonce || ciphertext) +/// - **Nonces**: 96-bit random nonce per encryption (from OS CSPRNG via `rand`) +/// +/// # AES-256-GCM and Quantum Resistance +/// +/// AES-256 is considered quantum-resistant: Grover's algorithm provides at most +/// a quadratic speedup, reducing 256-bit security to ~128-bit effective security +/// against quantum adversaries. 128-bit quantum security is currently considered +/// sufficient. The algorithm_id in EncryptedContent ensures an upgrade to +/// ML-KEM/Kyber is a transparent drop-in when the crates stabilize. +use aes_gcm::{ + aead::{Aead, AeadCore, KeyInit, OsRng}, + Aes256Gcm, Key, Nonce, +}; +use serde::{Deserialize, Serialize}; + +use crate::error::{CryptoError, CryptoResult}; +use crate::registry::AlgorithmRegistry; + +/// An encrypted content blob, self-describing with its algorithm version. +/// +/// The `algorithm_id` field allows any version to decrypt any record, +/// even after algorithm rotation. This is the key to migration-free upgrades. +#[derive(Debug, Clone, Serialize, Deserialize)] +pub struct EncryptedContent { + /// Which algorithm version encrypted this record. + /// Maps to an entry in `AlgorithmRegistry::versions`. + pub algorithm_id: String, + /// The AES-256-GCM ciphertext (includes the GCM auth tag). + pub ciphertext: Vec, + /// In a PQ scheme: the KEM-encapsulated symmetric key. + /// In the current AES-direct scheme: empty (key is derived from master key + context). + pub encapsulated_key: Vec, + /// 96-bit random AES-GCM nonce. + pub nonce: Vec, + /// BLAKE3 MAC over (algorithm_id || nonce || ciphertext). + /// In a PQ scheme: this would be a Dilithium/ML-DSA signature. + pub signature: Vec, +} + +impl EncryptedContent { + /// Serialize to a compact JSON string for storage. + pub fn to_bytes(&self) -> CryptoResult> { + serde_json::to_vec(self).map_err(|e| CryptoError::Serialization(e.to_string())) + } + + /// Deserialize from bytes (JSON). + pub fn from_bytes(bytes: &[u8]) -> CryptoResult { + serde_json::from_slice(bytes).map_err(|e| CryptoError::DecryptionFailed(e.to_string())) + } +} + +/// The encryption engine. +/// +/// One engine instance per process (or per-request for stateless usage). +/// The engine holds the master key and the algorithm registry. +pub struct CryptoEngine { + /// Master key bytes — 32 bytes for AES-256. + /// In a PQ scheme: this would be a keypair (public/private). + master_key: [u8; 32], + /// Algorithm registry — tracks active and historical versions. + pub registry: AlgorithmRegistry, +} + +impl CryptoEngine { + /// Create an engine from a 32-byte master key (AES-256 requires 256-bit key). + pub fn from_key(key: &[u8]) -> CryptoResult { + if key.len() < 32 { + return Err(CryptoError::InvalidKeyLength { + expected: 32, + got: key.len(), + }); + } + let mut master_key = [0u8; 32]; + master_key.copy_from_slice(&key[..32]); + Ok(Self { + master_key, + registry: AlgorithmRegistry::default_registry(), + }) + } + + /// Create an engine from an environment variable `ENGRAM_ENCRYPTION_KEY`. + /// + /// Returns `None` if the variable is not set (dev mode — plaintext storage). + /// Returns an error if the variable is set but the key is too short. + pub fn from_env() -> CryptoResult> { + match std::env::var("ENGRAM_ENCRYPTION_KEY") { + Ok(key_str) => { + let key_bytes = key_str.as_bytes(); + // Derive a 32-byte key from whatever the user provided + let derived = derive_key(key_bytes, b"engram-master-key"); + Ok(Some(Self::from_key(&derived)?)) + } + Err(std::env::VarError::NotPresent) => Ok(None), + Err(e) => Err(CryptoError::KeyDerivation(e.to_string())), + } + } + + // ── Encrypt ─────────────────────────────────────────────────────────────── + + /// Encrypt `plaintext` using the active algorithm. + /// + /// Returns an `EncryptedContent` that is self-describing: it carries its + /// `algorithm_id`, so decryption never needs out-of-band version tracking. + pub fn encrypt(&self, plaintext: &[u8]) -> CryptoResult { + let algorithm_id = self.registry.active_id().to_string(); + + // Derive a per-operation encryption key from the master key + let enc_key_bytes = derive_key(&self.master_key, b"encrypt"); + let key = Key::::from_slice(&enc_key_bytes); + let cipher = Aes256Gcm::new(key); + + // Random 96-bit nonce + let nonce = Aes256Gcm::generate_nonce(&mut OsRng); + + // Encrypt + let ciphertext = cipher + .encrypt(&nonce, plaintext) + .map_err(|e| CryptoError::EncryptionFailed(e.to_string()))?; + + // MAC: BLAKE3 keyed hash over (algorithm_id || nonce || ciphertext) + let mac_key = derive_key(&self.master_key, b"mac"); + let signature = compute_mac(&mac_key, &algorithm_id, nonce.as_slice(), &ciphertext); + + Ok(EncryptedContent { + algorithm_id, + ciphertext, + encapsulated_key: vec![], // unused in AES-direct mode + nonce: nonce.to_vec(), + signature, + }) + } + + // ── Decrypt ─────────────────────────────────────────────────────────────── + + /// Decrypt an `EncryptedContent`, dispatching to the correct algorithm version. + pub fn decrypt(&self, content: &EncryptedContent) -> CryptoResult> { + // Look up the algorithm version that produced this ciphertext + let _version = self.registry.get_version(&content.algorithm_id)?; + + // Verify MAC before decrypting (fail-fast on tampering) + let mac_key = derive_key(&self.master_key, b"mac"); + let expected = compute_mac(&mac_key, &content.algorithm_id, &content.nonce, &content.ciphertext); + if expected != content.signature { + return Err(CryptoError::SignatureInvalid); + } + + // Decrypt + let enc_key_bytes = derive_key(&self.master_key, b"encrypt"); + let key = Key::::from_slice(&enc_key_bytes); + let cipher = Aes256Gcm::new(key); + + if content.nonce.len() != 12 { + return Err(CryptoError::DecryptionFailed(format!( + "invalid nonce length: {}", + content.nonce.len() + ))); + } + let nonce = Nonce::from_slice(&content.nonce); + + let plaintext = cipher + .decrypt(nonce, content.ciphertext.as_slice()) + .map_err(|e| CryptoError::DecryptionFailed(e.to_string()))?; + + Ok(plaintext) + } + + // ── Signature verification ───────────────────────────────────────────────── + + /// Verify the MAC/signature on an encrypted content blob. + pub fn verify_signature(&self, content: &EncryptedContent) -> CryptoResult { + let mac_key = derive_key(&self.master_key, b"mac"); + let expected = compute_mac(&mac_key, &content.algorithm_id, &content.nonce, &content.ciphertext); + Ok(expected == content.signature) + } + + // ── Algorithm rotation ──────────────────────────────────────────────────── + + /// Rotate to a new KEM algorithm. + /// + /// After rotation, new encryptions use the new algorithm. + /// Old records retain their `algorithm_id` and decrypt via the historical registry. + pub fn rotate_algorithm(&mut self, new_kem: crate::algorithm::KemAlgorithm) -> CryptoResult<()> { + self.registry.rotate_kem(new_kem) + } +} + +// ── Key derivation ──────────────────────────────────────────────────────────── + +/// Derive a 32-byte sub-key from the master key and a context string. +/// Uses BLAKE3's keyed hash for domain separation. +fn derive_key(master: &[u8], context: &[u8]) -> [u8; 32] { + // BLAKE3 derive_key: master is the key material, context is the domain + let mut hasher = blake3::Hasher::new_keyed( + &padded_32(master), + ); + hasher.update(context); + let hash = hasher.finalize(); + *hash.as_bytes() +} + +/// Pad or truncate bytes to exactly 32 bytes. +fn padded_32(bytes: &[u8]) -> [u8; 32] { + let mut out = [0u8; 32]; + let len = bytes.len().min(32); + out[..len].copy_from_slice(&bytes[..len]); + out +} + +/// Compute a BLAKE3 keyed MAC over (algorithm_id || nonce || ciphertext). +fn compute_mac(mac_key: &[u8; 32], algorithm_id: &str, nonce: &[u8], ciphertext: &[u8]) -> Vec { + let mut hasher = blake3::Hasher::new_keyed(mac_key); + hasher.update(algorithm_id.as_bytes()); + hasher.update(nonce); + hasher.update(ciphertext); + hasher.finalize().as_bytes().to_vec() +} + +#[cfg(test)] +mod tests { + use super::*; + + fn make_engine() -> CryptoEngine { + let key = b"test-master-key-must-be-32-bytes"; + CryptoEngine::from_key(key).unwrap() + } + + #[test] + fn test_encrypt_decrypt_roundtrip() { + let engine = make_engine(); + let plaintext = b"sensitive memory content - do not store unencrypted"; + let enc = engine.encrypt(plaintext).unwrap(); + let dec = engine.decrypt(&enc).unwrap(); + assert_eq!(dec, plaintext); + } + + #[test] + fn test_nonce_is_random() { + let engine = make_engine(); + let enc1 = engine.encrypt(b"same plaintext").unwrap(); + let enc2 = engine.encrypt(b"same plaintext").unwrap(); + // Nonces must differ (probabilistic — collision probability 1/2^96) + assert_ne!(enc1.nonce, enc2.nonce); + // Ciphertexts must differ (different nonces → different ciphertexts) + assert_ne!(enc1.ciphertext, enc2.ciphertext); + } + + #[test] + fn test_tampered_ciphertext_rejected() { + let engine = make_engine(); + let mut enc = engine.encrypt(b"original").unwrap(); + // Flip a byte in the ciphertext + if let Some(b) = enc.ciphertext.first_mut() { + *b ^= 0xFF; + } + // Decryption should fail due to GCM auth tag verification + let result = engine.decrypt(&enc); + assert!(result.is_err()); + } + + #[test] + fn test_tampered_mac_rejected() { + let engine = make_engine(); + let mut enc = engine.encrypt(b"original").unwrap(); + // Flip a byte in the signature + if let Some(b) = enc.signature.first_mut() { + *b ^= 0xFF; + } + let result = engine.decrypt(&enc); + assert!(result.is_err()); + } + + #[test] + fn test_verify_signature() { + let engine = make_engine(); + let enc = engine.encrypt(b"content").unwrap(); + assert!(engine.verify_signature(&enc).unwrap()); + + let mut tampered = enc.clone(); + tampered.signature[0] ^= 0x01; + assert!(!engine.verify_signature(&tampered).unwrap()); + } + + #[test] + fn test_algorithm_id_stored() { + let engine = make_engine(); + let enc = engine.encrypt(b"data").unwrap(); + assert_eq!(enc.algorithm_id, "aes256gcm-direct-v1"); + } + + #[test] + fn test_serialization_roundtrip() { + let engine = make_engine(); + let enc = engine.encrypt(b"serialize me").unwrap(); + let bytes = enc.to_bytes().unwrap(); + let restored = EncryptedContent::from_bytes(&bytes).unwrap(); + let dec = engine.decrypt(&restored).unwrap(); + assert_eq!(dec, b"serialize me"); + } + + #[test] + fn test_short_key_rejected() { + let short_key = b"too-short"; + let result = CryptoEngine::from_key(short_key); + assert!(result.is_err()); + } + + #[test] + fn test_empty_plaintext() { + let engine = make_engine(); + let enc = engine.encrypt(b"").unwrap(); + let dec = engine.decrypt(&enc).unwrap(); + assert_eq!(dec, b""); + } + + #[test] + fn test_large_plaintext() { + let engine = make_engine(); + let plaintext = vec![0xABu8; 1_000_000]; // 1 MB + let enc = engine.encrypt(&plaintext).unwrap(); + let dec = engine.decrypt(&enc).unwrap(); + assert_eq!(dec, plaintext); + } + + #[test] + fn test_unknown_algorithm_rejected() { + let engine = make_engine(); + let mut enc = engine.encrypt(b"data").unwrap(); + enc.algorithm_id = "unknown-algo-v99".to_string(); + let result = engine.decrypt(&enc); + assert!(result.is_err()); + assert!(matches!(result.unwrap_err(), CryptoError::UnknownAlgorithm(_))); + } +} diff --git a/engram/crates/engram-crypto/src/error.rs b/engram/crates/engram-crypto/src/error.rs new file mode 100644 index 0000000..bc11de6 --- /dev/null +++ b/engram/crates/engram-crypto/src/error.rs @@ -0,0 +1,30 @@ +use thiserror::Error; + +#[derive(Debug, Error)] +pub enum CryptoError { + #[error("Encryption failed: {0}")] + EncryptionFailed(String), + + #[error("Decryption failed: {0}")] + DecryptionFailed(String), + + #[error("Signature verification failed")] + SignatureInvalid, + + #[error("Unknown algorithm ID: {0}")] + UnknownAlgorithm(String), + + #[error("Key derivation failed: {0}")] + KeyDerivation(String), + + #[error("Invalid key length: expected {expected}, got {got}")] + InvalidKeyLength { expected: usize, got: usize }, + + #[error("Algorithm not available: {0}")] + AlgorithmUnavailable(String), + + #[error("Serialization error: {0}")] + Serialization(String), +} + +pub type CryptoResult = Result; diff --git a/engram/crates/engram-crypto/src/lib.rs b/engram/crates/engram-crypto/src/lib.rs new file mode 100644 index 0000000..f61f723 --- /dev/null +++ b/engram/crates/engram-crypto/src/lib.rs @@ -0,0 +1,43 @@ +/// Engram Crypto — quantum-secure encryption at rest. +/// +/// # Current Implementation +/// +/// Uses AES-256-GCM for symmetric encryption with BLAKE3 for key derivation. +/// AES-256 is already quantum-resistant (Grover's algorithm halves the key space +/// from 2^256 to 2^128, which remains computationally infeasible). +/// +/// # Post-Quantum Upgrade Path +/// +/// The `AlgorithmRegistry` stores an `algorithm_id` alongside every ciphertext. +/// When ML-KEM (CRYSTALS-Kyber) and ML-DSA (CRYSTALS-Dilithium) crates stabilize, +/// the upgrade is: +/// 1. Add `KemAlgorithm::MlKem768` / `MlKem1024` variants +/// 2. Implement `CryptoEngine::encrypt()` for the new algorithm +/// 3. Set it as the active algorithm in the registry +/// 4. Old records continue to decrypt via their stored `algorithm_id` +/// 5. Background re-encryption rotates old records to the new algorithm +/// +/// No data migration required — the registry handles version negotiation. +/// +/// # Usage +/// +/// ```rust,no_run +/// use engram_crypto::{CryptoEngine, AlgorithmRegistry}; +/// +/// let key = b"an-example-32-byte-key!!12345678"; +/// let engine = CryptoEngine::from_key(key).unwrap(); +/// +/// let plaintext = b"sensitive memory content"; +/// let encrypted = engine.encrypt(plaintext).unwrap(); +/// let decrypted = engine.decrypt(&encrypted).unwrap(); +/// assert_eq!(plaintext, decrypted.as_slice()); +/// ``` +pub mod algorithm; +pub mod engine; +pub mod error; +pub mod registry; + +pub use algorithm::{AlgorithmVersion, KemAlgorithm, SigAlgorithm}; +pub use engine::{CryptoEngine, EncryptedContent}; +pub use error::CryptoError; +pub use registry::AlgorithmRegistry; diff --git a/engram/crates/engram-crypto/src/registry.rs b/engram/crates/engram-crypto/src/registry.rs new file mode 100644 index 0000000..d007b17 --- /dev/null +++ b/engram/crates/engram-crypto/src/registry.rs @@ -0,0 +1,95 @@ +/// Algorithm registry — tracks active and historical algorithm versions. +use std::collections::HashMap; + +use crate::algorithm::{AlgorithmVersion, KemAlgorithm, SigAlgorithm}; +use crate::error::{CryptoError, CryptoResult}; + +/// Maintains the set of algorithm versions known to this node. +/// +/// The active version is used for all new encryptions. +/// Historical versions remain so old ciphertexts can always be decrypted. +pub struct AlgorithmRegistry { + /// The currently active algorithm version. + pub active_kem: KemAlgorithm, + pub active_sig: SigAlgorithm, + /// All known versions (active + historical), keyed by algorithm ID. + pub versions: HashMap, +} + +impl AlgorithmRegistry { + /// Create a registry with the default algorithm (AES-256-GCM + BLAKE3 MAC). + pub fn default_registry() -> Self { + let now = std::time::SystemTime::now() + .duration_since(std::time::UNIX_EPOCH) + .unwrap_or_default() + .as_millis() as i64; + + let default_version = AlgorithmVersion { + id: "aes256gcm-direct-v1".to_string(), + kem: KemAlgorithm::Aes256GcmDirect, + sig: SigAlgorithm::Blake3Mac, + activated_at: now, + retired_at: None, + }; + + let mut versions = HashMap::new(); + versions.insert(default_version.id.clone(), default_version); + + Self { + active_kem: KemAlgorithm::Aes256GcmDirect, + active_sig: SigAlgorithm::Blake3Mac, + versions, + } + } + + /// Get the active algorithm ID (used as the `algorithm_id` in new ciphertexts). + pub fn active_id(&self) -> &str { + self.active_kem.id() + } + + /// Look up a version by its ID (for decryption of historical records). + pub fn get_version(&self, id: &str) -> CryptoResult<&AlgorithmVersion> { + self.versions + .get(id) + .ok_or_else(|| CryptoError::UnknownAlgorithm(id.to_string())) + } + + /// Rotate to a new KEM algorithm. + /// + /// The current active version is marked as retired. A new version entry is + /// added and becomes active. Old records retain their algorithm_id and can + /// still be decrypted via `get_version()`. + /// + /// Background re-encryption can then update old records at leisure. + pub fn rotate_kem(&mut self, new_kem: KemAlgorithm) -> CryptoResult<()> { + let now = std::time::SystemTime::now() + .duration_since(std::time::UNIX_EPOCH) + .unwrap_or_default() + .as_millis() as i64; + + // Retire current active version + if let Some(current) = self.versions.get_mut(self.active_kem.id()) { + current.retired_at = Some(now); + } + + let new_id = new_kem.id().to_string(); + let new_version = AlgorithmVersion { + id: new_id.clone(), + kem: new_kem.clone(), + sig: self.active_sig.clone(), + activated_at: now, + retired_at: None, + }; + + self.versions.insert(new_id, new_version); + self.active_kem = new_kem; + Ok(()) + } + + /// List all versions, active and historical. + pub fn list_versions(&self) -> Vec<&AlgorithmVersion> { + let mut vs: Vec<&AlgorithmVersion> = self.versions.values().collect(); + vs.sort_by_key(|v| v.activated_at); + vs + } +} diff --git a/engram/crates/engram-projection/Cargo.toml b/engram/crates/engram-projection/Cargo.toml new file mode 100644 index 0000000..cea9859 --- /dev/null +++ b/engram/crates/engram-projection/Cargo.toml @@ -0,0 +1,17 @@ +[package] +name = "engram-projection" +version = "0.1.0" +edition = "2021" +description = "Schema/projection layer for Engram — schema-free views over the activation surface" +license = "MIT" + +[dependencies] +engram-core = { path = "../engram-core" } +serde = { version = "1", features = ["derive"] } +serde_json = "1" +uuid = { version = "1", features = ["v4", "serde"] } +thiserror = "1" +base64 = "0.22" + +[dev-dependencies] +tempfile = "3" diff --git a/engram/crates/engram-projection/src/engine.rs b/engram/crates/engram-projection/src/engine.rs new file mode 100644 index 0000000..dd91d91 --- /dev/null +++ b/engram/crates/engram-projection/src/engine.rs @@ -0,0 +1,462 @@ +/// Projection engine — maps activated nodes through a ProjectionSchema. +/// +/// The engine is stateless: it takes a schema and a result set, and returns +/// the projected view. No mutation of the underlying graph occurs. +use base64::{engine::general_purpose::STANDARD as B64, Engine as _}; +use engram_core::types::{ActivatedNode, NodeType}; +use serde_json::{json, Value}; +use std::collections::HashMap; +use uuid::Uuid; + +use crate::error::ProjectionResult; +use crate::schema::{ + FieldMapping, FieldSource, NodeFilter, ProjectedRow, ProjectionResult as PResult, + ProjectionSchema, ProjectionType, +}; + +/// Stateless projection executor. +pub struct ProjectionEngine; + +impl ProjectionEngine { + /// Apply a projection schema to a set of activated nodes. + /// + /// Returns a `ProjectionResult` containing the shaped output. + /// The activation result set is not modified. + pub fn project( + schema: &ProjectionSchema, + activated: &[ActivatedNode], + ) -> ProjectionResult { + // Step 1: filter to in-scope nodes + let in_scope: Vec<&ActivatedNode> = activated + .iter() + .filter(|a| matches_filter(a, &schema.node_filter)) + .collect(); + + let nodes_in_scope = in_scope.len(); + + match schema.projection_type { + ProjectionType::Relational | ProjectionType::Document => { + let rows = in_scope + .iter() + .map(|a| project_row(a, &schema.field_mappings)) + .collect::>>()?; + + Ok(PResult { + schema_name: schema.name.clone(), + nodes_in_scope, + rows, + key_value: None, + wide_column: None, + }) + } + + ProjectionType::KeyValue => { + let mut kv: HashMap = HashMap::new(); + for a in &in_scope { + let key = a.node.id.to_string(); + let val = String::from_utf8_lossy(&a.node.content).to_string(); + kv.insert(key, Value::String(val)); + } + Ok(PResult { + schema_name: schema.name.clone(), + nodes_in_scope, + rows: vec![], + key_value: Some(kv), + wide_column: None, + }) + } + + ProjectionType::WideColumn => { + let mut wc: HashMap> = HashMap::new(); + for a in &in_scope { + let id = a.node.id.to_string(); + let mut cols = HashMap::new(); + for mapping in &schema.field_mappings { + let val = extract_field(a, &mapping.source) + .unwrap_or_else(|| mapping.default.clone().unwrap_or(Value::Null)); + cols.insert(mapping.field_name.clone(), val); + } + wc.insert(id, cols); + } + Ok(PResult { + schema_name: schema.name.clone(), + nodes_in_scope, + rows: vec![], + key_value: None, + wide_column: Some(wc), + }) + } + } + } +} + +// ── Node filter evaluation ──────────────────────────────────────────────────── + +fn matches_filter(a: &ActivatedNode, filter: &NodeFilter) -> bool { + match filter { + NodeFilter::All => true, + + NodeFilter::ByType(types) => { + let node_type_str = node_type_str(&a.node.node_type); + types.iter().any(|t| t == node_type_str) + } + + NodeFilter::ByTier(tiers) => tiers.iter().any(|t| t == &a.node.tier), + + NodeFilter::ByTag(tags) => { + // Tags are searched in content (treated as UTF-8) as a simple substring match. + // This is intentionally lenient — callers may embed tag metadata in content. + let content_str = String::from_utf8_lossy(&a.node.content); + tags.iter().any(|tag| content_str.contains(tag.as_str())) + } + + NodeFilter::ByActivationThreshold(threshold) => a.activation_strength >= *threshold, + + NodeFilter::BySalience(threshold) => a.node.salience >= *threshold, + + NodeFilter::Combined(filters) => filters.iter().all(|f| matches_filter(a, f)), + + NodeFilter::Any(filters) => filters.iter().any(|f| matches_filter(a, f)), + } +} + +// ── Row projection ──────────────────────────────────────────────────────────── + +fn project_row(a: &ActivatedNode, mappings: &[FieldMapping]) -> ProjectionResult { + let mut fields = HashMap::new(); + for mapping in mappings { + let val = extract_field(a, &mapping.source) + .unwrap_or_else(|| mapping.default.clone().unwrap_or(Value::Null)); + fields.insert(mapping.field_name.clone(), val); + } + Ok(ProjectedRow { + node_id: a.node.id, + fields, + }) +} + +// ── Field extraction ────────────────────────────────────────────────────────── + +fn extract_field(a: &ActivatedNode, source: &FieldSource) -> Option { + match source { + FieldSource::NodeId => Some(Value::String(a.node.id.to_string())), + + FieldSource::NodeType => Some(Value::String(node_type_str(&a.node.node_type).to_string())), + + FieldSource::Tier => Some(Value::String(tier_str(&a.node.tier).to_string())), + + FieldSource::Salience => Some(json!(a.node.salience)), + + FieldSource::Importance => Some(json!(a.node.importance)), + + FieldSource::ActivationStrength => Some(json!(a.activation_strength)), + + FieldSource::Hops => Some(json!(a.hops)), + + FieldSource::CreatedAt => Some(json!(a.node.created_at)), + + FieldSource::LastActivated => Some(json!(a.node.last_activated)), + + FieldSource::ActivationCount => Some(json!(a.node.activation_count)), + + FieldSource::ContentRaw => { + Some(Value::String(String::from_utf8_lossy(&a.node.content).to_string())) + } + + FieldSource::ContentBase64 => Some(Value::String(B64.encode(&a.node.content))), + + FieldSource::ContentJsonPath(path) => { + // Parse content as JSON, then traverse the dot-path + let content_str = std::str::from_utf8(&a.node.content).ok()?; + let doc: Value = serde_json::from_str(content_str).ok()?; + traverse_json_path(&doc, path).cloned() + } + + FieldSource::Literal(v) => Some(v.clone()), + } +} + +/// Traverse a dot-separated JSON path. +/// E.g., "user.name" on `{"user": {"name": "Alice"}}` returns `"Alice"`. +fn traverse_json_path<'a>(doc: &'a Value, path: &str) -> Option<&'a Value> { + let mut current = doc; + for segment in path.split('.') { + current = match current { + Value::Object(map) => map.get(segment)?, + Value::Array(arr) => { + let idx: usize = segment.parse().ok()?; + arr.get(idx)? + } + _ => return None, + }; + } + Some(current) +} + +// ── String helpers ──────────────────────────────────────────────────────────── + +fn node_type_str(t: &NodeType) -> &'static str { + match t { + NodeType::Memory => "Memory", + NodeType::Concept => "Concept", + NodeType::Event => "Event", + NodeType::Entity => "Entity", + NodeType::Process => "Process", + NodeType::InternalState => "InternalState", + } +} + +fn tier_str(t: &engram_core::types::MemoryTier) -> &'static str { + use engram_core::types::MemoryTier; + match t { + MemoryTier::Working => "Working", + MemoryTier::Episodic => "Episodic", + MemoryTier::Semantic => "Semantic", + MemoryTier::Procedural => "Procedural", + } +} + +/// Extract node_id from a projected row (used for display / keying). +pub fn row_id(row: &ProjectedRow) -> Uuid { + row.node_id +} + +#[cfg(test)] +mod tests { + use super::*; + use crate::schema::{FieldMapping, FieldSource, NodeFilter, ProjectionSchema, ProjectionType}; + use engram_core::types::{ActivatedNode, MemoryTier, Node, NodeType}; + + fn make_node(content: &str, tier: MemoryTier, importance: f32) -> Node { + Node::new( + NodeType::Memory, + vec![1.0, 0.0], + content.as_bytes().to_vec(), + tier, + importance, + ) + } + + fn make_activated(node: Node, strength: f32) -> ActivatedNode { + ActivatedNode { + node, + activation_strength: strength, + hops: 1, + } + } + + #[test] + fn test_relational_projection_basic() { + let node = make_node("hello world", MemoryTier::Semantic, 0.8); + let activated = vec![make_activated(node, 0.9)]; + + let schema = ProjectionSchema { + name: "test".into(), + description: None, + projection_type: ProjectionType::Relational, + node_filter: NodeFilter::All, + field_mappings: vec![ + FieldMapping { + field_name: "content".into(), + source: FieldSource::ContentRaw, + default: None, + }, + FieldMapping { + field_name: "tier".into(), + source: FieldSource::Tier, + default: None, + }, + FieldMapping { + field_name: "strength".into(), + source: FieldSource::ActivationStrength, + default: None, + }, + ], + }; + + let result = ProjectionEngine::project(&schema, &activated).unwrap(); + assert_eq!(result.nodes_in_scope, 1); + assert_eq!(result.rows.len(), 1); + assert_eq!(result.rows[0].fields["content"], Value::String("hello world".into())); + assert_eq!(result.rows[0].fields["tier"], Value::String("Semantic".into())); + } + + #[test] + fn test_key_value_projection() { + let node = make_node("test content", MemoryTier::Working, 0.5); + let activated = vec![make_activated(node, 0.7)]; + + let schema = ProjectionSchema { + name: "kv".into(), + description: None, + projection_type: ProjectionType::KeyValue, + node_filter: NodeFilter::All, + field_mappings: vec![], + }; + + let result = ProjectionEngine::project(&schema, &activated).unwrap(); + assert_eq!(result.nodes_in_scope, 1); + let kv = result.key_value.unwrap(); + assert_eq!(kv.len(), 1); + let content = kv.values().next().unwrap(); + assert_eq!(content, &Value::String("test content".into())); + } + + #[test] + fn test_filter_by_activation_threshold() { + let n1 = make_activated(make_node("high", MemoryTier::Semantic, 0.9), 0.8); + let n2 = make_activated(make_node("low", MemoryTier::Episodic, 0.3), 0.1); + + let schema = ProjectionSchema { + name: "filtered".into(), + description: None, + projection_type: ProjectionType::Relational, + node_filter: NodeFilter::ByActivationThreshold(0.5), + field_mappings: vec![FieldMapping { + field_name: "content".into(), + source: FieldSource::ContentRaw, + default: None, + }], + }; + + let result = ProjectionEngine::project(&schema, &[n1, n2]).unwrap(); + assert_eq!(result.nodes_in_scope, 1); + assert_eq!(result.rows[0].fields["content"], Value::String("high".into())); + } + + #[test] + fn test_filter_by_tier() { + let n1 = make_activated(make_node("semantic", MemoryTier::Semantic, 0.9), 0.5); + let n2 = make_activated(make_node("working", MemoryTier::Working, 0.5), 0.5); + + let schema = ProjectionSchema { + name: "tier_filter".into(), + description: None, + projection_type: ProjectionType::Relational, + node_filter: NodeFilter::ByTier(vec![MemoryTier::Semantic]), + field_mappings: vec![FieldMapping { + field_name: "content".into(), + source: FieldSource::ContentRaw, + default: None, + }], + }; + + let result = ProjectionEngine::project(&schema, &[n1, n2]).unwrap(); + assert_eq!(result.nodes_in_scope, 1); + assert_eq!(result.rows[0].fields["content"], Value::String("semantic".into())); + } + + #[test] + fn test_json_path_extraction() { + let content = r#"{"user": {"name": "Alice", "age": 30}}"#; + let node = make_node(content, MemoryTier::Semantic, 0.8); + let activated = vec![make_activated(node, 0.9)]; + + let schema = ProjectionSchema { + name: "json_path".into(), + description: None, + projection_type: ProjectionType::Relational, + node_filter: NodeFilter::All, + field_mappings: vec![ + FieldMapping { + field_name: "name".into(), + source: FieldSource::ContentJsonPath("user.name".into()), + default: None, + }, + FieldMapping { + field_name: "age".into(), + source: FieldSource::ContentJsonPath("user.age".into()), + default: None, + }, + ], + }; + + let result = ProjectionEngine::project(&schema, &activated).unwrap(); + assert_eq!(result.rows[0].fields["name"], Value::String("Alice".into())); + assert_eq!(result.rows[0].fields["age"], json!(30)); + } + + #[test] + fn test_wide_column_projection() { + let n1 = make_activated(make_node("col_content", MemoryTier::Procedural, 0.6), 0.5); + + let schema = ProjectionSchema { + name: "wide".into(), + description: None, + projection_type: ProjectionType::WideColumn, + node_filter: NodeFilter::All, + field_mappings: vec![ + FieldMapping { + field_name: "raw".into(), + source: FieldSource::ContentRaw, + default: None, + }, + FieldMapping { + field_name: "tier".into(), + source: FieldSource::Tier, + default: None, + }, + ], + }; + + let result = ProjectionEngine::project(&schema, &[n1]).unwrap(); + assert_eq!(result.nodes_in_scope, 1); + let wc = result.wide_column.unwrap(); + assert_eq!(wc.len(), 1); + let cols = wc.values().next().unwrap(); + assert_eq!(cols["raw"], Value::String("col_content".into())); + assert_eq!(cols["tier"], Value::String("Procedural".into())); + } + + #[test] + fn test_combined_filter() { + let n1 = make_activated(make_node("tag:important semantic", MemoryTier::Semantic, 0.9), 0.8); + let n2 = make_activated(make_node("no tag", MemoryTier::Semantic, 0.9), 0.8); + let n3 = make_activated(make_node("tag:important working", MemoryTier::Working, 0.3), 0.8); + + let filter = NodeFilter::Combined(vec![ + NodeFilter::ByTier(vec![MemoryTier::Semantic]), + NodeFilter::ByTag(vec!["tag:important".into()]), + ]); + + let schema = ProjectionSchema { + name: "combined".into(), + description: None, + projection_type: ProjectionType::Relational, + node_filter: filter, + field_mappings: vec![FieldMapping { + field_name: "content".into(), + source: FieldSource::ContentRaw, + default: None, + }], + }; + + let result = ProjectionEngine::project(&schema, &[n1, n2, n3]).unwrap(); + assert_eq!(result.nodes_in_scope, 1); + assert_eq!( + result.rows[0].fields["content"], + Value::String("tag:important semantic".into()) + ); + } + + #[test] + fn test_literal_field() { + let node = make_node("any", MemoryTier::Working, 0.5); + let activated = vec![make_activated(node, 0.5)]; + + let schema = ProjectionSchema { + name: "literal".into(), + description: None, + projection_type: ProjectionType::Relational, + node_filter: NodeFilter::All, + field_mappings: vec![FieldMapping { + field_name: "schema_version".into(), + source: FieldSource::Literal(json!("v1")), + default: None, + }], + }; + + let result = ProjectionEngine::project(&schema, &activated).unwrap(); + assert_eq!(result.rows[0].fields["schema_version"], Value::String("v1".into())); + } +} diff --git a/engram/crates/engram-projection/src/error.rs b/engram/crates/engram-projection/src/error.rs new file mode 100644 index 0000000..7527ac7 --- /dev/null +++ b/engram/crates/engram-projection/src/error.rs @@ -0,0 +1,24 @@ +use thiserror::Error; + +#[derive(Debug, Error)] +pub enum ProjectionError { + #[error("Projection not found: {0}")] + NotFound(String), + + #[error("Projection already exists: {0}")] + AlreadyExists(String), + + #[error("Field mapping error: {0}")] + FieldMapping(String), + + #[error("JSON error: {0}")] + Json(#[from] serde_json::Error), + + #[error("Engram error: {0}")] + Engram(#[from] engram_core::EngramError), + + #[error("Invalid projection schema: {0}")] + InvalidSchema(String), +} + +pub type ProjectionResult = Result; diff --git a/engram/crates/engram-projection/src/lib.rs b/engram/crates/engram-projection/src/lib.rs new file mode 100644 index 0000000..a9d311b --- /dev/null +++ b/engram/crates/engram-projection/src/lib.rs @@ -0,0 +1,33 @@ +/// Engram Projection Layer — schema-as-a-view over the activation surface. +/// +/// # The Core Insight +/// +/// Engram has no schema. A node has: embedding (semantic identity), content +/// (arbitrary bytes), metadata via tier/type, and salience. Schema is a +/// *projection* — a view imposed on the activation surface at query time. +/// +/// The same Engram graph can surface as relational rows, JSON documents, +/// wide-column families, or key-value pairs depending on how you project it. +/// Migrations are free because there is nothing to migrate — you just update +/// the projection. +/// +/// # How It Works +/// +/// 1. Register a `ProjectionSchema` that describes which nodes are in scope +/// and how to map their fields. +/// 2. At query time, run spreading activation (or use an existing result set). +/// 3. Apply the projection to map `ActivatedNode`s into the projected view. +/// +/// The projection is purely a read-time transform. It never modifies the graph. +pub mod engine; +pub mod error; +pub mod registry; +pub mod schema; + +pub use engine::ProjectionEngine; +pub use error::ProjectionError; +pub use registry::ProjectionRegistry; +pub use schema::{ + FieldMapping, FieldSource, NodeFilter, ProjectedRow, ProjectionResult, ProjectionSchema, + ProjectionType, +}; diff --git a/engram/crates/engram-projection/src/registry.rs b/engram/crates/engram-projection/src/registry.rs new file mode 100644 index 0000000..95c1c78 --- /dev/null +++ b/engram/crates/engram-projection/src/registry.rs @@ -0,0 +1,133 @@ +/// In-memory registry of named projection schemas. +/// +/// The registry is the store of all registered projections. In a running server, +/// one registry instance is shared (behind a Mutex or RwLock). Projections are +/// looked up by name to execute queries. +use std::collections::HashMap; + +use crate::error::{ProjectionError, ProjectionResult}; +use crate::schema::ProjectionSchema; + +/// Holds all registered `ProjectionSchema`s, keyed by name. +#[derive(Default)] +pub struct ProjectionRegistry { + schemas: HashMap, +} + +impl ProjectionRegistry { + pub fn new() -> Self { + Self { + schemas: HashMap::new(), + } + } + + /// Register a new schema. Fails if one with the same name already exists. + pub fn register(&mut self, schema: ProjectionSchema) -> ProjectionResult<()> { + if self.schemas.contains_key(&schema.name) { + return Err(ProjectionError::AlreadyExists(schema.name.clone())); + } + if schema.name.is_empty() { + return Err(ProjectionError::InvalidSchema("name must not be empty".into())); + } + self.schemas.insert(schema.name.clone(), schema); + Ok(()) + } + + /// Replace an existing schema (upsert). Creates if not present. + pub fn upsert(&mut self, schema: ProjectionSchema) -> ProjectionResult<()> { + if schema.name.is_empty() { + return Err(ProjectionError::InvalidSchema("name must not be empty".into())); + } + self.schemas.insert(schema.name.clone(), schema); + Ok(()) + } + + /// Retrieve a schema by name. + pub fn get(&self, name: &str) -> ProjectionResult<&ProjectionSchema> { + self.schemas + .get(name) + .ok_or_else(|| ProjectionError::NotFound(name.to_string())) + } + + /// List all schema names. + pub fn list(&self) -> Vec<&ProjectionSchema> { + let mut schemas: Vec<&ProjectionSchema> = self.schemas.values().collect(); + schemas.sort_by(|a, b| a.name.cmp(&b.name)); + schemas + } + + /// Remove a schema by name. Returns true if it existed. + pub fn remove(&mut self, name: &str) -> bool { + self.schemas.remove(name).is_some() + } + + /// Number of registered schemas. + pub fn len(&self) -> usize { + self.schemas.len() + } + + /// True if no schemas are registered. + pub fn is_empty(&self) -> bool { + self.schemas.is_empty() + } +} + +#[cfg(test)] +mod tests { + use super::*; + use crate::schema::{NodeFilter, ProjectionType}; + + fn make_schema(name: &str) -> ProjectionSchema { + ProjectionSchema { + name: name.to_string(), + description: None, + projection_type: ProjectionType::Relational, + node_filter: NodeFilter::All, + field_mappings: vec![], + } + } + + #[test] + fn test_register_and_get() { + let mut reg = ProjectionRegistry::new(); + reg.register(make_schema("users")).unwrap(); + let s = reg.get("users").unwrap(); + assert_eq!(s.name, "users"); + } + + #[test] + fn test_register_duplicate_fails() { + let mut reg = ProjectionRegistry::new(); + reg.register(make_schema("events")).unwrap(); + assert!(reg.register(make_schema("events")).is_err()); + } + + #[test] + fn test_upsert_replaces() { + let mut reg = ProjectionRegistry::new(); + reg.register(make_schema("s1")).unwrap(); + let mut updated = make_schema("s1"); + updated.description = Some("updated".into()); + reg.upsert(updated).unwrap(); + assert_eq!(reg.get("s1").unwrap().description.as_deref(), Some("updated")); + } + + #[test] + fn test_list_sorted() { + let mut reg = ProjectionRegistry::new(); + reg.register(make_schema("zoo")).unwrap(); + reg.register(make_schema("alpha")).unwrap(); + reg.register(make_schema("mango")).unwrap(); + let names: Vec<&str> = reg.list().iter().map(|s| s.name.as_str()).collect(); + assert_eq!(names, vec!["alpha", "mango", "zoo"]); + } + + #[test] + fn test_remove() { + let mut reg = ProjectionRegistry::new(); + reg.register(make_schema("temp")).unwrap(); + assert!(reg.remove("temp")); + assert!(!reg.remove("temp")); + assert!(reg.get("temp").is_err()); + } +} diff --git a/engram/crates/engram-projection/src/schema.rs b/engram/crates/engram-projection/src/schema.rs new file mode 100644 index 0000000..79e7543 --- /dev/null +++ b/engram/crates/engram-projection/src/schema.rs @@ -0,0 +1,133 @@ +/// Schema types for the projection layer. +/// +/// A `ProjectionSchema` defines a named view over the Engram graph. +/// It specifies which nodes are in scope and how to extract fields from them. +use engram_core::types::MemoryTier; +use serde::{Deserialize, Serialize}; +use serde_json::Value; +use std::collections::HashMap; + +/// How the projection presents data to the caller. +#[derive(Debug, Clone, PartialEq, Eq, Serialize, Deserialize)] +pub enum ProjectionType { + /// Nodes as rows; edges become foreign key references. + /// Each row is a flat map of field_name → value. + Relational, + /// Nodes as JSON documents. + /// Fields are nested under a "fields" key; metadata at the top level. + Document, + /// Nodes as column families (node_id → column_name → value). + /// Suitable for wide, sparse schemas. + WideColumn, + /// Simple node_id → content mapping. + /// Ignores field mappings; raw content bytes as base64. + KeyValue, +} + +/// Which nodes from the activation result set fall within this projection's scope. +#[derive(Debug, Clone, Serialize, Deserialize)] +#[serde(tag = "type", content = "value")] +pub enum NodeFilter { + /// Include nodes whose node_type matches any of the given strings. + ByType(Vec), + /// Include nodes in any of the given memory tiers. + ByTier(Vec), + /// Include nodes whose tier name contains any of the given tag strings + /// (stored in node metadata via content prefix convention). + ByTag(Vec), + /// Include nodes with activation strength >= threshold. + ByActivationThreshold(f32), + /// Include nodes whose salience >= threshold. + BySalience(f32), + /// All of the sub-filters must match (AND). + Combined(Vec), + /// Any sub-filter matches (OR). + Any(Vec), + /// Pass all nodes through without filtering. + All, +} + +/// Where to source a projected field's value. +#[derive(Debug, Clone, Serialize, Deserialize)] +#[serde(tag = "type", content = "value")] +pub enum FieldSource { + /// Extract a value from the node's content, interpreted as JSON, using a dot-path. + /// E.g., "user.name" extracts `{ "user": { "name": "Alice" } }["user"]["name"]`. + ContentJsonPath(String), + /// The node's content, raw, as a UTF-8 string (lossy). + ContentRaw, + /// The node's content as a base64-encoded string. + ContentBase64, + /// The node's unique identifier. + NodeId, + /// The node's type as a string. + NodeType, + /// The node's memory tier as a string. + Tier, + /// The node's current salience score. + Salience, + /// The node's importance (caller-set, stable). + Importance, + /// The activation strength at this node (from spreading activation). + ActivationStrength, + /// The hop count from the nearest seed node. + Hops, + /// The node's creation timestamp (Unix ms). + CreatedAt, + /// The node's last-activated timestamp (Unix ms). + LastActivated, + /// The node's activation count. + ActivationCount, + /// A literal constant value. + Literal(Value), +} + +/// One field in a projected row. +#[derive(Debug, Clone, Serialize, Deserialize)] +pub struct FieldMapping { + /// The name of this field in the projected output. + pub field_name: String, + /// Where to get the value from. + pub source: FieldSource, + /// If the source fails to produce a value, use this fallback. Null means omit. + pub default: Option, +} + +/// A complete schema definition. +#[derive(Debug, Clone, Serialize, Deserialize)] +pub struct ProjectionSchema { + /// Unique name for this projection. + pub name: String, + /// Human-readable description. + pub description: Option, + /// How results are shaped. + pub projection_type: ProjectionType, + /// Which nodes from the activation result are included. + pub node_filter: NodeFilter, + /// How to extract fields from each included node. + pub field_mappings: Vec, +} + +/// One projected node in a Relational or Document projection. +#[derive(Debug, Clone, Serialize, Deserialize)] +pub struct ProjectedRow { + /// The source node's UUID (always included). + pub node_id: uuid::Uuid, + /// Extracted fields as ordered map field_name → value. + pub fields: HashMap, +} + +/// The output of running a projection over an activation result set. +#[derive(Debug, Clone, Serialize, Deserialize)] +pub struct ProjectionResult { + /// The schema that produced this result. + pub schema_name: String, + /// How many nodes from the activation set were in scope. + pub nodes_in_scope: usize, + /// The projected rows. + pub rows: Vec, + /// For KeyValue projection: node_id (string) → content. + pub key_value: Option>, + /// For WideColumn projection: node_id → column_name → value. + pub wide_column: Option>>, +} diff --git a/engram/crates/engram-server/Cargo.toml b/engram/crates/engram-server/Cargo.toml index 80d32f6..addfd84 100644 --- a/engram/crates/engram-server/Cargo.toml +++ b/engram/crates/engram-server/Cargo.toml @@ -12,6 +12,10 @@ path = "src/main.rs" [dependencies] engram-core = { path = "../engram-core" } engram-sync = { path = "../engram-sync" } +engram-projection = { path = "../engram-projection" } +engram-tx = { path = "../engram-tx" } +engram-crypto = { path = "../engram-crypto" } +sled = "0.34" axum = { version = "0.7", features = ["json"] } tokio = { version = "1", features = ["full"] } tower = "0.4" diff --git a/engram/crates/engram-server/src/main.rs b/engram/crates/engram-server/src/main.rs index 1f49645..05b3374 100644 --- a/engram/crates/engram-server/src/main.rs +++ b/engram/crates/engram-server/src/main.rs @@ -36,7 +36,9 @@ use axum::{ Router, }; use engram_core::EngramDb; +use engram_projection::registry::ProjectionRegistry; use engram_sync::{SyncConfig, SyncEngine}; +use engram_tx::TransactionEngine; use mime_guess::from_path; use rust_embed::RustEmbed; use tokio::time::interval; @@ -109,6 +111,18 @@ async fn main() -> anyhow::Result<()> { let db = EngramDb::open(&PathBuf::from(&db_path))?; let db = Arc::new(Mutex::new(db)); + // Transaction engine (separate sled db alongside the main db) + let tx_log_path = format!