fix(instance): run bootstrap from instance store (#25475)

packages/opencode/src/server/routes/instance/httpapi/groups/global.ts

@@ -1,6 +1,7 @@
 import { Config } from "@/config/config"
 import { BusEvent } from "@/bus/bus-event"
 import { SyncEvent } from "@/sync"
+import "@/server/event"
 import { Schema } from "effect"
 import { HttpApi, HttpApiEndpoint, HttpApiError, HttpApiGroup, OpenApi } from "effect/unstable/httpapi"
 import { described } from "./metadata"

packages/opencode/src/server/routes/instance/httpapi/handlers/config.ts

@@ -16,7 +16,7 @@ export const configHandlers = HttpApiBuilder.group(InstanceHttpApi, "config", (h
     })
 
     const update = Effect.fn("ConfigHttpApi.update")(function* (ctx) {
-      yield* configSvc.update(ctx.payload, { dispose: false })
+      yield* configSvc.update(ctx.payload)
       yield* markInstanceForDisposal(yield* InstanceState.context)
       return ctx.payload
     })

packages/opencode/src/server/routes/instance/httpapi/handlers/global.ts

@@ -1,7 +1,8 @@
 import { Config } from "@/config/config"
 import { GlobalBus, type GlobalEvent as GlobalBusEvent } from "@/bus/global"
+import { EffectBridge } from "@/effect/bridge"
 import { Installation } from "@/installation"
-import { InstanceStore } from "@/project/instance-store"
+import { disposeAllInstancesAndEmitGlobalDisposed } from "@/server/global-lifecycle"
 import { InstallationVersion } from "@opencode-ai/core/installation/version"
 import * as Log from "@opencode-ai/core/util/log"
 import { Effect, Queue, Schema } from "effect"
@@ -68,7 +69,7 @@ export const globalHandlers = HttpApiBuilder.group(RootHttpApi, "global", (handl
   Effect.gen(function* () {
     const config = yield* Config.Service
     const installation = yield* Installation.Service
-    const store = yield* InstanceStore.Service
+    const bridge = yield* EffectBridge.make()
 
     const health = Effect.fn("GlobalHttpApi.health")(function* () {
       return { healthy: true as const, version: InstallationVersion }
@@ -83,15 +84,13 @@ export const globalHandlers = HttpApiBuilder.group(RootHttpApi, "global", (handl
     })
 
     const configUpdate = Effect.fn("GlobalHttpApi.configUpdate")(function* (ctx) {
-      return yield* config.updateGlobal(ctx.payload)
+      const result = yield* config.updateGlobal(ctx.payload)
+      if (result.changed) bridge.fork(disposeAllInstancesAndEmitGlobalDisposed({ swallowErrors: true }))
+      return result.info
     })
 
     const dispose = Effect.fn("GlobalHttpApi.dispose")(function* () {
-      yield* store.disposeAll()
-      GlobalBus.emit("event", {
-        directory: "global",
-        payload: { type: "global.disposed", properties: {} },
-      })
+      yield* disposeAllInstancesAndEmitGlobalDisposed()
       return true
     })
 

packages/opencode/src/server/routes/instance/httpapi/middleware/instance-context.ts

@@ -1,5 +1,4 @@
 import { WorkspaceRef } from "@/effect/instance-ref"
-import { InstanceBootstrap } from "@/project/bootstrap"
 import { InstanceStore } from "@/project/instance-store"
 import { Effect, Layer } from "effect"
 import { HttpRouter, HttpServerResponse } from "effect/unstable/http"
@@ -24,12 +23,11 @@ function decode(input: string): string {
 function provideInstanceContext<E>(
   effect: Effect.Effect<HttpServerResponse.HttpServerResponse, E>,
   store: InstanceStore.Interface,
-  bootstrap: InstanceBootstrap.Interface,
 ): Effect.Effect<HttpServerResponse.HttpServerResponse, E, WorkspaceRouteContext> {
   return Effect.gen(function* () {
     const route = yield* WorkspaceRouteContext
     return yield* store.provide(
-      { directory: decode(route.directory), init: bootstrap.run },
+      { directory: decode(route.directory) },
       effect.pipe(Effect.provideService(WorkspaceRef, route.workspaceID)),
     )
   })
@@ -39,15 +37,13 @@ export const instanceContextLayer = Layer.effect(
   InstanceContextMiddleware,
   Effect.gen(function* () {
     const store = yield* InstanceStore.Service
-    const bootstrap = yield* InstanceBootstrap.Service
-    return InstanceContextMiddleware.of((effect) => provideInstanceContext(effect, store, bootstrap))
+    return InstanceContextMiddleware.of((effect) => provideInstanceContext(effect, store))
   }),
 )
 
 export const instanceRouterMiddleware = HttpRouter.middleware()(
   Effect.gen(function* () {
     const store = yield* InstanceStore.Service
-    const bootstrap = yield* InstanceBootstrap.Service
-    return (effect) => provideInstanceContext(effect, store, bootstrap)
+    return (effect) => provideInstanceContext(effect, store)
   }),
 )

packages/opencode/src/server/routes/instance/httpapi/server.ts

@@ -18,8 +18,7 @@ import { LSP } from "@/lsp/lsp"
 import { MCP } from "@/mcp"
 import { Permission } from "@/permission"
 import { Installation } from "@/installation"
-import { InstanceBootstrap } from "@/project/bootstrap"
-import { InstanceStore } from "@/project/instance-store"
+import { InstanceRuntime } from "@/project/instance-runtime"
 import { Plugin } from "@/plugin"
 import { Project } from "@/project/project"
 import { ProviderAuth } from "@/provider/auth"
@@ -153,8 +152,7 @@ export function createRoutes(corsOptions?: CorsOptions) {
       Format.defaultLayer,
       LSP.defaultLayer,
       Installation.defaultLayer,
-      InstanceBootstrap.defaultLayer,
-      InstanceStore.defaultLayer,
+      InstanceRuntime.layer,
       MCP.defaultLayer,
       ModelsDev.defaultLayer,
       Permission.defaultLayer,