refactor(core): consolidate references (#31539)

packages/opencode/src/tool/grep.ts

@@ -6,7 +6,6 @@ import { Search } from "@opencode-ai/core/filesystem/search"
 import { assertExternalDirectoryEffect } from "./external-directory"
 import DESCRIPTION from "./grep.txt"
 import * as Tool from "./tool"
-import { Reference } from "@/reference/reference"
 
 const MAX_LINE_LENGTH = 2000
 
@@ -25,7 +24,6 @@ export const GrepTool = Tool.define(
   Effect.gen(function* () {
     const fs = yield* FSUtil.Service
     const searchSvc = yield* Search.Service
-    const reference = yield* Reference.Service
 
     return {
       description: DESCRIPTION,
@@ -56,10 +54,9 @@ export const GrepTool = Tool.define(
           const requested = path.isAbsolute(params.path ?? ins.directory)
             ? (params.path ?? ins.directory)
             : path.join(ins.directory, params.path ?? ".")
-          yield* reference.ensure(requested)
           const requestedInfo = yield* fs.stat(requested).pipe(Effect.catch(() => Effect.succeed(undefined)))
           yield* assertExternalDirectoryEffect(ctx, requested, {
-            bypass: yield* reference.contains(requested),
+            bypass: false,
             kind: requestedInfo?.type === "Directory" ? "directory" : "file",
           })