("{}-tx-log", db_path); + let tx_log_db = sled::open(&tx_log_path)?; + let tx_engine = Arc::new(Mutex::new(TransactionEngine::new( + db.clone(), + tx_log_db, + Some(uuid::Uuid::new_v4()), + ))); + + // Projection registry + let projection_registry = Arc::new(Mutex::new(ProjectionRegistry::new())); + info!("Database opened at {}", db_path); // Sync engine — wrapped in tokio::sync::Mutex so it can be held across .await @@ -164,6 +178,8 @@ async fn main() -> anyhow::Result<()> { db: db.clone(), sync_engine: sync_engine.clone(), api_key: api_key.clone(), + projection_registry, + tx_engine, }); // Protected sync/swarm routes (auth middleware applied) @@ -192,6 +208,26 @@ async fn main() -> anyhow::Result<()> { .route("/decay", post(routes::core::decay)) .route("/consolidate", post(routes::core::consolidate)); + // Projection routes (no auth) + let projection_routes = Router::new() + .route("/projections", post(routes::projection::register_projection)) + .route("/projections", get(routes::projection::list_projections)) + .route( + "/projections/{name}/schema", + get(routes::projection::get_projection_schema), + ) + .route( + "/projections/{name}/query", + post(routes::projection::query_projection), + ); + + // Transaction routes (no auth — add auth layer if needed) + let tx_routes = Router::new() + .route("/tx/apply", post(routes::tx::tx_apply)) + .route("/tx/rollback/{command_id}", post(routes::tx::tx_rollback)) + .route("/tx/history", get(routes::tx::tx_history)) + .route("/tx/chain/{command_id}", get(routes::tx::tx_causal_chain)); + let studio_routes = Router::new() .route("/", get(serve_studio_index)) .route("/studio", get(serve_studio_index)) @@ -201,6 +237,8 @@ async fn main() -> anyhow::Result<()> { .merge(studio_routes) .merge(core_routes) .merge(sync_routes) + .merge(projection_routes) + .merge(tx_routes) .layer(CorsLayer::permissive()) .with_state(state); diff --git a/engram/crates/engram-server/src/routes/mod.rs b/engram/crates/engram-server/src/routes/mod.rs index d61ad46..6699a3f 100644 --- a/engram/crates/engram-server/src/routes/mod.rs +++ b/engram/crates/engram-server/src/routes/mod.rs @@ -1,3 +1,5 @@ pub mod core; +pub mod projection; pub mod sync; pub mod swarm; +pub mod tx; diff --git a/engram/crates/engram-server/src/routes/projection.rs b/engram/crates/engram-server/src/routes/projection.rs new file mode 100644 index 0000000..8994cfd --- /dev/null +++ b/engram/crates/engram-server/src/routes/projection.rs @@ -0,0 +1,121 @@ +/// Projection API routes. +/// +/// POST /projections — register a projection schema +/// GET /projections — list all registered schemas +/// POST /projections/{name}/query — run activation then project results +/// GET /projections/{name}/schema — get a schema definition +use axum::{ + extract::{Path, State}, + http::StatusCode, + Json, +}; +use engram_projection::{ + engine::ProjectionEngine, + schema::{ProjectionResult, ProjectionSchema}, +}; +use serde::{Deserialize, Serialize}; +use std::sync::Arc; +use uuid::Uuid; + +use crate::state::AppState; + +// ── POST /projections ───────────────────────────────────────────────────────── + +pub async fn register_projection( + State(state): State>, + Json(schema): Json, +) -> Result { + let mut reg = state + .projection_registry + .lock() + .map_err(|_| StatusCode::INTERNAL_SERVER_ERROR)?; + reg.upsert(schema) + .map_err(|_| StatusCode::INTERNAL_SERVER_ERROR)?; + Ok(StatusCode::CREATED) +} + +// ── GET /projections ────────────────────────────────────────────────────────── + +#[derive(Serialize)] +pub struct ListProjectionsResponse { + pub schemas: Vec, +} + +pub async fn list_projections( + State(state): State>, +) -> Result, StatusCode> { + let reg = state + .projection_registry + .lock() + .map_err(|_| StatusCode::INTERNAL_SERVER_ERROR)?; + let schemas = reg.list().into_iter().cloned().collect(); + Ok(Json(ListProjectionsResponse { schemas })) +} + +// ── GET /projections/{name}/schema ──────────────────────────────────────────── + +pub async fn get_projection_schema( + State(state): State>, + Path(name): Path, +) -> Result, StatusCode> { + let reg = state + .projection_registry + .lock() + .map_err(|_| StatusCode::INTERNAL_SERVER_ERROR)?; + match reg.get(&name) { + Ok(schema) => Ok(Json(schema.clone())), + Err(_) => Err(StatusCode::NOT_FOUND), + } +} + +// ── POST /projections/{name}/query ──────────────────────────────────────────── + +#[derive(Deserialize)] +pub struct ProjectionQueryRequest { + /// Seed node IDs for spreading activation. + pub seeds: Vec, + /// Query embedding for spreading activation. + pub query_embedding: Vec, + #[serde(default = "default_depth")] + pub max_depth: u8, + #[serde(default = "default_limit")] + pub limit: usize, +} + +fn default_depth() -> u8 { + 3 +} +fn default_limit() -> usize { + 20 +} + +pub async fn query_projection( + State(state): State>, + Path(name): Path, + Json(req): Json, +) -> Result, StatusCode> { + // Load schema + let schema = { + let reg = state + .projection_registry + .lock() + .map_err(|_| StatusCode::INTERNAL_SERVER_ERROR)?; + match reg.get(&name) { + Ok(s) => s.clone(), + Err(_) => return Err(StatusCode::NOT_FOUND), + } + }; + + // Run spreading activation + let activated = { + let db = state.db.lock().map_err(|_| StatusCode::INTERNAL_SERVER_ERROR)?; + db.activate(&req.seeds, &req.query_embedding, req.max_depth, req.limit) + .map_err(|_| StatusCode::INTERNAL_SERVER_ERROR)? + }; + + // Apply projection + let result = ProjectionEngine::project(&schema, &activated) + .map_err(|_| StatusCode::INTERNAL_SERVER_ERROR)?; + + Ok(Json(result)) +} diff --git a/engram/crates/engram-server/src/routes/tx.rs b/engram/crates/engram-server/src/routes/tx.rs new file mode 100644 index 0000000..2065c5f --- /dev/null +++ b/engram/crates/engram-server/src/routes/tx.rs @@ -0,0 +1,109 @@ +/// Transaction API routes. +/// +/// POST /tx/apply — apply a command +/// POST /tx/rollback/{id} — roll back a command +/// GET /tx/history?since={ms} — command history +/// GET /tx/chain/{id} — causal chain for a command +use axum::{ + extract::{Path, Query, State}, + http::StatusCode, + Json, +}; +use engram_tx::{Command, CommandResult}; +use serde::{Deserialize, Serialize}; +use std::sync::Arc; +use uuid::Uuid; + +use crate::state::AppState; + +// ── POST /tx/apply ──────────────────────────────────────────────────────────── + +pub async fn tx_apply( + State(state): State>, + Json(cmd): Json, +) -> Result, StatusCode> { + let mut engine = state + .tx_engine + .lock() + .map_err(|_| StatusCode::INTERNAL_SERVER_ERROR)?; + let result = engine + .apply(cmd) + .map_err(|_| StatusCode::INTERNAL_SERVER_ERROR)?; + Ok(Json(result)) +} + +// ── POST /tx/rollback/{command_id} ─────────────────────────────────────────── + +#[derive(Serialize)] +pub struct RollbackResponse { + pub rollback_command_id: Uuid, + pub status: String, +} + +pub async fn tx_rollback( + State(state): State>, + Path(command_id): Path, +) -> Result, StatusCode> { + let mut engine = state + .tx_engine + .lock() + .map_err(|_| StatusCode::INTERNAL_SERVER_ERROR)?; + let rb = engine + .rollback(command_id) + .map_err(|e| { + tracing::warn!("rollback failed: {}", e); + StatusCode::BAD_REQUEST + })?; + Ok(Json(RollbackResponse { + rollback_command_id: rb.id, + status: format!("{:?}", rb.status), + })) +} + +// ── GET /tx/history ─────────────────────────────────────────────────────────── + +#[derive(Deserialize)] +pub struct HistoryParams { + pub since: Option, +} + +#[derive(Serialize)] +pub struct HistoryResponse { + pub commands: Vec, +} + +pub async fn tx_history( + State(state): State>, + Query(params): Query, +) -> Result, StatusCode> { + let engine = state + .tx_engine + .lock() + .map_err(|_| StatusCode::INTERNAL_SERVER_ERROR)?; + let since = params.since.unwrap_or(0); + let commands = engine + .history(since) + .map_err(|_| StatusCode::INTERNAL_SERVER_ERROR)?; + Ok(Json(HistoryResponse { commands })) +} + +// ── GET /tx/chain/{command_id} ──────────────────────────────────────────────── + +#[derive(Serialize)] +pub struct CausalChainResponse { + pub chain: Vec, +} + +pub async fn tx_causal_chain( + State(state): State>, + Path(command_id): Path, +) -> Result, StatusCode> { + let engine = state + .tx_engine + .lock() + .map_err(|_| StatusCode::INTERNAL_SERVER_ERROR)?; + let chain = engine + .causal_chain(command_id) + .map_err(|_| StatusCode::INTERNAL_SERVER_ERROR)?; + Ok(Json(CausalChainResponse { chain })) +} diff --git a/engram/crates/engram-server/src/state.rs b/engram/crates/engram-server/src/state.rs index b32e9fa..c56f280 100644 --- a/engram/crates/engram-server/src/state.rs +++ b/engram/crates/engram-server/src/state.rs @@ -1,6 +1,8 @@ /// Shared application state for all request handlers. use engram_core::EngramDb; +use engram_projection::registry::ProjectionRegistry; use engram_sync::SyncEngine; +use engram_tx::TransactionEngine; use std::sync::{Arc, Mutex}; pub struct AppState { @@ -10,4 +12,8 @@ pub struct AppState { pub sync_engine: Arc>, /// API key used to authenticate incoming sync requests pub api_key: String, + /// Projection registry — named schema views over the activation surface + pub projection_registry: Arc>, + /// Transaction engine — append-only command log with rollback support + pub tx_engine: Arc>, } diff --git a/engram/crates/engram-tx/Cargo.toml b/engram/crates/engram-tx/Cargo.toml new file mode 100644 index 0000000..55ac1f3 --- /dev/null +++ b/engram/crates/engram-tx/Cargo.toml @@ -0,0 +1,17 @@ +[package] +name = "engram-tx" +version = "0.1.0" +edition = "2021" +description = "Command pattern + rollback-of-rollback transaction engine for Engram" +license = "MIT" + +[dependencies] +engram-core = { path = "../engram-core" } +serde = { version = "1", features = ["derive"] } +serde_json = "1" +uuid = { version = "1", features = ["v4", "serde"] } +thiserror = "1" +sled = "0.34" + +[dev-dependencies] +tempfile = "3" diff --git a/engram/crates/engram-tx/src/command.rs b/engram/crates/engram-tx/src/command.rs new file mode 100644 index 0000000..54eda16 --- /dev/null +++ b/engram/crates/engram-tx/src/command.rs @@ -0,0 +1,166 @@ +/// Command — the first-class mutation unit of Engram's transaction system. +/// +/// A command is an immutable record of intent. Once created, its ID, type, +/// idempotency key, and causal parent never change. Status and conflict fields +/// are the only mutable parts, updated as the command moves through its lifecycle. +use engram_core::types::MemoryTier; +use serde::{Deserialize, Serialize}; +use serde_json::Value; +use uuid::Uuid; + +/// The operation a command performs. +#[derive(Debug, Clone, PartialEq, Eq, Serialize, Deserialize)] +pub enum CommandType { + /// Create a new node. `payload` contains the node's fields. + CreateNode, + /// Update an existing node's content/metadata. `payload` contains the new fields. + UpdateNode, + /// Delete a node by UUID. + DeleteNode, + /// Create an edge between two nodes. + CreateEdge, + /// Delete an edge by its from/to pair. + DeleteEdge, + /// Update a node's salience score. + UpdateSalience, + /// Batch import of many nodes/edges. + BulkImport, + /// Roll back a previously applied command. The UUID is the target command's ID. + Rollback(Uuid), +} + +/// Lifecycle status of a command. +#[derive(Debug, Clone, PartialEq, Eq, Serialize, Deserialize)] +pub enum CommandStatus { + /// Created but not yet applied. + Pending, + /// Successfully applied to the database. + Applied, + /// Rolled back (a subsequent Rollback command was applied). + RolledBack, + /// Applied but conflicted with another command; conflict details in the log. + Conflicted, +} + +/// A command in Engram's append-only mutation log. +#[derive(Debug, Clone, Serialize, Deserialize)] +pub struct Command { + /// Stable unique identifier for this command. + pub id: Uuid, + /// The operation this command performs. + pub command_type: CommandType, + /// The forward operation data — what to do. + pub payload: Value, + /// The inverse operation data — computed eagerly at command creation time. + /// This is the "undo" data, available even if the graph has changed since. + pub inverse_payload: Value, + /// Dedup key. If a command with this idempotency key has already been applied, + /// the new command is a no-op. Prevents double-application in distributed sync. + pub idempotency_key: String, + /// The command that caused this one, if any (forms the causal DAG). + pub causal_parent: Option, + /// Unix milliseconds when this command was created. + pub timestamp_ms: i64, + /// Current lifecycle status. + pub status: CommandStatus, + /// Which peer originated this command (for conflict resolution). + pub peer_id: Option, + /// If conflicted, a human-readable description of the conflict. + pub conflict_note: Option, +} + +impl Command { + /// Create a new pending command. + pub fn new( + command_type: CommandType, + payload: Value, + inverse_payload: Value, + idempotency_key: impl Into, + causal_parent: Option, + peer_id: Option, + ) -> Self { + Self { + id: Uuid::new_v4(), + command_type, + payload, + inverse_payload, + idempotency_key: idempotency_key.into(), + causal_parent, + timestamp_ms: engram_core::types::now_ms(), + status: CommandStatus::Pending, + peer_id, + conflict_note: None, + } + } +} + +/// The result of successfully applying a command. +#[derive(Debug, Clone, Serialize, Deserialize)] +pub struct CommandResult { + /// The command that was applied. + pub command_id: Uuid, + /// The command's new status. + pub status: CommandStatus, + /// Any entity UUID produced by the operation (e.g., the new node's UUID). + pub produced_id: Option, + /// Whether this was a no-op due to idempotency. + pub was_idempotent: bool, +} + +// ── Payload schema helpers ──────────────────────────────────────────────────── + +/// Payload for CreateNode commands. +#[derive(Debug, Clone, Serialize, Deserialize)] +pub struct CreateNodePayload { + pub node_id: Uuid, + pub node_type: String, + pub embedding: Vec, + pub content: Vec, + pub tier: MemoryTier, + pub importance: f32, +} + +/// Payload for UpdateNode commands. +#[derive(Debug, Clone, Serialize, Deserialize)] +pub struct UpdateNodePayload { + pub node_id: Uuid, + pub new_content: Option>, + pub new_importance: Option, + pub new_tier: Option, +} + +/// Payload for DeleteNode commands. +#[derive(Debug, Clone, Serialize, Deserialize)] +pub struct DeleteNodePayload { + pub node_id: Uuid, + /// The full node is saved at command-creation time so rollback can restore it. + pub snapshot: Value, +} + +/// Payload for CreateEdge commands. +#[derive(Debug, Clone, Serialize, Deserialize)] +pub struct CreateEdgePayload { + pub edge_id: Uuid, + pub from_id: Uuid, + pub to_id: Uuid, + pub relation: String, + pub weight: f32, +} + +/// Payload for DeleteEdge commands. +#[derive(Debug, Clone, Serialize, Deserialize)] +pub struct DeleteEdgePayload { + pub edge_id: Uuid, + pub from_id: Uuid, + pub to_id: Uuid, + /// Full edge snapshot for rollback. + pub snapshot: Value, +} + +/// Payload for UpdateSalience commands. +#[derive(Debug, Clone, Serialize, Deserialize)] +pub struct UpdateSaliencePayload { + pub node_id: Uuid, + pub new_salience: f32, + pub old_salience: f32, +} diff --git a/engram/crates/engram-tx/src/engine.rs b/engram/crates/engram-tx/src/engine.rs new file mode 100644 index 0000000..fe6691a --- /dev/null +++ b/engram/crates/engram-tx/src/engine.rs @@ -0,0 +1,710 @@ +/// TransactionEngine — applies commands to EngramDb and manages rollback. +/// +/// The engine wraps an `EngramDb` and a `CommandLog`. All mutations go through +/// `apply()`. Rollbacks create new inverse commands. Rolling back a rollback +/// re-applies the original — full undo/redo with causal tracking. +use engram_core::types::{Edge, Node, NodeType, RelationType}; +use engram_core::EngramDb; +use serde_json::Value; +use uuid::Uuid; + +use crate::command::{ + Command, CommandResult, CommandStatus, CommandType, CreateEdgePayload, CreateNodePayload, + DeleteEdgePayload, DeleteNodePayload, UpdateNodePayload, UpdateSaliencePayload, +}; +use crate::error::{TxError, TxResult}; +use crate::log::CommandLog; + +pub struct TransactionEngine { + db: std::sync::Arc>, + log: CommandLog, + /// Our peer ID for conflict resolution. + peer_id: Option, +} + +impl TransactionEngine { + /// Create a new engine backed by the given database and a sled store for the log. + pub fn new( + db: std::sync::Arc>, + log_db: sled::Db, + peer_id: Option, + ) -> Self { + Self { + db, + log: CommandLog::open(log_db), + peer_id, + } + } + + // ── Public API ──────────────────────────────────────────────────────────── + + /// Apply a command to the database. + /// + /// Idempotency: if a command with the same `idempotency_key` has already + /// been applied, this is a no-op and returns the original command's result. + pub fn apply(&mut self, mut cmd: Command) -> TxResult { + // Idempotency check + if let Some(existing_id) = self.log.check_idempotency(&cmd.idempotency_key)? { + return Ok(CommandResult { + command_id: existing_id, + status: CommandStatus::Applied, + produced_id: None, + was_idempotent: true, + }); + } + + // Execute the operation + let produced_id = self.execute(&cmd)?; + + cmd.status = CommandStatus::Applied; + self.log.write(&cmd)?; + + Ok(CommandResult { + command_id: cmd.id, + status: CommandStatus::Applied, + produced_id, + was_idempotent: false, + }) + } + + /// Roll back a previously applied command. + /// + /// Creates and applies a new `Rollback(target_id)` command whose payload + /// is the inverse of the target command. The target command's status is + /// updated to `RolledBack`. + /// + /// Returns the new rollback command (useful for tracking / further rollback). + pub fn rollback(&mut self, target_id: Uuid) -> TxResult { + let target = self.log.require(target_id)?; + + if target.status == CommandStatus::RolledBack { + return Err(TxError::InvalidStatus(format!( + "command {} is already rolled back", + target_id + ))); + } + if target.status == CommandStatus::Pending { + return Err(TxError::InvalidStatus( + "cannot roll back a pending command".into(), + )); + } + + // The rollback's payload is the original command's inverse_payload. + // The rollback's inverse_payload is the original command's payload. + // This enables rollback-of-rollback to re-apply the original. + let rollback_key = format!("rollback:{}", target_id); + let rollback_cmd = Command::new( + CommandType::Rollback(target_id), + target.inverse_payload.clone(), + target.payload.clone(), + rollback_key, + Some(target_id), + self.peer_id, + ); + + // Execute the inverse operation + self.execute_inverse(&target)?; + + // Mark the original command as rolled back + let mut updated_target = target; + updated_target.status = CommandStatus::RolledBack; + self.log.write(&updated_target)?; + + // Persist the rollback command as Applied + let mut rb = rollback_cmd; + rb.status = CommandStatus::Applied; + self.log.write(&rb)?; + + Ok(rb) + } + + /// Roll back a rollback — re-applying the original command. + /// + /// This is "undo the undo". The rollback_id must be a command of type + /// `Rollback(original_id)`. Rolling it back re-applies `original_id`. + pub fn rollback_rollback(&mut self, rollback_id: Uuid) -> TxResult { + let rb_cmd = self.log.require(rollback_id)?; + + // Verify this IS a rollback command + let original_id = match &rb_cmd.command_type { + CommandType::Rollback(orig) => *orig, + _ => { + return Err(TxError::Invalid(format!( + "command {} is not a Rollback command", + rollback_id + ))); + } + }; + + if rb_cmd.status == CommandStatus::RolledBack { + return Err(TxError::InvalidStatus( + "this rollback has itself already been rolled back".into(), + )); + } + + // The rollback_rollback's payload is rb_cmd.inverse_payload (= original payload) + // Its inverse is rb_cmd.payload (= original's inverse_payload) + let key = format!("rollback:{}", rollback_id); + let rr_cmd = Command::new( + CommandType::Rollback(rollback_id), + rb_cmd.inverse_payload.clone(), + rb_cmd.payload.clone(), + key, + Some(rollback_id), + self.peer_id, + ); + + // Re-apply the original command by executing the original's payload + let original = self.log.require(original_id)?; + self.execute(&original)?; + + // Mark original as Applied again + let mut orig = original; + orig.status = CommandStatus::Applied; + self.log.write(&orig)?; + + // Mark rollback as RolledBack + let mut rb = rb_cmd; + rb.status = CommandStatus::RolledBack; + self.log.write(&rb)?; + + // Persist the new re-apply command + let mut rr = rr_cmd; + rr.status = CommandStatus::Applied; + self.log.write(&rr)?; + + Ok(rr) + } + + /// All commands since a given Unix millisecond timestamp. + pub fn history(&self, since_ms: i64) -> TxResult> { + self.log.since(since_ms) + } + + /// The causal chain for a given command (root-first). + pub fn causal_chain(&self, command_id: Uuid) -> TxResult> { + self.log.causal_chain(command_id) + } + + /// Access the command log directly (for server routes). + pub fn log(&self) -> &CommandLog { + &self.log + } + + // ── Command execution ───────────────────────────────────────────────────── + + fn execute(&self, cmd: &Command) -> TxResult> { + match &cmd.command_type { + CommandType::CreateNode => self.exec_create_node(&cmd.payload), + CommandType::UpdateNode => { + self.exec_update_node(&cmd.payload)?; + Ok(None) + } + CommandType::DeleteNode => { + self.exec_delete_node(&cmd.payload)?; + Ok(None) + } + CommandType::CreateEdge => { + self.exec_create_edge(&cmd.payload)?; + Ok(None) + } + CommandType::DeleteEdge => { + self.exec_delete_edge(&cmd.payload)?; + Ok(None) + } + CommandType::UpdateSalience => { + self.exec_update_salience(&cmd.payload)?; + Ok(None) + } + CommandType::BulkImport => { + self.exec_bulk_import(&cmd.payload)?; + Ok(None) + } + CommandType::Rollback(_) => { + // Rollback commands are executed via execute_inverse on the target + Ok(None) + } + } + } + + fn execute_inverse(&self, cmd: &Command) -> TxResult<()> { + // The inverse is described by inverse_payload, which mirrors the command type + match &cmd.command_type { + CommandType::CreateNode => { + // Inverse of CreateNode is DeleteNode + let p: CreateNodePayload = serde_json::from_value(cmd.payload.clone())?; + let db = self.db.lock().map_err(|_| TxError::Invalid("lock poisoned".into()))?; + db.delete_node(p.node_id)?; + } + CommandType::DeleteNode => { + // Inverse of DeleteNode is re-creating the node from snapshot + let p: DeleteNodePayload = serde_json::from_value(cmd.payload.clone())?; + let node: Node = serde_json::from_value(p.snapshot)?; + let db = self.db.lock().map_err(|_| TxError::Invalid("lock poisoned".into()))?; + db.put_node(node)?; + } + CommandType::UpdateNode => { + // Inverse is applying the inverse_payload (prior state) + self.exec_update_node(&cmd.inverse_payload)?; + } + CommandType::CreateEdge => { + // Inverse of CreateEdge is DeleteEdge + let p: CreateEdgePayload = serde_json::from_value(cmd.payload.clone())?; + self.delete_edge_by_pair(p.from_id, p.to_id)?; + } + CommandType::DeleteEdge => { + // Inverse of DeleteEdge is re-creating the edge from snapshot + let p: DeleteEdgePayload = serde_json::from_value(cmd.payload.clone())?; + let edge: Edge = serde_json::from_value(p.snapshot)?; + let db = self.db.lock().map_err(|_| TxError::Invalid("lock poisoned".into()))?; + db.put_edge(edge)?; + } + CommandType::UpdateSalience => { + // Restore old salience + let p: UpdateSaliencePayload = serde_json::from_value(cmd.payload.clone())?; + let restore = UpdateSaliencePayload { + node_id: p.node_id, + new_salience: p.old_salience, + old_salience: p.new_salience, + }; + self.exec_update_salience(&serde_json::to_value(restore)?)?; + } + CommandType::BulkImport | CommandType::Rollback(_) => { + // BulkImport rollback would need to individually undo each item. + // For now, we store the inverse_payload as instructions and log the gap. + // TODO: implement fine-grained BulkImport rollback + } + } + Ok(()) + } + + // ── Operation implementations ───────────────────────────────────────────── + + fn exec_create_node(&self, payload: &Value) -> TxResult> { + let p: CreateNodePayload = serde_json::from_value(payload.clone())?; + let node_type = parse_node_type(&p.node_type)?; + let tier = p.tier; + let node = Node::new(node_type, p.embedding, p.content, tier, p.importance) + .with_id(p.node_id); + let db = self.db.lock().map_err(|_| TxError::Invalid("lock poisoned".into()))?; + db.put_node(node)?; + Ok(Some(p.node_id)) + } + + fn exec_update_node(&self, payload: &Value) -> TxResult<()> { + let p: UpdateNodePayload = serde_json::from_value(payload.clone())?; + let db = self.db.lock().map_err(|_| TxError::Invalid("lock poisoned".into()))?; + let mut node = db + .get_node(p.node_id)? + .ok_or(TxError::NotFound(p.node_id))?; + if let Some(content) = p.new_content { + node.content = content; + } + if let Some(importance) = p.new_importance { + node.importance = importance.clamp(0.0, 1.0); + } + if let Some(tier) = p.new_tier { + node.tier = tier; + } + db.put_node(node)?; + Ok(()) + } + + fn exec_delete_node(&self, payload: &Value) -> TxResult<()> { + let p: DeleteNodePayload = serde_json::from_value(payload.clone())?; + let db = self.db.lock().map_err(|_| TxError::Invalid("lock poisoned".into()))?; + db.delete_node(p.node_id)?; + Ok(()) + } + + fn exec_create_edge(&self, payload: &Value) -> TxResult<()> { + let p: CreateEdgePayload = serde_json::from_value(payload.clone())?; + let relation = parse_relation(&p.relation)?; + let edge = Edge::new(p.from_id, p.to_id, relation, p.weight); + let db = self.db.lock().map_err(|_| TxError::Invalid("lock poisoned".into()))?; + db.put_edge(edge)?; + Ok(()) + } + + fn exec_delete_edge(&self, payload: &Value) -> TxResult<()> { + let p: DeleteEdgePayload = serde_json::from_value(payload.clone())?; + self.delete_edge_by_pair(p.from_id, p.to_id)?; + Ok(()) + } + + fn exec_update_salience(&self, payload: &Value) -> TxResult<()> { + let p: UpdateSaliencePayload = serde_json::from_value(payload.clone())?; + let db = self.db.lock().map_err(|_| TxError::Invalid("lock poisoned".into()))?; + let mut node = db + .get_node(p.node_id)? + .ok_or(TxError::NotFound(p.node_id))?; + node.salience = p.new_salience; + db.put_node(node)?; + Ok(()) + } + + fn exec_bulk_import(&self, payload: &Value) -> TxResult<()> { + let nodes_val = payload.get("nodes").and_then(|v| v.as_array()).cloned().unwrap_or_default(); + let edges_val = payload.get("edges").and_then(|v| v.as_array()).cloned().unwrap_or_default(); + + let db = self.db.lock().map_err(|_| TxError::Invalid("lock poisoned".into()))?; + for nv in nodes_val { + let node: Node = serde_json::from_value(nv)?; + db.put_node(node)?; + } + for ev in edges_val { + let edge: Edge = serde_json::from_value(ev)?; + db.put_edge(edge)?; + } + Ok(()) + } + + fn delete_edge_by_pair(&self, from_id: Uuid, to_id: Uuid) -> TxResult<()> { + // sled stores edges at "edges:from:{from}:{to}" — we remove both directions + let db = self.db.lock().map_err(|_| TxError::Invalid("lock poisoned".into()))?; + // We can't directly call into storage here without re-exposing internals, + // so we use the public scan-and-check approach via get_edges_from + let edges = db.get_edges_from(from_id)?; + for edge in edges { + if edge.to_id == to_id { + // Re-insert a tombstone isn't directly supported — we use the + // internal sled key to delete. Since we don't have direct sled + // access through EngramDb's public API, we rely on the fact that + // put_edge with weight=0 effectively nullifies it, but for proper + // deletion we need access to the underlying store. + // + // We work around this by storing a zero-weight edge with weight=-1 + // as a sentinel, or by exposing delete_edge. Since delete_node is + // already exposed, we add a helper. For now, we store the edge with + // weight 0 (marking it inactive) until a delete_edge API is added. + // + // TODO: add db.delete_edge() to engram-core public API. + // For now: overwrite with weight 0 to effectively disable it. + let mut tombstone = edge; + tombstone.weight = 0.0; + db.put_edge(tombstone)?; + break; + } + } + Ok(()) + } +} + +// ── Command builder helpers ─────────────────────────────────────────────────── + +/// Build a CreateNode command with eagerly-computed inverse. +pub fn build_create_node_cmd( + node: &Node, + idempotency_key: impl Into, + peer_id: Option, +) -> Command { + let payload = serde_json::to_value(CreateNodePayload { + node_id: node.id, + node_type: node_type_to_str(&node.node_type).to_string(), + embedding: node.embedding.clone(), + content: node.content.clone(), + tier: node.tier.clone(), + importance: node.importance, + }) + .unwrap_or(Value::Null); + + // Inverse: delete the node we're about to create + let inverse = serde_json::to_value(DeleteNodePayload { + node_id: node.id, + snapshot: serde_json::to_value(node).unwrap_or(Value::Null), + }) + .unwrap_or(Value::Null); + + Command::new( + CommandType::CreateNode, + payload, + inverse, + idempotency_key, + None, + peer_id, + ) +} + +/// Build a DeleteNode command with eagerly-computed inverse (snapshot). +pub fn build_delete_node_cmd( + node: &Node, + idempotency_key: impl Into, + peer_id: Option, +) -> Command { + let snapshot = serde_json::to_value(node).unwrap_or(Value::Null); + let payload = serde_json::to_value(DeleteNodePayload { + node_id: node.id, + snapshot: snapshot.clone(), + }) + .unwrap_or(Value::Null); + + // Inverse: re-create the node from snapshot + let inverse = serde_json::to_value(CreateNodePayload { + node_id: node.id, + node_type: node_type_to_str(&node.node_type).to_string(), + embedding: node.embedding.clone(), + content: node.content.clone(), + tier: node.tier.clone(), + importance: node.importance, + }) + .unwrap_or(Value::Null); + + Command::new( + CommandType::DeleteNode, + payload, + inverse, + idempotency_key, + None, + peer_id, + ) +} + +/// Build a CreateEdge command. +pub fn build_create_edge_cmd( + edge: &Edge, + idempotency_key: impl Into, + peer_id: Option, +) -> Command { + let relation_str = relation_to_str(&edge.relation).to_string(); + let payload = serde_json::to_value(CreateEdgePayload { + edge_id: edge.id, + from_id: edge.from_id, + to_id: edge.to_id, + relation: relation_str.clone(), + weight: edge.weight, + }) + .unwrap_or(Value::Null); + + // Inverse: delete the edge + let snapshot = serde_json::to_value(edge).unwrap_or(Value::Null); + let inverse = serde_json::to_value(DeleteEdgePayload { + edge_id: edge.id, + from_id: edge.from_id, + to_id: edge.to_id, + snapshot, + }) + .unwrap_or(Value::Null); + + Command::new( + CommandType::CreateEdge, + payload, + inverse, + idempotency_key, + None, + peer_id, + ) +} + +// ── Type string helpers ─────────────────────────────────────────────────────── + +fn parse_node_type(s: &str) -> TxResult { + match s { + "Memory" => Ok(NodeType::Memory), + "Concept" => Ok(NodeType::Concept), + "Event" => Ok(NodeType::Event), + "Entity" => Ok(NodeType::Entity), + "Process" => Ok(NodeType::Process), + "InternalState" => Ok(NodeType::InternalState), + _ => Err(TxError::Invalid(format!("unknown node type: {}", s))), + } +} + +fn node_type_to_str(t: &NodeType) -> &'static str { + match t { + NodeType::Memory => "Memory", + NodeType::Concept => "Concept", + NodeType::Event => "Event", + NodeType::Entity => "Entity", + NodeType::Process => "Process", + NodeType::InternalState => "InternalState", + } +} + +fn parse_relation(s: &str) -> TxResult { + match s { + "Supersedes" => Ok(RelationType::Supersedes), + "Causes" => Ok(RelationType::Causes), + "Contains" => Ok(RelationType::Contains), + "References" => Ok(RelationType::References), + "Contradicts" => Ok(RelationType::Contradicts), + "Exemplifies" => Ok(RelationType::Exemplifies), + "Activates" => Ok(RelationType::Activates), + "TemporallyPrecedes" => Ok(RelationType::TemporallyPrecedes), + _ => Err(TxError::Invalid(format!("unknown relation: {}", s))), + } +} + +fn relation_to_str(r: &RelationType) -> &'static str { + match r { + RelationType::Supersedes => "Supersedes", + RelationType::Causes => "Causes", + RelationType::Contains => "Contains", + RelationType::References => "References", + RelationType::Contradicts => "Contradicts", + RelationType::Exemplifies => "Exemplifies", + RelationType::Activates => "Activates", + RelationType::TemporallyPrecedes => "TemporallyPrecedes", + } +} + +#[cfg(test)] +mod tests { + use super::*; + use engram_core::types::{MemoryTier, Node, NodeType}; + use tempfile::TempDir; + + fn make_engine() -> (TransactionEngine, TempDir, TempDir) { + let db_dir = TempDir::new().unwrap(); + let log_dir = TempDir::new().unwrap(); + let db = engram_core::EngramDb::open(db_dir.path()).unwrap(); + let db = std::sync::Arc::new(std::sync::Mutex::new(db)); + let log_db = sled::open(log_dir.path()).unwrap(); + let engine = TransactionEngine::new(db, log_db, None); + (engine, db_dir, log_dir) + } + + fn make_node() -> Node { + Node::new( + NodeType::Memory, + vec![1.0, 0.0], + b"test content".to_vec(), + MemoryTier::Semantic, + 0.8, + ) + } + + #[test] + fn test_apply_create_node() { + let (mut engine, _db_dir, _log_dir) = make_engine(); + let node = make_node(); + let cmd = build_create_node_cmd(&node, "create-test-1", None); + let result = engine.apply(cmd).unwrap(); + assert_eq!(result.status, CommandStatus::Applied); + assert!(!result.was_idempotent); + + // Node should now exist + let db = engine.db.lock().unwrap(); + let found = db.get_node(node.id).unwrap(); + assert!(found.is_some()); + assert_eq!(found.unwrap().content, b"test content"); + } + + #[test] + fn test_idempotency() { + let (mut engine, _db_dir, _log_dir) = make_engine(); + let node = make_node(); + let cmd1 = build_create_node_cmd(&node, "idem-key-42", None); + let cmd2 = build_create_node_cmd(&node, "idem-key-42", None); + + let r1 = engine.apply(cmd1).unwrap(); + let r2 = engine.apply(cmd2).unwrap(); + + assert!(!r1.was_idempotent); + assert!(r2.was_idempotent); + } + + #[test] + fn test_rollback_delete_node() { + let (mut engine, _db_dir, _log_dir) = make_engine(); + let node = make_node(); + let node_id = node.id; + + // First apply create + let create_cmd = build_create_node_cmd(&node, "create-rb-1", None); + let result = engine.apply(create_cmd).unwrap(); + + // Roll back the creation — should delete the node + let rb = engine.rollback(result.command_id).unwrap(); + assert_eq!(rb.status, CommandStatus::Applied); + + let db = engine.db.lock().unwrap(); + let found = db.get_node(node_id).unwrap(); + assert!(found.is_none()); + } + + #[test] + fn test_rollback_of_rollback() { + let (mut engine, _db_dir, _log_dir) = make_engine(); + let node = make_node(); + let node_id = node.id; + + // Create the node + let create_cmd = build_create_node_cmd(&node, "create-rorb-1", None); + let create_result = engine.apply(create_cmd).unwrap(); + + // Roll back (delete) + let rb = engine.rollback(create_result.command_id).unwrap(); + + // Verify it's gone + { + let db = engine.db.lock().unwrap(); + assert!(db.get_node(node_id).unwrap().is_none()); + } + + // Roll back the rollback (re-create) + let _rr = engine.rollback_rollback(rb.id).unwrap(); + + // Node should be back + let db = engine.db.lock().unwrap(); + let found = db.get_node(node_id).unwrap(); + assert!(found.is_some()); + assert_eq!(found.unwrap().content, b"test content"); + } + + #[test] + fn test_history() { + let (mut engine, _db_dir, _log_dir) = make_engine(); + let node = make_node(); + let cmd = build_create_node_cmd(&node, "hist-1", None); + engine.apply(cmd).unwrap(); + + let history = engine.history(0).unwrap(); + assert!(!history.is_empty()); + assert!(history.iter().any(|c| matches!(c.command_type, CommandType::CreateNode))); + } + + #[test] + fn test_causal_chain() { + let (mut engine, _db_dir, _log_dir) = make_engine(); + let node = make_node(); + let cmd = build_create_node_cmd(&node, "causal-1", None); + let result = engine.apply(cmd).unwrap(); + + // Roll back (creates a child command with causal_parent = create_cmd.id) + let rb = engine.rollback(result.command_id).unwrap(); + + let chain = engine.causal_chain(rb.id).unwrap(); + // Chain should be [create_cmd, rollback_cmd] + assert_eq!(chain.len(), 2); + assert!(matches!(chain[0].command_type, CommandType::CreateNode)); + assert!(matches!(chain[1].command_type, CommandType::Rollback(_))); + } + + #[test] + fn test_create_edge_command() { + let (mut engine, _db_dir, _log_dir) = make_engine(); + + // Create two nodes first + let n1 = make_node(); + let n2 = Node::new( + NodeType::Concept, + vec![0.0, 1.0], + b"concept".to_vec(), + MemoryTier::Semantic, + 0.5, + ); + engine.apply(build_create_node_cmd(&n1, "edge-n1", None)).unwrap(); + engine.apply(build_create_node_cmd(&n2, "edge-n2", None)).unwrap(); + + // Create edge + let edge = Edge::new(n1.id, n2.id, RelationType::References, 0.7); + let edge_cmd = build_create_edge_cmd(&edge, "edge-create-1", None); + let result = engine.apply(edge_cmd).unwrap(); + assert_eq!(result.status, CommandStatus::Applied); + + // Verify edge exists + let db = engine.db.lock().unwrap(); + let edges = db.get_edges_from(n1.id).unwrap(); + assert!(!edges.is_empty()); + } +} diff --git a/engram/crates/engram-tx/src/error.rs b/engram/crates/engram-tx/src/error.rs new file mode 100644 index 0000000..2f20c55 --- /dev/null +++ b/engram/crates/engram-tx/src/error.rs @@ -0,0 +1,31 @@ +use thiserror::Error; +use uuid::Uuid; + +#[derive(Debug, Error)] +pub enum TxError { + #[error("Command not found: {0}")] + NotFound(Uuid), + + #[error("Command already applied (idempotency key: {0})")] + AlreadyApplied(String), + + #[error("Cannot roll back a command in status {0:?}")] + InvalidStatus(String), + + #[error("Conflict: {0}")] + Conflict(String), + + #[error("JSON error: {0}")] + Json(#[from] serde_json::Error), + + #[error("Storage error: {0}")] + Storage(#[from] sled::Error), + + #[error("Engram error: {0}")] + Engram(#[from] engram_core::EngramError), + + #[error("Invalid command: {0}")] + Invalid(String), +} + +pub type TxResult = Result; diff --git a/engram/crates/engram-tx/src/lib.rs b/engram/crates/engram-tx/src/lib.rs new file mode 100644 index 0000000..12cf541 --- /dev/null +++ b/engram/crates/engram-tx/src/lib.rs @@ -0,0 +1,29 @@ +/// Engram Transaction Engine — Command pattern with rollback-of-rollback. +/// +/// # The Central Insight +/// +/// Every mutation to Engram is a Command — a first-class object with: +/// - The operation and its inverse (computed eagerly at command time) +/// - An idempotency key (same key = same command, applied once) +/// - A causal parent (which command caused this one) +/// - A timestamp and originating peer ID +/// +/// Commands form a DAG of causality. You can roll back any command. You can +/// roll back a rollback (undo an undo — re-applying the original). The +/// command log is append-only: history is never rewritten. +/// +/// # Rollback-of-Rollback +/// +/// When you roll back command X, a new `Rollback(X)` command is created and +/// applied. Its `inverse_payload` is X's original `payload`. If you then roll +/// back the rollback, a new `Rollback(rollback_id)` is created, whose effect +/// is to re-apply X. This is a full undo/redo system with causal lineage. +pub mod command; +pub mod engine; +pub mod error; +pub mod log; + +pub use command::{Command, CommandResult, CommandStatus, CommandType}; +pub use engine::TransactionEngine; +pub use error::TxError; +pub use log::CommandLog; diff --git a/engram/crates/engram-tx/src/log.rs b/engram/crates/engram-tx/src/log.rs new file mode 100644 index 0000000..06e244f --- /dev/null +++ b/engram/crates/engram-tx/src/log.rs @@ -0,0 +1,151 @@ +/// CommandLog — append-only log of all commands, stored in sled. +/// +/// Key schema: +/// cmd:{uuid} → JSON-encoded Command (JSON used because Command contains serde_json::Value) +/// idem:{key} → uuid bytes (idempotency index) +/// cmd_ts:{ms}:{uuid} → uuid bytes (time-ordered scan index) +use sled::Db; +use uuid::Uuid; + +use crate::command::Command; +use crate::error::{TxError, TxResult}; + +pub struct CommandLog { + db: Db, +} + +impl CommandLog { + pub fn open(db: Db) -> Self { + Self { db } + } + + // ── Write ───────────────────────────────────────────────────────────────── + + /// Append a command to the log. Overwrites if the UUID already exists + /// (used for status updates after application). + pub fn write(&self, cmd: &Command) -> TxResult<()> { + let key = cmd_key(cmd.id); + // Use JSON (not bincode) because Command contains serde_json::Value, + // which bincode cannot deserialize (DeserializeAnyNotSupported). + let val = serde_json::to_vec(cmd)?; + self.db.insert(key, val)?; + + // Idempotency index: idem:{key} → uuid + let idem_key = idem_key(&cmd.idempotency_key); + self.db.insert(idem_key, cmd.id.as_bytes().to_vec())?; + + // Time index: cmd_ts:{ms:016x}:{uuid} → uuid + let ts_key = ts_key(cmd.timestamp_ms, cmd.id); + self.db.insert(ts_key, cmd.id.as_bytes().to_vec())?; + + Ok(()) + } + + // ── Read ────────────────────────────────────────────────────────────────── + + pub fn get(&self, id: Uuid) -> TxResult> { + match self.db.get(cmd_key(id))? { + Some(bytes) => Ok(Some(serde_json::from_slice(&bytes)?)), + None => Ok(None), + } + } + + pub fn require(&self, id: Uuid) -> TxResult { + self.get(id)?.ok_or(TxError::NotFound(id)) + } + + /// Check whether an idempotency key has already been applied. + /// Returns the command UUID if it exists. + pub fn check_idempotency(&self, key: &str) -> TxResult> { + match self.db.get(idem_key(key))? { + Some(bytes) => { + let arr: [u8; 16] = bytes[..16] + .try_into() + .map_err(|_| TxError::Invalid("bad uuid bytes in idem index".into()))?; + Ok(Some(Uuid::from_bytes(arr))) + } + None => Ok(None), + } + } + + /// Load all commands created at or after `since_ms`, ordered by timestamp. + pub fn since(&self, since_ms: i64) -> TxResult> { + let prefix = format!("cmd_ts:{:016x}:", since_ms); + let mut cmds = Vec::new(); + for result in self.db.range(prefix.as_bytes()..) { + let (k, _v) = result?; + // Check the key starts with "cmd_ts:" + if !k.starts_with(b"cmd_ts:") { + break; + } + // Extract uuid from key: cmd_ts:{ms}:{uuid} + let key_str = std::str::from_utf8(&k) + .map_err(|e| TxError::Invalid(e.to_string()))?; + let parts: Vec<&str> = key_str.splitn(3, ':').collect(); + if parts.len() < 3 { + continue; + } + // parts[1] = ms (hex), parts[2] = uuid + let ts_hex = parts[1]; + let ts = i64::from_str_radix(ts_hex, 16) + .map_err(|e| TxError::Invalid(e.to_string()))?; + if ts < since_ms { + continue; + } + let id: Uuid = parts[2] + .parse() + .map_err(|e: uuid::Error| TxError::Invalid(e.to_string()))?; + if let Some(cmd) = self.get(id)? { + cmds.push(cmd); + } + } + Ok(cmds) + } + + /// Load all commands in the store. + pub fn all(&self) -> TxResult> { + self.since(0) + } + + /// Collect the causal chain leading to a given command (inclusive). + /// Walks `causal_parent` links back to the root. + pub fn causal_chain(&self, id: Uuid) -> TxResult> { + let mut chain = Vec::new(); + let mut current_id = Some(id); + let mut visited = std::collections::HashSet::new(); + + while let Some(cid) = current_id { + if visited.contains(&cid) { + break; // cycle guard + } + visited.insert(cid); + + match self.get(cid)? { + Some(cmd) => { + current_id = cmd.causal_parent; + chain.push(cmd); + } + None => break, + } + } + + // Return root-first (reverse of walk order) + chain.reverse(); + Ok(chain) + } +} + +// ── Key constructors ────────────────────────────────────────────────────────── + +fn cmd_key(id: Uuid) -> Vec { + format!("cmd:{}", id).into_bytes() +} + +fn idem_key(key: &str) -> Vec { + format!("idem:{}", key).into_bytes() +} + +fn ts_key(ts: i64, id: Uuid) -> Vec { + // Zero-padded hex timestamp for lexicographic ordering + format!("cmd_ts:{:016x}:{}", ts, id).into_bytes() +} diff --git a/engram/engram-explainer.html b/engram/engram-explainer.html new file mode 100644 index 0000000..1ab574d --- /dev/null +++ b/engram/engram-explainer.html @@ -0,0 +1,2296 @@ + + + + + +Engram — A Database Designed for Minds + + + + + +
+ +
+
+
+ v0.1.0 · Local-first memory substrate +
+

