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neuron/tools/retrieval-eval/results-semseed.json
T
Tim Lingo 6f3a048f36 feat(engram): semantically seed the graph leg (Will's HippoRAG pass, SEED_K=8) 
engram_assoc_leg previously took its seeds only from the top-3 LEXICAL hits.
For a paraphrase query the lexical hits are noise by construction, so the walk
never reached the neighbourhood that holds the answer. This adds the seeding
pass Will documents at el_runtime.c l.6082 — "Semantic seeding (HippoRAG
pattern, use similarity twice): the query is embedded, the top-K nodes by
cosine join the seed set" — using his own ENGRAM_EMBED_SEED_K (8).

Similarity is now used twice, coherently: cosine picks where to STAND in the
graph, the structural-relation walk decides what is REACHABLE, and cosine
orders what was reached (iteration 2's finding, unchanged).

The seed list is deliberately NOT floored at ENGRAM_EMBED_SEED_MIN. Measured
over all 38 gold queries: true paraphrase targets score cosine 0.46-0.66 and
the three nonsense controls' own nearest neighbours score 0.55/0.60/0.62 —
the distributions OVERLAP, so no absolute cosine floor separates signal from
gibberish. The gate that works is reachability: gibberish's nearest neighbours
carry no structural edge, so its graph leg is empty and the controls hold.

The raw top-K is selected inside the existing scoring pass, so the cosine is
computed exactly once per node: no extra corpus pass, no extra embed
round-trip, latency flat (p50 1220 -> 1227 ms, 1.01x).

Measured vs the certified baseline feat/hybrid-semantic-recall, embedded
corpus, 2 runs each, zero run-to-run drift on both sides:
  hit@5 51.4% -> 68.6%   MRR@10 0.387 -> 0.461
  paraphrase 38.5% -> 61.5%   associative 0% -> 66.7%
  exact_rare 100% held, nonsense 2/3 held, superseded 2/3 held
  phrase 85.7% -> 71.4% (q11, the known rank-5 rotation tax)
  net +6 queries (7 fixed / 1 broken), McNemar p=0.0703
2026-08-07 15:35:08 -05:00

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{
"label": "semseed",
"soul_binary": "/private/tmp/claude-501/-Users-timlingo/82369039-a20e-4b5a-8a5e-28234a57b996/scratchpad/soul-semseed",
"soul_md5": "ab0c82781215f43d4907bd6f39d3615b",
"corpus": "/Users/timlingo/neuron-eval-corpora/snapshot-pre-repair-20260806-embedded.json",
"corpus_nodes": 78768,
"corpus_edges": 14214,
"gold_set": "/Users/timlingo/Development/neuron-technologies/_wt-semseed/tools/retrieval-eval/gold_set.json",
"limit": 10,
"port": 7893,
"wall_clock_s": 52.7,
"child_pid": 88601,
"child_confirmed_dead": true,
"aggregate": {
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{
"id": "q10",
"category": "phrase",
"query": "Directed Harmonic",
"returned": [
"ԍ????X????",
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"?ǚ?7??????",
"project-harmonic-framework_com",
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{
"id": "q13",
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"query": "zero-knowledge encrypted backup",
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{
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"query": "learning is the wealth creditors cannot seize",
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{
"id": "q20",
"category": "paraphrase",
"query": "reliability proven by track record not assertion",
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"id": "q21",
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{
"id": "q32",
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{
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{
"id": "q35",
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{
"id": "q36",
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"id": "q37",
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}
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