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Author SHA1 Message Date
will.anderson 4b24368be2 Add neuron-dev-setup: one-command CORE dev stack onboarding installer
Neuron Soul CI / build (pull_request) Failing after 14m49s
Neuron Soul CI / deploy (pull_request) Has been skipped
Scaffolds a reproducible, idempotent installer that stands up the four native
launchd core services (soul :7770, engram :8742, mcp-wrapper :17779,
mcp-proxy :7779), seeds a fresh engram with the genesis identity via forge, and
installs the Claude Code config (neuron agent + core hooks + local MCP). Fully
templated to the invoking user's $HOME; Anthropic key prompted and stored in
Keychain; no secrets committed. Personal automations and synapse-dependent hooks
excluded from core.
2026-07-18 13:42:50 -05:00
will.anderson c199a13a7f Merge pull request 'Land immutability arc + CI soul-contract gate on main' (#83) from feat/immutable-engram-deletes into main
Neuron Soul CI / build (push) Has been cancelled
Neuron Soul CI / deploy (push) Has been cancelled
2026-07-18 18:33:03 +00:00
will.anderson 290a637883 ci: gate the Linux soul on the contract before publishing
Neuron Soul CI / build (pull_request) Failing after 12m4s
Neuron Soul CI / deploy (pull_request) Has been skipped
Wire the soul contract gate into ci.yaml as a hard block between the cc
build and the Publish-to-Artifact-Registry step. A non-zero gate fails the
build, so a stale (route-404ing) or memory-destroying (hard-deleting) soul
can never publish neuron-soul to foundation-prod or blue-green deploy to
GKE — the same class-fix now guarding the desktop builds, extended to prod.

Vendors scripts/verify-soul-contract.sh (copied from neuron-ui; the route
contract is baked in, so it's portable POSIX bash/curl with no neuron-ui
source dependency). It boots dist/neuron on a throwaway port with a
throwaway HOME/engram/cgi — never touching ~/.neuron or any live service —
and checks PRESENCE (every app route answered) + IMMUTABILITY (no engram
write route hard-deletes; deletes/forgets tombstone). Adds curl to the
build deps for the probe.
2026-07-18 13:31:33 -05:00
will.anderson 40d800195a Tombstone the remaining forget paths (close the immutability arc)
Phase 1 tombstoned memory/delete + node/delete, but the generic forget
path was still destructive. This routes every forget through the same
tombstone semantics so nothing in the daemon can hard-delete an engram
node anymore.

Canonical helper: mem_tombstone (memory.el, imported first so every module
can call it) — keep the node + its edges, record a Tombstone marker, never
engram_forget. neuron-api's tombstone_node now delegates to it (single
source of truth).

Per-path before -> after:
- memory.el `mem_forget`      hard delete (engram_forget) -> tombstone. This
  alone fixes both callers: the /api/neuron/memory/forget route
  (handle_api_forget) and the cultivate op=="forget".
- awareness.el autonomous `forget` action  engram_forget -> mem_tombstone.
  The soul can no longer autonomously hard-delete a memory.
- mcp-wrapper tool_forget  was a FAKE no-op that returned {"ok","deleted"}
  without deleting OR tombstoning -> now routes to the soul's tombstoning
  /api/neuron/memory/delete; tool description fixed to say it
  supersedes/tombstones (recoverable), not "Remove a node".

Left intentionally as hard deletes (internal GC / lifecycle, not user
memory, all call engram_forget directly): session-summary replace
(chat.el), mem_consolidate dedup (memory.el), session-start telemetry
pruning (soul.el), session lifecycle (sessions.el).

Regenerated both ship paths under a 3GB physical-RSS watchdog (peak ~32MB):
dist/soul.c (single-TU amalgamation, macOS/Linux) and the per-module
dist/{memory,awareness,neuron-api}.c (Windows/Linux build). Verified: no
forget handler calls engram_forget; a forget leaves the node present +
tombstone marker. Gate (neuron-ui verify-soul-contract.sh, new memory-forget
row): PRESENCE + IMMUTABILITY PASS.
2026-07-18 13:22:43 -05:00
will.anderson f3034d23f7 Regenerate per-module dist/neuron-api.c for the immutability fix
soul.c (the macOS single-TU amalgamation) already carries the
tombstone/supersede change, but the Windows/Linux build path compiles
the per-module dist/*.c instead (build-soul-windows.sh excludes soul.c).
That path was still pulling the stale, destructive dist/neuron-api.c —
so without this the cross-compiled neuron.exe would keep hard-deleting
engram nodes even though the source is fixed.