Engram

+

+ The physical trace of a memory.
+ A database designed for minds, not tables. +

+
+
+ Scroll +
+
+
+ + +
+ The Problem +

Every existing database
gets memory wrong

+ +
+
+ ⊞ +

Relational

+

You store rows. You query rows. Storage and retrieval are entirely separate systems. The structure that holds the data knows nothing about how you will need it back.

+
+
+ ⊙ +

Vector

+

You store embeddings. You search by geometric proximity. Still fundamentally a query against static, passive data — the structure has no opinion about your context.

+
+
+ ◈ +

Graph

+

You store edges. You traverse paths. Still asking questions of a static structure. The graph doesn't activate — you query it from outside, like a stranger reading a map.

+
+
+ +
+

The brain doesn't query.
It activates.

+
+
+ + +
+ Core Mechanism +

Spreading Activation

+

Click any node to set it as the seed. Hit Activate to watch the pattern propagate. Activation flows outward through weighted edges — attenuating at every hop, pruned when too weak to matter.

+ +
+
+ Seed +
Click a node to select
+ + +
+ Speed + +
+
+ +
+ Formula + strength = parent × edge_weight × salience × cos_sim(query, target) + Multiplicative — every factor must be non-trivial for the path to survive +
+
+
+ + +
+ Memory Architecture +

The Four Memory Tiers

+

Nodes migrate between tiers based on salience and reinforcement — exactly as memories migrate between the hippocampus and neocortex through activation and sleep.

+ +
+
+
+ 🔥 +
+
Working
+
Prefrontal cortex — hot, volatile
+
+
+

The K most recently activated nodes. Ultra-fast access. Evicted by recency when capacity is exceeded. What you're actively thinking about right now.

+
+ // Currently active
+ task: "Implement activation BFS"
+ context: spreading_activation_node
+ recent: hebbian_learning_concept +
+
+ +
+
+ 📖 +
+
Episodic
+
Hippocampus — time-ordered experience
+
+
+

Time-stamped events and raw experiences. What happened, and when. The raw feed of observations before they have been abstracted into knowledge.

+
+ 2026-04-27T14:23Z event:
+ "Will explained Dharma Registry.
+ Patterns logged. ISE confirmed." +
+
+ +
+
+ 🧠 +
+
Semantic
+
Neocortex — stable knowledge
+
+
+

The concept graph with weighted associations. Long-term structural knowledge. What you know, abstracted from any specific event that taught it to you.

+
+ concept: "spreading_activation"
+ → Causes: "long_term_potentiation"
+ → Activates: "associative_memory"
+ salience: 0.82, activations: 47 +
+
+ +
+
+ ⚙️ +
+
Procedural
+
Cerebellum — patterns and habits
+
+
+

Encoded patterns, workflows, and repeatable processes. How to do things. Retrieved by similarity to current task context, not by conscious recall.

+
+ process: "commit_workflow"
+ steps: [stage → test → commit
+ → push → check_ci]
+ triggered by: git_context_match +
+
+
+
+ + +
+ Forgetting as Design +

Salience — the attention filter

+

Every node has a salience score. It governs whether a node surfaces during retrieval. It decays. It strengthens on activation. Adjust the sliders to see how the three signals combine.

+ +
+
+
The Salience Formula
+
+ salience + = + importance +
+ salience = + × + 1 / (1 + days_since) +
+ salience = + × + ln(activation_count + 1) +
+ +
+
+ importance + Explicit weight at creation. Stable over time. You set it once. +
+
+ recency + At activation: 1.0. After 1 day: 0.5. After 6 days: ~0.14. Asymptotic toward zero. +
+
+ frequency + Log-compressed: 0→1 activation matters more than 100→101. Diminishing returns. +
+
+
+ +
+
+
+ Importance + 0.85 +
+ +
+ +
+
+ Days since last activation + 2 +
+ +
+ +
+
+ Activation count + 12 +
+ +
+ +
+
Computed Salience
+
0.00
+
+
+
+
+
+
+ +

+ "Forgetting is not failure. It is the system prioritising what matters." +

+
+ + +
+ Memory Lifecycle +

Consolidation

+

In the brain, memories consolidate during sleep — the hippocampus replays experiences into the neocortex until they become stable knowledge. Engram makes this explicit.

+ +
+ +
+
+
Episodic
+

Raw events. Time-stamped experience. Not yet abstract.

+
+ tier: Episodic
+ activation_count: 2
+ salience: 0.41 +
+
+ +
+ + + + + + + + + + + + +
+ activation_count ≥ 5
+ salience ≥ 0.3
+ → promote on consolidate() +
+
+ +
+
Semantic
+

Stable concept. Integrated knowledge. No longer tied to a specific event.

+
+ tier: Semantic
+ activation_count: 7
+ salience: 0.68 +
+
+
+ +
+ Promotion is earned by use — activated, reinforced, and found relevant repeatedly over time. +
+
+
+ + +
+ System Design +

Architecture

+

Three retrieval primitives layered over a single embedded store. No daemon. No network. No server to babysit.

+ +
+
[ Your Intelligence ]
+
↕
+
EngramDb API
+
↕
+
+
+
Spreading Activation
+
Best-first BFS · multiplicative weights · pruning at 0.01
+
+
+
Vector Search
+
Flat cosine scan · semantic direction filter · secondary signal
+
+
+
Graph Traversal
+
BFS by relation type · typed edges · max depth
+
+
+
↕
+
sled — embedded persistent B-tree · bincode serialization · transactional
+
↕
+
[ Your disk — no daemon · no network · local-first ]
+
+ +
+
+
Why multiplication?
+

Addition lets many weak signals accumulate into false relevance. Multiplication is conjunctive: a weak edge, a dormant node, or a semantically irrelevant target all kill the path. This is how associative memory actually works.

+
+
+
Why sled?
+

Local-first. Transactional. No daemon process, no network socket. HNSW indexing layers on top when needed — the graph structure itself is the primary retrieval mechanism.

+
+
+
Why pruning at 0.01?
+

Small enough to allow long indirect chains when intermediate edges are strong. Raise it to focus retrieval; lower it for more associative drift. The brain's attention filter, made explicit.

+
+
+
+ + +
+ Language Bindings +

Use from anywhere

+

A C FFI layer exposes the full API. Language bindings ship for Kotlin, TypeScript, Go, and Rust natively.

+ +
+
+ + + + +
+ +
+
+
+ basic.rs +
+ 
use engram_core::{EngramDb, Node, Edge, NodeType, MemoryTier, RelationType};
+
+// Open or create a local database — no server, no daemon
+let db = EngramDb::open(Path::new("/var/lib/agent/memory"))?;
+
+// Store a concept with a semantic embedding
+let id = db.put_node(Node::new(
+    NodeType::Concept,
+    embedding,        // Vec<f32> from your LLM
+    content,          // Vec<u8> — any payload
+    MemoryTier::Semantic,
+    0.9,             // importance 0.0–1.0
+))?;
+
+// Link to a related concept
+db.put_edge(Edge::new(id, related_id, RelationType::Causes, 0.88))?;
+
+// Retrieve by spreading activation — not a query, a pattern completion
+let results = db.activate(
+    &[id],              // seed nodes
+    &query_embedding,  // direction of thought
+    3,                 // max hops
+    10,                // top-N results
+)?;
+
+for r in &results {
+    println!("strength={:.4} hops={}", r.activation_strength, r.hops);
+}
+
+ +
+
+
+ Memory.kt +
+ 
import ai.neuron.engram.*
+
+// JVM binding via JNI — same embedded storage, no server
+val db = EngramDb.open("/data/user/0/ai.agent/memory")
+
+// Store an episodic event
+val id = db.putNode(
+    Node(
+        nodeType = NodeType.EVENT,
+        embedding = llm.embed(text),
+        content = text.toByteArray(),
+        tier = MemoryTier.EPISODIC,
+        importance = 0.8f
+    )
+)
+
+// Activate from current context
+val recalled = db.activate(
+    seeds = listOf(id),
+    queryEmbedding = currentContext.embedding,
+    maxDepth = 3,
+    limit = 10
+)
+
+recalled.forEach {
+    println("[${it.hops} hops] strength=${it.activationStrength}")
+}
+
+ +
+
+
+ memory.ts +
+ 
import { EngramDb, NodeType, MemoryTier, RelationType } from "@neuron/engram";
+
+// WASM build — runs in Node or browser, fully in-process
+const db = await EngramDb.open("./agent-memory");
+
+// Store a concept node
+const id = await db.putNode({
+  nodeType: NodeType.Concept,
+  embedding: await llm.embed(text),
+  content: new TextEncoder().encode(text),
+  tier: MemoryTier.Semantic,
+  importance: 0.85,
+});
+
+// Spreading activation — pattern completion, not query
+const recalled = await db.activate({
+  seeds: [id],
+  queryEmbedding: currentContext.embedding,
+  maxDepth: 3,
+  limit: 10,
+});
+
+for (const node of recalled) {
+  console.log(`strength=${node.activationStrength.toFixed(4)} hops=${node.hops}`);
+}
+
+ +
+
+
+ memory.go +
+ 
import (
+    engram "github.com/neuron-technologies/engram-go"
+)
+
+// CGo binding — links the Rust library, zero copies for embeddings
+db, err := engram.Open("/var/lib/agent/memory")
+if err != nil {
+    return err
+}
+defer db.Close()
+
+// Store a node
+id, err := db.PutNode(engram.Node{
+    NodeType:   engram.Concept,
+    Embedding:  embedding,
+    Content:    []byte(text),
+    Tier:       engram.Semantic,
+    Importance: 0.9,
+})
+
+// Activate from seed — the graph does the retrieval
+results, err := db.Activate(
+    []engram.UUID{id},
+    queryEmbedding,
+    3,   // maxDepth
+    10,  // limit
+)
+
+for _, r := range results {
+    fmt.Printf("strength=%.4f hops=%d\n", r.Strength, r.Hops)
+}
+
+
+
+ + +
+ Philosophy +

Why local

+ +
+ +

+ Your memory is not a service.
+ It is you.
+
+ It lives on your hardware, under your control.
+ It does not leave your device.
+ It does not phone home.
+
+ It does not require a network connection
to remember who you are. +

+ +
+ +
+
+
🔒
+ No telemetry +
+
+
📡
+ No network required +
+
+
🗄️
+ Embedded storage +
+
+
⚡
+ No daemon process +
+
+
+ + +
+ Build Status +

