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Three verified, currently-live problems, each closed with real evidence (full trace kept in Neuron memory, tags neuron-technologies/neuron,build-audit): 1. dist/soul.c was stale relative to main's own chat.el (11 commits / 459 lines behind, missing PR #122's OpenAI-tools + agentic-loop work and its two "silently break chat" fixes). tools/soulc-stamp.sh --check confirmed it; tools/build-soul-from-dist.sh correctly refused to build (exit 9). Regenerated and re-stamped. No runnable regen script existed anywhere upstream — added tools/regenerate-soul-amalgam.sh, which reproduces the committed amalgam's exact symbol set (byte-for-byte content match, modulo the genuinely new PR #122 functions) and is documented end-to-end in AGENTS.md, including three real elc/elb toolchain gotchas found and root-caused along the way (stale .elh caches silently truncating builds; elb cannot produce this repo's single-TU amalgam; elc silently drops the first function(s) after a comment block in a flat-concatenated compile). 2. tools/build-soul-from-dist.sh failed to link on macOS (`ld: library 'ssl' not found` — Homebrew's openssl@3 is keg-only) and was missing -lssl -lcrypto entirely, drifted from CI's own working recipe. Fixed: adds -L$(brew --prefix openssl@3)/lib on Darwin, matches CI's link line. Verified: dist/neuron now builds and boots clean on a throwaway port/HOME (never touched the live :7770/:8742). 3. Untracked committed *.elh compiler-header caches (elc/elb prefer a stale cached header over recompiling its source, silently, with no error — this is what caused an under-resolved 251-2541-function amalgam multiple times during this audit before the cause was found). Removed from git, gitignored going forward. Also: AGENTS.md and README.md existed on disk but were never committed (git log on both returned nothing) and documented the pre-collapse ~90-tool MCP surface as current. Committed corrected versions reflecting the live 9-op surface (read/write/relate/supersede/think/attend/assert/ground/learn, merged in #153) and the audit-verified build recipe/port topology. Added connectd/ — a minimal local-dev stub for the neuron-connectd MCP sidecar. routes.el/chat.el call 127.0.0.1:7771 for it right now on every soul boot and agentic turn per a real, detailed 2026-06-13 spec (mcp-connectors-adoption-spec.md); the sidecar itself was never built. Meanwhile :7771 is a live three-way collision (axon's unbuilt-Rust default, this connectd contract, and council — the anti-confabulation service actually running there in prod, which live-answers both other things' requests with unrelated 404s instead of a clean bridge-down signal). This stub only implements the documented contract as "zero connectors configured" for local-dev correctness; it does not attempt OAuth or a real MCP client — that is a real, separate product decision. See connectd/README.md for the full trace and the open question left for Will.
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neuron
The canonical CGI substrate: the soul (the running agent), the engram (its memory
graph), and the MCP proxy/wrapper that expose it. See AGENTS.md for detail, including
the audit-verified local build/regenerate recipe and known local-build gotchas.
Quick local build
# 1. dist/soul.c must match current .el sources — this refuses otherwise:
bash tools/build-soul-from-dist.sh dist/neuron
# 2. If it refuses (stale amalgam), regenerate first — see AGENTS.md's
# "Build / regenerate dist/soul.c" section for the full, gotcha-laden recipe.
For a full local dev stack (soul + engram + mcp-wrapper + mcp-proxy, wired into Claude
Code) see neuron-dev-setup/README.md instead — this repo alone only builds the soul.
Code vs. Artifact
- Authored source:
*.el+*.elhat the repo root pluscli/,council/,connectd/,mcp-proxy/,mcp-wrapper/— edit here. - Artifacts (do not hand-edit):
dist/soul.c(generated single-TU amalgam — regenerate via the recipe inAGENTS.md, thentools/soulc-stamp.sh --write) and thedist/neuronbinary it compiles to. - Release: git tag
neuron-vX.Y.Zon this repo. Noreleases/folders.
See org policy: docs/CODE-VS-ARTIFACT.md.