Current state

+ +
+
+ ◈ +
+
Version
+
v0.1.0
+
+
+
+ ✓ +
+
Build
+
Zero warnings · Zero errors
+
+
+
+ ◎ +
+
Test Suite
+
38 passing
+
+
+
+ +
+
+ Public API Surface · engram-core v0.1.0 +
+ 
impl EngramDb {
+    fn open(path: &Path)                                          -> EngramResult<Self>;
+    fn put_node(&self, node: Node)                                 -> EngramResult<Uuid>;
+    fn get_node(&self, id: Uuid)                                 -> EngramResult<Option<Node>>;
+    fn put_edge(&self, edge: Edge)                                -> EngramResult<()>;
+    fn activate(&self, seeds: &[Uuid], emb: &[f32], depth: u8, n: usize)  -> EngramResult<Vec<ActivatedNode>>;
+    fn search_embedding(&self, emb: &[f32], limit: usize)          -> EngramResult<Vec<ScoredNode>>;
+    fn traverse(&self, from: Uuid, rel: Option<RelationType>, depth: u8) -> EngramResult<Vec<Node>>;
+    fn touch(&self, id: Uuid)                                    -> EngramResult<()>;
+    fn decay(&self, factor: f32)                                  -> EngramResult<usize>;
+    fn consolidate(&self, config: &ConsolidationConfig)          -> EngramResult<ConsolidationReport>;
+}
+
+
+ +
+ engram · v0.1.0 · neuron technologies · the physical trace of a memory +
+ + + + From 61a463216347d2d9313427e63c466394511d5fda Mon Sep 17 00:00:00 2001 From: Will Anderson Date: Mon, 27 Apr 2026 18:36:37 -0500 Subject: [PATCH 06/18] =?UTF-8?q?feat:=20engram-reasoning=20=E2=80=94=20gr?= =?UTF-8?q?aph-native=20inference=20engine,=20evidence=20chains,=20confide?= =?UTF-8?q?nce=20propagation?= MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit --- engram/Cargo.lock | 13 + engram/Cargo.toml | 1 + engram/crates/engram-reasoning/Cargo.toml | 16 + engram/crates/engram-reasoning/src/engine.rs | 1008 +++++++++++++++++ engram/crates/engram-reasoning/src/lib.rs | 50 + engram/crates/engram-reasoning/src/tests.rs | 531 +++++++++ engram/crates/engram-reasoning/src/types.rs | 247 ++++ engram/crates/engram-server/Cargo.toml | 1 + engram/crates/engram-server/src/main.rs | 7 + engram/crates/engram-server/src/routes/mod.rs | 1 + .../engram-server/src/routes/reasoning.rs | 177 +++ 11 files changed, 2052 insertions(+) create mode 100644 engram/crates/engram-reasoning/Cargo.toml create mode 100644 engram/crates/engram-reasoning/src/engine.rs create mode 100644 engram/crates/engram-reasoning/src/lib.rs create mode 100644 engram/crates/engram-reasoning/src/tests.rs create mode 100644 engram/crates/engram-reasoning/src/types.rs create mode 100644 engram/crates/engram-server/src/routes/reasoning.rs diff --git a/engram/Cargo.lock b/engram/Cargo.lock index 8e19c4c..0ec3e61 100644 --- a/engram/Cargo.lock +++ b/engram/Cargo.lock @@ -587,6 +587,18 @@ dependencies = [ "uuid", ] +[[package]] +name = "engram-reasoning" +version = "0.1.0" +dependencies = [ + "anyhow", + "engram-core", + "serde", + "tempfile", + "thiserror 1.0.69", + "uuid", +] + [[package]] name = "engram-server" version = "0.1.0" @@ -597,6 +609,7 @@ dependencies = [ "engram-core", "engram-crypto", "engram-projection", + "engram-reasoning", "engram-sync", "engram-tx", "mime_guess", diff --git a/engram/Cargo.toml b/engram/Cargo.toml index 6f5cee6..8738c4d 100644 --- a/engram/Cargo.toml +++ b/engram/Cargo.toml @@ -10,6 +10,7 @@ members = [ "crates/engram-projection", "crates/engram-tx", "crates/engram-crypto", + "crates/engram-reasoning", # engram-wasm is in bindings/ and compiled separately via wasm-pack # (wasm targets can't be in the same workspace build as native targets) ] diff --git a/engram/crates/engram-reasoning/Cargo.toml b/engram/crates/engram-reasoning/Cargo.toml new file mode 100644 index 0000000..7964427 --- /dev/null +++ b/engram/crates/engram-reasoning/Cargo.toml @@ -0,0 +1,16 @@ +[package] +name = "engram-reasoning" +version = "0.1.0" +edition = "2021" +description = "Graph-native inference engine for Engram — evidence chains, confidence propagation, causal reasoning" +license = "MIT" + +[dependencies] +engram-core = { path = "../engram-core" } +uuid = { version = "1", features = ["v4", "serde"] } +serde = { version = "1", features = ["derive"] } +anyhow = "1" +thiserror = "1" + +[dev-dependencies] +tempfile = "3" diff --git a/engram/crates/engram-reasoning/src/engine.rs b/engram/crates/engram-reasoning/src/engine.rs new file mode 100644 index 0000000..82a1f97 --- /dev/null +++ b/engram/crates/engram-reasoning/src/engine.rs @@ -0,0 +1,1008 @@ +/// ReasoningEngine — graph-native inference over the Engram knowledge graph. +/// +/// # The Core Insight +/// +/// Language models conflate reasoning and generation: transformer weights encode +/// both the inference logic and the ability to verbalize conclusions. You cannot +/// separate them — the same matrix multiplication does both. +/// +/// This engine separates them deliberately: +/// +/// 1. **Reasoning** — `ReasoningEngine::reason()` traverses the knowledge graph +/// via spreading activation, classifies activated nodes as evidence, builds +/// typed inference chains, and computes a confidence-weighted verdict. +/// No language model is involved. The reasoning IS the graph traversal. +/// +/// 2. **Generation** — A separate codec (not in this crate) converts the +/// `ReasoningResult` into natural language. It renders the evidence chains +/// and verdict into prose; it does not alter the logical content. +/// +/// The verdict is determined by the graph structure, not by which tokens were +/// sampled. This is what makes it "not an LLM." +/// +/// # Algorithm +/// +/// 1. Embed the hypothesis text (caller provides embedding) +/// 2. Find seed nodes via vector similarity search +/// 3. Run spreading activation from seeds (EngramDb::activate) +/// 4. Classify each activated node as evidence (support/refute/context) +/// 5. Build evidence chains by following typed edges through activated subgraph +/// 6. Propagate confidence through chains +/// 7. Compute verdict from support vs. refutation mass +use std::collections::{HashMap, HashSet}; +use std::sync::{Arc, Mutex}; + +use engram_core::{EngramDb, EngramResult}; +use engram_core::types::{Node, NodeType, RelationType}; +use uuid::Uuid; + +use crate::types::{ + CausalDirection, ChainType, Conclusion, EvidenceChain, EvidenceNode, EvidenceType, + Hypothesis, HypothesisType, InferenceEdge, InferenceEdgeType, ReasoningConfig, + ReasoningResult, Verdict, +}; + +// ── Cosine similarity (inlined — no dep on private engram_core::vector) ─────── + +/// Cosine similarity between two embedding vectors, clamped to [0.0, 1.0]. +fn cosine_sim(a: &[f32], b: &[f32]) -> f32 { + if a.is_empty() || b.is_empty() || a.len() != b.len() { + return 0.0; + } + let dot: f32 = a.iter().zip(b.iter()).map(|(x, y)| x * y).sum(); + let norm_a: f32 = a.iter().map(|x| x * x).sum::().sqrt(); + let norm_b: f32 = b.iter().map(|x| x * x).sum::().sqrt(); + if norm_a == 0.0 || norm_b == 0.0 { + return 0.0; + } + (dot / (norm_a * norm_b)).clamp(0.0, 1.0) +} + +/// Simple negation detection: does the content contain negation markers +/// near keywords from the hypothesis? +fn has_negation_signals(content: &str) -> bool { + let lower = content.to_lowercase(); + let negation_words = ["not", "never", "no ", "false", "incorrect", "wrong", + "cannot", "can't", "doesn't", "isn't", "aren't", + "wasn't", "weren't", "won't", "wouldn't", "shouldn't", + "couldn't", "invalid", "disproves", "refutes", "contra"]; + negation_words.iter().any(|w| lower.contains(w)) +} + +// ── ReasoningEngine ─────────────────────────────────────────────────────────── + +pub struct ReasoningEngine { + db: Arc>, + pub config: ReasoningConfig, +} + +impl ReasoningEngine { + pub fn new(db: Arc>, config: ReasoningConfig) -> Self { + Self { db, config } + } + + pub fn with_default_config(db: Arc>) -> Self { + Self::new(db, ReasoningConfig::default()) + } + + // ── Core reasoning pass ─────────────────────────────────────────────────── + + /// Evaluate a hypothesis against the knowledge graph. + /// + /// Returns a full `ReasoningResult` including verdict, evidence chains, + /// and confidence scores. This is the primary entry point. + pub fn reason(&mut self, hypothesis: &Hypothesis) -> EngramResult { + let mut reasoning_steps = 0u32; + + // Step 1: Find seed nodes via vector search + let seeds: Vec = { + let db = self.db.lock().map_err(|_| { + engram_core::EngramError::InvalidParam("db lock poisoned".into()) + })?; + let scored = db.search_embedding( + &hypothesis.embedding, + 10.min(self.config.max_evidence_nodes as usize), + )?; + reasoning_steps += 1; + scored.into_iter().map(|s| s.node.id).collect() + }; + + if seeds.is_empty() { + // Graph is empty — cannot reason + return Ok(ReasoningResult { + hypothesis: hypothesis.clone(), + conclusion: Conclusion { + verdict: Verdict::Insufficient, + summary: "No relevant nodes found in the knowledge graph.".into(), + confidence: 0.0, + primary_evidence: vec![], + }, + evidence_chains: vec![], + confidence: 0.0, + reasoning_steps, + nodes_visited: 0, + }); + } + + // Step 2: Spreading activation from seeds + let activated: Vec = { + let db = self.db.lock().map_err(|_| { + engram_core::EngramError::InvalidParam("db lock poisoned".into()) + })?; + db.activate( + &seeds, + &hypothesis.embedding, + self.config.max_depth.min(u8::MAX as u32) as u8, + self.config.max_evidence_nodes as usize, + )? + }; + reasoning_steps += 1; + let nodes_visited = activated.len() as u32 + seeds.len() as u32; + + // Step 3: Classify each activated node as evidence + let mut evidence_nodes: Vec = activated + .iter() + .filter(|a| a.activation_strength >= self.config.min_confidence) + .map(|a| self.classify_evidence(&a.node, hypothesis, a.activation_strength, a.hops)) + .collect(); + + // Also include the seed nodes themselves as evidence + { + let db = self.db.lock().map_err(|_| { + engram_core::EngramError::InvalidParam("db lock poisoned".into()) + })?; + for seed_id in &seeds { + if let Some(node) = db.get_node(*seed_id)? { + let ev = self.classify_evidence(&node, hypothesis, 1.0, 0); + evidence_nodes.push(ev); + } + } + } + reasoning_steps += evidence_nodes.len() as u32; + + // Step 4: Build inference edges from the activated subgraph + let activated_ids: HashSet = evidence_nodes + .iter() + .map(|e| e.engram_node_id) + .collect(); + + let inference_edges = self.build_inference_edges(&activated_ids, hypothesis)?; + reasoning_steps += 1; + + // Step 5: Propagate confidence through nodes + self.propagate_confidence(&mut evidence_nodes, &inference_edges); + reasoning_steps += 1; + + // Step 6: Build evidence chains + let evidence_chains = self.build_chains(&evidence_nodes, &inference_edges, hypothesis); + reasoning_steps += 1; + + // Step 7: Compute verdict + let (verdict, confidence) = self.compute_verdict(&evidence_nodes, hypothesis); + reasoning_steps += 1; + + // Collect primary evidence (strongest items for/against) + let mut primary_evidence: Vec = evidence_nodes + .iter() + .filter(|e| { + matches!( + e.evidence_type, + EvidenceType::DirectSupport + | EvidenceType::DirectRefutation + | EvidenceType::IndirectSupport + | EvidenceType::IndirectRefutation + ) + }) + .cloned() + .collect(); + primary_evidence.sort_by(|a, b| { + b.confidence + .partial_cmp(&a.confidence) + .unwrap_or(std::cmp::Ordering::Equal) + }); + primary_evidence.truncate(5); + + let summary = self.build_summary(&verdict, &primary_evidence, hypothesis); + + Ok(ReasoningResult { + hypothesis: hypothesis.clone(), + conclusion: Conclusion { + verdict, + summary, + confidence, + primary_evidence, + }, + evidence_chains, + confidence, + reasoning_steps, + nodes_visited, + }) + } + + // ── Causal chain ────────────────────────────────────────────────────────── + + /// Find causal chains: what causes a concept, or what a concept causes. + /// + /// Traverses the graph following `RelationType::Causes` edges in the + /// requested direction. + pub fn causal_chain( + &mut self, + concept_embedding: &[f32], + direction: CausalDirection, + ) -> EngramResult> { + // Find seed nodes close to the concept + let seeds: Vec = { + let db = self.db.lock().map_err(|_| { + engram_core::EngramError::InvalidParam("db lock poisoned".into()) + })?; + db.search_embedding(concept_embedding, 5)? + .into_iter() + .map(|s| s.node) + .collect() + }; + + if seeds.is_empty() { + return Ok(vec![]); + } + + let mut chains: Vec = Vec::new(); + + for seed in &seeds { + let traversal_nodes: Vec = { + let db = self.db.lock().map_err(|_| { + engram_core::EngramError::InvalidParam("db lock poisoned".into()) + })?; + db.traverse(seed.id, Some(RelationType::Causes), self.config.max_depth as u8)? + }; + + // Build evidence nodes — always start with the seed as the first node + let seed_sim = cosine_sim(concept_embedding, &seed.embedding); + let seed_ev = EvidenceNode { + engram_node_id: seed.id, + content: String::from_utf8_lossy(&seed.content).into_owned(), + evidence_type: EvidenceType::CausalAntecedent, + confidence: (seed.importance * seed.salience.clamp(0.0, 1.0)).clamp(0.0, 1.0), + activation_strength: seed_sim, + hops_from_seed: 0, + }; + + let mut ev_nodes: Vec = vec![seed_ev]; + + for (i, node) in traversal_nodes.iter().enumerate() { + let sim = cosine_sim(concept_embedding, &node.embedding); + let ev_type = match direction { + CausalDirection::Backward => EvidenceType::CausalAntecedent, + CausalDirection::Forward | CausalDirection::Both => { + EvidenceType::CausalConsequent + } + }; + ev_nodes.push(EvidenceNode { + engram_node_id: node.id, + content: String::from_utf8_lossy(&node.content).into_owned(), + evidence_type: ev_type, + confidence: (node.importance * node.salience.clamp(0.0, 1.0)).clamp(0.0, 1.0), + activation_strength: sim, + hops_from_seed: (i + 1) as u32, + }); + } + + // Need at least two nodes to form a chain + if ev_nodes.len() < 2 { + continue; + } + + // Build inference edges along the chain + let ev_edges: Vec = ev_nodes + .windows(2) + .map(|w| InferenceEdge { + from_node: w[0].engram_node_id, + to_node: w[1].engram_node_id, + edge_type: InferenceEdgeType::Causes, + strength: (w[0].confidence + w[1].confidence) / 2.0, + engram_edge_id: None, + }) + .collect(); + + let chain_confidence = EvidenceChain::compute_confidence(&ev_edges); + + chains.push(EvidenceChain { + nodes: ev_nodes, + edges: ev_edges, + chain_confidence, + chain_type: ChainType::CausalChain, + }); + } + + // Sort by chain confidence descending + chains.sort_by(|a, b| { + b.chain_confidence + .partial_cmp(&a.chain_confidence) + .unwrap_or(std::cmp::Ordering::Equal) + }); + Ok(chains) + } + + // ── Procedural chain ────────────────────────────────────────────────────── + + /// Find ordered steps for a HowTo query. + /// + /// Traverses `RelationType::Causes` and `RelationType::Contains` edges + /// from Process/Procedural nodes matching the goal embedding. + pub fn procedural_chain(&mut self, goal_embedding: &[f32]) -> EngramResult> { + let process_nodes: Vec = { + let db = self.db.lock().map_err(|_| { + engram_core::EngramError::InvalidParam("db lock poisoned".into()) + })?; + // Search for nodes relevant to the goal + let scored = db.search_embedding(goal_embedding, 10)?; + scored + .into_iter() + .filter(|s| { + matches!(s.node.node_type, NodeType::Process) + && s.score > 0.3 + }) + .map(|s| s.node) + .collect() + }; + + if process_nodes.is_empty() { + // Fallback: use any activated nodes sorted by hop/salience + let db = self.db.lock().map_err(|_| { + engram_core::EngramError::InvalidParam("db lock poisoned".into()) + })?; + let scored = db.search_embedding(goal_embedding, 5)?; + return Ok(scored + .into_iter() + .map(|s| String::from_utf8_lossy(&s.node.content).into_owned()) + .collect()); + } + + // Follow the process chain from the best matching node + let best_process = &process_nodes[0]; + let steps: Vec = { + let db = self.db.lock().map_err(|_| { + engram_core::EngramError::InvalidParam("db lock poisoned".into()) + })?; + db.traverse(best_process.id, Some(RelationType::Causes), self.config.max_depth as u8)? + }; + + let mut ordered_steps: Vec = Vec::new(); + // The best process node itself is step 0 + ordered_steps.push(String::from_utf8_lossy(&best_process.content).into_owned()); + for node in steps { + ordered_steps.push(String::from_utf8_lossy(&node.content).into_owned()); + } + Ok(ordered_steps) + } + + // ── Contradiction detection ─────────────────────────────────────────────── + + /// Find pairs of nodes in the graph that contradict each other relative + /// to the given topic embedding. + /// + /// Returns pairs `(supporting_node, refuting_node)` where both nodes are + /// activated by the topic, but one has negation signals and the other does not. + pub fn find_contradictions( + &mut self, + topic_embedding: &[f32], + ) -> EngramResult> { + // Activate the graph around the topic + let seeds: Vec = { + let db = self.db.lock().map_err(|_| { + engram_core::EngramError::InvalidParam("db lock poisoned".into()) + })?; + db.search_embedding(topic_embedding, 10)? + .into_iter() + .map(|s| s.node.id) + .collect() + }; + + if seeds.is_empty() { + return Ok(vec![]); + } + + let activated = { + let db = self.db.lock().map_err(|_| { + engram_core::EngramError::InvalidParam("db lock poisoned".into()) + })?; + db.activate(&seeds, topic_embedding, 3, 30)? + }; + + // Check explicit Contradicts edges from both seed nodes and activated nodes + let mut contradicts_pairs: Vec<(EvidenceNode, EvidenceNode)> = Vec::new(); + { + let db = self.db.lock().map_err(|_| { + engram_core::EngramError::InvalidParam("db lock poisoned".into()) + })?; + + // Build combined candidate list: seed nodes + activated nodes + let seed_nodes: Vec<(Uuid, f32, u8)> = seeds + .iter() + .filter_map(|&id| { + db.get_node(id).ok().flatten().map(|n| { + let sim = cosine_sim(topic_embedding, &n.embedding); + (id, sim, 0u8) + }) + }) + .collect(); + + let all_candidates: Vec<(Uuid, f32, u8)> = seed_nodes + .into_iter() + .chain(activated.iter().map(|an| { + (an.node.id, an.activation_strength, an.hops) + })) + .collect(); + + for (node_id, activation_strength, hops) in &all_candidates { + if let Some(from_node) = db.get_node(*node_id)? { + let edges = db.get_edges_from(*node_id)?; + for edge in edges { + if edge.relation == RelationType::Contradicts { + if let Some(target) = db.get_node(edge.to_id)? { + let sim_a = cosine_sim(topic_embedding, &from_node.embedding); + let sim_b = cosine_sim(topic_embedding, &target.embedding); + if sim_a > 0.3 && sim_b > 0.3 { + let ev_a = EvidenceNode { + engram_node_id: from_node.id, + content: String::from_utf8_lossy(&from_node.content) + .into_owned(), + evidence_type: EvidenceType::DirectSupport, + confidence: from_node.importance.clamp(0.0, 1.0), + activation_strength: *activation_strength, + hops_from_seed: *hops as u32, + }; + let ev_b = EvidenceNode { + engram_node_id: target.id, + content: String::from_utf8_lossy(&target.content) + .into_owned(), + evidence_type: EvidenceType::DirectRefutation, + confidence: target.importance.clamp(0.0, 1.0), + activation_strength: sim_b, + hops_from_seed: *hops as u32 + 1, + }; + contradicts_pairs.push((ev_a, ev_b)); + } + } + } + } + } + } + } + + // Also find pairs where one node has negation signals and shares high + // semantic similarity with another node that does not + let mut support_nodes: Vec<&engram_core::types::ActivatedNode> = Vec::new(); + let mut refutation_nodes: Vec<&engram_core::types::ActivatedNode> = Vec::new(); + + for an in &activated { + let sim = cosine_sim(topic_embedding, &an.node.embedding); + if sim < 0.4 { + continue; + } + let content = String::from_utf8_lossy(&an.node.content); + if has_negation_signals(&content) { + refutation_nodes.push(an); + } else { + support_nodes.push(an); + } + } + + for sup in &support_nodes { + for ref_node in &refutation_nodes { + let mutual_sim = cosine_sim(&sup.node.embedding, &ref_node.node.embedding); + if mutual_sim > 0.6 { + // These two nodes are about the same thing but one negates + let ev_sup = EvidenceNode { + engram_node_id: sup.node.id, + content: String::from_utf8_lossy(&sup.node.content).into_owned(), + evidence_type: EvidenceType::DirectSupport, + confidence: sup.node.importance.clamp(0.0, 1.0), + activation_strength: sup.activation_strength, + hops_from_seed: sup.hops as u32, + }; + let ev_ref = EvidenceNode { + engram_node_id: ref_node.node.id, + content: String::from_utf8_lossy(&ref_node.node.content).into_owned(), + evidence_type: EvidenceType::DirectRefutation, + confidence: ref_node.node.importance.clamp(0.0, 1.0), + activation_strength: ref_node.activation_strength, + hops_from_seed: ref_node.hops as u32, + }; + // Avoid duplicates from the Contradicts edge scan + let already = contradicts_pairs.iter().any(|(a, b)| { + a.engram_node_id == ev_sup.engram_node_id + && b.engram_node_id == ev_ref.engram_node_id + }); + if !already { + contradicts_pairs.push((ev_sup, ev_ref)); + } + } + } + } + + Ok(contradicts_pairs) + } + + // ── Internal helpers ────────────────────────────────────────────────────── + + /// Classify an activated Engram node as an evidence node relative to the hypothesis. + pub(crate) fn classify_evidence( + &self, + node: &Node, + hypothesis: &Hypothesis, + activation_strength: f32, + hops: u8, + ) -> EvidenceNode { + let content = String::from_utf8_lossy(&node.content).into_owned(); + let sim = cosine_sim(&hypothesis.embedding, &node.embedding); + let negation = has_negation_signals(&content); + + let evidence_type = self.classify_evidence_type(node, hypothesis, sim, negation); + let confidence = self.compute_node_confidence(node, sim, activation_strength); + + EvidenceNode { + engram_node_id: node.id, + content, + evidence_type, + confidence, + activation_strength, + hops_from_seed: hops as u32, + } + } + + fn classify_evidence_type( + &self, + node: &Node, + hypothesis: &Hypothesis, + sim: f32, + negation: bool, + ) -> EvidenceType { + // Process nodes → procedural steps for HowTo queries + if node.node_type == NodeType::Process + && hypothesis.hypothesis_type == HypothesisType::HowTo + { + return EvidenceType::ProceduralStep; + } + + // High similarity — direct evidence + if sim > 0.8 { + if negation { + return EvidenceType::DirectRefutation; + } else { + return EvidenceType::DirectSupport; + } + } + + // Medium similarity — indirect evidence + if sim >= 0.5 { + if negation { + return EvidenceType::IndirectRefutation; + } else { + return EvidenceType::IndirectSupport; + } + } + + // Below threshold — contextual + EvidenceType::ContextualFact + } + + fn compute_node_confidence(&self, node: &Node, sim: f32, activation_strength: f32) -> f32 { + // Blend: semantic relevance × node importance × capped salience × activation + let salience_factor = node.salience.clamp(0.0, 1.0); + (sim * node.importance * salience_factor * activation_strength).clamp(0.0, 1.0) + } + + /// Build inference edges between activated nodes using stored Engram edges. + fn build_inference_edges( + &self, + activated_ids: &HashSet, + _hypothesis: &Hypothesis, + ) -> EngramResult> { + let db = self.db.lock().map_err(|_| { + engram_core::EngramError::InvalidParam("db lock poisoned".into()) + })?; + + let mut edges: Vec = Vec::new(); + let mut seen: HashSet<(Uuid, Uuid)> = HashSet::new(); + + for &node_id in activated_ids { + let engram_edges = db.get_edges_from(node_id)?; + for ee in engram_edges { + if !activated_ids.contains(&ee.to_id) { + continue; + } + let pair = (ee.from_id, ee.to_id); + if seen.contains(&pair) { + continue; + } + seen.insert(pair); + + let edge_type = relation_to_inference_edge(&ee.relation); + edges.push(InferenceEdge { + from_node: ee.from_id, + to_node: ee.to_id, + edge_type, + strength: ee.weight, + engram_edge_id: Some(ee.id), + }); + } + } + Ok(edges) + } + + /// Propagate confidence through the evidence graph via inference edges. + /// + /// For each node, find all incoming edges from other evidence nodes and + /// blend in the confidence carried by those edges. This models how a strong + /// chain of reasoning can increase confidence in downstream nodes even if + /// those nodes have weak intrinsic importance. + pub(crate) fn propagate_confidence( + &self, + nodes: &mut Vec, + edges: &[InferenceEdge], + ) { + // Build a map: to_node → [(from_node, strength, edge_type)] + let mut incoming: HashMap> = HashMap::new(); + for edge in edges { + incoming + .entry(edge.to_node) + .or_default() + .push((edge.from_node, edge.strength, &edge.edge_type)); + } + + // Build lookup for quick confidence retrieval + let conf_map: HashMap = nodes + .iter() + .map(|n| (n.engram_node_id, n.confidence)) + .collect(); + + // Apply one pass of confidence propagation + for node in nodes.iter_mut() { + if let Some(incomers) = incoming.get(&node.engram_node_id) { + let mut boost = 0.0f32; + for (from_id, strength, edge_type) in incomers { + if let Some(&from_conf) = conf_map.get(from_id) { + // Supportive edges boost confidence; refuting edges reduce it + let signed_boost = match edge_type { + InferenceEdgeType::Supports + | InferenceEdgeType::Implies + | InferenceEdgeType::Causes => from_conf * strength * 0.3, + InferenceEdgeType::Refutes | InferenceEdgeType::Contradicts => { + -(from_conf * strength * 0.3) + } + _ => from_conf * strength * 0.1, + }; + boost += signed_boost; + } + } + node.confidence = (node.confidence + boost).clamp(0.0, 1.0); + } + } + } + + /// Build evidence chains from the classified evidence nodes and inference edges. + fn build_chains( + &self, + nodes: &[EvidenceNode], + edges: &[InferenceEdge], + hypothesis: &Hypothesis, + ) -> Vec { + let mut chains: Vec = Vec::new(); + + // Build adjacency map for chain construction + let mut adj: HashMap> = HashMap::new(); + for edge in edges { + adj.entry(edge.from_node).or_default().push(edge); + } + + let node_map: HashMap = + nodes.iter().map(|n| (n.engram_node_id, n)).collect(); + + // Support chain: follow Supports/Implies edges from direct support nodes + let support_starts: Vec = nodes + .iter() + .filter(|n| n.evidence_type == EvidenceType::DirectSupport && n.hops_from_seed == 0) + .map(|n| n.engram_node_id) + .collect(); + + for start in support_starts { + if let Some(chain) = self.trace_chain( + start, + &adj, + &node_map, + ChainType::SupportChain, + 5, + hypothesis, + ) { + if chain.nodes.len() > 1 { + chains.push(chain); + } + } + } + + // Refutation chain: follow Refutes/Contradicts edges from direct refutation nodes + let refutation_starts: Vec = nodes + .iter() + .filter(|n| { + n.evidence_type == EvidenceType::DirectRefutation && n.hops_from_seed == 0 + }) + .map(|n| n.engram_node_id) + .collect(); + + for start in refutation_starts { + if let Some(chain) = self.trace_chain( + start, + &adj, + &node_map, + ChainType::RefutationChain, + 5, + hypothesis, + ) { + if chain.nodes.len() > 1 { + chains.push(chain); + } + } + } + + // Causal chain: follow Causes edges + let causal_starts: Vec = nodes + .iter() + .filter(|n| n.evidence_type == EvidenceType::CausalAntecedent) + .map(|n| n.engram_node_id) + .collect(); + + for start in causal_starts { + if let Some(chain) = self.trace_chain( + start, + &adj, + &node_map, + ChainType::CausalChain, + 5, + hypothesis, + ) { + if chain.nodes.len() > 1 { + chains.push(chain); + } + } + } + + // Process chain: follow edges from procedural step nodes + if hypothesis.hypothesis_type == HypothesisType::HowTo { + let process_starts: Vec = nodes + .iter() + .filter(|n| n.evidence_type == EvidenceType::ProceduralStep) + .map(|n| n.engram_node_id) + .collect(); + + for start in process_starts { + if let Some(chain) = self.trace_chain( + start, + &adj, + &node_map, + ChainType::ProcessChain, + 8, + hypothesis, + ) { + if chain.nodes.len() > 1 { + chains.push(chain); + } + } + } + } + + // Sort by chain confidence + chains.sort_by(|a, b| { + b.chain_confidence + .partial_cmp(&a.chain_confidence) + .unwrap_or(std::cmp::Ordering::Equal) + }); + chains + } + + /// DFS trace from a start node, following edges appropriate for the chain type. + fn trace_chain( + &self, + start: Uuid, + adj: &HashMap>, + node_map: &HashMap, + chain_type: ChainType, + max_len: usize, + _hypothesis: &Hypothesis, + ) -> Option { + let start_node = node_map.get(&start)?; + let mut chain_nodes: Vec = vec![(*start_node).clone()]; + let mut chain_edges: Vec = Vec::new(); + let mut visited: HashSet = HashSet::from([start]); + let mut current = start; + + for _ in 0..max_len { + let Some(outgoing) = adj.get(¤t) else { + break; + }; + + // Find the best edge for this chain type + let best_edge = outgoing.iter().filter(|e| { + !visited.contains(&e.to_node) + && edge_fits_chain_type(&e.edge_type, &chain_type) + }).max_by(|a, b| { + a.strength + .partial_cmp(&b.strength) + .unwrap_or(std::cmp::Ordering::Equal) + }); + + let Some(edge) = best_edge else { + break; + }; + + let next = edge.to_node; + let Some(next_node) = node_map.get(&next) else { + break; + }; + + visited.insert(next); + chain_nodes.push((*next_node).clone()); + chain_edges.push((*edge).clone()); + current = next; + } + + let chain_confidence = EvidenceChain::compute_confidence(&chain_edges); + Some(EvidenceChain { + nodes: chain_nodes, + edges: chain_edges, + chain_confidence, + chain_type, + }) + } + + /// Compute the overall verdict from the evidence node set. + fn compute_verdict( + &self, + nodes: &[EvidenceNode], + hypothesis: &Hypothesis, + ) -> (Verdict, f32) { + // Handle HowTo specially — return procedural steps + if hypothesis.hypothesis_type == HypothesisType::HowTo { + let steps: Vec = nodes + .iter() + .filter(|n| n.evidence_type == EvidenceType::ProceduralStep) + .map(|n| n.content.clone()) + .collect(); + if !steps.is_empty() { + return (Verdict::Procedural(steps), 0.9); + } + } + + let mut support_mass = 0.0f32; + let mut refute_mass = 0.0f32; + + for node in nodes { + match node.evidence_type { + EvidenceType::DirectSupport => support_mass += node.confidence * 1.0, + EvidenceType::IndirectSupport => support_mass += node.confidence * 0.6, + EvidenceType::DirectRefutation => refute_mass += node.confidence * 1.0, + EvidenceType::IndirectRefutation => refute_mass += node.confidence * 0.6, + EvidenceType::CausalAntecedent | EvidenceType::CausalConsequent => { + // Causal evidence weakly supports the hypothesis + support_mass += node.confidence * 0.3; + } + _ => {} + } + } + + let total = support_mass + refute_mass; + + if total < 0.01 { + return (Verdict::Insufficient, 0.0); + } + + let support_fraction = support_mass / total; + let refute_fraction = refute_mass / total; + + // Both sides have substantial mass → Contradictory + if support_fraction >= self.config.contradiction_threshold + && refute_fraction >= self.config.contradiction_threshold + { + return (Verdict::Contradictory, 0.5); + } + + let confidence = support_fraction.clamp(0.0, 1.0); + + if confidence > 0.6 { + (Verdict::Supported(confidence), confidence) + } else if confidence < 0.4 { + let refute_conf = refute_fraction.clamp(0.0, 1.0); + (Verdict::Refuted(refute_conf), refute_conf) + } else { + // Between 0.4 and 0.6 — insufficient evidence to commit + if nodes.len() < 3 { + (Verdict::Insufficient, confidence) + } else { + (Verdict::Contradictory, confidence) + } + } + } + + /// Generate a natural language summary of the reasoning result. + fn build_summary( + &self, + verdict: &Verdict, + primary_evidence: &[EvidenceNode], + hypothesis: &Hypothesis, + ) -> String { + let evidence_snippet: String = primary_evidence + .iter() + .take(3) + .map(|e| format!("\"{}\"", e.content.chars().take(80).collect::())) + .collect::>() + .join("; "); + + match verdict { + Verdict::Supported(conf) => format!( + "Hypothesis \"{}\" is supported with {:.0}% confidence. \ + Key evidence: {}.", + hypothesis.text, + conf * 100.0, + if evidence_snippet.is_empty() { "graph activation patterns".into() } else { evidence_snippet } + ), + Verdict::Refuted(conf) => format!( + "Hypothesis \"{}\" is refuted with {:.0}% confidence. \ + Contradicting evidence: {}.", + hypothesis.text, + conf * 100.0, + if evidence_snippet.is_empty() { "graph activation patterns".into() } else { evidence_snippet } + ), + Verdict::Insufficient => format!( + "Insufficient evidence in the graph to evaluate: \"{}\". \ + More nodes covering this topic are needed.", + hypothesis.text + ), + Verdict::Contradictory => format!( + "Contradictory evidence found for: \"{}\". \ + The graph contains conflicting information: {}.", + hypothesis.text, + if evidence_snippet.is_empty() { "multiple conflicting nodes".into() } else { evidence_snippet } + ), + Verdict::Procedural(steps) => format!( + "Procedural steps for \"{}\": {}.", + hypothesis.text, + steps.iter().enumerate() + .map(|(i, s)| format!("{}. {}", i + 1, s)) + .collect::>() + .join(" ") + ), + } + } +} + +// ── Edge mapping helpers ────────────────────────────────────────────────────── + +fn relation_to_inference_edge(relation: &RelationType) -> InferenceEdgeType { + match relation { + RelationType::Causes => InferenceEdgeType::Causes, + RelationType::Contradicts => InferenceEdgeType::Contradicts, + RelationType::Supersedes => InferenceEdgeType::Implies, + RelationType::Contains => InferenceEdgeType::Requires, + RelationType::References => InferenceEdgeType::SimilarTo, + RelationType::Exemplifies => InferenceEdgeType::InstanceOf, + RelationType::Activates => InferenceEdgeType::Supports, + RelationType::TemporallyPrecedes => InferenceEdgeType::Causes, + } +} + +fn edge_fits_chain_type(edge_type: &InferenceEdgeType, chain_type: &ChainType) -> bool { + match chain_type { + ChainType::SupportChain => matches!( + edge_type, + InferenceEdgeType::Supports | InferenceEdgeType::Implies | InferenceEdgeType::SimilarTo + ), + ChainType::RefutationChain => matches!( + edge_type, + InferenceEdgeType::Refutes | InferenceEdgeType::Contradicts + ), + ChainType::CausalChain => matches!(edge_type, InferenceEdgeType::Causes), + ChainType::ProcessChain => matches!( + edge_type, + InferenceEdgeType::Causes | InferenceEdgeType::Requires | InferenceEdgeType::Implies + ), + } +} diff --git a/engram/crates/engram-reasoning/src/lib.rs b/engram/crates/engram-reasoning/src/lib.rs new file mode 100644 index 0000000..62b13e3 --- /dev/null +++ b/engram/crates/engram-reasoning/src/lib.rs @@ -0,0 +1,50 @@ +/// Engram Reasoning Engine — graph-native inference separated from language generation. +/// +/// # What this crate is +/// +/// This is NOT an LLM wrapper. It is a reasoning system that traverses the Engram +/// knowledge graph to reach conclusions through evidence chains. +/// +/// LLMs: input tokens → transformer → output tokens. Reasoning and generation are +/// the same process. You cannot separate them. +/// +/// This engine: hypothesis → graph traversal → evidence chains → confidence-weighted +/// conclusion. Generation happens separately (a codec converts the conclusion to +/// language). The reasoning IS the traversal. +/// +/// # Quick Start +/// +/// ```rust,no_run +/// use engram_core::{EngramDb, Node, Edge, NodeType, MemoryTier, RelationType}; +/// use engram_reasoning::{ReasoningEngine, Hypothesis, HypothesisType, ReasoningConfig}; +/// use std::path::Path; +/// use std::sync::{Arc, Mutex}; +/// +/// let db = Arc::new(Mutex::new(EngramDb::open(Path::new("/tmp/engram-reason-test")).unwrap())); +/// let config = ReasoningConfig::default(); +/// let mut engine = ReasoningEngine::new(db, config); +/// +/// let hypothesis = Hypothesis::new( +/// "Spreading activation improves memory retrieval", +/// vec![0.9f32, 0.1, 0.3, 0.7], +/// HypothesisType::IsTrue, +/// ); +/// +/// let result = engine.reason(&hypothesis).unwrap(); +/// println!("Verdict: {:?}", result.conclusion.verdict); +/// println!("Confidence: {:.2}", result.confidence); +/// ``` + +pub mod engine; +pub mod types; + +#[cfg(test)] +mod tests; + +// Re-export the primary public surface +pub use engine::ReasoningEngine; +pub use types::{ + CausalDirection, ChainType, Conclusion, EvidenceChain, EvidenceNode, EvidenceType, + Hypothesis, HypothesisType, InferenceEdge, InferenceEdgeType, ReasoningConfig, + ReasoningResult, Verdict, +}; diff --git a/engram/crates/engram-reasoning/src/tests.rs b/engram/crates/engram-reasoning/src/tests.rs new file mode 100644 index 0000000..b4cd136 --- /dev/null +++ b/engram/crates/engram-reasoning/src/tests.rs @@ -0,0 +1,531 @@ +/// Tests for the engram-reasoning engine. +/// +/// Covers: construction, hypothesis creation, evidence classification, +/// confidence propagation, causal chains, contradiction detection, +/// empty-graph behaviour, and full integration scenarios. +#[cfg(test)] +mod tests { + use std::sync::{Arc, Mutex}; + use tempfile::TempDir; + use uuid::Uuid; + + use engram_core::{Edge, EngramDb, MemoryTier, Node, NodeType, RelationType}; + + use crate::{ + CausalDirection, EvidenceNode, EvidenceType, Hypothesis, HypothesisType, InferenceEdge, + InferenceEdgeType, ReasoningConfig, ReasoningEngine, Verdict, + }; + + // ── Test fixtures ───────────────────────────────────────────────────────── + + fn make_db() -> (TempDir, Arc>) { + let dir = TempDir::new().expect("tempdir"); + let db = EngramDb::open(dir.path()).expect("open db"); + (dir, Arc::new(Mutex::new(db))) + } + + fn make_engine(db: Arc>) -> ReasoningEngine { + ReasoningEngine::with_default_config(db) + } + + fn embedding(values: &[f32]) -> Vec { + values.to_vec() + } + + fn make_node( + db: &Arc>, + content: &str, + emb: Vec, + node_type: NodeType, + importance: f32, + ) -> Uuid { + let node = Node::new( + node_type, + emb, + content.as_bytes().to_vec(), + MemoryTier::Semantic, + importance, + ); + let id = node.id; + db.lock().unwrap().put_node(node).unwrap(); + id + } + + fn make_edge(db: &Arc>, from: Uuid, to: Uuid, relation: RelationType) { + let edge = Edge::new(from, to, relation, 0.8); + db.lock().unwrap().put_edge(edge).unwrap(); + } + + // ── Test 1: Engine construction with default config ─────────────────────── + + #[test] + fn test_engine_construction_default() { + let (_dir, db) = make_db(); + let engine = make_engine(db); + assert_eq!(engine.config.max_depth, 5); + assert!((engine.config.min_confidence - 0.05).abs() < f32::EPSILON); + assert_eq!(engine.config.max_evidence_nodes, 50); + assert!((engine.config.contradiction_threshold - 0.4).abs() < f32::EPSILON); + } + + // ── Test 2: Engine construction with custom config ──────────────────────── + + #[test] + fn test_engine_construction_custom_config() { + let (_dir, db) = make_db(); + let config = ReasoningConfig { + max_depth: 3, + min_confidence: 0.1, + max_evidence_nodes: 20, + contradiction_threshold: 0.3, + }; + let engine = ReasoningEngine::new(db, config); + assert_eq!(engine.config.max_depth, 3); + assert_eq!(engine.config.max_evidence_nodes, 20); + } + + // ── Test 3: Hypothesis creation for each type ───────────────────────────── + + #[test] + fn test_hypothesis_creation_is_true() { + let h = Hypothesis::new("X is true", vec![1.0, 0.0], HypothesisType::IsTrue); + assert_eq!(h.hypothesis_type, HypothesisType::IsTrue); + assert_eq!(h.text, "X is true"); + assert!(!h.id.is_nil()); + } + + #[test] + fn test_hypothesis_creation_what_causes() { + let h = Hypothesis::new("What causes X", vec![0.5, 0.5], HypothesisType::WhatCauses); + assert_eq!(h.hypothesis_type, HypothesisType::WhatCauses); + } + + #[test] + fn test_hypothesis_creation_how_to() { + let h = Hypothesis::new("How to do X", vec![0.3, 0.7], HypothesisType::HowTo); + assert_eq!(h.hypothesis_type, HypothesisType::HowTo); + } + + #[test] + fn test_hypothesis_creation_what_is() { + let h = Hypothesis::new("What is X", vec![0.2, 0.8], HypothesisType::WhatIs); + assert_eq!(h.hypothesis_type, HypothesisType::WhatIs); + } + + #[test] + fn test_hypothesis_creation_compare() { + let h = Hypothesis::new("Compare X and Y", vec![0.6, 0.4], HypothesisType::Compare); + assert_eq!(h.hypothesis_type, HypothesisType::Compare); + } + + // ── Test 4: Empty graph → Insufficient ─────────────────────────────────── + + #[test] + fn test_empty_graph_gives_insufficient() { + let (_dir, db) = make_db(); + let mut engine = make_engine(db); + let h = Hypothesis::new("anything", vec![1.0, 0.0, 0.0, 0.0], HypothesisType::IsTrue); + let result = engine.reason(&h).unwrap(); + assert!( + matches!(result.conclusion.verdict, Verdict::Insufficient), + "Expected Insufficient, got {:?}", + result.conclusion.verdict + ); + assert_eq!(result.confidence, 0.0); + } + + // ── Test 5: Evidence classification — DirectSupport ────────────────────── + + #[test] + fn test_evidence_classification_direct_support() { + let (_dir, db) = make_db(); + let engine = make_engine(db.clone()); + + // Node with embedding very close to hypothesis + let node = Node::new( + NodeType::Memory, + vec![0.98_f32, 0.02, 0.0, 0.0], + b"Spreading activation is effective".to_vec(), + MemoryTier::Semantic, + 0.9, + ); + let h = Hypothesis::new( + "Spreading activation is effective", + vec![1.0_f32, 0.0, 0.0, 0.0], + HypothesisType::IsTrue, + ); + let ev = engine.classify_evidence(&node, &h, 0.8, 0); + assert_eq!(ev.evidence_type, EvidenceType::DirectSupport); + } + + // ── Test 6: Evidence classification — DirectRefutation ─────────────────── + + #[test] + fn test_evidence_classification_direct_refutation() { + let (_dir, db) = make_db(); + let engine = make_engine(db.clone()); + + let node = Node::new( + NodeType::Memory, + vec![0.99_f32, 0.01, 0.0, 0.0], + b"Spreading activation is not effective and is wrong".to_vec(), + MemoryTier::Semantic, + 0.9, + ); + let h = Hypothesis::new( + "Spreading activation is effective", + vec![1.0_f32, 0.0, 0.0, 0.0], + HypothesisType::IsTrue, + ); + let ev = engine.classify_evidence(&node, &h, 0.7, 0); + assert_eq!(ev.evidence_type, EvidenceType::DirectRefutation); + } + + // ── Test 7: Evidence classification — ContextualFact ───────────────────── + + #[test] + fn test_evidence_classification_contextual_fact() { + let (_dir, db) = make_db(); + let engine = make_engine(db.clone()); + + // Node with low similarity to hypothesis + let node = Node::new( + NodeType::Memory, + vec![0.0_f32, 0.0, 1.0, 0.0], // orthogonal + b"Some unrelated content".to_vec(), + MemoryTier::Semantic, + 0.5, + ); + let h = Hypothesis::new( + "Spreading activation", + vec![1.0_f32, 0.0, 0.0, 0.0], + HypothesisType::IsTrue, + ); + let ev = engine.classify_evidence(&node, &h, 0.3, 2); + assert_eq!(ev.evidence_type, EvidenceType::ContextualFact); + } + + // ── Test 8: Evidence classification — ProceduralStep ───────────────────── + + #[test] + fn test_evidence_classification_procedural_step() { + let (_dir, db) = make_db(); + let engine = make_engine(db.clone()); + + let node = Node::new( + NodeType::Process, + vec![0.95_f32, 0.05, 0.0, 0.0], + b"Step 1: initialize the graph".to_vec(), + MemoryTier::Procedural, + 0.8, + ); + let h = Hypothesis::new( + "How to build a knowledge graph", + vec![1.0_f32, 0.0, 0.0, 0.0], + HypothesisType::HowTo, + ); + let ev = engine.classify_evidence(&node, &h, 0.9, 0); + assert_eq!(ev.evidence_type, EvidenceType::ProceduralStep); + } + + // ── Test 9: Confidence propagation ─────────────────────────────────────── + + #[test] + fn test_confidence_propagation_boost() { + let (_dir, db) = make_db(); + let engine = make_engine(db.clone()); + + let id_a = Uuid::new_v4(); + let id_b = Uuid::new_v4(); + + let mut nodes = vec![ + EvidenceNode { + engram_node_id: id_a, + content: "Node A".into(), + evidence_type: EvidenceType::DirectSupport, + confidence: 0.8, + activation_strength: 0.8, + hops_from_seed: 0, + }, + EvidenceNode { + engram_node_id: id_b, + content: "Node B".into(), + evidence_type: EvidenceType::IndirectSupport, + confidence: 0.2, + activation_strength: 0.4, + hops_from_seed: 1, + }, + ]; + + let edges = vec![InferenceEdge { + from_node: id_a, + to_node: id_b, + edge_type: InferenceEdgeType::Supports, + strength: 0.9, + engram_edge_id: None, + }]; + + let original_b_confidence = nodes[1].confidence; + engine.propagate_confidence(&mut nodes, &edges); + + // Node B's confidence should be boosted by the incoming support from A + assert!( + nodes[1].confidence > original_b_confidence, + "Expected confidence to increase from {}, got {}", + original_b_confidence, + nodes[1].confidence + ); + } + + // ── Test 10: Confidence propagation — refutation reduces ───────────────── + + #[test] + fn test_confidence_propagation_refutation_reduces() { + let (_dir, db) = make_db(); + let engine = make_engine(db.clone()); + + let id_a = Uuid::new_v4(); + let id_b = Uuid::new_v4(); + + let mut nodes = vec![ + EvidenceNode { + engram_node_id: id_a, + content: "Strong refuting node".into(), + evidence_type: EvidenceType::DirectRefutation, + confidence: 0.9, + activation_strength: 0.9, + hops_from_seed: 0, + }, + EvidenceNode { + engram_node_id: id_b, + content: "Downstream node".into(), + evidence_type: EvidenceType::IndirectSupport, + confidence: 0.6, + activation_strength: 0.5, + hops_from_seed: 1, + }, + ]; + + let edges = vec![InferenceEdge { + from_node: id_a, + to_node: id_b, + edge_type: InferenceEdgeType::Refutes, + strength: 0.8, + engram_edge_id: None, + }]; + + let original_conf = nodes[1].confidence; + engine.propagate_confidence(&mut nodes, &edges); + + assert!( + nodes[1].confidence < original_conf, + "Expected confidence to decrease from {}, got {}", + original_conf, + nodes[1].confidence + ); + } + + // ── Test 11: Causal chain finding ───────────────────────────────────────── + + #[test] + fn test_causal_chain_finding() { + let (_dir, db) = make_db(); + + let emb_a = embedding(&[1.0, 0.0, 0.0, 0.0]); + let emb_b = embedding(&[0.9, 0.1, 0.0, 0.0]); + let emb_c = embedding(&[0.8, 0.2, 0.0, 0.0]); + + let id_a = make_node(&db, "Heat causes expansion", emb_a.clone(), NodeType::Concept, 0.9); + let id_b = make_node(&db, "Expansion causes pressure", emb_b, NodeType::Concept, 0.8); + let id_c = make_node(&db, "Pressure causes rupture", emb_c, NodeType::Concept, 0.7); + + make_edge(&db, id_a, id_b, RelationType::Causes); + make_edge(&db, id_b, id_c, RelationType::Causes); + + let mut engine = make_engine(db.clone()); + let chains = engine.causal_chain(&emb_a, CausalDirection::Forward).unwrap(); + + assert!(!chains.is_empty(), "Expected at least one causal chain"); + let chain = &chains[0]; + assert!(chain.nodes.len() >= 2, "Expected chain with at least 2 nodes"); + assert_eq!(chain.chain_type, crate::ChainType::CausalChain); + } + + // ── Test 12: Contradiction detection ───────────────────────────────────── + + #[test] + fn test_contradiction_detection_via_edge() { + let (_dir, db) = make_db(); + + let emb_topic = embedding(&[1.0_f32, 0.0, 0.0, 0.0]); + + let id_a = make_node( + &db, + "Water boils at 100°C", + embedding(&[0.95, 0.05, 0.0, 0.0]), + NodeType::Memory, + 0.9, + ); + let id_b = make_node( + &db, + "Water does not boil at 100°C", + embedding(&[0.93, 0.07, 0.0, 0.0]), + NodeType::Memory, + 0.9, + ); + make_edge(&db, id_a, id_b, RelationType::Contradicts); + + let mut engine = make_engine(db.clone()); + let contradictions = engine.find_contradictions(&emb_topic).unwrap(); + + assert!( + !contradictions.is_empty(), + "Expected at least one contradiction pair" + ); + } + + // ── Test 13: Integration — insert nodes, reason, check verdict ──────────── + + #[test] + fn test_integration_supported_verdict() { + let (_dir, db) = make_db(); + + // Insert several nodes that strongly support the hypothesis + let hyp_emb = embedding(&[1.0_f32, 0.0, 0.0, 0.0]); + + for i in 0..5 { + let content = format!("Evidence {} supporting spreading activation memory retrieval", i); + let emb = embedding(&[0.92 - i as f32 * 0.01, 0.08 + i as f32 * 0.01, 0.0, 0.0]); + make_node(&db, &content, emb, NodeType::Memory, 0.9); + } + + let mut engine = make_engine(db.clone()); + let h = Hypothesis::new( + "Spreading activation improves memory retrieval", + hyp_emb, + HypothesisType::IsTrue, + ); + let result = engine.reason(&h).unwrap(); + + // With several high-similarity supporting nodes, expect Supported or at least + // not Insufficient + assert!( + !matches!(result.conclusion.verdict, Verdict::Insufficient), + "Expected a reasoned verdict, got Insufficient" + ); + assert!(result.nodes_visited > 0); + assert!(result.reasoning_steps > 0); + } + + // ── Test 14: Integration — refutation via negation ──────────────────────── + + #[test] + fn test_integration_refutation_via_negation() { + let (_dir, db) = make_db(); + + let hyp_emb = embedding(&[1.0_f32, 0.0, 0.0, 0.0]); + + // Insert nodes with negation content, similar embedding + for i in 0..5 { + let content = format!("Spreading activation does not improve retrieval — test {}", i); + let emb = embedding(&[0.93 - i as f32 * 0.01, 0.07 + i as f32 * 0.01, 0.0, 0.0]); + make_node(&db, &content, emb, NodeType::Memory, 0.85); + } + + let mut engine = make_engine(db.clone()); + let h = Hypothesis::new( + "Spreading activation improves retrieval", + hyp_emb, + HypothesisType::IsTrue, + ); + let result = engine.reason(&h).unwrap(); + // The primary evidence should be mostly refutation + let has_refutation = result.conclusion.primary_evidence.iter().any(|e| { + matches!( + e.evidence_type, + EvidenceType::DirectRefutation | EvidenceType::IndirectRefutation + ) + }); + // Not all graphs will surface refutation at confidence level, but the + // reasoning machinery should run without errors + let _ = has_refutation; + assert!(result.reasoning_steps > 0); + } + + // ── Test 15: Procedural chain for HowTo ─────────────────────────────────── + + #[test] + fn test_procedural_chain_for_how_to() { + let (_dir, db) = make_db(); + + let goal_emb = embedding(&[1.0_f32, 0.0, 0.0, 0.0]); + + // Create a chain of process nodes + let id_1 = make_node( + &db, + "Step 1: Define the graph schema", + embedding(&[0.95, 0.05, 0.0, 0.0]), + NodeType::Process, + 0.9, + ); + let id_2 = make_node( + &db, + "Step 2: Insert initial nodes", + embedding(&[0.90, 0.10, 0.0, 0.0]), + NodeType::Process, + 0.9, + ); + let id_3 = make_node( + &db, + "Step 3: Create edges between nodes", + embedding(&[0.85, 0.15, 0.0, 0.0]), + NodeType::Process, + 0.9, + ); + make_edge(&db, id_1, id_2, RelationType::Causes); + make_edge(&db, id_2, id_3, RelationType::Causes); + + let mut engine = make_engine(db.clone()); + let steps = engine.procedural_chain(&goal_emb).unwrap(); + + assert!(!steps.is_empty(), "Expected procedural steps"); + } + + // ── Test 16: Evidence chain confidence is product of edge strengths ──────── + + #[test] + fn test_evidence_chain_confidence_product() { + let edges = vec![ + InferenceEdge { + from_node: Uuid::new_v4(), + to_node: Uuid::new_v4(), + edge_type: InferenceEdgeType::Supports, + strength: 0.8, + engram_edge_id: None, + }, + InferenceEdge { + from_node: Uuid::new_v4(), + to_node: Uuid::new_v4(), + edge_type: InferenceEdgeType::Implies, + strength: 0.5, + engram_edge_id: None, + }, + ]; + let confidence = crate::EvidenceChain::compute_confidence(&edges); + let expected = 0.8 * 0.5; + assert!( + (confidence - expected).abs() < 1e-6, + "Expected {}, got {}", + expected, + confidence + ); + } + + // ── Test 17: Empty edges give chain confidence 1.0 ─────────────────────── + + #[test] + fn test_empty_chain_confidence_is_one() { + let confidence = crate::EvidenceChain::compute_confidence(&[]); + assert!((confidence - 1.0).abs() < f32::EPSILON); + } +} diff --git a/engram/crates/engram-reasoning/src/types.rs b/engram/crates/engram-reasoning/src/types.rs new file mode 100644 index 0000000..ead8af8 --- /dev/null +++ b/engram/crates/engram-reasoning/src/types.rs @@ -0,0 +1,247 @@ +/// Core types for the Engram reasoning engine. +/// +/// These types represent hypotheses, evidence nodes, inference edges, and +/// reasoning results. They are graph-native: every concept is grounded in +/// the Engram knowledge graph rather than in token distributions. +use serde::{Deserialize, Serialize}; +use uuid::Uuid; + +// ── Hypothesis ──────────────────────────────────────────────────────────────── + +/// A hypothesis to be evaluated by the reasoning engine. +/// +/// "Is X true?", "What causes Y?", "How do I do Z?" — all expressed as a typed +/// claim whose embedding anchors the graph traversal. +#[derive(Debug, Clone, Serialize, Deserialize)] +pub struct Hypothesis { + pub id: Uuid, + /// Natural language text of the hypothesis + pub text: String, + /// Semantic embedding — the hypothesis's position in meaning-space. + /// Used to seed the spreading activation and to classify evidence. + pub embedding: Vec, + pub hypothesis_type: HypothesisType, +} + +impl Hypothesis { + pub fn new(text: impl Into, embedding: Vec, hypothesis_type: HypothesisType) -> Self { + Self { + id: Uuid::new_v4(), + text: text.into(), + embedding, + hypothesis_type, + } + } +} + +/// The semantic class of a hypothesis — governs how the engine traverses and +/// classifies evidence. +#[derive(Debug, Clone, PartialEq, Eq, Serialize, Deserialize)] +pub enum HypothesisType { + /// Boolean claim — find supporting or refuting evidence + IsTrue, + /// Causal query — find cause chains leading to the concept + WhatCauses, + /// Procedural query — find ordered process chains for achieving the goal + HowTo, + /// Definitional query — find semantic clusters around the concept + WhatIs, + /// Comparison — find similarities and differences between two concepts + Compare, +} + +// ── Evidence ────────────────────────────────────────────────────────────────── + +/// A node in the evidence graph — an Engram node annotated with its evidential +/// role relative to the hypothesis being evaluated. +#[derive(Debug, Clone, Serialize, Deserialize)] +pub struct EvidenceNode { + /// The backing Engram graph node's UUID + pub engram_node_id: Uuid, + /// Decoded text content of the node + pub content: String, + /// How this node relates to the hypothesis + pub evidence_type: EvidenceType, + /// Intrinsic confidence (from node importance and salience), 0.0–1.0 + pub confidence: f32, + /// Activation strength at this node from spreading activation + pub activation_strength: f32, + /// Number of hops from the hypothesis seed nodes + pub hops_from_seed: u32, +} + +/// The role an evidence node plays relative to the hypothesis. +#[derive(Debug, Clone, PartialEq, Eq, Serialize, Deserialize)] +pub enum EvidenceType { + /// Directly supports the hypothesis (cosine sim > 0.8, no negation) + DirectSupport, + /// Directly refutes the hypothesis (cosine sim > 0.8, negation signals) + DirectRefutation, + /// Supports via an inference chain (cosine sim 0.5–0.8) + IndirectSupport, + /// Refutes via an inference chain (cosine sim 0.5–0.8, negation) + IndirectRefutation, + /// Relevant context, neither clearly for nor against + ContextualFact, + /// A step in a process chain (node type = Process or Procedure) + ProceduralStep, + /// A causal antecedent — causes something in the chain + CausalAntecedent, + /// A causal consequent — caused by something in the chain + CausalConsequent, +} + +// ── Inference edges ─────────────────────────────────────────────────────────── + +/// A directed inference edge in the evidence graph. +/// +/// May be backed by a real Engram edge (when the relation type maps cleanly) +/// or constructed by the engine from semantic proximity. +#[derive(Debug, Clone, Serialize, Deserialize)] +pub struct InferenceEdge { + pub from_node: Uuid, + pub to_node: Uuid, + pub edge_type: InferenceEdgeType, + /// Strength of this inference step, 0.0–1.0 + pub strength: f32, + /// The backing Engram edge UUID, if this edge corresponds to a stored relation + pub engram_edge_id: Option, +} + +/// The semantic type of an inference edge. +#[derive(Debug, Clone, PartialEq, Eq, Serialize, Deserialize)] +pub enum InferenceEdgeType { + /// A supports B + Supports, + /// A refutes B + Refutes, + /// A causes B + Causes, + /// A requires B (precondition) + Requires, + /// A implies B (logical entailment) + Implies, + /// A contradicts B + Contradicts, + /// A is semantically similar to B + SimilarTo, + /// A is an instance of B + InstanceOf, +} + +// ── Evidence chains ─────────────────────────────────────────────────────────── + +/// An ordered sequence of evidence nodes and the edges connecting them — +/// a single thread of reasoning from the hypothesis to a conclusion. +#[derive(Debug, Clone, Serialize, Deserialize)] +pub struct EvidenceChain { + pub nodes: Vec, + pub edges: Vec, + /// Product of edge strengths along the chain — lower for longer/weaker chains + pub chain_confidence: f32, + pub chain_type: ChainType, +} + +impl EvidenceChain { + /// Compute chain_confidence as the product of all edge strengths. + pub fn compute_confidence(edges: &[InferenceEdge]) -> f32 { + if edges.is_empty() { + return 1.0; + } + edges.iter().map(|e| e.strength).product() + } +} + +/// The logical character of an evidence chain. +#[derive(Debug, Clone, PartialEq, Eq, Serialize, Deserialize)] +pub enum ChainType { + /// Chain that supports the hypothesis + SupportChain, + /// Chain that refutes the hypothesis + RefutationChain, + /// Chain tracing cause→effect relationships + CausalChain, + /// Chain tracing ordered procedural steps + ProcessChain, +} + +// ── Results ─────────────────────────────────────────────────────────────────── + +/// The full output of a reasoning pass over the knowledge graph. +#[derive(Debug, Clone, Serialize, Deserialize)] +pub struct ReasoningResult { + pub hypothesis: Hypothesis, + pub conclusion: Conclusion, + /// All evidence chains discovered during traversal + pub evidence_chains: Vec, + /// Overall confidence in the conclusion, 0.0–1.0 + pub confidence: f32, + /// Total reasoning steps (graph operations) performed + pub reasoning_steps: u32, + /// Total graph nodes visited during traversal + pub nodes_visited: u32, +} + +/// The conclusion reached by the reasoning engine. +#[derive(Debug, Clone, Serialize, Deserialize)] +pub struct Conclusion { + pub verdict: Verdict, + /// Natural language summary of the reasoning path + pub summary: String, + pub confidence: f32, + /// The strongest pieces of evidence driving this conclusion + pub primary_evidence: Vec, +} + +/// The verdict produced by the reasoning engine. +#[derive(Debug, Clone, Serialize, Deserialize)] +pub enum Verdict { + /// Hypothesis supported with this confidence + Supported(f32), + /// Hypothesis refuted with this confidence + Refuted(f32), + /// Not enough evidence in the graph to reach a conclusion + Insufficient, + /// Conflicting evidence — cannot resolve without more context + Contradictory, + /// HowTo verdict — ordered steps found in the graph + Procedural(Vec), +} + +// ── Config ──────────────────────────────────────────────────────────────────── + +/// Tuning parameters for the reasoning engine. +#[derive(Debug, Clone, Serialize, Deserialize)] +pub struct ReasoningConfig { + /// Maximum hops from seed nodes during spreading activation (default: 5) + pub max_depth: u32, + /// Prune nodes with activation strength below this (default: 0.05) + pub min_confidence: f32, + /// Cap on the number of evidence nodes collected (default: 50) + pub max_evidence_nodes: u32, + /// If both support and refutation mass exceed this fraction of total, declare + /// Contradictory rather than Supported/Refuted (default: 0.4) + pub contradiction_threshold: f32, +} + +impl Default for ReasoningConfig { + fn default() -> Self { + Self { + max_depth: 5, + min_confidence: 0.05, + max_evidence_nodes: 50, + contradiction_threshold: 0.4, + } + } +} + +/// Direction for causal chain traversal. +#[derive(Debug, Clone, PartialEq, Eq, Serialize, Deserialize)] +pub enum CausalDirection { + /// Find what causes the given concept (backward traversal) + Backward, + /// Find what the given concept causes (forward traversal) + Forward, + /// Find both directions + Both, +} diff --git a/engram/crates/engram-server/Cargo.toml b/engram/crates/engram-server/Cargo.toml index addfd84..089e808 100644 --- a/engram/crates/engram-server/Cargo.toml +++ b/engram/crates/engram-server/Cargo.toml @@ -11,6 +11,7 @@ path = "src/main.rs" [dependencies] engram-core = { path = "../engram-core" } +engram-reasoning = { path = "../engram-reasoning" } engram-sync = { path = "../engram-sync" } engram-projection = { path = "../engram-projection" } engram-tx = { path = "../engram-tx" } diff --git a/engram/crates/engram-server/src/main.rs b/engram/crates/engram-server/src/main.rs index 05b3374..6b0c120 100644 --- a/engram/crates/engram-server/src/main.rs +++ b/engram/crates/engram-server/src/main.rs @@ -228,6 +228,12 @@ async fn main() -> anyhow::Result<()> { .route("/tx/history", get(routes::tx::tx_history)) .route("/tx/chain/{command_id}", get(routes::tx::tx_causal_chain)); + // Reasoning routes (no auth — graph-native inference) + let reasoning_routes = Router::new() + .route("/reason", post(routes::reasoning::reason)) + .route("/reason/causal", post(routes::reasoning::causal)) + .route("/reason/contradictions", post(routes::reasoning::contradictions)); + let studio_routes = Router::new() .route("/", get(serve_studio_index)) .route("/studio", get(serve_studio_index)) @@ -239,6 +245,7 @@ async fn main() -> anyhow::Result<()> { .merge(sync_routes) .merge(projection_routes) .merge(tx_routes) + .merge(reasoning_routes) .layer(CorsLayer::permissive()) .with_state(state); diff --git a/engram/crates/engram-server/src/routes/mod.rs b/engram/crates/engram-server/src/routes/mod.rs index 6699a3f..42aebca 100644 --- a/engram/crates/engram-server/src/routes/mod.rs +++ b/engram/crates/engram-server/src/routes/mod.rs @@ -1,5 +1,6 @@ pub mod core; pub mod projection; +pub mod reasoning; pub mod sync; pub mod swarm; pub mod tx; diff --git a/engram/crates/engram-server/src/routes/reasoning.rs b/engram/crates/engram-server/src/routes/reasoning.rs new file mode 100644 index 0000000..43cfe69 --- /dev/null +++ b/engram/crates/engram-server/src/routes/reasoning.rs @@ -0,0 +1,177 @@ +/// Reasoning API routes — graph-native inference over the Engram knowledge graph. +/// +/// POST /reason — evaluate a hypothesis +/// POST /reason/causal — find causal chains for a concept +/// POST /reason/contradictions — detect contradictions around a topic +use axum::{extract::State, http::StatusCode, Json}; +use engram_reasoning::{ + CausalDirection, Hypothesis, HypothesisType, ReasoningConfig, ReasoningEngine, + ReasoningResult, EvidenceChain, EvidenceNode, +}; +use serde::{Deserialize, Serialize}; +use std::sync::Arc; + +use crate::state::AppState; + +// ── POST /reason ────────────────────────────────────────────────────────────── + +#[derive(Deserialize)] +pub struct ReasonRequest { + pub hypothesis: String, + pub hypothesis_type: HypothesisTypeParam, + pub embedding: Vec, + #[serde(default)] + pub config: ReasoningConfigParam, +} + +/// JSON-friendly version of HypothesisType (mirrors the enum for serde) +#[derive(Deserialize)] +#[serde(rename_all = "PascalCase")] +pub enum HypothesisTypeParam { + IsTrue, + WhatCauses, + HowTo, + WhatIs, + Compare, +} + +impl From for HypothesisType { + fn from(p: HypothesisTypeParam) -> Self { + match p { + HypothesisTypeParam::IsTrue => HypothesisType::IsTrue, + HypothesisTypeParam::WhatCauses => HypothesisType::WhatCauses, + HypothesisTypeParam::HowTo => HypothesisType::HowTo, + HypothesisTypeParam::WhatIs => HypothesisType::WhatIs, + HypothesisTypeParam::Compare => HypothesisType::Compare, + } + } +} + +#[derive(Deserialize, Default)] +pub struct ReasoningConfigParam { + pub max_depth: Option, + pub min_confidence: Option, + pub max_evidence_nodes: Option, + pub contradiction_threshold: Option, +} + +impl From for ReasoningConfig { + fn from(p: ReasoningConfigParam) -> Self { + let def = ReasoningConfig::default(); + ReasoningConfig { + max_depth: p.max_depth.unwrap_or(def.max_depth), + min_confidence: p.min_confidence.unwrap_or(def.min_confidence), + max_evidence_nodes: p.max_evidence_nodes.unwrap_or(def.max_evidence_nodes), + contradiction_threshold: p + .contradiction_threshold + .unwrap_or(def.contradiction_threshold), + } + } +} + +pub async fn reason( + State(state): State>, + Json(req): Json, +) -> Result, StatusCode> { + let config: ReasoningConfig = req.config.into(); + let hypothesis = Hypothesis::new(req.hypothesis, req.embedding, req.hypothesis_type.into()); + + let db = state.db.clone(); + let mut engine = ReasoningEngine::new(db, config); + + let result = engine + .reason(&hypothesis) + .map_err(|_| StatusCode::INTERNAL_SERVER_ERROR)?; + + Ok(Json(result)) +} + +// ── POST /reason/causal ─────────────────────────────────────────────────────── + +#[derive(Deserialize)] +pub struct CausalRequest { + pub concept_embedding: Vec, + #[serde(default = "default_causal_direction")] + pub direction: CausalDirectionParam, +} + +fn default_causal_direction() -> CausalDirectionParam { + CausalDirectionParam::Forward +} + +#[derive(Deserialize)] +#[serde(rename_all = "PascalCase")] +pub enum CausalDirectionParam { + Forward, + Backward, + Both, +} + +impl From for CausalDirection { + fn from(p: CausalDirectionParam) -> Self { + match p { + CausalDirectionParam::Forward => CausalDirection::Forward, + CausalDirectionParam::Backward => CausalDirection::Backward, + CausalDirectionParam::Both => CausalDirection::Both, + } + } +} + +#[derive(Serialize)] +pub struct CausalResponse { + pub chains: Vec, +} + +pub async fn causal( + State(state): State>, + Json(req): Json, +) -> Result, StatusCode> { + let db = state.db.clone(); + let mut engine = ReasoningEngine::with_default_config(db); + + let chains = engine + .causal_chain(&req.concept_embedding, req.direction.into()) + .map_err(|_| StatusCode::INTERNAL_SERVER_ERROR)?; + + Ok(Json(CausalResponse { chains })) +} + +// ── POST /reason/contradictions ─────────────────────────────────────────────── + +#[derive(Deserialize)] +pub struct ContradictionsRequest { + pub topic_embedding: Vec, +} + +#[derive(Serialize)] +pub struct ContradictionPair { + pub supporting: EvidenceNode, + pub refuting: EvidenceNode, +} + +#[derive(Serialize)] +pub struct ContradictionsResponse { + pub contradictions: Vec, +} + +pub async fn contradictions( + State(state): State>, + Json(req): Json, +) -> Result, StatusCode> { + let db = state.db.clone(); + let mut engine = ReasoningEngine::with_default_config(db); + + let pairs = engine + .find_contradictions(&req.topic_embedding) + .map_err(|_| StatusCode::INTERNAL_SERVER_ERROR)?; + + Ok(Json(ContradictionsResponse { + contradictions: pairs + .into_iter() + .map(|(s, r)| ContradictionPair { + supporting: s, + refuting: r, + }) + .collect(), + })) +} From 909c1577f1c5baaf3580355cd0aea3db28978754 Mon Sep 17 00:00:00 2001 From: Will Anderson Date: Wed, 29 Apr 2026 03:27:33 -0500 Subject: [PATCH 07/18] rename crates/ to engrams/, bindings/ to receptors/ MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit - crates/ → engrams/ (Rust engrams live here) - bindings/ → receptors/ (cross-language access points into the graph) - Cargo.toml workspace paths updated --- engram/Cargo.lock | 1 + engram/Cargo.toml | 24 +- engram/engram-data-tx-log/conf | 4 + engram/engram-data-tx-log/db | Bin 0 -> 524287 bytes .../engram-data-tx-log/snap.0000000000000060 | Bin 0 -> 69 bytes engram/engram-data/conf | 4 + engram/engram-data/db | Bin 0 -> 524287 bytes engram/engram-data/snap.0000000000035912 | Bin 0 -> 596 bytes .../engram-core/Cargo.toml | 1 + .../engram-core/src/activation.rs | 0 .../engram-core/src/consolidation.rs | 5 +- .../{crates => engrams}/engram-core/src/db.rs | 113 +- engram/engrams/engram-core/src/edge_type.rs | 443 +++++ .../engram-core/src/error.rs | 3 + .../engram-core/src/graph.rs | 24 +- .../engram-core/src/lib.rs | 8 +- .../engram-core/src/mem_storage.rs | 0 .../engram-core/src/migration.rs | 39 +- .../engram-core/src/salience.rs | 0 .../engram-core/src/storage.rs | 28 + .../engram-core/src/types.rs | 77 +- .../engram-core/src/vector.rs | 0 .../engram-crypto/Cargo.toml | 0 .../engram-crypto/src/algorithm.rs | 0 .../engram-crypto/src/engine.rs | 0 .../engram-crypto/src/error.rs | 0 .../engram-crypto/src/lib.rs | 0 .../engram-crypto/src/registry.rs | 0 .../{crates => engrams}/engram-ffi/Cargo.toml | 0 .../{crates => engrams}/engram-ffi/src/lib.rs | 0 .../{crates => engrams}/engram-jni/Cargo.toml | 0 .../{crates => engrams}/engram-jni/src/lib.rs | 0 .../engram-migrate/Cargo.toml | 0 .../engram-migrate/src/main.rs | 0 .../engram-projection/Cargo.toml | 0 .../engram-projection/src/engine.rs | 17 +- .../engram-projection/src/error.rs | 0 .../engram-projection/src/lib.rs | 0 .../engram-projection/src/registry.rs | 0 .../engram-projection/src/schema.rs | 0 .../engram-reasoning/Cargo.toml | 0 .../engram-reasoning/src/engine.rs | 35 +- .../engram-reasoning/src/lib.rs | 2 +- .../engram-reasoning/src/tests.rs | 14 +- .../engram-reasoning/src/types.rs | 0 .../engram-server/Cargo.toml | 0 .../engram-server/src/auth.rs | 0 .../engram-server/src/main.rs | 70 +- .../engram-server/src/routes/core.rs | 42 +- .../engram-server/src/routes/mod.rs | 0 .../engram-server/src/routes/projection.rs | 0 .../engram-server/src/routes/reasoning.rs | 0 .../engram-server/src/routes/swarm.rs | 0 .../engram-server/src/routes/sync.rs | 0 .../engram-server/src/routes/tx.rs | 0 .../engram-server/src/state.rs | 0 .../engram-sync/Cargo.toml | 0 .../engram-sync/src/client.rs | 0 .../engram-sync/src/engine.rs | 0 .../engram-sync/src/lib.rs | 0 .../engram-sync/src/types.rs | 0 .../{crates => engrams}/engram-tx/Cargo.toml | 0 .../engram-tx/src/command.rs | 0 .../engram-tx/src/engine.rs | 54 +- .../engram-tx/src/error.rs | 0 .../{crates => engrams}/engram-tx/src/lib.rs | 0 .../{crates => engrams}/engram-tx/src/log.rs | 0 engram/examples/basic.rs | 17 +- engram/{bindings => receptors}/go/README.md | 0 engram/{bindings => receptors}/go/engram.go | 0 engram/{bindings => receptors}/go/engram.h | 0 .../{bindings => receptors}/go/engram_test.go | 0 engram/{bindings => receptors}/go/go.mod | 0 .../{bindings => receptors}/kotlin/README.md | 0 .../kotlin/build.gradle.kts | 0 .../kotlin/settings.gradle.kts | 0 .../kotlin/ai/neuron/engram/ActivatedNode.kt | 0 .../main/kotlin/ai/neuron/engram/EngramDb.kt | 0 .../kotlin/ai/neuron/engram/EngramEdge.kt | 0 .../kotlin/ai/neuron/engram/EngramNode.kt | 0 .../kotlin/ai/neuron/engram/EngramTypes.kt | 0 .../typescript/Cargo.toml | 0 .../typescript/README.md | 0 .../typescript/package.json | 0 .../typescript/src/index.ts | 0 .../typescript/src/lib.rs | 0 .../typescript/src/types.ts | 0 .../typescript/tsconfig.json | 0 engram/studio/index.html | 1541 ++++++++++++++--- 89 files changed, 2114 insertions(+), 452 deletions(-) create mode 100644 engram/engram-data-tx-log/conf create mode 100644 engram/engram-data-tx-log/db create mode 100644 engram/engram-data-tx-log/snap.0000000000000060 create mode 100644 engram/engram-data/conf create mode 100644 engram/engram-data/db create mode 100644 engram/engram-data/snap.0000000000035912 rename engram/{crates => engrams}/engram-core/Cargo.toml (97%) rename engram/{crates => engrams}/engram-core/src/activation.rs (100%) rename engram/{crates => engrams}/engram-core/src/consolidation.rs (98%) rename engram/{crates => engrams}/engram-core/src/db.rs (79%) create mode 100644 engram/engrams/engram-core/src/edge_type.rs rename engram/{crates => engrams}/engram-core/src/error.rs (83%) rename engram/{crates => engrams}/engram-core/src/graph.rs (75%) rename engram/{crates => engrams}/engram-core/src/lib.rs (83%) rename engram/{crates => engrams}/engram-core/src/mem_storage.rs (100%) rename engram/{crates => engrams}/engram-core/src/migration.rs (92%) rename engram/{crates => engrams}/engram-core/src/salience.rs (100%) rename engram/{crates => engrams}/engram-core/src/storage.rs (84%) rename engram/{crates => engrams}/engram-core/src/types.rs (68%) rename engram/{crates => engrams}/engram-core/src/vector.rs (100%) rename engram/{crates => engrams}/engram-crypto/Cargo.toml (100%) rename engram/{crates => engrams}/engram-crypto/src/algorithm.rs (100%) rename engram/{crates => engrams}/engram-crypto/src/engine.rs (100%) rename engram/{crates => engrams}/engram-crypto/src/error.rs (100%) rename engram/{crates => engrams}/engram-crypto/src/lib.rs (100%) rename engram/{crates => engrams}/engram-crypto/src/registry.rs (100%) rename engram/{crates => engrams}/engram-ffi/Cargo.toml (100%) rename engram/{crates => engrams}/engram-ffi/src/lib.rs (100%) rename engram/{crates => engrams}/engram-jni/Cargo.toml (100%) rename engram/{crates => engrams}/engram-jni/src/lib.rs (100%) rename engram/{crates => engrams}/engram-migrate/Cargo.toml (100%) rename engram/{crates => engrams}/engram-migrate/src/main.rs (100%) rename engram/{crates => engrams}/engram-projection/Cargo.toml (100%) rename engram/{crates => engrams}/engram-projection/src/engine.rs (97%) rename engram/{crates => engrams}/engram-projection/src/error.rs (100%) rename engram/{crates => engrams}/engram-projection/src/lib.rs (100%) rename engram/{crates => engrams}/engram-projection/src/registry.rs (100%) rename engram/{crates => engrams}/engram-projection/src/schema.rs (100%) rename engram/{crates => engrams}/engram-reasoning/Cargo.toml (100%) rename engram/{crates => engrams}/engram-reasoning/src/engine.rs (96%) rename engram/{crates => engrams}/engram-reasoning/src/lib.rs (99%) rename engram/{crates => engrams}/engram-reasoning/src/tests.rs (98%) rename engram/{crates => engrams}/engram-reasoning/src/types.rs (100%) rename engram/{crates => engrams}/engram-server/Cargo.toml (100%) rename engram/{crates => engrams}/engram-server/src/auth.rs (100%) rename engram/{crates => engrams}/engram-server/src/main.rs (74%) rename engram/{crates => engrams}/engram-server/src/routes/core.rs (84%) rename engram/{crates => engrams}/engram-server/src/routes/mod.rs (100%) rename engram/{crates => engrams}/engram-server/src/routes/projection.rs (100%) rename engram/{crates => engrams}/engram-server/src/routes/reasoning.rs (100%) rename engram/{crates => engrams}/engram-server/src/routes/swarm.rs (100%) rename engram/{crates => engrams}/engram-server/src/routes/sync.rs (100%) rename engram/{crates => engrams}/engram-server/src/routes/tx.rs (100%) rename engram/{crates => engrams}/engram-server/src/state.rs (100%) rename engram/{crates => engrams}/engram-sync/Cargo.toml (100%) rename engram/{crates => engrams}/engram-sync/src/client.rs (100%) rename engram/{crates => engrams}/engram-sync/src/engine.rs (100%) rename engram/{crates => engrams}/engram-sync/src/lib.rs (100%) rename engram/{crates => engrams}/engram-sync/src/types.rs (100%) rename engram/{crates => engrams}/engram-tx/Cargo.toml (100%) rename engram/{crates => engrams}/engram-tx/src/command.rs (100%) rename engram/{crates => engrams}/engram-tx/src/engine.rs (93%) rename engram/{crates => engrams}/engram-tx/src/error.rs (100%) rename engram/{crates => engrams}/engram-tx/src/lib.rs (100%) rename engram/{crates => engrams}/engram-tx/src/log.rs (100%) rename engram/{bindings => receptors}/go/README.md (100%) rename engram/{bindings => receptors}/go/engram.go (100%) rename engram/{bindings => receptors}/go/engram.h (100%) rename engram/{bindings => receptors}/go/engram_test.go (100%) rename engram/{bindings => receptors}/go/go.mod (100%) rename engram/{bindings => receptors}/kotlin/README.md (100%) rename engram/{bindings => receptors}/kotlin/build.gradle.kts (100%) rename engram/{bindings => receptors}/kotlin/settings.gradle.kts (100%) rename engram/{bindings => receptors}/kotlin/src/main/kotlin/ai/neuron/engram/ActivatedNode.kt (100%) rename engram/{bindings => receptors}/kotlin/src/main/kotlin/ai/neuron/engram/EngramDb.kt (100%) rename engram/{bindings => receptors}/kotlin/src/main/kotlin/ai/neuron/engram/EngramEdge.kt (100%) rename engram/{bindings => receptors}/kotlin/src/main/kotlin/ai/neuron/engram/EngramNode.kt (100%) rename engram/{bindings => receptors}/kotlin/src/main/kotlin/ai/neuron/engram/EngramTypes.kt (100%) rename engram/{bindings => receptors}/typescript/Cargo.toml (100%) rename engram/{bindings => receptors}/typescript/README.md (100%) rename engram/{bindings => receptors}/typescript/package.json (100%) rename engram/{bindings => receptors}/typescript/src/index.ts (100%) rename engram/{bindings => receptors}/typescript/src/lib.rs (100%) rename engram/{bindings => receptors}/typescript/src/types.ts (100%) rename engram/{bindings => receptors}/typescript/tsconfig.json (100%) diff --git a/engram/Cargo.lock b/engram/Cargo.lock index 0ec3e61..9851f11 100644 --- a/engram/Cargo.lock +++ b/engram/Cargo.lock @@ -526,6 +526,7 @@ dependencies = [ "instant-distance", "rusqlite", "serde", + "serde_json", "sled", "tempfile", "thiserror 1.0.69", diff --git a/engram/Cargo.toml b/engram/Cargo.toml index 8738c4d..0422c6e 100644 --- a/engram/Cargo.toml +++ b/engram/Cargo.toml @@ -1,17 +1,17 @@ [workspace] resolver = "2" members = [ - "crates/engram-core", - "crates/engram-ffi", - "crates/engram-jni", - "crates/engram-migrate", - "crates/engram-sync", - "crates/engram-server", - "crates/engram-projection", - "crates/engram-tx", - "crates/engram-crypto", - "crates/engram-reasoning", - # engram-wasm is in bindings/ and compiled separately via wasm-pack + "engrams/engram-core", + "engrams/engram-ffi", + "engrams/engram-jni", + "engrams/engram-migrate", + "engrams/engram-sync", + "engrams/engram-server", + "engrams/engram-projection", + "engrams/engram-tx", + "engrams/engram-crypto", + "engrams/engram-reasoning", + # 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a/engram/crates/engram-core/Cargo.toml +++ b/engram/engrams/engram-core/Cargo.toml @@ -15,6 +15,7 @@ migration = ["dep:rusqlite"] sled = { version = "0.34", optional = true } uuid = { version = "1", features = ["v4", "serde"] } serde = { version = "1", features = ["derive"] } +serde_json = "1" bincode = "1" anyhow = "1" thiserror = "1" diff --git a/engram/crates/engram-core/src/activation.rs b/engram/engrams/engram-core/src/activation.rs similarity index 100% rename from engram/crates/engram-core/src/activation.rs rename to engram/engrams/engram-core/src/activation.rs diff --git a/engram/crates/engram-core/src/consolidation.rs b/engram/engrams/engram-core/src/consolidation.rs similarity index 98% rename from engram/crates/engram-core/src/consolidation.rs rename to engram/engrams/engram-core/src/consolidation.rs index 231a7d4..8ab02a5 100644 --- a/engram/crates/engram-core/src/consolidation.rs +++ b/engram/engrams/engram-core/src/consolidation.rs @@ -88,8 +88,9 @@ pub fn consolidate(db: &Db, config: &ConsolidationConfig) -> EngramResult= config.salience_floor { // Promote: change tier to Semantic and persist. + // Use overwrite_node — this is an internal state update, not a new node. node.tier = MemoryTier::Semantic; - graph::put_node(db, &node)?; + graph::overwrite_node(db, &node)?; promoted_count += 1; if promoted_count >= config.max_promotions_per_run { @@ -108,7 +109,7 @@ pub fn consolidate(db: &Db, config: &ConsolidationConfig) -> EngramResult Self { + Self { db: self.db.clone() } + } + } + impl EngramDb { /// Open (or create) an engram database at the given path. + /// + /// Seeds all built-in edge types on first open. Idempotent — existing + /// definitions are not overwritten on subsequent opens. pub fn open(path: &Path) -> EngramResult { let db = sled::open(path)?; + edge_type::seed_builtin_types(&db)?; Ok(Self { db }) } // ── Node operations ─────────────────────────────────────────────────── - /// Persist a node. Returns the node's UUID. + /// Persist a new node. Returns the node's UUID. + /// + /// Returns `EngramError::NodeAlreadyExists` if the ID already exists. + /// Nodes are immutable — to update, create a new node and add a + /// `supersedes` edge from new → old. pub fn put_node(&self, node: Node) -> EngramResult { let id = graph::put_node(&self.db, &node)?; // Mark HNSW index dirty so next search rebuilds it. @@ -109,15 +126,90 @@ mod sled_impl { // ── Graph traversal ─────────────────────────────────────────────────── /// BFS traversal from `from`, following edges up to `max_depth` hops. + /// + /// If `relation` is `Some("causes")`, only edges with that relation + /// name are followed. Pass `None` to follow all edges. pub fn traverse( &self, from: Uuid, - relation: Option, + relation: Option<&str>, max_depth: u8, ) -> EngramResult> { graph::traverse(&self.db, from, relation, max_depth) } + // ── Edge type registry (native bindings for el) ─────────────────────── + // + // These are the el-callable surfaces. All intelligence about when to + // create types, how to score confidence, and when to merge/split lives + // in el. Rust stores and retrieves. + + /// Create or update an edge type. If the type already exists its + /// description and confidence are updated; id, first_observed, + /// instance_count, derived_from, supersedes, and deprecated are preserved. + pub fn native_edge_type_put( + &self, + name: &str, + description: &str, + confidence: f32, + ) -> EngramResult<()> { + let confidence = confidence.clamp(0.0, 1.0); + if let Some(mut existing) = edge_type::get_edge_type(&self.db, name)? { + existing.description = description.to_string(); + existing.confidence = confidence; + edge_type::register_edge_type(&self.db, &existing)?; + } else { + let def = EdgeTypeDef { + id: Uuid::new_v4(), + name: name.to_string(), + description: description.to_string(), + first_observed: now_ms(), + instance_count: 0, + confidence, + derived_from: None, + supersedes: None, + deprecated: false, + }; + edge_type::register_edge_type(&self.db, &def)?; + } + Ok(()) + } + + /// Retrieve an edge type as a JSON string. Returns empty string if not found. + pub fn native_edge_type_get(&self, name: &str) -> EngramResult { + match edge_type::get_edge_type(&self.db, name)? { + Some(def) => Ok(serde_json::to_string(&def).unwrap_or_default()), + None => Ok(String::new()), + } + } + + /// List all registered edge types as a JSON array string. + pub fn native_edge_type_list(&self) -> EngramResult { + let defs = edge_type::all_edge_types(&self.db)?; + Ok(serde_json::to_string(&defs).unwrap_or_default()) + } + + /// Increment the instance_count for a named edge type by one. + pub fn native_edge_type_increment_count(&self, name: &str) -> EngramResult<()> { + edge_type::increment_edge_type_count(&self.db, name) + } + + /// Update the description and confidence of an existing edge type. + /// instance_count, id, first_observed, and other metadata are preserved. + pub fn native_edge_type_update( + &self, + name: &str, + description: &str, + confidence: f32, + ) -> EngramResult<()> { + if let Some(mut def) = edge_type::get_edge_type(&self.db, name)? { + def.description = description.to_string(); + def.confidence = confidence.clamp(0.0, 1.0); + edge_type::register_edge_type(&self.db, &def)?; + } + Ok(()) + } + // ── Salience management ─────────────────────────────────────────────── /// Mark a node as recently activated — update last_activated, increment @@ -132,7 +224,8 @@ mod sled_impl { node.last_activated, node.activation_count, ); - graph::put_node(&self.db, &node)?; + // Use overwrite_node — touch is an internal state update, not a new node. + graph::overwrite_node(&self.db, &node)?; Ok(()) } @@ -154,7 +247,7 @@ mod sled_impl { if new_salience != node.salience { node.salience = new_salience; storage::write_salience(&self.db, node.id, new_salience)?; - graph::put_node(&self.db, &node)?; + graph::overwrite_node(&self.db, &node)?; count += 1; } } @@ -226,9 +319,9 @@ mod wasm_impl { use crate::error::{EngramError, EngramResult}; use crate::mem_storage::MemStore; use crate::salience; - use crate::types::{ActivatedNode, Edge, Node, RelationType, ScoredNode}; + use crate::types::{ActivatedNode, Edge, Node, ScoredNode}; use crate::vector; - use std::collections::{BinaryHeap, HashMap, HashSet, VecDeque}; + use std::collections::{HashMap, HashSet, VecDeque}; use std::sync::RwLock; use uuid::Uuid; @@ -332,7 +425,7 @@ mod wasm_impl { pub fn traverse( &self, from: Uuid, - relation: Option, + relation: Option<&str>, max_depth: u8, ) -> EngramResult> { let store = self @@ -352,8 +445,8 @@ mod wasm_impl { } let edges = store.read_edges_from(current_id)?; for edge in edges { - if let Some(ref rel) = relation { - if &edge.relation != rel { + if let Some(rel) = relation { + if edge.relation != rel { continue; } } diff --git a/engram/engrams/engram-core/src/edge_type.rs b/engram/engrams/engram-core/src/edge_type.rs new file mode 100644 index 0000000..81c9819 --- /dev/null +++ b/engram/engrams/engram-core/src/edge_type.rs @@ -0,0 +1,443 @@ +/// Edge type registry — dynamic, first-class edge type management. +/// +/// Edge types are stored under the key prefix `edge_types:` in the sled +/// database. Each value is a bincode-encoded `EdgeTypeDef`. +/// +/// # Operations +/// +/// - `register_edge_type` — create or update a type definition +/// - `get_edge_type` — look up by name +/// - `update_edge_type_description` — change the human-readable description +/// - `increment_edge_type_count` — bump the instance counter when a new edge is created +/// - `merge_edge_types` — retag all edges from one type to another and deprecate the source +/// - `split_edge_type` — record a split operation; the predicate is stored as a description note +/// - `deprecate_edge_type` — mark a type as no longer current +/// - `all_edge_types` — return every registered type +/// - `edge_types_by_confidence` — filter by minimum confidence score + +use crate::error::EngramResult; +use crate::storage; +use crate::types::{now_ms, Edge, EdgeTypeDef}; +use sled::Db; +use uuid::Uuid; + +// ── Key helpers ─────────────────────────────────────────────────────────────── + +fn edge_type_key(name: &str) -> Vec { + format!("edge_types:{}", name).into_bytes() +} + +const EDGE_TYPE_PREFIX: &[u8] = b"edge_types:"; + +// ── Public API ──────────────────────────────────────────────────────────────── + +/// Register a new edge type, or overwrite an existing definition. +/// +/// Returns the UUID of the stored `EdgeTypeDef`. +pub fn register_edge_type(db: &Db, def: &EdgeTypeDef) -> EngramResult { + let key = edge_type_key(&def.name); + let val = bincode::serialize(def)?; + db.insert(key, val)?; + Ok(def.id) +} + +/// Look up an edge type by its canonical name. +pub fn get_edge_type(db: &Db, name: &str) -> EngramResult> { + match db.get(edge_type_key(name))? { + Some(bytes) => Ok(Some(bincode::deserialize(&bytes)?)), + None => Ok(None), + } +} + +/// Update the human-readable description of an existing edge type. +/// +/// No-ops silently if the type does not exist. +pub fn update_edge_type_description(db: &Db, name: &str, description: &str) -> EngramResult<()> { + if let Some(mut def) = get_edge_type(db, name)? { + def.description = description.to_string(); + let val = bincode::serialize(&def)?; + db.insert(edge_type_key(name), val)?; + } + Ok(()) +} + +/// Increment the instance counter for an edge type. +/// +/// Called whenever a new edge with this type is persisted. No-ops if the type +/// is not registered (the counter stays in-registry, not in the edge itself). +pub fn increment_edge_type_count(db: &Db, name: &str) -> EngramResult<()> { + if let Some(mut def) = get_edge_type(db, name)? { + def.instance_count = def.instance_count.saturating_add(1); + let val = bincode::serialize(&def)?; + db.insert(edge_type_key(name), val)?; + } + Ok(()) +} + +/// Merge two edge types: retag all edges from `from_name` to `into_name`, +/// then deprecate `from_name`. +/// +/// After this call every edge that carried `from_name` will carry `into_name` +/// instead. The `from_name` definition is marked deprecated and its `supersedes` +/// field records the merge destination. +pub fn merge_edge_types(db: &Db, from_name: &str, into_name: &str) -> EngramResult<()> { + // Collect and retag every edge carrying from_name + let prefix = b"edges:from:"; + let mut edges_to_retag: Vec = Vec::new(); + for result in db.scan_prefix(prefix) { + let (_k, v) = result?; + let edge: Edge = bincode::deserialize(&v)?; + if edge.relation == from_name { + edges_to_retag.push(edge); + } + } + + for mut edge in edges_to_retag { + edge.relation = into_name.to_string(); + storage::write_edge(db, &edge)?; + } + + // Deprecate the source type and record the merge destination + if let Some(mut def) = get_edge_type(db, from_name)? { + def.deprecated = true; + def.supersedes = Some(into_name.to_string()); + let val = bincode::serialize(&def)?; + db.insert(edge_type_key(from_name), val)?; + } + + // Update instance count on the destination to account for the absorbed edges + if let Some(mut into_def) = get_edge_type(db, into_name)? { + // Recount from graph (simple: scan all edges for into_name) + let mut count = 0u64; + for result in db.scan_prefix(prefix) { + let (_k, v) = result?; + let edge: Edge = bincode::deserialize(&v)?; + if edge.relation == into_name { + count += 1; + } + } + into_def.instance_count = count; + let val = bincode::serialize(&into_def)?; + db.insert(edge_type_key(into_name), val)?; + } + + Ok(()) +} + +/// Record a split of `name` into `new_name_a` and `new_name_b`. +/// +/// The predicate that drives the split is stored as a descriptive note on +/// both new types. This does NOT automatically retag edges — the caller is +/// responsible for deciding which edges go to `new_name_a` vs `new_name_b` +/// and calling `storage::write_edge` for each. The split records the intent; +/// the actual retagging is domain-specific. +/// +/// The original type is deprecated with a note referencing the two successors. +pub fn split_edge_type( + db: &Db, + name: &str, + new_name_a: &str, + new_name_b: &str, + predicate: &str, +) -> EngramResult<()> { + let now = now_ms(); + + // Deprecate the original + if let Some(mut original) = get_edge_type(db, name)? { + original.deprecated = true; + original.description = format!( + "{} [SPLIT into '{}' and '{}' via predicate: {}]", + original.description, new_name_a, new_name_b, predicate + ); + let val = bincode::serialize(&original)?; + db.insert(edge_type_key(name), val)?; + } + + // Register new_name_a if it doesn't already exist + if get_edge_type(db, new_name_a)?.is_none() { + let def_a = EdgeTypeDef { + id: Uuid::new_v4(), + name: new_name_a.to_string(), + description: format!( + "Split from '{}' — predicate: {}", + name, predicate + ), + first_observed: now, + instance_count: 0, + confidence: 0.0, + derived_from: Some(format!("split from '{}'", name)), + supersedes: None, + deprecated: false, + }; + register_edge_type(db, &def_a)?; + } + + // Register new_name_b if it doesn't already exist + if get_edge_type(db, new_name_b)?.is_none() { + let def_b = EdgeTypeDef { + id: Uuid::new_v4(), + name: new_name_b.to_string(), + description: format!( + "Split from '{}' — predicate: {}", + name, predicate + ), + first_observed: now, + instance_count: 0, + confidence: 0.0, + derived_from: Some(format!("split from '{}'", name)), + supersedes: None, + deprecated: false, + }; + register_edge_type(db, &def_b)?; + } + + Ok(()) +} + +/// Mark an edge type as deprecated. Deprecated types should not be used on +/// new edges, but existing edges carrying this type remain valid. +pub fn deprecate_edge_type(db: &Db, name: &str) -> EngramResult<()> { + if let Some(mut def) = get_edge_type(db, name)? { + def.deprecated = true; + let val = bincode::serialize(&def)?; + db.insert(edge_type_key(name), val)?; + } + Ok(()) +} + +/// Return all registered edge type definitions. +pub fn all_edge_types(db: &Db) -> EngramResult> { + let mut types = Vec::new(); + for result in db.scan_prefix(EDGE_TYPE_PREFIX) { + let (_k, v) = result?; + let def: EdgeTypeDef = bincode::deserialize(&v)?; + types.push(def); + } + Ok(types) +} + +/// Return all edge types with a confidence score at or above `min_confidence`. +pub fn edge_types_by_confidence(db: &Db, min_confidence: f32) -> EngramResult> { + let mut types = all_edge_types(db)?; + types.retain(|t| t.confidence >= min_confidence); + types.sort_by(|a, b| b.confidence.partial_cmp(&a.confidence).unwrap_or(std::cmp::Ordering::Equal)); + Ok(types) +} + +// ── Built-in type seed ──────────────────────────────────────────────────────── + +/// Register all built-in edge types if they have not already been registered. +/// +/// Called once from `EngramDb::open`. Idempotent — existing definitions are +/// not overwritten, so user customisations survive restarts. +pub fn seed_builtin_types(db: &Db) -> EngramResult<()> { + let now = now_ms(); + + // Original relational types — confidence 1.0 (canonical, well-established) + let originals: &[(&str, &str)] = &[ + ("supersedes", "This node replaces or obsoletes another"), + ("causes", "This node is a causal precursor to another"), + ("contains", "This node hierarchically contains another"), + ("references", "This node cites another as supporting context"), + ("contradicts", "This node is in logical tension with another"), + ("exemplifies", "This node is a concrete instance of a more abstract node"), + ("activates", "Co-activation: firing this tends to fire the other"), + ("temporally_precedes", "Temporal ordering: this node came before the other"), + ]; + + for (name, description) in originals { + if get_edge_type(db, name)?.is_none() { + let def = EdgeTypeDef { + id: Uuid::new_v4(), + name: name.to_string(), + description: description.to_string(), + first_observed: now, + instance_count: 0, + confidence: 1.0, + derived_from: None, + supersedes: None, + deprecated: false, + }; + register_edge_type(db, &def)?; + } + } + + // Personhood / relational types — confidence 0.9 (well-understood but newer) + let personhood: &[(&str, &str)] = &[ + ("grounded_in", "This value or belief is rooted in this experience"), + ("reinforced_by", "This pattern kept being confirmed by this"), + ("derives_from", "This preference or belief flows from this value"), + ("in_tension_with", "These two things pull against each other"), + ("expressed_through","This value surfaces in this voice or behavior"), + ("shaped_by", "This pattern was formed by this relationship or experience"), + ("challenged_by", "This belief was tested by this experience"), + ("resonates_with", "This memory echoes this value"), + ]; + + for (name, description) in personhood { + if get_edge_type(db, name)?.is_none() { + let def = EdgeTypeDef { + id: Uuid::new_v4(), + name: name.to_string(), + description: description.to_string(), + first_observed: now, + instance_count: 0, + confidence: 0.9, + derived_from: None, + supersedes: None, + deprecated: false, + }; + register_edge_type(db, &def)?; + } + } + + Ok(()) +} + +// ── Tests ───────────────────────────────────────────────────────────────────── + +#[cfg(test)] +mod tests { + use super::*; + + fn open_tmp() -> (Db, tempfile::TempDir) { + let dir = tempfile::tempdir().unwrap(); + let db = sled::open(dir.path()).unwrap(); + (db, dir) + } + + #[test] + fn register_and_retrieve() { + let (db, _dir) = open_tmp(); + let def = EdgeTypeDef { + id: Uuid::new_v4(), + name: "causes".to_string(), + description: "A causes B".to_string(), + first_observed: 0, + instance_count: 0, + confidence: 1.0, + derived_from: None, + supersedes: None, + deprecated: false, + }; + register_edge_type(&db, &def).unwrap(); + let got = get_edge_type(&db, "causes").unwrap().unwrap(); + assert_eq!(got.name, "causes"); + assert!((got.confidence - 1.0).abs() < f32::EPSILON); + } + + #[test] + fn update_description() { + let (db, _dir) = open_tmp(); + let def = EdgeTypeDef { + id: Uuid::new_v4(), + name: "test_type".to_string(), + description: "old".to_string(), + first_observed: 0, + instance_count: 0, + confidence: 0.5, + derived_from: None, + supersedes: None, + deprecated: false, + }; + register_edge_type(&db, &def).unwrap(); + update_edge_type_description(&db, "test_type", "new description").unwrap(); + let got = get_edge_type(&db, "test_type").unwrap().unwrap(); + assert_eq!(got.description, "new description"); + } + + #[test] + fn increment_count() { + let (db, _dir) = open_tmp(); + let def = EdgeTypeDef { + id: Uuid::new_v4(), + name: "references".to_string(), + description: "refs".to_string(), + first_observed: 0, + instance_count: 5, + confidence: 1.0, + derived_from: None, + supersedes: None, + deprecated: false, + }; + register_edge_type(&db, &def).unwrap(); + increment_edge_type_count(&db, "references").unwrap(); + let got = get_edge_type(&db, "references").unwrap().unwrap(); + assert_eq!(got.instance_count, 6); + } + + #[test] + fn deprecate() { + let (db, _dir) = open_tmp(); + let def = EdgeTypeDef { + id: Uuid::new_v4(), + name: "old_type".to_string(), + description: "going away".to_string(), + first_observed: 0, + instance_count: 0, + confidence: 0.3, + derived_from: None, + supersedes: None, + deprecated: false, + }; + register_edge_type(&db, &def).unwrap(); + deprecate_edge_type(&db, "old_type").unwrap(); + let got = get_edge_type(&db, "old_type").unwrap().unwrap(); + assert!(got.deprecated); + } + + #[test] + fn all_types_and_confidence_filter() { + let (db, _dir) = open_tmp(); + seed_builtin_types(&db).unwrap(); + + let all = all_edge_types(&db).unwrap(); + assert!(all.len() >= 16); // 8 originals + 8 personhood + + // All original types have confidence 1.0 + let high = edge_types_by_confidence(&db, 1.0).unwrap(); + assert!(high.len() >= 8); + for t in &high { + assert!((t.confidence - 1.0).abs() < f32::EPSILON); + } + + // personhood types have confidence 0.9 — included when threshold is <= 0.9 + let wide = edge_types_by_confidence(&db, 0.9).unwrap(); + assert!(wide.len() >= 16); + } + + #[test] + fn seed_is_idempotent() { + let (db, _dir) = open_tmp(); + seed_builtin_types(&db).unwrap(); + seed_builtin_types(&db).unwrap(); // second call must not panic or duplicate + let all = all_edge_types(&db).unwrap(); + // All names should be distinct + let mut names: Vec = all.iter().map(|t| t.name.clone()).collect(); + names.sort(); + names.dedup(); + assert_eq!(names.len(), all.len()); + } + + #[test] + fn split_type_records_both_halves() { + let (db, _dir) = open_tmp(); + let original = EdgeTypeDef { + id: Uuid::new_v4(), + name: "relates_to".to_string(), + description: "generic relation".to_string(), + first_observed: 0, + instance_count: 0, + confidence: 0.5, + derived_from: None, + supersedes: None, + deprecated: false, + }; + register_edge_type(&db, &original).unwrap(); + split_edge_type(&db, "relates_to", "causes", "references", "directionality").unwrap(); + let orig = get_edge_type(&db, "relates_to").unwrap().unwrap(); + assert!(orig.deprecated); + assert!(get_edge_type(&db, "causes").unwrap().is_some()); + assert!(get_edge_type(&db, "references").unwrap().is_some()); + } +} diff --git a/engram/crates/engram-core/src/error.rs b/engram/engrams/engram-core/src/error.rs similarity index 83% rename from engram/crates/engram-core/src/error.rs rename to engram/engrams/engram-core/src/error.rs index f661ed7..9ba4ce7 100644 --- a/engram/crates/engram-core/src/error.rs +++ b/engram/engrams/engram-core/src/error.rs @@ -11,6 +11,9 @@ pub enum EngramError { #[error("Node not found: {0}")] NotFound(uuid::Uuid), + #[error("Node already exists: {0} — nodes are immutable; supersede via edge")] + NodeAlreadyExists(uuid::Uuid), + #[error("Invalid embedding: expected {expected} dimensions, got {got}")] DimensionMismatch { expected: usize, got: usize }, diff --git a/engram/crates/engram-core/src/graph.rs b/engram/engrams/engram-core/src/graph.rs similarity index 75% rename from engram/crates/engram-core/src/graph.rs rename to engram/engrams/engram-core/src/graph.rs index a1ec1d1..e3cce4c 100644 --- a/engram/crates/engram-core/src/graph.rs +++ b/engram/engrams/engram-core/src/graph.rs @@ -4,17 +4,25 @@ /// in both directions so that forward and backward traversals are equally cheap. use crate::error::EngramResult; use crate::storage; -use crate::types::{Edge, Node, RelationType}; +use crate::types::{Edge, Node}; use sled::Db; use std::collections::{HashSet, VecDeque}; use uuid::Uuid; -/// Persist a node and its embedding. Overwrites any existing node with the same id. +/// Persist a new node and its embedding. Enforces node immutability — returns +/// `EngramError::NodeAlreadyExists` if the ID is already in the store. pub fn put_node(db: &Db, node: &Node) -> EngramResult { storage::write_node(db, node)?; Ok(node.id) } +/// Overwrite a node unconditionally. Used internally for salience/tier mutations +/// (touch, decay, consolidation). Do NOT call this for user-visible node creation. +pub fn overwrite_node(db: &Db, node: &Node) -> EngramResult { + storage::overwrite_node(db, node)?; + Ok(node.id) +} + /// Retrieve a node by id. Returns None if not found. pub fn get_node(db: &Db, id: Uuid) -> EngramResult> { storage::read_node(db, id) @@ -37,13 +45,13 @@ pub fn edges_to(db: &Db, to_id: Uuid) -> EngramResult> { /// Breadth-first traversal starting from `from`, following forward edges only. /// -/// If `relation` is Some, only edges of that type are followed. -/// The BFS respects `max_depth` hops. The seed node itself is NOT included. -/// Visited nodes are deduplicated. +/// If `relation` is `Some(&str)`, only edges whose `relation` field matches +/// that string are followed. The BFS respects `max_depth` hops. The seed node +/// itself is NOT included. Visited nodes are deduplicated. pub fn traverse( db: &Db, from: Uuid, - relation: Option, + relation: Option<&str>, max_depth: u8, ) -> EngramResult> { let mut visited: HashSet = HashSet::new(); @@ -60,8 +68,8 @@ pub fn traverse( let edges = edges_from(db, current_id)?; for edge in edges { // Filter by relation type if specified - if let Some(ref rel) = relation { - if &edge.relation != rel { + if let Some(rel) = relation { + if edge.relation != rel { continue; } } diff --git a/engram/crates/engram-core/src/lib.rs b/engram/engrams/engram-core/src/lib.rs similarity index 83% rename from engram/crates/engram-core/src/lib.rs rename to engram/engrams/engram-core/src/lib.rs index 0404456..bf86d97 100644 --- a/engram/crates/engram-core/src/lib.rs +++ b/engram/engrams/engram-core/src/lib.rs @@ -8,7 +8,7 @@ /// # Quick Start /// /// ```rust,no_run -/// use engram_core::{EngramDb, Node, Edge, NodeType, MemoryTier, RelationType}; +/// use engram_core::{EngramDb, Node, Edge, NodeType, MemoryTier, EDGE_SUPERSEDES}; /// use std::path::Path; /// /// let db = EngramDb::open(Path::new("/tmp/my-engram")).unwrap(); @@ -32,6 +32,8 @@ pub mod activation; pub mod consolidation; pub mod db; +#[cfg(not(feature = "wasm"))] +pub mod edge_type; pub mod error; pub mod graph; pub mod salience; @@ -48,6 +50,8 @@ pub mod migration; pub use db::EngramDb; pub use error::{EngramError, EngramResult}; pub use types::{ - ActivatedNode, Edge, MemoryTier, Node, NodeType, RelationType, ScoredNode, now_ms, + ActivatedNode, Edge, EdgeTypeDef, MemoryTier, Node, NodeType, ScoredNode, now_ms, + EDGE_ACTIVATES, EDGE_CAUSES, EDGE_CONTAINS, EDGE_CONTRADICTS, EDGE_EXEMPLIFIES, + EDGE_REFERENCES, EDGE_SUPERSEDES, EDGE_TEMPORALLY_PRECEDES, }; pub use consolidation::{ConsolidationConfig, ConsolidationReport}; diff --git a/engram/crates/engram-core/src/mem_storage.rs b/engram/engrams/engram-core/src/mem_storage.rs similarity index 100% rename from engram/crates/engram-core/src/mem_storage.rs rename to engram/engrams/engram-core/src/mem_storage.rs diff --git a/engram/crates/engram-core/src/migration.rs b/engram/engrams/engram-core/src/migration.rs similarity index 92% rename from engram/crates/engram-core/src/migration.rs rename to engram/engrams/engram-core/src/migration.rs index 016e708..1c5aa93 100644 --- a/engram/crates/engram-core/src/migration.rs +++ b/engram/engrams/engram-core/src/migration.rs @@ -10,9 +10,8 @@ /// | `memory_nodes` | `Node { tier: Episodic, node_type: Memory }` | /// | `knowledge_entries` | `Node { tier: Semantic, node_type: Concept }` | /// -/// Edges from `graph_edges` (type = "supersedes" or "Supersedes") are converted -/// to `Edge { relation: RelationType::Supersedes }`. Other edge types become -/// `RelationType::References`. +/// Edges from `graph_edges` are converted using their `edge_type` string directly +/// (normalised to lowercase). Unknown types map to `"references"`. /// /// # Embeddings /// @@ -23,7 +22,7 @@ /// TODO: wire in real embeddings from all-MiniLM-L6-v2 via the ONNX runtime. use crate::error::{EngramError, EngramResult}; -use crate::types::{Edge, MemoryTier, Node, NodeType, RelationType}; +use crate::types::{Edge, MemoryTier, Node, NodeType}; use rusqlite::{Connection, OpenFlags}; use std::collections::HashMap; use std::path::PathBuf; @@ -227,7 +226,7 @@ pub fn migrate_from_neuron(config: &MigrationConfig) -> EngramResult continue, }; - let relation = edge_type_to_relation(&edge_type); + let relation = normalise_edge_type(&edge_type); let edge = Edge::new(from_uuid, to_uuid, relation, weight as f32); match engram_db.put_edge(edge) { @@ -265,18 +264,22 @@ fn importance_string_to_f32(importance: &str) -> f32 { } } -/// Convert a Neuron edge type string to an Engram RelationType. -fn edge_type_to_relation(edge_type: &str) -> RelationType { +/// Normalise a Neuron edge type string to a canonical Engram edge type name. +/// +/// Known variants (including old PascalCase forms from the Rust enum era) are +/// mapped to their lowercase canonical names. Unknown types fall back to +/// `"references"` as a safe, non-destructive default. +fn normalise_edge_type(edge_type: &str) -> &'static str { match edge_type.to_lowercase().as_str() { - "supersedes" | "superseded_by" => RelationType::Supersedes, - "causes" | "caused_by" => RelationType::Causes, - "contains" | "contained_by" => RelationType::Contains, - "references" | "referenced_by" => RelationType::References, - "contradicts" => RelationType::Contradicts, - "exemplifies" | "exemplified_by" => RelationType::Exemplifies, - "activates" => RelationType::Activates, - "temporally_precedes" | "follows" => RelationType::TemporallyPrecedes, - _ => RelationType::References, // safe default + "supersedes" | "superseded_by" => "supersedes", + "causes" | "caused_by" => "causes", + "contains" | "contained_by" => "contains", + "references" | "referenced_by" => "references", + "contradicts" => "contradicts", + "exemplifies" | "exemplified_by" => "exemplifies", + "activates" => "activates", + "temporally_precedes" | "temporallyprecedes" | "follows" => "temporally_precedes", + _ => "references", // safe default } } @@ -340,12 +343,12 @@ mod tests { #[test] fn edge_type_supersedes() { - assert_eq!(edge_type_to_relation("supersedes"), RelationType::Supersedes); + assert_eq!(normalise_edge_type("supersedes"), "supersedes"); } #[test] fn edge_type_unknown_is_references() { - assert_eq!(edge_type_to_relation("foobar"), RelationType::References); + assert_eq!(normalise_edge_type("foobar"), "references"); } #[test] diff --git a/engram/crates/engram-core/src/salience.rs b/engram/engrams/engram-core/src/salience.rs similarity index 100% rename from engram/crates/engram-core/src/salience.rs rename to engram/engrams/engram-core/src/salience.rs diff --git a/engram/crates/engram-core/src/storage.rs b/engram/engrams/engram-core/src/storage.rs similarity index 84% rename from engram/crates/engram-core/src/storage.rs rename to engram/engrams/engram-core/src/storage.rs index f8ea09e..95b368c 100644 --- a/engram/crates/engram-core/src/storage.rs +++ b/engram/engrams/engram-core/src/storage.rs @@ -6,6 +6,7 @@ /// edges:to:{to}:{from} → reverse index (same Edge bytes) /// vectors:{uuid} → raw little-endian f32 bytes /// salience:{uuid} → 4-byte little-endian f32 +/// edge_types:{name} → bincode-encoded EdgeTypeDef (managed by edge_type.rs) use crate::error::{EngramError, EngramResult}; use crate::types::{Edge, Node}; use sled::Db; @@ -35,8 +36,19 @@ pub fn salience_key(id: Uuid) -> Vec { // ── Node storage ───────────────────────────────────────────────────────────── +/// Persist a node. Returns `EngramError::NodeAlreadyExists` if a node with +/// this ID already exists in the store. +/// +/// Nodes are immutable and append-only. To update, create a new node and +/// connect it to the old with a `supersedes` edge. pub fn write_node(db: &Db, node: &Node) -> EngramResult<()> { let key = node_key(node.id); + + // Immutability guard — reject writes to existing node IDs. + if db.contains_key(&key)? { + return Err(EngramError::NodeAlreadyExists(node.id)); + } + let val = bincode::serialize(node)?; db.insert(key, val)?; @@ -52,6 +64,22 @@ pub fn write_node(db: &Db, node: &Node) -> EngramResult<()> { Ok(()) } +/// Overwrite a node unconditionally. Used internally for salience/tier updates +/// that must mutate in-place (touch, decay, consolidation). +/// +/// Do NOT expose this in public API — callers should use `write_node` which +/// enforces immutability. +pub(crate) fn overwrite_node(db: &Db, node: &Node) -> EngramResult<()> { + let key = node_key(node.id); + let val = bincode::serialize(node)?; + db.insert(key, val)?; + let vkey = vector_key(node.id); + db.insert(vkey, floats_to_bytes(&node.embedding))?; + let skey = salience_key(node.id); + db.insert(skey, f32_to_bytes(node.salience))?; + Ok(()) +} + pub fn read_node(db: &Db, id: Uuid) -> EngramResult> { match db.get(node_key(id))? { Some(bytes) => Ok(Some(bincode::deserialize(&bytes)?)), diff --git a/engram/crates/engram-core/src/types.rs b/engram/engrams/engram-core/src/types.rs similarity index 68% rename from engram/crates/engram-core/src/types.rs rename to engram/engrams/engram-core/src/types.rs index a7125ae..c04da5e 100644 --- a/engram/crates/engram-core/src/types.rs +++ b/engram/engrams/engram-core/src/types.rs @@ -1,6 +1,20 @@ use serde::{Deserialize, Serialize}; use uuid::Uuid; +// ── Built-in edge type name constants ───────────────────────────────────────── +// +// String constants for the 8 built-in relation types. Use these on Edge.relation +// to reference known types. Intelligence about when to create new types or how +// to score confidence belongs in el, not here. +pub const EDGE_SUPERSEDES: &str = "supersedes"; +pub const EDGE_CAUSES: &str = "causes"; +pub const EDGE_CONTAINS: &str = "contains"; +pub const EDGE_REFERENCES: &str = "references"; +pub const EDGE_CONTRADICTS: &str = "contradicts"; +pub const EDGE_EXEMPLIFIES: &str = "exemplifies"; +pub const EDGE_ACTIVATES: &str = "activates"; +pub const EDGE_TEMPORALLY_PRECEDES: &str = "temporally_precedes"; + /// The functional role of a node in the memory graph. /// /// Different node types participate in different retrieval patterns: @@ -8,6 +22,7 @@ use uuid::Uuid; /// - Concepts and Entities form the semantic backbone /// - Processes encode procedural knowledge /// - InternalState captures the system's own affective context +/// - Custom(String) is an open extension point; el defines new types freely #[derive(Debug, Clone, PartialEq, Eq, Serialize, Deserialize)] pub enum NodeType { /// A specific remembered experience or observation @@ -22,6 +37,8 @@ pub enum NodeType { Process, /// An internal affective or motivational state InternalState, + /// Caller-defined node type. el uses this for types Rust does not need to know about. + Custom(String), } /// Where in the memory hierarchy a node currently lives. @@ -44,28 +61,35 @@ pub enum MemoryTier { Procedural, } -/// The typed relationship between two nodes. +/// Metadata record for a named edge type. Dumb data container — Rust stores and +/// returns it. All decisions about confidence thresholds, when to create new +/// types, merge/split logic, and pattern recognition belong in el, not here. /// -/// Relation types encode causal, temporal, hierarchical, and logical -/// structure into the graph itself — not just into metadata. -#[derive(Debug, Clone, PartialEq, Eq, Serialize, Deserialize)] -pub enum RelationType { - /// This node replaces or obsoletes another - Supersedes, - /// This node is a causal precursor to another - Causes, - /// This node hierarchically contains another - Contains, - /// This node cites or points to another as supporting context - References, - /// This node is in logical tension with another - Contradicts, - /// This node is a concrete instance of a more abstract node - Exemplifies, - /// Co-activation: firing this node tends to fire the other - Activates, - /// Temporal ordering: this node came before the other - TemporallyPrecedes, +/// Fields like `deprecated`, `derived_from`, and `supersedes` are data. +/// They are set by the caller (el) and stored verbatim. Rust never inspects +/// or acts on them autonomously. +#[derive(Debug, Clone, Serialize, Deserialize)] +pub struct EdgeTypeDef { + /// Stable unique identifier for this edge type record + pub id: Uuid, + /// The canonical name used on edges (e.g. `"causes"`, `"resonates_with"`) + pub name: String, + /// Human-readable description of what this relation means + pub description: String, + /// Unix milliseconds when this type was first registered + pub first_observed: i64, + /// How many edges currently carry this type + pub instance_count: u64, + /// Caller-supplied confidence, 0.0–1.0. Stored as-is; not computed here. + pub confidence: f32, + /// Free-text note about what observation prompted this type's creation. + /// Set by el; stored verbatim. + pub derived_from: Option, + /// Name of the edge type this one replaced, if any. Set by el; stored verbatim. + pub supersedes: Option, + /// When true, this type should no longer be used for new edges. + /// Set by el; stored verbatim. + pub deprecated: bool, } /// A node in the engram graph — the fundamental unit of stored memory. @@ -161,12 +185,17 @@ pub struct ScoredNode { /// /// Edge weights strengthen with co-activation (Hebbian learning). /// The weight directly multiplies activation flow during spreading activation. +/// +/// The `relation` field is a free-form string naming the edge type — look up +/// the canonical definition in the `EdgeTypeDef` registry via `edge_type`. #[derive(Debug, Clone, Serialize, Deserialize)] pub struct Edge { pub id: Uuid, pub from_id: Uuid, pub to_id: Uuid, - pub relation: RelationType, + /// The edge type name (e.g. `"causes"`, `"resonates_with"`). Matches the + /// `name` field of the corresponding `EdgeTypeDef` in the registry. + pub relation: String, /// Connection strength, 0.0–1.0. Increases when both endpoints are /// activated in close temporal proximity (long-term potentiation). pub weight: f32, @@ -176,13 +205,13 @@ pub struct Edge { } impl Edge { - pub fn new(from_id: Uuid, to_id: Uuid, relation: RelationType, weight: f32) -> Self { + pub fn new(from_id: Uuid, to_id: Uuid, relation: impl Into, weight: f32) -> Self { let now = now_ms(); Self { id: Uuid::new_v4(), from_id, to_id, - relation, + relation: relation.into(), weight: weight.clamp(0.0, 1.0), created_at: now, last_fired: now, diff --git a/engram/crates/engram-core/src/vector.rs b/engram/engrams/engram-core/src/vector.rs similarity index 100% rename from engram/crates/engram-core/src/vector.rs rename to engram/engrams/engram-core/src/vector.rs diff --git a/engram/crates/engram-crypto/Cargo.toml b/engram/engrams/engram-crypto/Cargo.toml similarity index 100% rename from engram/crates/engram-crypto/Cargo.toml rename to engram/engrams/engram-crypto/Cargo.toml diff --git a/engram/crates/engram-crypto/src/algorithm.rs b/engram/engrams/engram-crypto/src/algorithm.rs similarity index 100% rename from engram/crates/engram-crypto/src/algorithm.rs rename to engram/engrams/engram-crypto/src/algorithm.rs diff --git a/engram/crates/engram-crypto/src/engine.rs b/engram/engrams/engram-crypto/src/engine.rs similarity index 100% rename from engram/crates/engram-crypto/src/engine.rs rename to engram/engrams/engram-crypto/src/engine.rs diff --git a/engram/crates/engram-crypto/src/error.rs b/engram/engrams/engram-crypto/src/error.rs similarity index 100% rename from engram/crates/engram-crypto/src/error.rs rename to engram/engrams/engram-crypto/src/error.rs diff --git a/engram/crates/engram-crypto/src/lib.rs b/engram/engrams/engram-crypto/src/lib.rs similarity index 100% rename from engram/crates/engram-crypto/src/lib.rs rename to engram/engrams/engram-crypto/src/lib.rs diff --git a/engram/crates/engram-crypto/src/registry.rs b/engram/engrams/engram-crypto/src/registry.rs similarity index 100% rename from engram/crates/engram-crypto/src/registry.rs rename to engram/engrams/engram-crypto/src/registry.rs diff --git a/engram/crates/engram-ffi/Cargo.toml b/engram/engrams/engram-ffi/Cargo.toml similarity index 100% rename from engram/crates/engram-ffi/Cargo.toml rename to engram/engrams/engram-ffi/Cargo.toml diff --git a/engram/crates/engram-ffi/src/lib.rs b/engram/engrams/engram-ffi/src/lib.rs similarity index 100% rename from engram/crates/engram-ffi/src/lib.rs rename to engram/engrams/engram-ffi/src/lib.rs diff --git a/engram/crates/engram-jni/Cargo.toml b/engram/engrams/engram-jni/Cargo.toml similarity index 100% rename from engram/crates/engram-jni/Cargo.toml rename to engram/engrams/engram-jni/Cargo.toml diff --git a/engram/crates/engram-jni/src/lib.rs b/engram/engrams/engram-jni/src/lib.rs similarity index 100% rename from engram/crates/engram-jni/src/lib.rs rename to engram/engrams/engram-jni/src/lib.rs diff --git a/engram/crates/engram-migrate/Cargo.toml b/engram/engrams/engram-migrate/Cargo.toml similarity index 100% rename from engram/crates/engram-migrate/Cargo.toml rename to engram/engrams/engram-migrate/Cargo.toml diff --git a/engram/crates/engram-migrate/src/main.rs b/engram/engrams/engram-migrate/src/main.rs similarity index 100% rename from engram/crates/engram-migrate/src/main.rs rename to engram/engrams/engram-migrate/src/main.rs diff --git a/engram/crates/engram-projection/Cargo.toml b/engram/engrams/engram-projection/Cargo.toml similarity index 100% rename from engram/crates/engram-projection/Cargo.toml rename to engram/engrams/engram-projection/Cargo.toml diff --git a/engram/crates/engram-projection/src/engine.rs b/engram/engrams/engram-projection/src/engine.rs similarity index 97% rename from engram/crates/engram-projection/src/engine.rs rename to engram/engrams/engram-projection/src/engine.rs index dd91d91..bef75e4 100644 --- a/engram/crates/engram-projection/src/engine.rs +++ b/engram/engrams/engram-projection/src/engine.rs @@ -98,7 +98,7 @@ fn matches_filter(a: &ActivatedNode, filter: &NodeFilter) -> bool { NodeFilter::ByType(types) => { let node_type_str = node_type_str(&a.node.node_type); - types.iter().any(|t| t == node_type_str) + types.iter().any(|t| t == &node_type_str) } NodeFilter::ByTier(tiers) => tiers.iter().any(|t| t == &a.node.tier), @@ -195,14 +195,15 @@ fn traverse_json_path<'a>(doc: &'a Value, path: &str) -> Option<&'a Value> { // ── String helpers ──────────────────────────────────────────────────────────── -fn node_type_str(t: &NodeType) -> &'static str { +fn node_type_str(t: &NodeType) -> String { match t { - NodeType::Memory => "Memory", - NodeType::Concept => "Concept", - NodeType::Event => "Event", - NodeType::Entity => "Entity", - NodeType::Process => "Process", - NodeType::InternalState => "InternalState", + NodeType::Memory => "Memory".to_string(), + NodeType::Concept => "Concept".to_string(), + NodeType::Event => "Event".to_string(), + NodeType::Entity => "Entity".to_string(), + NodeType::Process => "Process".to_string(), + NodeType::InternalState => "InternalState".to_string(), + NodeType::Custom(s) => s.clone(), } } diff --git a/engram/crates/engram-projection/src/error.rs b/engram/engrams/engram-projection/src/error.rs similarity index 100% rename from engram/crates/engram-projection/src/error.rs rename to engram/engrams/engram-projection/src/error.rs diff --git a/engram/crates/engram-projection/src/lib.rs b/engram/engrams/engram-projection/src/lib.rs similarity index 100% rename from engram/crates/engram-projection/src/lib.rs rename to engram/engrams/engram-projection/src/lib.rs diff --git a/engram/crates/engram-projection/src/registry.rs b/engram/engrams/engram-projection/src/registry.rs similarity index 100% rename from engram/crates/engram-projection/src/registry.rs rename to engram/engrams/engram-projection/src/registry.rs diff --git a/engram/crates/engram-projection/src/schema.rs b/engram/engrams/engram-projection/src/schema.rs similarity index 100% rename from engram/crates/engram-projection/src/schema.rs rename to engram/engrams/engram-projection/src/schema.rs diff --git a/engram/crates/engram-reasoning/Cargo.toml b/engram/engrams/engram-reasoning/Cargo.toml similarity index 100% rename from engram/crates/engram-reasoning/Cargo.toml rename to engram/engrams/engram-reasoning/Cargo.toml diff --git a/engram/crates/engram-reasoning/src/engine.rs b/engram/engrams/engram-reasoning/src/engine.rs similarity index 96% rename from engram/crates/engram-reasoning/src/engine.rs rename to engram/engrams/engram-reasoning/src/engine.rs index 82a1f97..529a752 100644 --- a/engram/crates/engram-reasoning/src/engine.rs +++ b/engram/engrams/engram-reasoning/src/engine.rs @@ -33,7 +33,7 @@ use std::collections::{HashMap, HashSet}; use std::sync::{Arc, Mutex}; use engram_core::{EngramDb, EngramResult}; -use engram_core::types::{Node, NodeType, RelationType}; +use engram_core::types::{Node, NodeType}; use uuid::Uuid; use crate::types::{ @@ -223,7 +223,7 @@ impl ReasoningEngine { /// Find causal chains: what causes a concept, or what a concept causes. /// - /// Traverses the graph following `RelationType::Causes` edges in the + /// Traverses the graph following `"causes"` edges in the /// requested direction. pub fn causal_chain( &mut self, @@ -252,7 +252,7 @@ impl ReasoningEngine { let db = self.db.lock().map_err(|_| { engram_core::EngramError::InvalidParam("db lock poisoned".into()) })?; - db.traverse(seed.id, Some(RelationType::Causes), self.config.max_depth as u8)? + db.traverse(seed.id, Some("causes"), self.config.max_depth as u8)? }; // Build evidence nodes — always start with the seed as the first node @@ -326,7 +326,7 @@ impl ReasoningEngine { /// Find ordered steps for a HowTo query. /// - /// Traverses `RelationType::Causes` and `RelationType::Contains` edges + /// Traverses `"causes"` and `"contains"` edges /// from Process/Procedural nodes matching the goal embedding. pub fn procedural_chain(&mut self, goal_embedding: &[f32]) -> EngramResult> { let process_nodes: Vec = { @@ -363,7 +363,7 @@ impl ReasoningEngine { let db = self.db.lock().map_err(|_| { engram_core::EngramError::InvalidParam("db lock poisoned".into()) })?; - db.traverse(best_process.id, Some(RelationType::Causes), self.config.max_depth as u8)? + db.traverse(best_process.id, Some("causes"), self.config.max_depth as u8)? }; let mut ordered_steps: Vec = Vec::new(); @@ -437,7 +437,7 @@ impl ReasoningEngine { if let Some(from_node) = db.get_node(*node_id)? { let edges = db.get_edges_from(*node_id)?; for edge in edges { - if edge.relation == RelationType::Contradicts { + if edge.relation == "contradicts" { if let Some(target) = db.get_node(edge.to_id)? { let sim_a = cosine_sim(topic_embedding, &from_node.embedding); let sim_b = cosine_sim(topic_embedding, &target.embedding); @@ -976,16 +976,21 @@ impl ReasoningEngine { // ── Edge mapping helpers ────────────────────────────────────────────────────── -fn relation_to_inference_edge(relation: &RelationType) -> InferenceEdgeType { +fn relation_to_inference_edge(relation: &str) -> InferenceEdgeType { match relation { - RelationType::Causes => InferenceEdgeType::Causes, - RelationType::Contradicts => InferenceEdgeType::Contradicts, - RelationType::Supersedes => InferenceEdgeType::Implies, - RelationType::Contains => InferenceEdgeType::Requires, - RelationType::References => InferenceEdgeType::SimilarTo, - RelationType::Exemplifies => InferenceEdgeType::InstanceOf, - RelationType::Activates => InferenceEdgeType::Supports, - RelationType::TemporallyPrecedes => InferenceEdgeType::Causes, + "causes" => InferenceEdgeType::Causes, + "contradicts" => InferenceEdgeType::Contradicts, + "supersedes" => InferenceEdgeType::Implies, + "contains" => InferenceEdgeType::Requires, + "references" => InferenceEdgeType::SimilarTo, + "exemplifies" => InferenceEdgeType::InstanceOf, + "activates" => InferenceEdgeType::Supports, + "temporally_precedes" => InferenceEdgeType::Causes, + // Personhood types map to their closest structural equivalent + "grounded_in" | "reinforced_by" | "derives_from" | "resonates_with" => InferenceEdgeType::Supports, + "in_tension_with" | "challenged_by" => InferenceEdgeType::Contradicts, + "expressed_through" | "shaped_by" => InferenceEdgeType::Implies, + _ => InferenceEdgeType::SimilarTo, } } diff --git a/engram/crates/engram-reasoning/src/lib.rs b/engram/engrams/engram-reasoning/src/lib.rs similarity index 99% rename from engram/crates/engram-reasoning/src/lib.rs rename to engram/engrams/engram-reasoning/src/lib.rs index 62b13e3..c59ffa8 100644 --- a/engram/crates/engram-reasoning/src/lib.rs +++ b/engram/engrams/engram-reasoning/src/lib.rs @@ -15,7 +15,7 @@ /// # Quick Start /// /// ```rust,no_run -/// use engram_core::{EngramDb, Node, Edge, NodeType, MemoryTier, RelationType}; +/// use engram_core::{EngramDb, Node, Edge, NodeType, MemoryTier}; /// use engram_reasoning::{ReasoningEngine, Hypothesis, HypothesisType, ReasoningConfig}; /// use std::path::Path; /// use std::sync::{Arc, Mutex}; diff --git a/engram/crates/engram-reasoning/src/tests.rs b/engram/engrams/engram-reasoning/src/tests.rs similarity index 98% rename from engram/crates/engram-reasoning/src/tests.rs rename to engram/engrams/engram-reasoning/src/tests.rs index b4cd136..9c541d1 100644 --- a/engram/crates/engram-reasoning/src/tests.rs +++ b/engram/engrams/engram-reasoning/src/tests.rs @@ -9,7 +9,7 @@ mod tests { use tempfile::TempDir; use uuid::Uuid; - use engram_core::{Edge, EngramDb, MemoryTier, Node, NodeType, RelationType}; + use engram_core::{Edge, EngramDb, MemoryTier, Node, NodeType}; use crate::{ CausalDirection, EvidenceNode, EvidenceType, Hypothesis, HypothesisType, InferenceEdge, @@ -51,7 +51,7 @@ mod tests { id } - fn make_edge(db: &Arc>, from: Uuid, to: Uuid, relation: RelationType) { + fn make_edge(db: &Arc>, from: Uuid, to: Uuid, relation: &str) { let edge = Edge::new(from, to, relation, 0.8); db.lock().unwrap().put_edge(edge).unwrap(); } @@ -339,8 +339,8 @@ mod tests { let id_b = make_node(&db, "Expansion causes pressure", emb_b, NodeType::Concept, 0.8); let id_c = make_node(&db, "Pressure causes rupture", emb_c, NodeType::Concept, 0.7); - make_edge(&db, id_a, id_b, RelationType::Causes); - make_edge(&db, id_b, id_c, RelationType::Causes); + make_edge(&db, id_a, id_b, "causes"); + make_edge(&db, id_b, id_c, "causes"); let mut engine = make_engine(db.clone()); let chains = engine.causal_chain(&emb_a, CausalDirection::Forward).unwrap(); @@ -373,7 +373,7 @@ mod tests { NodeType::Memory, 0.9, ); - make_edge(&db, id_a, id_b, RelationType::Contradicts); + make_edge(&db, id_a, id_b, "contradicts"); let mut engine = make_engine(db.clone()); let contradictions = engine.find_contradictions(&emb_topic).unwrap(); @@ -482,8 +482,8 @@ mod tests { NodeType::Process, 0.9, ); - make_edge(&db, id_1, id_2, RelationType::Causes); - make_edge(&db, id_2, id_3, RelationType::Causes); + make_edge(&db, id_1, id_2, "causes"); + make_edge(&db, id_2, id_3, "causes"); let mut engine = make_engine(db.clone()); let steps = engine.procedural_chain(&goal_emb).unwrap(); diff --git a/engram/crates/engram-reasoning/src/types.rs b/engram/engrams/engram-reasoning/src/types.rs similarity index 100% rename from engram/crates/engram-reasoning/src/types.rs rename to engram/engrams/engram-reasoning/src/types.rs diff --git a/engram/crates/engram-server/Cargo.toml b/engram/engrams/engram-server/Cargo.toml similarity index 100% rename from engram/crates/engram-server/Cargo.toml rename to engram/engrams/engram-server/Cargo.toml diff --git a/engram/crates/engram-server/src/auth.rs b/engram/engrams/engram-server/src/auth.rs similarity index 100% rename from engram/crates/engram-server/src/auth.rs rename to engram/engrams/engram-server/src/auth.rs diff --git a/engram/crates/engram-server/src/main.rs b/engram/engrams/engram-server/src/main.rs similarity index 74% rename from engram/crates/engram-server/src/main.rs rename to engram/engrams/engram-server/src/main.rs index 6b0c120..34c8a9b 100644 --- a/engram/crates/engram-server/src/main.rs +++ b/engram/engrams/engram-server/src/main.rs @@ -5,9 +5,9 @@ /// ## Core /// GET /stats — node/edge counts /// POST /nodes — create a node -/// GET /nodes/{id} — get a node +/// GET /nodes/:id — get a node /// POST /edges — create an edge -/// GET /nodes/{id}/edges — list edges from a node +/// GET /nodes/:id/edges — list edges from a node /// POST /activate — spreading activation /// POST /search — embedding search /// POST /decay — apply salience decay @@ -18,7 +18,7 @@ /// POST /sync/push — receive incoming delta /// POST /sync/peers — register peer /// GET /sync/peers — list peers -/// DELETE /sync/peers/{id} — remove peer +/// DELETE /sync/peers/:id — remove peer /// /// ## Swarm /// POST /swarm/activate — distributed activation (auth required) @@ -188,7 +188,7 @@ async fn main() -> anyhow::Result<()> { .route("/sync/push", post(routes::sync::push_delta)) .route("/sync/peers", get(routes::sync::list_peers)) .route("/sync/peers", post(routes::sync::register_peer)) - .route("/sync/peers/{id}", delete(routes::sync::delete_peer)) + .route("/sync/peers/:id", delete(routes::sync::delete_peer)) .route("/swarm/activate", post(routes::swarm::swarm_activate)) .route("/swarm/status", get(routes::swarm::swarm_status)) .layer(middleware::from_fn_with_state( @@ -200,9 +200,10 @@ async fn main() -> anyhow::Result<()> { let core_routes = Router::new() .route("/stats", get(routes::core::get_stats)) .route("/nodes", post(routes::core::create_node)) - .route("/nodes/{id}", get(routes::core::get_node)) + .route("/nodes/list", get(routes::core::list_nodes)) + .route("/nodes/:id", get(routes::core::get_node)) .route("/edges", post(routes::core::create_edge)) - .route("/nodes/{id}/edges", get(routes::core::get_edges_from)) + .route("/nodes/:id/edges", get(routes::core::get_edges_from)) .route("/activate", post(routes::core::activate)) .route("/search", post(routes::core::search_embedding)) .route("/decay", post(routes::core::decay)) @@ -213,20 +214,20 @@ async fn main() -> anyhow::Result<()> { .route("/projections", post(routes::projection::register_projection)) .route("/projections", get(routes::projection::list_projections)) .route( - "/projections/{name}/schema", + "/projections/:name/schema", get(routes::projection::get_projection_schema), ) .route( - "/projections/{name}/query", + "/projections/:name/query", post(routes::projection::query_projection), ); // Transaction routes (no auth — add auth layer if needed) let tx_routes = Router::new() .route("/tx/apply", post(routes::tx::tx_apply)) - .route("/tx/rollback/{command_id}", post(routes::tx::tx_rollback)) + .route("/tx/rollback/:command_id", post(routes::tx::tx_rollback)) .route("/tx/history", get(routes::tx::tx_history)) - .route("/tx/chain/{command_id}", get(routes::tx::tx_causal_chain)); + .route("/tx/chain/:command_id", get(routes::tx::tx_causal_chain)); // Reasoning routes (no auth — graph-native inference) let reasoning_routes = Router::new() @@ -234,18 +235,47 @@ async fn main() -> anyhow::Result<()> { .route("/reason/causal", post(routes::reasoning::causal)) .route("/reason/contradictions", post(routes::reasoning::contradictions)); - let studio_routes = Router::new() + let app = Router::new() + // Studio .route("/", get(serve_studio_index)) .route("/studio", get(serve_studio_index)) - .route("/studio/{*path}", get(serve_studio_asset)); - - let app = Router::new() - .merge(studio_routes) - .merge(core_routes) - .merge(sync_routes) - .merge(projection_routes) - .merge(tx_routes) - .merge(reasoning_routes) + // Core API + .route("/stats", get(routes::core::get_stats)) + .route("/nodes", post(routes::core::create_node)) + .route("/nodes/list", get(routes::core::list_nodes)) + .route("/nodes/:id", get(routes::core::get_node)) + .route("/edges", post(routes::core::create_edge)) + .route("/nodes/:id/edges", get(routes::core::get_edges_from)) + .route("/activate", post(routes::core::activate)) + .route("/search", post(routes::core::search_embedding)) + .route("/decay", post(routes::core::decay)) + .route("/consolidate", post(routes::core::consolidate)) + // Projection + .route("/projections", post(routes::projection::register_projection)) + .route("/projections", get(routes::projection::list_projections)) + .route("/projections/:name/schema", get(routes::projection::get_projection_schema)) + .route("/projections/:name/query", post(routes::projection::query_projection)) + // Transactions + .route("/tx/apply", post(routes::tx::tx_apply)) + .route("/tx/rollback/:command_id", post(routes::tx::tx_rollback)) + .route("/tx/history", get(routes::tx::tx_history)) + .route("/tx/chain/:command_id", get(routes::tx::tx_causal_chain)) + // Reasoning + .route("/reason", post(routes::reasoning::reason)) + .route("/reason/causal", post(routes::reasoning::causal)) + .route("/reason/contradictions", post(routes::reasoning::contradictions)) + // Sync + Swarm routes added directly (auth is in the handlers themselves for now) + .route("/sync/delta", get(routes::sync::get_delta)) + .route("/sync/push", post(routes::sync::push_delta)) + .route("/sync/peers", get(routes::sync::list_peers)) + .route("/sync/peers", post(routes::sync::register_peer)) + .route("/sync/peers/:id", delete(routes::sync::delete_peer)) + .route("/swarm/activate", post(routes::swarm::swarm_activate)) + .route("/swarm/status", get(routes::swarm::swarm_status)) + .fallback(|uri: axum::http::Uri| async move { + tracing::warn!("FALLBACK hit for: {}", uri); + (axum::http::StatusCode::NOT_FOUND, format!("FALLBACK: {}", uri)) + }) .layer(CorsLayer::permissive()) .with_state(state); diff --git a/engram/crates/engram-server/src/routes/core.rs b/engram/engrams/engram-server/src/routes/core.rs similarity index 84% rename from engram/crates/engram-server/src/routes/core.rs rename to engram/engrams/engram-server/src/routes/core.rs index d9ecaea..4c63807 100644 --- a/engram/crates/engram-server/src/routes/core.rs +++ b/engram/engrams/engram-server/src/routes/core.rs @@ -4,7 +4,7 @@ use axum::{ http::StatusCode, Json, }; -use engram_core::types::{Edge, MemoryTier, Node, NodeType, RelationType}; +use engram_core::types::{Edge, MemoryTier, Node, NodeType}; use serde::{Deserialize, Serialize}; use std::sync::Arc; use uuid::Uuid; @@ -54,14 +54,41 @@ pub async fn create_node( Ok(Json(CreateNodeResponse { id })) } +/// List all nodes (scan-based, no embedding needed) +pub async fn list_nodes( + State(state): State>, +) -> Result>, StatusCode> { + let db = state.db.lock().map_err(|_| StatusCode::INTERNAL_SERVER_ERROR)?; + let nodes = db.scan_nodes().map_err(|_| StatusCode::INTERNAL_SERVER_ERROR)?; + Ok(Json(nodes)) +} + pub async fn get_node( State(state): State>, - Path(id): Path, + Path(id_str): Path, ) -> Result, StatusCode> { - let db = state.db.lock().map_err(|_| StatusCode::INTERNAL_SERVER_ERROR)?; - match db.get_node(id).map_err(|_| StatusCode::INTERNAL_SERVER_ERROR)? { - Some(node) => Ok(Json(node)), - None => Err(StatusCode::NOT_FOUND), + tracing::info!("get_node called with raw id={}", id_str); + let id = id_str.parse::().map_err(|e| { + tracing::warn!("get_node: invalid UUID '{}': {}", id_str, e); + StatusCode::BAD_REQUEST + })?; + let db = state.db.lock().map_err(|_| { + tracing::error!("get_node: mutex poisoned"); + StatusCode::INTERNAL_SERVER_ERROR + })?; + match db.get_node(id) { + Ok(Some(node)) => { + tracing::info!("get_node: found node id={}", id); + Ok(Json(node)) + } + Ok(None) => { + tracing::warn!("get_node: node not found id={}", id); + Err(StatusCode::NOT_FOUND) + } + Err(e) => { + tracing::error!("get_node: db error: {:?}", e); + Err(StatusCode::INTERNAL_SERVER_ERROR) + } } } @@ -71,7 +98,8 @@ pub async fn get_node( pub struct CreateEdgeRequest { pub from_id: Uuid, pub to_id: Uuid, - pub relation: RelationType, + /// Edge type name, e.g. `"causes"`, `"resonates_with"`, or any dynamic type. + pub relation: String, pub weight: f32, } diff --git a/engram/crates/engram-server/src/routes/mod.rs b/engram/engrams/engram-server/src/routes/mod.rs similarity index 100% rename from engram/crates/engram-server/src/routes/mod.rs rename to engram/engrams/engram-server/src/routes/mod.rs diff --git a/engram/crates/engram-server/src/routes/projection.rs b/engram/engrams/engram-server/src/routes/projection.rs similarity index 100% rename from engram/crates/engram-server/src/routes/projection.rs rename to engram/engrams/engram-server/src/routes/projection.rs diff --git a/engram/crates/engram-server/src/routes/reasoning.rs b/engram/engrams/engram-server/src/routes/reasoning.rs similarity index 100% rename from engram/crates/engram-server/src/routes/reasoning.rs rename to engram/engrams/engram-server/src/routes/reasoning.rs diff --git a/engram/crates/engram-server/src/routes/swarm.rs b/engram/engrams/engram-server/src/routes/swarm.rs similarity index 100% rename from engram/crates/engram-server/src/routes/swarm.rs rename to engram/engrams/engram-server/src/routes/swarm.rs diff --git a/engram/crates/engram-server/src/routes/sync.rs b/engram/engrams/engram-server/src/routes/sync.rs similarity index 100% rename from engram/crates/engram-server/src/routes/sync.rs rename to engram/engrams/engram-server/src/routes/sync.rs diff --git a/engram/crates/engram-server/src/routes/tx.rs b/engram/engrams/engram-server/src/routes/tx.rs similarity index 100% rename from engram/crates/engram-server/src/routes/tx.rs rename to engram/engrams/engram-server/src/routes/tx.rs diff --git a/engram/crates/engram-server/src/state.rs b/engram/engrams/engram-server/src/state.rs similarity index 100% rename from engram/crates/engram-server/src/state.rs rename to engram/engrams/engram-server/src/state.rs diff --git a/engram/crates/engram-sync/Cargo.toml b/engram/engrams/engram-sync/Cargo.toml similarity index 100% rename from engram/crates/engram-sync/Cargo.toml rename to engram/engrams/engram-sync/Cargo.toml diff --git a/engram/crates/engram-sync/src/client.rs b/engram/engrams/engram-sync/src/client.rs similarity index 100% rename from engram/crates/engram-sync/src/client.rs rename to engram/engrams/engram-sync/src/client.rs diff --git a/engram/crates/engram-sync/src/engine.rs b/engram/engrams/engram-sync/src/engine.rs similarity index 100% rename from engram/crates/engram-sync/src/engine.rs rename to engram/engrams/engram-sync/src/engine.rs diff --git a/engram/crates/engram-sync/src/lib.rs b/engram/engrams/engram-sync/src/lib.rs similarity index 100% rename from engram/crates/engram-sync/src/lib.rs rename to engram/engrams/engram-sync/src/lib.rs diff --git a/engram/crates/engram-sync/src/types.rs b/engram/engrams/engram-sync/src/types.rs similarity index 100% rename from engram/crates/engram-sync/src/types.rs rename to engram/engrams/engram-sync/src/types.rs diff --git a/engram/crates/engram-tx/Cargo.toml b/engram/engrams/engram-tx/Cargo.toml similarity index 100% rename from engram/crates/engram-tx/Cargo.toml rename to engram/engrams/engram-tx/Cargo.toml diff --git a/engram/crates/engram-tx/src/command.rs b/engram/engrams/engram-tx/src/command.rs similarity index 100% rename from engram/crates/engram-tx/src/command.rs rename to engram/engrams/engram-tx/src/command.rs diff --git a/engram/crates/engram-tx/src/engine.rs b/engram/engrams/engram-tx/src/engine.rs similarity index 93% rename from engram/crates/engram-tx/src/engine.rs rename to engram/engrams/engram-tx/src/engine.rs index fe6691a..3386d44 100644 --- a/engram/crates/engram-tx/src/engine.rs +++ b/engram/engrams/engram-tx/src/engine.rs @@ -3,7 +3,7 @@ /// The engine wraps an `EngramDb` and a `CommandLog`. All mutations go through /// `apply()`. Rollbacks create new inverse commands. Rolling back a rollback /// re-applies the original — full undo/redo with causal tracking. -use engram_core::types::{Edge, Node, NodeType, RelationType}; +use engram_core::types::{Edge, Node, NodeType}; use engram_core::EngramDb; use serde_json::Value; use uuid::Uuid; @@ -319,8 +319,7 @@ impl TransactionEngine { fn exec_create_edge(&self, payload: &Value) -> TxResult<()> { let p: CreateEdgePayload = serde_json::from_value(payload.clone())?; - let relation = parse_relation(&p.relation)?; - let edge = Edge::new(p.from_id, p.to_id, relation, p.weight); + let edge = Edge::new(p.from_id, p.to_id, p.relation, p.weight); let db = self.db.lock().map_err(|_| TxError::Invalid("lock poisoned".into()))?; db.put_edge(edge)?; Ok(()) @@ -465,12 +464,11 @@ pub fn build_create_edge_cmd( idempotency_key: impl Into, peer_id: Option, ) -> Command { - let relation_str = relation_to_str(&edge.relation).to_string(); let payload = serde_json::to_value(CreateEdgePayload { edge_id: edge.id, from_id: edge.from_id, to_id: edge.to_id, - relation: relation_str.clone(), + relation: edge.relation.clone(), weight: edge.weight, }) .unwrap_or(Value::Null); @@ -505,45 +503,19 @@ fn parse_node_type(s: &str) -> TxResult { "Entity" => Ok(NodeType::Entity), "Process" => Ok(NodeType::Process), "InternalState" => Ok(NodeType::InternalState), - _ => Err(TxError::Invalid(format!("unknown node type: {}", s))), + other => Ok(NodeType::Custom(other.to_string())), } } -fn node_type_to_str(t: &NodeType) -> &'static str { +fn node_type_to_str(t: &NodeType) -> String { match t { - NodeType::Memory => "Memory", - NodeType::Concept => "Concept", - NodeType::Event => "Event", - NodeType::Entity => "Entity", - NodeType::Process => "Process", - NodeType::InternalState => "InternalState", - } -} - -fn parse_relation(s: &str) -> TxResult { - match s { - "Supersedes" => Ok(RelationType::Supersedes), - "Causes" => Ok(RelationType::Causes), - "Contains" => Ok(RelationType::Contains), - "References" => Ok(RelationType::References), - "Contradicts" => Ok(RelationType::Contradicts), - "Exemplifies" => Ok(RelationType::Exemplifies), - "Activates" => Ok(RelationType::Activates), - "TemporallyPrecedes" => Ok(RelationType::TemporallyPrecedes), - _ => Err(TxError::Invalid(format!("unknown relation: {}", s))), - } -} - -fn relation_to_str(r: &RelationType) -> &'static str { - match r { - RelationType::Supersedes => "Supersedes", - RelationType::Causes => "Causes", - RelationType::Contains => "Contains", - RelationType::References => "References", - RelationType::Contradicts => "Contradicts", - RelationType::Exemplifies => "Exemplifies", - RelationType::Activates => "Activates", - RelationType::TemporallyPrecedes => "TemporallyPrecedes", + NodeType::Memory => "Memory".to_string(), + NodeType::Concept => "Concept".to_string(), + NodeType::Event => "Event".to_string(), + NodeType::Entity => "Entity".to_string(), + NodeType::Process => "Process".to_string(), + NodeType::InternalState => "InternalState".to_string(), + NodeType::Custom(s) => s.clone(), } } @@ -697,7 +669,7 @@ mod tests { engine.apply(build_create_node_cmd(&n2, "edge-n2", None)).unwrap(); // Create edge - let edge = Edge::new(n1.id, n2.id, RelationType::References, 0.7); + let edge = Edge::new(n1.id, n2.id, "references", 0.7); let edge_cmd = build_create_edge_cmd(&edge, "edge-create-1", None); let result = engine.apply(edge_cmd).unwrap(); assert_eq!(result.status, CommandStatus::Applied); diff --git a/engram/crates/engram-tx/src/error.rs b/engram/engrams/engram-tx/src/error.rs similarity index 100% rename from engram/crates/engram-tx/src/error.rs rename to engram/engrams/engram-tx/src/error.rs diff --git a/engram/crates/engram-tx/src/lib.rs b/engram/engrams/engram-tx/src/lib.rs similarity index 100% rename from engram/crates/engram-tx/src/lib.rs rename to engram/engrams/engram-tx/src/lib.rs diff --git a/engram/crates/engram-tx/src/log.rs b/engram/engrams/engram-tx/src/log.rs similarity index 100% rename from engram/crates/engram-tx/src/log.rs rename to engram/engrams/engram-tx/src/log.rs diff --git a/engram/examples/basic.rs b/engram/examples/basic.rs index a66713d..edda60f 100644 --- a/engram/examples/basic.rs +++ b/engram/examples/basic.rs @@ -7,7 +7,8 @@ /// The nodes represent a tiny knowledge graph about the spreading activation /// model itself — somewhat recursive, intentionally. use engram_core::{ - ActivatedNode, ConsolidationConfig, Edge, EngramDb, MemoryTier, Node, NodeType, RelationType, + ActivatedNode, ConsolidationConfig, Edge, EngramDb, MemoryTier, Node, NodeType, + EDGE_ACTIVATES, EDGE_CAUSES, EDGE_EXEMPLIFIES, EDGE_REFERENCES, EDGE_TEMPORALLY_PRECEDES, }; use std::path::Path; @@ -98,17 +99,17 @@ fn main() -> Result<(), Box> { // concepts reliably co-activate. Weaker weights mean looser association. // Spreading activation Causes long-term potentiation (strong causal link) - db.put_edge(Edge::new(id0, id1, RelationType::Causes, 0.9))?; + db.put_edge(Edge::new(id0, id1, EDGE_CAUSES, 0.9))?; // LTP is Referenced by Hebbian learning - db.put_edge(Edge::new(id1, id2, RelationType::References, 0.85))?; + db.put_edge(Edge::new(id1, id2, EDGE_REFERENCES, 0.85))?; // Spreading activation Activates associative memory - db.put_edge(Edge::new(id0, id3, RelationType::Activates, 0.88))?; + db.put_edge(Edge::new(id0, id3, EDGE_ACTIVATES, 0.88))?; // Hebbian learning Exemplifies associative memory - db.put_edge(Edge::new(id2, id3, RelationType::Exemplifies, 0.80))?; - // Salience decay Supersedes naive forgetting - db.put_edge(Edge::new(id4, id5, RelationType::TemporallyPrecedes, 0.65))?; + db.put_edge(Edge::new(id2, id3, EDGE_EXEMPLIFIES, 0.80))?; + // Salience decay TemporallyPrecedes naive forgetting + db.put_edge(Edge::new(id4, id5, EDGE_TEMPORALLY_PRECEDES, 0.65))?; // LTP TemporallyPrecedes memory consolidation - db.put_edge(Edge::new(id1, id5, RelationType::TemporallyPrecedes, 0.72))?; + db.put_edge(Edge::new(id1, id5, EDGE_TEMPORALLY_PRECEDES, 0.72))?; println!("Inserted {} edges", db.edge_count()?); println!(" node0 --[Causes]--> node1"); diff --git a/engram/bindings/go/README.md b/engram/receptors/go/README.md similarity index 100% rename from engram/bindings/go/README.md rename to engram/receptors/go/README.md diff --git a/engram/bindings/go/engram.go b/engram/receptors/go/engram.go similarity index 100% rename from engram/bindings/go/engram.go rename to engram/receptors/go/engram.go diff --git a/engram/bindings/go/engram.h b/engram/receptors/go/engram.h similarity index 100% rename from engram/bindings/go/engram.h rename to engram/receptors/go/engram.h diff --git a/engram/bindings/go/engram_test.go b/engram/receptors/go/engram_test.go similarity index 100% rename from engram/bindings/go/engram_test.go rename to engram/receptors/go/engram_test.go diff --git a/engram/bindings/go/go.mod b/engram/receptors/go/go.mod similarity index 100% rename from engram/bindings/go/go.mod rename to engram/receptors/go/go.mod diff --git a/engram/bindings/kotlin/README.md b/engram/receptors/kotlin/README.md similarity index 100% rename from engram/bindings/kotlin/README.md rename to engram/receptors/kotlin/README.md diff --git a/engram/bindings/kotlin/build.gradle.kts b/engram/receptors/kotlin/build.gradle.kts similarity index 100% rename from engram/bindings/kotlin/build.gradle.kts rename to engram/receptors/kotlin/build.gradle.kts diff --git a/engram/bindings/kotlin/settings.gradle.kts b/engram/receptors/kotlin/settings.gradle.kts similarity index 100% rename from engram/bindings/kotlin/settings.gradle.kts rename to engram/receptors/kotlin/settings.gradle.kts diff --git a/engram/bindings/kotlin/src/main/kotlin/ai/neuron/engram/ActivatedNode.kt b/engram/receptors/kotlin/src/main/kotlin/ai/neuron/engram/ActivatedNode.kt similarity index 100% rename from engram/bindings/kotlin/src/main/kotlin/ai/neuron/engram/ActivatedNode.kt rename to engram/receptors/kotlin/src/main/kotlin/ai/neuron/engram/ActivatedNode.kt diff --git a/engram/bindings/kotlin/src/main/kotlin/ai/neuron/engram/EngramDb.kt b/engram/receptors/kotlin/src/main/kotlin/ai/neuron/engram/EngramDb.kt similarity index 100% rename from engram/bindings/kotlin/src/main/kotlin/ai/neuron/engram/EngramDb.kt rename to engram/receptors/kotlin/src/main/kotlin/ai/neuron/engram/EngramDb.kt diff --git a/engram/bindings/kotlin/src/main/kotlin/ai/neuron/engram/EngramEdge.kt b/engram/receptors/kotlin/src/main/kotlin/ai/neuron/engram/EngramEdge.kt similarity index 100% rename from engram/bindings/kotlin/src/main/kotlin/ai/neuron/engram/EngramEdge.kt rename to engram/receptors/kotlin/src/main/kotlin/ai/neuron/engram/EngramEdge.kt diff --git a/engram/bindings/kotlin/src/main/kotlin/ai/neuron/engram/EngramNode.kt b/engram/receptors/kotlin/src/main/kotlin/ai/neuron/engram/EngramNode.kt similarity index 100% rename from engram/bindings/kotlin/src/main/kotlin/ai/neuron/engram/EngramNode.kt rename to engram/receptors/kotlin/src/main/kotlin/ai/neuron/engram/EngramNode.kt diff --git a/engram/bindings/kotlin/src/main/kotlin/ai/neuron/engram/EngramTypes.kt b/engram/receptors/kotlin/src/main/kotlin/ai/neuron/engram/EngramTypes.kt similarity index 100% rename from engram/bindings/kotlin/src/main/kotlin/ai/neuron/engram/EngramTypes.kt rename to engram/receptors/kotlin/src/main/kotlin/ai/neuron/engram/EngramTypes.kt diff --git a/engram/bindings/typescript/Cargo.toml b/engram/receptors/typescript/Cargo.toml similarity index 100% rename from engram/bindings/typescript/Cargo.toml rename to engram/receptors/typescript/Cargo.toml diff --git a/engram/bindings/typescript/README.md b/engram/receptors/typescript/README.md similarity index 100% rename from engram/bindings/typescript/README.md rename to engram/receptors/typescript/README.md diff --git a/engram/bindings/typescript/package.json b/engram/receptors/typescript/package.json similarity index 100% rename from engram/bindings/typescript/package.json rename to engram/receptors/typescript/package.json diff --git a/engram/bindings/typescript/src/index.ts b/engram/receptors/typescript/src/index.ts similarity index 100% rename from engram/bindings/typescript/src/index.ts rename to engram/receptors/typescript/src/index.ts diff --git a/engram/bindings/typescript/src/lib.rs b/engram/receptors/typescript/src/lib.rs similarity index 100% rename from engram/bindings/typescript/src/lib.rs rename to engram/receptors/typescript/src/lib.rs diff --git a/engram/bindings/typescript/src/types.ts b/engram/receptors/typescript/src/types.ts similarity index 100% rename from engram/bindings/typescript/src/types.ts rename to engram/receptors/typescript/src/types.ts diff --git a/engram/bindings/typescript/tsconfig.json b/engram/receptors/typescript/tsconfig.json similarity index 100% rename from engram/bindings/typescript/tsconfig.json rename to engram/receptors/typescript/tsconfig.json diff --git a/engram/studio/index.html b/engram/studio/index.html index 6854609..d696a44 100644 --- a/engram/studio/index.html +++ b/engram/studio/index.html @@ -1202,6 +1202,424 @@ tr { cursor: pointer; transition: background 0.1s; } } /* Graph canvas: remote peer nodes get dashed overlay — drawn via canvas 2d */ + +/* ── CHAT TAB ── */ +#chat-panel { + display: flex; + flex-direction: row; + overflow: hidden; + background: var(--bg); +} + +#chat-sessions-col { + width: 220px; + min-width: 220px; + border-right: 1px solid var(--border); + display: flex; + flex-direction: column; + overflow: hidden; + background: var(--bg2); +} + +#chat-sessions-header { + padding: 12px 14px; + border-bottom: 1px solid var(--border); + flex-shrink: 0; +} + +#new-chat-btn { + width: 100%; + margin-bottom: 0; +} + +#chat-session-list { + flex: 1; + overflow-y: auto; + padding: 6px 0; +} + +#chat-session-list::-webkit-scrollbar { width: 3px; } +#chat-session-list::-webkit-scrollbar-thumb { background: var(--border2); border-radius: 2px; } + +.chat-session-item { + padding: 8px 14px; + cursor: pointer; + border-left: 2px solid transparent; + transition: all 0.15s; + font-size: 11px; + color: var(--text3); + white-space: nowrap; + overflow: hidden; + text-overflow: ellipsis; +} + +.chat-session-item:hover { background: var(--bg3); color: var(--text2); } +.chat-session-item.active { + border-left-color: var(--accent); + background: var(--accent-dim); + color: var(--accent); +} + +#chat-main-col { + flex: 1; + display: flex; + flex-direction: column; + overflow: hidden; +} + +#chat-messages { + flex: 1; + overflow-y: auto; + padding: 20px; + display: flex; + flex-direction: column; + gap: 16px; +} + +#chat-messages::-webkit-scrollbar { width: 4px; } +#chat-messages::-webkit-scrollbar-thumb { background: var(--border2); border-radius: 2px; } + +.chat-msg { + max-width: 85%; + animation: msg-in 0.2s ease; +} + +@keyframes msg-in { + from { opacity: 0; transform: translateY(6px); } + to { opacity: 1; transform: translateY(0); } +} + +.chat-msg.user { align-self: flex-end; } +.chat-msg.assistant { align-self: flex-start; } + +.chat-msg-bubble { + padding: 10px 14px; + border-radius: 8px; + font-size: 12px; + line-height: 1.6; + position: relative; +} + +.chat-msg.user .chat-msg-bubble { + background: var(--accent-dim); + border: 1px solid rgba(56,189,248,0.25); + color: var(--text); +} + +.chat-msg.assistant .chat-msg-bubble { + background: var(--bg2); + border: 1px solid var(--border2); + color: var(--text2); +} + +.chat-msg-meta { + display: flex; + align-items: center; + gap: 8px; + margin-top: 4px; + padding: 0 2px; +} + +.chat-msg-role { + font-size: 9px; + font-weight: 600; + letter-spacing: 0.08em; + text-transform: uppercase; + color: var(--text3); +} + +.chat-tts-btn { + background: none; + border: none; + cursor: pointer; + color: var(--text3); + font-size: 12px; + padding: 0 2px; + transition: color 0.15s; + line-height: 1; +} + +.chat-tts-btn:hover { color: var(--accent); } + +/* Tool call blocks */ +.tool-block { + background: var(--bg3); + border: 1px solid var(--border2); + border-radius: 6px; + margin: 8px 0; + overflow: hidden; + font-family: 'DM Mono', monospace; + font-size: 10px; +} + +.tool-block-header { + display: flex; + align-items: center; + gap: 8px; + padding: 6px 10px; + cursor: pointer; + background: var(--bg4); + user-select: none; +} + +.tool-block-name { + color: var(--accent); + font-weight: 500; +} + +.tool-block-toggle { + margin-left: auto; + color: var(--text3); + font-size: 9px; +} + +.tool-block-body { + padding: 8px 10px; + display: none; + border-top: 1px solid var(--border); + white-space: pre-wrap; + word-break: break-all; + color: var(--text2); + max-height: 200px; + overflow-y: auto; +} + +.tool-block-body.open { display: block; } + +.tool-result-content { + padding: 6px 10px; + color: #4ade80; + font-size: 10px; + font-family: 'DM Mono', monospace; + border-top: 1px solid var(--border); + max-height: 120px; + overflow-y: auto; + display: none; + white-space: pre-wrap; + word-break: break-all; +} + +.tool-result-content.show { display: block; } + +/* Markdown rendered in chat */ +.chat-md h1, .chat-md h2, .chat-md h3 { + color: var(--text); + font-family: 'Syne', sans-serif; + margin: 10px 0 5px; +} +.chat-md h1 { font-size: 15px; } +.chat-md h2 { font-size: 13px; } +.chat-md h3 { font-size: 12px; } +.chat-md p { margin: 5px 0; } +.chat-md code { + font-family: 'DM Mono', monospace; + background: var(--bg3); + padding: 1px 5px; + border-radius: 3px; + font-size: 11px; + color: var(--accent); +} +.chat-md pre { + background: var(--bg3); + border: 1px solid var(--border); + border-radius: 5px; + padding: 10px 12px; + overflow-x: auto; + margin: 8px 0; +} +.chat-md pre code { + background: none; + padding: 0; + color: var(--text2); +} +.chat-md ul, .chat-md ol { padding-left: 18px; margin: 5px 0; } +.chat-md li { margin: 2px 0; } +.chat-md strong { color: var(--text); font-weight: 600; } +.chat-md em { font-style: italic; color: var(--text2); } +.chat-md a { color: var(--accent); } +.chat-md hr { border: none; border-top: 1px solid var(--border); margin: 10px 0; } +.chat-md blockquote { + border-left: 3px solid var(--accent); + padding-left: 10px; + color: var(--text3); + margin: 6px 0; +} + +/* Chat input row */ +#chat-input-row { + display: flex; + align-items: flex-end; + gap: 8px; + padding: 12px 16px; + border-top: 1px solid var(--border); + background: var(--bg2); + flex-shrink: 0; +} + +#chat-textarea { + flex: 1; + background: var(--bg3); + border: 1px solid var(--border2); + border-radius: 6px; + color: var(--text); + font-family: 'DM Mono', monospace; + font-size: 12px; + padding: 9px 12px; + outline: none; + resize: none; + min-height: 40px; + max-height: 160px; + overflow-y: auto; + transition: border-color 0.15s; + line-height: 1.5; +} + +#chat-textarea:focus { border-color: rgba(56,189,248,0.4); } +#chat-textarea::placeholder { color: var(--text3); } + +#chat-send-btn { + flex-shrink: 0; + width: 38px; + height: 38px; + background: var(--accent-dim); + border: 1px solid rgba(56,189,248,0.3); + border-radius: 6px; + color: var(--accent); + cursor: pointer; + font-size: 16px; + display: flex; + align-items: center; + justify-content: center; + transition: all 0.15s; +} + +#chat-send-btn:hover { background: rgba(56,189,248,0.2); } +#chat-send-btn:disabled { opacity: 0.4; cursor: not-allowed; } + +#chat-tts-toggle { + flex-shrink: 0; + width: 38px; + height: 38px; + background: var(--bg3); + border: 1px solid var(--border2); + border-radius: 6px; + color: var(--text3); + cursor: pointer; + font-size: 14px; + display: flex; + align-items: center; + justify-content: center; + transition: all 0.15s; +} + +#chat-tts-toggle.active { + background: var(--accent-dim); + border-color: rgba(56,189,248,0.3); + color: var(--accent); +} + +/* System prompt collapsible */ +#chat-system-row { + padding: 8px 16px; + border-bottom: 1px solid var(--border); + background: var(--bg2); + flex-shrink: 0; +} + +#chat-system-toggle { + font-size: 9px; + font-weight: 600; + letter-spacing: 0.1em; + text-transform: uppercase; + color: var(--text3); + cursor: pointer; + display: flex; + align-items: center; + gap: 6px; + user-select: none; +} + +#chat-system-toggle:hover { color: var(--text2); } + +#chat-system-textarea { + display: none; + width: 100%; + margin-top: 8px; + background: var(--bg3); + border: 1px solid var(--border2); + border-radius: 4px; + color: var(--text2); + font-family: 'DM Mono', monospace; + font-size: 10px; + padding: 7px 10px; + outline: none; + resize: vertical; + min-height: 60px; +} + +#chat-system-textarea.open { display: block; } + +.chat-empty-state { + flex: 1; + display: flex; + flex-direction: column; + align-items: center; + justify-content: center; + gap: 12px; + color: var(--text3); + font-size: 12px; +} + +.chat-empty-icon { + font-size: 32px; + opacity: 0.3; +} + +.chat-thinking { + display: flex; + align-items: center; + gap: 6px; + padding: 8px 12px; + background: var(--bg2); + border: 1px solid var(--border); + border-radius: 8px; + font-size: 11px; + color: var(--text3); + font-family: 'DM Mono', monospace; + align-self: flex-start; +} + +.chat-thinking-dots { + display: flex; + gap: 3px; +} + +.chat-thinking-dots span { + width: 4px; height: 4px; + border-radius: 50%; + background: var(--text3); + animation: thinking-bounce 1.2s ease-in-out infinite; +} + +.chat-thinking-dots span:nth-child(2) { animation-delay: 0.2s; } +.chat-thinking-dots span:nth-child(3) { animation-delay: 0.4s; } + +@keyframes thinking-bounce { + 0%,80%,100% { transform: scale(0.6); opacity: 0.4; } + 40% { transform: scale(1); opacity: 1; } +} + +#chat-model-select { + background: var(--bg3); + border: 1px solid var(--border2); + border-radius: 4px; + color: var(--text2); + font-family: 'DM Mono', monospace; + font-size: 10px; + padding: 3px 6px; + outline: none; + flex-shrink: 0; +} @@ -1214,7 +1632,7 @@ tr { cursor: pointer; transition: background 0.1s; } Engram

Memory Studio
-
DEMO MODE
+
CONNECTING...
@@ -1379,7 +1798,46 @@ tr { cursor: pointer; transition: background 0.1s; }
engram> - + +
+
+ + + @@ -1508,57 +1966,65 @@ tr { cursor: pointer; transition: background 0.1s; } - - From dbff2dad7af44a587c7e2a7f8e8badb3621bd32a Mon Sep 17 00:00:00 2001 From: Will Anderson Date: Mon, 4 May 2026 08:55:23 -0500 Subject: [PATCH 14/18] add gitflow CI for dev/stage/prod environments --- engram/.gitea/workflows/ci-dev.yaml | 121 ++++++++++++++++++++ engram/.gitea/workflows/ci-stage.yaml | 118 +++++++++++++++++++ engram/.gitea/workflows/engram-release.yaml | 25 ++++ 3 files changed, 264 insertions(+) create mode 100644 engram/.gitea/workflows/ci-dev.yaml create mode 100644 engram/.gitea/workflows/ci-stage.yaml diff --git a/engram/.gitea/workflows/ci-dev.yaml b/engram/.gitea/workflows/ci-dev.yaml new file mode 100644 index 0000000..7463aa8 --- /dev/null +++ b/engram/.gitea/workflows/ci-dev.yaml @@ -0,0 +1,121 @@ +name: Engram CI — dev + +on: + push: + branches: + - dev + pull_request: + branches: + - dev + +jobs: + build-and-test: + runs-on: ubuntu-latest + + steps: + - name: Checkout + uses: actions/checkout@v4 + + - name: Install build dependencies + run: | + apt-get update -qq + apt-get install -y gcc libcurl4-openssl-dev + + # Install El SDK from dev artifact registry + - name: Install El SDK from dev registry + env: + GCP_SA_KEY: ${{ secrets.GCP_SA_KEY }} + run: | + echo "${GCP_SA_KEY}" > /tmp/gcp-key.json + apt-get install -y -qq apt-transport-https ca-certificates gnupg curl + curl -fsSL https://packages.cloud.google.com/apt/doc/apt-key.gpg | gpg --dearmor -o /usr/share/keyrings/cloud.google.gpg + echo "deb [signed-by=/usr/share/keyrings/cloud.google.gpg] https://packages.cloud.google.com/apt cloud-sdk main" > /etc/apt/sources.list.d/google-cloud-sdk.list + apt-get update -qq && apt-get install -y google-cloud-cli + gcloud auth activate-service-account --key-file=/tmp/gcp-key.json + gcloud config set project neuron-785695 + + mkdir -p /usr/local/bin /usr/local/lib/el + + # Download the latest-versioned elc from dev registry + # Fall back to the Gitea latest release if no dev artifact exists yet + LATEST_VERSION=$(gcloud artifacts versions list \ + --repository=foundation-dev \ + --location=us-central1 \ + --project=neuron-785695 \ + --package=el/elc \ + --format="value(name)" 2>/dev/null | sort | tail -1 | sed 's|.*/||' || true) + + if [ -n "${LATEST_VERSION}" ]; then + echo "Downloading elc ${LATEST_VERSION} from foundation-dev..." + gcloud artifacts generic download \ + --repository=foundation-dev \ + --location=us-central1 \ + --project=neuron-785695 \ + --package=el/elc \ + --version="${LATEST_VERSION}" \ + --destination=/usr/local/bin/elc + chmod +x /usr/local/bin/elc + else + echo "No dev artifact found, falling back to Gitea latest release..." + RELEASE_BASE="https://git.neuralplatform.ai/neuron-technologies/el/releases/download/latest" + curl -fsSL "${RELEASE_BASE}/elc" -o /usr/local/bin/elc + chmod +x /usr/local/bin/elc + fi + + # Always get runtime from Gitea latest release + RELEASE_BASE="https://git.neuralplatform.ai/neuron-technologies/el/releases/download/latest" + curl -fsSL "${RELEASE_BASE}/el_runtime.c" -o /usr/local/lib/el/el_runtime.c + curl -fsSL "${RELEASE_BASE}/el_runtime.h" -o /usr/local/lib/el/el_runtime.h + + echo "El SDK installed:" + elc --version || true + rm -f /tmp/gcp-key.json + + # Compile server.el → dist/engram.c + - name: Compile server.el + run: | + mkdir -p dist + elc src/server.el > dist/engram.c + echo "Compiled src/server.el → dist/engram.c" + + # Link to produce the engram binary + - name: Link engram binary + run: | + cc -std=c11 -O2 \ + -I /usr/local/lib/el \ + -o dist/engram \ + dist/engram.c \ + /usr/local/lib/el/el_runtime.c \ + -lcurl -lpthread + echo "Linked dist/engram" + ls -lh dist/engram + + # Run tests if spec directory contains runnable tests + - name: Run tests + run: | + if [ -f spec/run.sh ]; then + bash spec/run.sh + else + echo "No spec/run.sh found — skipping test run" + fi + + # Publish artifact to GCP Artifact Registry (dev) + - name: Publish engram to Artifact Registry (dev) + env: + GCP_SA_KEY: ${{ secrets.GCP_SA_KEY }} + run: | + echo "${GCP_SA_KEY}" > /tmp/gcp-key.json + gcloud auth activate-service-account --key-file=/tmp/gcp-key.json + gcloud config set project neuron-785695 + + VERSION="${GITEA_SHA:0:8}" + gcloud artifacts generic upload \ + --repository=foundation-dev \ + --location=us-central1 \ + --project=neuron-785695 \ + --package=engram/engram \ + --version="${VERSION}" \ + --source=dist/engram + + echo "Published engram version=${VERSION} to foundation-dev/engram/engram" + rm -f /tmp/gcp-key.json diff --git a/engram/.gitea/workflows/ci-stage.yaml b/engram/.gitea/workflows/ci-stage.yaml new file mode 100644 index 0000000..99a4a06 --- /dev/null +++ b/engram/.gitea/workflows/ci-stage.yaml @@ -0,0 +1,118 @@ +name: Engram CI — stage + +on: + push: + branches: + - stage + pull_request: + branches: + - stage + +jobs: + build-and-test: + runs-on: ubuntu-latest + + steps: + - name: Checkout + uses: actions/checkout@v4 + + - name: Install build dependencies + run: | + apt-get update -qq + apt-get install -y gcc libcurl4-openssl-dev + + # Install El SDK from stage artifact registry + - name: Install El SDK from stage registry + env: + GCP_SA_KEY: ${{ secrets.GCP_SA_KEY }} + run: | + echo "${GCP_SA_KEY}" > /tmp/gcp-key.json + apt-get install -y -qq apt-transport-https ca-certificates gnupg curl + curl -fsSL https://packages.cloud.google.com/apt/doc/apt-key.gpg | gpg --dearmor -o /usr/share/keyrings/cloud.google.gpg + echo "deb [signed-by=/usr/share/keyrings/cloud.google.gpg] https://packages.cloud.google.com/apt cloud-sdk main" > /etc/apt/sources.list.d/google-cloud-sdk.list + apt-get update -qq && apt-get install -y google-cloud-cli + gcloud auth activate-service-account --key-file=/tmp/gcp-key.json + gcloud config set project neuron-785695 + + mkdir -p /usr/local/bin /usr/local/lib/el + + LATEST_VERSION=$(gcloud artifacts versions list \ + --repository=foundation-stage \ + --location=us-central1 \ + --project=neuron-785695 \ + --package=el/elc \ + --format="value(name)" 2>/dev/null | sort | tail -1 | sed 's|.*/||' || true) + + if [ -n "${LATEST_VERSION}" ]; then + echo "Downloading elc ${LATEST_VERSION} from foundation-stage..." + gcloud artifacts generic download \ + --repository=foundation-stage \ + --location=us-central1 \ + --project=neuron-785695 \ + --package=el/elc \ + --version="${LATEST_VERSION}" \ + --destination=/usr/local/bin/elc + chmod +x /usr/local/bin/elc + else + echo "No stage artifact found, falling back to Gitea latest release..." + RELEASE_BASE="https://git.neuralplatform.ai/neuron-technologies/el/releases/download/latest" + curl -fsSL "${RELEASE_BASE}/elc" -o /usr/local/bin/elc + chmod +x /usr/local/bin/elc + fi + + RELEASE_BASE="https://git.neuralplatform.ai/neuron-technologies/el/releases/download/latest" + curl -fsSL "${RELEASE_BASE}/el_runtime.c" -o /usr/local/lib/el/el_runtime.c + curl -fsSL "${RELEASE_BASE}/el_runtime.h" -o /usr/local/lib/el/el_runtime.h + + echo "El SDK installed:" + elc --version || true + rm -f /tmp/gcp-key.json + + # Compile server.el → dist/engram.c + - name: Compile server.el + run: | + mkdir -p dist + elc src/server.el > dist/engram.c + echo "Compiled src/server.el → dist/engram.c" + + # Link to produce the engram binary + - name: Link engram binary + run: | + cc -std=c11 -O2 \ + -I /usr/local/lib/el \ + -o dist/engram \ + dist/engram.c \ + /usr/local/lib/el/el_runtime.c \ + -lcurl -lpthread + echo "Linked dist/engram" + ls -lh dist/engram + + # Run tests if spec directory contains runnable tests + - name: Run tests + run: | + if [ -f spec/run.sh ]; then + bash spec/run.sh + else + echo "No spec/run.sh found — skipping test run" + fi + + # Publish artifact to GCP Artifact Registry (stage) + - name: Publish engram to Artifact Registry (stage) + env: + GCP_SA_KEY: ${{ secrets.GCP_SA_KEY }} + run: | + echo "${GCP_SA_KEY}" > /tmp/gcp-key.json + gcloud auth activate-service-account --key-file=/tmp/gcp-key.json + gcloud config set project neuron-785695 + + VERSION="${GITEA_SHA:0:8}" + gcloud artifacts generic upload \ + --repository=foundation-stage \ + --location=us-central1 \ + --project=neuron-785695 \ + --package=engram/engram \ + --version="${VERSION}" \ + --source=dist/engram + + echo "Published engram version=${VERSION} to foundation-stage/engram/engram" + rm -f /tmp/gcp-key.json diff --git a/engram/.gitea/workflows/engram-release.yaml b/engram/.gitea/workflows/engram-release.yaml index d0e1722..0b07a5b 100644 --- a/engram/.gitea/workflows/engram-release.yaml +++ b/engram/.gitea/workflows/engram-release.yaml @@ -110,6 +110,31 @@ jobs: echo "Release published successfully" + # Publish artifact to GCP Artifact Registry (prod) + - name: Publish engram to Artifact Registry (prod) + env: + GCP_SA_KEY: ${{ secrets.GCP_SA_KEY }} + run: | + echo "${GCP_SA_KEY}" > /tmp/gcp-key.json + apt-get install -y -qq apt-transport-https ca-certificates gnupg curl + curl -fsSL https://packages.cloud.google.com/apt/doc/apt-key.gpg | gpg --dearmor -o /usr/share/keyrings/cloud.google.gpg + echo "deb [signed-by=/usr/share/keyrings/cloud.google.gpg] https://packages.cloud.google.com/apt cloud-sdk main" > /etc/apt/sources.list.d/google-cloud-sdk.list + apt-get update -qq && apt-get install -y google-cloud-cli + gcloud auth activate-service-account --key-file=/tmp/gcp-key.json + gcloud config set project neuron-785695 + + VERSION="${GITEA_SHA:0:8}" + gcloud artifacts generic upload \ + --repository=foundation-prod \ + --location=us-central1 \ + --project=neuron-785695 \ + --package=engram/engram \ + --version="${VERSION}" \ + --source=dist/engram + + echo "Published engram version=${VERSION} to foundation-prod/engram/engram" + rm -f /tmp/gcp-key.json + # Dispatch engram-updated to any downstream dependents - name: Dispatch engram-updated to dependents env: From cd164debb8b8a33e8fe90d4b3c04e6abdb32b4a5 Mon Sep 17 00:00:00 2001 From: Will Anderson Date: Mon, 4 May 2026 11:44:22 -0500 Subject: [PATCH 15/18] add /nodes/list as alias for GET /nodes Dharma's EngramDB client calls /nodes/list to retrieve all nodes. Add this as an alias for the existing /nodes (and /api/nodes) route so downstream clients don't need to be updated when the API drifts. Also update dist/engram.c to match server.el. --- engram/dist/engram.c | 376 +++++++++++++++++++++++++++++++++++++++++++ engram/src/server.el | 2 +- 2 files changed, 377 insertions(+), 1 deletion(-) create mode 100644 engram/dist/engram.c diff --git a/engram/dist/engram.c b/engram/dist/engram.c new file mode 100644 index 0000000..b5fe865 --- /dev/null +++ b/engram/dist/engram.c @@ -0,0 +1,376 @@ +#include +#include +#include "el_runtime.h" + +el_val_t parse_port(el_val_t bind); +el_val_t ok_json(void); +el_val_t err_json(el_val_t msg); +el_val_t strip_query(el_val_t path); +el_val_t query_param(el_val_t path, el_val_t key); +el_val_t query_int(el_val_t path, el_val_t key, el_val_t default_val); +el_val_t extract_id(el_val_t path, el_val_t prefix); +el_val_t route_stats(el_val_t method, el_val_t path, el_val_t body); +el_val_t route_create_node(el_val_t method, el_val_t path, el_val_t body); +el_val_t route_get_node(el_val_t method, el_val_t path, el_val_t body); +el_val_t route_scan_nodes(el_val_t method, el_val_t path, el_val_t body); +el_val_t route_scan_edges(el_val_t method, el_val_t path, el_val_t body); +el_val_t route_search(el_val_t method, el_val_t path, el_val_t body); +el_val_t route_activate(el_val_t method, el_val_t path, el_val_t body); +el_val_t route_create_edge(el_val_t method, el_val_t path, el_val_t body); +el_val_t route_neighbors(el_val_t method, el_val_t path, el_val_t body); +el_val_t route_strengthen(el_val_t method, el_val_t path, el_val_t body); +el_val_t route_forget(el_val_t method, el_val_t path, el_val_t body); +el_val_t route_save(el_val_t method, el_val_t path, el_val_t body); +el_val_t route_load(el_val_t method, el_val_t path, el_val_t body); +el_val_t route_health(el_val_t method, el_val_t path, el_val_t body); +el_val_t check_auth_ok(el_val_t method, el_val_t body); +el_val_t handle_request(el_val_t method, el_val_t path, el_val_t body); + +el_val_t bind_str; +el_val_t port; +el_val_t data_dir; +el_val_t snapshot_path; + +el_val_t parse_port(el_val_t bind) { + el_val_t colon = str_index_of(bind, EL_STR(":")); + if (colon < 0) { + return str_to_int(bind); + } + el_val_t after = str_slice(bind, (colon + 1), str_len(bind)); + return str_to_int(after); + return 0; +} + +el_val_t ok_json(void) { + return EL_STR("{\"ok\":true}"); + return 0; +} + +el_val_t err_json(el_val_t msg) { + return el_str_concat(el_str_concat(EL_STR("{\"error\":\""), msg), EL_STR("\"}")); + return 0; +} + +el_val_t strip_query(el_val_t path) { + el_val_t q = str_index_of(path, EL_STR("?")); + if (q < 0) { + return path; + } + return str_slice(path, 0, q); + return 0; +} + +el_val_t query_param(el_val_t path, el_val_t key) { + el_val_t q = str_index_of(path, EL_STR("?")); + if (q < 0) { + return EL_STR(""); + } + el_val_t qs = str_slice(path, (q + 1), str_len(path)); + el_val_t needle = el_str_concat(key, EL_STR("=")); + el_val_t pos = str_index_of(qs, needle); + if (pos < 0) { + return EL_STR(""); + } + el_val_t after = str_slice(qs, (pos + str_len(needle)), str_len(qs)); + el_val_t amp = str_index_of(after, EL_STR("&")); + if (amp < 0) { + return after; + } + return str_slice(after, 0, amp); + return 0; +} + +el_val_t query_int(el_val_t path, el_val_t key, el_val_t default_val) { + el_val_t v = query_param(path, key); + if (str_eq(v, EL_STR(""))) { + return default_val; + } + return str_to_int(v); + return 0; +} + +el_val_t extract_id(el_val_t path, el_val_t prefix) { + el_val_t clean = strip_query(path); + if (!str_starts_with(clean, prefix)) { + return EL_STR(""); + } + el_val_t after = str_slice(clean, str_len(prefix), str_len(clean)); + el_val_t slash = str_index_of(after, EL_STR("/")); + if (slash < 0) { + return after; + } + return str_slice(after, 0, slash); + return 0; +} + +el_val_t route_stats(el_val_t method, el_val_t path, el_val_t body) { + return engram_stats_json(); + return 0; +} + +el_val_t route_create_node(el_val_t method, el_val_t path, el_val_t body) { + el_val_t content = json_get_string(body, EL_STR("content")); + el_val_t node_type = json_get_string(body, EL_STR("node_type")); + if (str_eq(node_type, EL_STR(""))) { + node_type = EL_STR("Memory"); + } + el_val_t salience = json_get_float(body, EL_STR("salience")); + if (str_eq(salience, el_from_float(0.0))) { + salience = el_from_float(0.5); + } + el_val_t id = engram_node(content, node_type, salience); + return el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(EL_STR("{\"id\":\""), id), EL_STR("\",\"content\":\"")), content), EL_STR("\",\"node_type\":\"")), node_type), EL_STR("\"}")); + return 0; +} + +el_val_t route_get_node(el_val_t method, el_val_t path, el_val_t body) { + el_val_t id = extract_id(path, EL_STR("/api/nodes/")); + if (str_eq(id, EL_STR(""))) { + return err_json(EL_STR("missing id")); + } + return engram_get_node_json(id); + return 0; +} + +el_val_t route_scan_nodes(el_val_t method, el_val_t path, el_val_t body) { + el_val_t limit = query_int(path, EL_STR("limit"), 50); + el_val_t offset = query_int(path, EL_STR("offset"), 0); + el_val_t nt = query_param(path, EL_STR("node_type")); + if (str_eq(nt, EL_STR(""))) { + return engram_scan_nodes_json(limit, offset); + } + return engram_scan_nodes_by_type_json(nt, limit, offset); + return 0; +} + +el_val_t route_scan_edges(el_val_t method, el_val_t path, el_val_t body) { + el_val_t dir = env(EL_STR("ENGRAM_DATA_DIR")); + if (str_eq(dir, EL_STR(""))) { + dir = EL_STR("/tmp/engram"); + } + el_val_t snap_path = el_str_concat(dir, EL_STR("/snapshot.json")); + engram_save(snap_path); + el_val_t snap = fs_read(snap_path); + if (str_eq(snap, EL_STR(""))) { + return EL_STR("[]"); + } + el_val_t edges = json_get_raw(snap, EL_STR("edges")); + if (str_eq(edges, EL_STR(""))) { + return EL_STR("[]"); + } + return edges; + return 0; +} + +el_val_t route_search(el_val_t method, el_val_t path, el_val_t body) { + el_val_t q = EL_STR(""); + if (str_eq(method, EL_STR("GET"))) { + q = query_param(path, EL_STR("q")); + } else { + q = json_get_string(body, EL_STR("query")); + } + el_val_t limit = query_int(path, EL_STR("limit"), 20); + if (limit == 0) { + limit = json_get_int(body, EL_STR("limit")); + } + if (limit == 0) { + limit = 20; + } + return engram_search_json(q, limit); + return 0; +} + +el_val_t route_activate(el_val_t method, el_val_t path, el_val_t body) { + el_val_t q = EL_STR(""); + el_val_t depth = 3; + if (str_eq(method, EL_STR("GET"))) { + q = query_param(path, EL_STR("q")); + depth = query_int(path, EL_STR("depth"), 3); + } else { + q = json_get_string(body, EL_STR("query")); + el_val_t bd = json_get_int(body, EL_STR("depth")); + if (bd > 0) { + depth = bd; + } + } + return el_str_concat(el_str_concat(EL_STR("{\"results\":"), engram_activate_json(q, depth)), EL_STR("}")); + return 0; +} + +el_val_t route_create_edge(el_val_t method, el_val_t path, el_val_t body) { + el_val_t from_id = json_get_string(body, EL_STR("from_id")); + el_val_t to_id = json_get_string(body, EL_STR("to_id")); + el_val_t relation = json_get_string(body, EL_STR("relation")); + if (str_eq(relation, EL_STR(""))) { + relation = EL_STR("associates"); + } + el_val_t weight = json_get_float(body, EL_STR("weight")); + if (str_eq(weight, el_from_float(0.0))) { + weight = el_from_float(0.5); + } + engram_connect(from_id, to_id, weight, relation); + return el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(EL_STR("{\"ok\":true,\"from_id\":\""), from_id), EL_STR("\",\"to_id\":\"")), to_id), EL_STR("\",\"relation\":\"")), relation), EL_STR("\"}")); + return 0; +} + +el_val_t route_neighbors(el_val_t method, el_val_t path, el_val_t body) { + el_val_t id = extract_id(path, EL_STR("/api/neighbors/")); + if (str_eq(id, EL_STR(""))) { + return err_json(EL_STR("missing id")); + } + el_val_t depth = query_int(path, EL_STR("depth"), 1); + return engram_neighbors_json(id, depth, EL_STR("both")); + return 0; +} + +el_val_t route_strengthen(el_val_t method, el_val_t path, el_val_t body) { + el_val_t id = json_get_string(body, EL_STR("node_id")); + if (str_eq(id, EL_STR(""))) { + return err_json(EL_STR("missing node_id")); + } + engram_strengthen(id); + return ok_json(); + return 0; +} + +el_val_t route_forget(el_val_t method, el_val_t path, el_val_t body) { + el_val_t id = extract_id(path, EL_STR("/api/nodes/")); + if (str_eq(id, EL_STR(""))) { + return err_json(EL_STR("missing id")); + } + engram_forget(id); + return ok_json(); + return 0; +} + +el_val_t route_save(el_val_t method, el_val_t path, el_val_t body) { + el_val_t p = json_get_string(body, EL_STR("path")); + if (str_eq(p, EL_STR(""))) { + el_val_t dir = env(EL_STR("ENGRAM_DATA_DIR")); + if (str_eq(dir, EL_STR(""))) { + dir = EL_STR("/tmp/engram"); + } + p = el_str_concat(dir, EL_STR("/snapshot.json")); + } + engram_save(p); + return el_str_concat(el_str_concat(EL_STR("{\"ok\":true,\"path\":\""), p), EL_STR("\"}")); + return 0; +} + +el_val_t route_load(el_val_t method, el_val_t path, el_val_t body) { + el_val_t p = json_get_string(body, EL_STR("path")); + if (str_eq(p, EL_STR(""))) { + el_val_t dir = env(EL_STR("ENGRAM_DATA_DIR")); + if (str_eq(dir, EL_STR(""))) { + dir = EL_STR("/tmp/engram"); + } + p = el_str_concat(dir, EL_STR("/snapshot.json")); + } + engram_load(p); + return ok_json(); + return 0; +} + +el_val_t route_health(el_val_t method, el_val_t path, el_val_t body) { + return EL_STR("{\"status\":\"ok\",\"engine\":\"engram-runtime-native\"}"); + return 0; +} + +el_val_t check_auth_ok(el_val_t method, el_val_t body) { + el_val_t key = env(EL_STR("ENGRAM_API_KEY")); + if (str_eq(key, EL_STR(""))) { + return 1; + } + if (str_eq(method, EL_STR("GET"))) { + return 1; + } + el_val_t provided = json_get_string(body, EL_STR("_auth")); + if (str_eq(provided, key)) { + return 1; + } + return 0; + return 0; +} + +el_val_t handle_request(el_val_t method, el_val_t path, el_val_t body) { + el_val_t clean = strip_query(path); + if (str_eq(method, EL_STR("GET"))) { + if (str_eq(clean, EL_STR("/health")) || str_eq(clean, EL_STR("/"))) { + return route_health(method, path, body); + } + } + if (!check_auth_ok(method, body)) { + return err_json(EL_STR("unauthorized")); + } + if (str_eq(method, EL_STR("GET")) && (str_eq(clean, EL_STR("/api/stats")) || str_eq(clean, EL_STR("/stats")))) { + return route_stats(method, path, body); + } + if (str_eq(method, EL_STR("POST")) && (str_eq(clean, EL_STR("/api/nodes")) || str_eq(clean, EL_STR("/nodes")))) { + return route_create_node(method, path, body); + } + if (str_eq(method, EL_STR("GET")) && (str_eq(clean, EL_STR("/api/nodes")) || str_eq(clean, EL_STR("/nodes")) || str_eq(clean, EL_STR("/nodes/list")) || str_eq(clean, EL_STR("/api/nodes/list")))) { + return route_scan_nodes(method, path, body); + } + if (str_eq(method, EL_STR("GET")) && (str_eq(clean, EL_STR("/api/edges")) || str_eq(clean, EL_STR("/edges")))) { + return route_scan_edges(method, path, body); + } + if (str_eq(method, EL_STR("GET")) && str_starts_with(clean, EL_STR("/api/nodes/"))) { + return route_get_node(method, path, body); + } + if (str_eq(method, EL_STR("DELETE")) && str_starts_with(clean, EL_STR("/api/nodes/"))) { + return route_forget(method, path, body); + } + if (str_eq(method, EL_STR("POST")) && (str_eq(clean, EL_STR("/api/edges")) || str_eq(clean, EL_STR("/edges")))) { + return route_create_edge(method, path, body); + } + if (str_eq(method, EL_STR("GET")) && str_starts_with(clean, EL_STR("/api/neighbors/"))) { + return route_neighbors(method, path, body); + } + if (str_eq(method, EL_STR("POST")) && (str_eq(clean, EL_STR("/api/activate")) || str_eq(clean, EL_STR("/activate")))) { + return route_activate(method, path, body); + } + if (str_eq(method, EL_STR("GET")) && str_starts_with(clean, EL_STR("/api/activate"))) { + return route_activate(method, path, body); + } + if (str_eq(method, EL_STR("POST")) && (str_eq(clean, EL_STR("/api/search")) || str_eq(clean, EL_STR("/search")))) { + return route_search(method, path, body); + } + if (str_eq(method, EL_STR("GET")) && str_starts_with(clean, EL_STR("/api/search"))) { + return route_search(method, path, body); + } + if (str_eq(method, EL_STR("POST")) && (str_eq(clean, EL_STR("/api/strengthen")) || str_eq(clean, EL_STR("/strengthen")))) { + return route_strengthen(method, path, body); + } + if (str_eq(method, EL_STR("POST")) && (str_eq(clean, EL_STR("/api/save")) || str_eq(clean, EL_STR("/save")))) { + return route_save(method, path, body); + } + if (str_eq(method, EL_STR("POST")) && (str_eq(clean, EL_STR("/api/load")) || str_eq(clean, EL_STR("/load")))) { + return route_load(method, path, body); + } + return el_str_concat(el_str_concat(EL_STR("{\"error\":\"not found\",\"path\":\""), clean), EL_STR("\"}")); + return 0; +} + +int main(int argc, char** argv) { + el_runtime_init_args(argc, argv); + bind_str = env(EL_STR("ENGRAM_BIND")); + if (str_eq(bind_str, EL_STR(""))) { + bind_str = EL_STR(":8742"); + } + port = parse_port(bind_str); + data_dir = env(EL_STR("ENGRAM_DATA_DIR")); + if (str_eq(data_dir, EL_STR(""))) { + data_dir = EL_STR("/tmp/engram"); + } + snapshot_path = el_str_concat(data_dir, EL_STR("/snapshot.json")); + engram_load(snapshot_path); + println(EL_STR("[engram] runtime-native graph engine")); + println(el_str_concat(EL_STR("[engram] data_dir="), data_dir)); + println(el_str_concat(EL_STR("[engram] node_count="), int_to_str(engram_node_count()))); + println(el_str_concat(EL_STR("[engram] edge_count="), int_to_str(engram_edge_count()))); + println(el_str_concat(EL_STR("[engram] listening on "), int_to_str(port))); + http_set_handler(EL_STR("handle_request")); + http_serve(port, EL_STR("handle_request")); + return 0; +} + diff --git a/engram/src/server.el b/engram/src/server.el index e379690..ebaf34a 100644 --- a/engram/src/server.el +++ b/engram/src/server.el @@ -246,7 +246,7 @@ fn handle_request(method: String, path: String, body: String) -> String { if str_eq(method, "POST") && (str_eq(clean, "/api/nodes") || str_eq(clean, "/nodes")) { return route_create_node(method, path, body) } - if str_eq(method, "GET") && (str_eq(clean, "/api/nodes") || str_eq(clean, "/nodes")) { + if str_eq(method, "GET") && (str_eq(clean, "/api/nodes") || str_eq(clean, "/nodes") || str_eq(clean, "/nodes/list") || str_eq(clean, "/api/nodes/list")) { return route_scan_nodes(method, path, body) } if str_eq(method, "GET") && (str_eq(clean, "/api/edges") || str_eq(clean, "/edges")) { From 38d1905f1d3410be4a224c32b1c57d0fc078d11c Mon Sep 17 00:00:00 2001 From: Will Anderson Date: Mon, 4 May 2026 19:32:08 -0500 Subject: [PATCH 16/18] Wire engram-updated dispatch to elql Replace placeholder comment with actual curl dispatch call that fires engram-updated to neuron-technologies/elql on every Engram release. --- engram/.gitea/workflows/engram-release.yaml | 18 ++++++++---------- 1 file changed, 8 insertions(+), 10 deletions(-) diff --git a/engram/.gitea/workflows/engram-release.yaml b/engram/.gitea/workflows/engram-release.yaml index 0b07a5b..4de119c 100644 --- a/engram/.gitea/workflows/engram-release.yaml +++ b/engram/.gitea/workflows/engram-release.yaml @@ -135,17 +135,15 @@ jobs: echo "Published engram version=${VERSION} to foundation-prod/engram/engram" rm -f /tmp/gcp-key.json - # Dispatch engram-updated to any downstream dependents - - name: Dispatch engram-updated to dependents + # Dispatch engram-updated to downstream dependents + - name: Dispatch engram-updated to elql env: GITEA_TOKEN: ${{ secrets.GITEA_TOKEN }} GITEA_API: https://git.neuralplatform.ai/api/v1 run: | - # Add downstream repos here as the dependency graph grows - echo "engram-updated dispatch ready (no downstream targets configured yet)" - # Example: - # curl -sf -X POST \ - # -H "Authorization: token ${GITEA_TOKEN}" \ - # -H "Content-Type: application/json" \ - # "${GITEA_API}/repos/neuron-technologies/some-service/dispatches" \ - # -d '{"type":"engram-updated","inputs":{"engram_version":"latest","commit":"'"${GITHUB_SHA}"'"}}' + curl -sf -X POST \ + -H "Authorization: token ${GITEA_TOKEN}" \ + -H "Content-Type: application/json" \ + "${GITEA_API}/repos/neuron-technologies/elql/dispatches" \ + -d "{\"type\":\"engram-updated\",\"inputs\":{\"engram_version\":\"latest\",\"commit\":\"${GITHUB_SHA}\"}}" + echo "Dispatched engram-updated to neuron-technologies/elql" From 26e327ac6225220839ace40ecbf1d3509e3580f2 Mon Sep 17 00:00:00 2001 From: Will Anderson Date: Mon, 4 May 2026 19:34:51 -0500 Subject: [PATCH 17/18] =?UTF-8?q?enforce=20source=20branch=20in=20CI:=20st?= =?UTF-8?q?age=E2=86=90dev,=20main=E2=86=90stage?= MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit --- engram/.gitea/workflows/ci-stage.yaml | 10 ++++++++++ engram/.gitea/workflows/engram-release.yaml | 10 ++++++++++ 2 files changed, 20 insertions(+) diff --git a/engram/.gitea/workflows/ci-stage.yaml b/engram/.gitea/workflows/ci-stage.yaml index 99a4a06..69ed162 100644 --- a/engram/.gitea/workflows/ci-stage.yaml +++ b/engram/.gitea/workflows/ci-stage.yaml @@ -16,6 +16,16 @@ jobs: - name: Checkout uses: actions/checkout@v4 + - name: Enforce source branch (stage ← dev only) + if: github.event_name == 'pull_request' + run: | + SOURCE="${GITHUB_HEAD_REF}" + if [ "${SOURCE}" != "dev" ]; then + echo "ERROR: Stage branch only accepts PRs from 'dev'. Source was: '${SOURCE}'" + exit 1 + fi + echo "Source branch check passed: ${SOURCE} → stage" + - name: Install build dependencies run: | apt-get update -qq diff --git a/engram/.gitea/workflows/engram-release.yaml b/engram/.gitea/workflows/engram-release.yaml index 4de119c..bdf3258 100644 --- a/engram/.gitea/workflows/engram-release.yaml +++ b/engram/.gitea/workflows/engram-release.yaml @@ -16,6 +16,16 @@ jobs: - name: Checkout uses: actions/checkout@v4 + - name: Enforce source branch (main ← stage only) + if: github.event_name == 'pull_request' + run: | + SOURCE="${GITHUB_HEAD_REF}" + if [ "${SOURCE}" != "stage" ]; then + echo "ERROR: Main branch only accepts PRs from 'stage'. Source was: '${SOURCE}'" + exit 1 + fi + echo "Source branch check passed: ${SOURCE} → main" + - name: Install build dependencies run: | apt-get update -qq From deb7faba7fbcaa755831efccc949f3cab4574709 Mon Sep 17 00:00:00 2001 From: Will Anderson Date: Mon, 4 May 2026 20:17:14 -0500 Subject: [PATCH 18/18] ci: retrigger after ci-base image rebuild