Regenerated with `elc --emit-header neuron-api.el`: no engram_forget in
memory_delete/node_delete (tombstone), supersedes edge in node_update.
Portable C — identical for macOS/Windows/Linux; only the runtime it links
against differs.
2026-07-17 16:57:55 -05:00
will.anderson d337fcb265 Make engram deletes/updates immutable (tombstone + supersede)
The soul was hard-deleting engram nodes: memory/delete and node/delete
called engram_forget (frees the node and drops its incident edges), and
node/update created a replacement then forgot the original with no link
back. That violates the day-one rule that engram nodes are immutable —
memory could be silently, irrecoverably destroyed via the API.

Convert the three destructive handlers to Will's immutability semantics,
mirroring the pattern memory/update and knowledge evolve/promote already
use:

- node/update  -> create the new node, wire a "supersedes" edge new->old,
  KEEP the original. No engram_forget. (Was: create + forget old, no edge.)
- memory/delete and node/delete -> TOMBSTONE: keep the node AND its edges,
  create a Tombstone marker node (content = target id, label
  "tombstone:<id>") wired with a "tombstones" edge. Never engram_forget.
  Default bounded list reads (handle_api_list_typed / the memory list) hide
  tombstoned nodes and the markers; ?include_deleted=1 returns them, and
  internal cognition + /api/graph/nodes still traverse them. memory/update
  was already correct and is unchanged.

Full-graph hiding on /api/graph/nodes is deliberately NOT done at the el
layer: json_array_get is O(index), so filtering that endpoint (called with
limit up to 999999) would be O(n^2). That hide needs a runtime scan filter
and is a separate follow-up; nodes there remain traversable, tagged
status:deleted via the marker edge.

Regenerated dist/soul.c from these sources (flat single-TU amalgamation,
compiled under a 3GB physical-RSS watchdog, peak ~32MB). Verified with
scripts/verify-soul-contract.sh in neuron-ui: PRESENCE passes (all 27
routes) and IMMUTABILITY passes (all four mutation routes KEPT; deletes
produce a real tombstone marker and hide from the default list).
2026-07-17 16:42:30 -05:00
25 changed files with 1940 additions and 269 deletions
+12 -1
View File
@@ -34,7 +34,7 @@ jobs:
- name: Install build dependencies
run: |
apt-get update -qq
apt-get install -y gcc libcurl4-openssl-dev apt-transport-https ca-certificates
apt-get install -y gcc curl libcurl4-openssl-dev apt-transport-https ca-certificates
echo "deb [trusted=yes] https://packages.cloud.google.com/apt cloud-sdk main" \
> /etc/apt/sources.list.d/google-cloud-sdk.list
apt-get update -qq && apt-get install -y google-cloud-cli
@@ -107,6 +107,17 @@ jobs:
strip -s dist/neuron
ls -lh dist/neuron
- name: Soul contract gate (HARD BLOCK — no destructive/stale soul publishes)
run: |
# Boots dist/neuron on a throwaway port with a throwaway HOME/engram/cgi
# (never touches ~/.neuron or any live service) and fails the build if any
# app-contract route is unanswered (PRESENCE) or any engram write route
# hard-deletes instead of tombstoning/superseding (IMMUTABILITY). Non-zero
# here blocks Publish -> Artifact Registry -> GKE deploy, so a stale or
# memory-destroying soul can never reach prod.
chmod +x dist/neuron scripts/verify-soul-contract.sh
bash scripts/verify-soul-contract.sh dist/neuron 7796
- name: Smoke test
run: |
file dist/neuron
+4 -2
View File
@@ -446,8 +446,10 @@ fn respond(action_json: String) -> String {
}
if str_eq(kind, "forget") {
engram_forget(payload)
return "{\"outcome\":\"forgotten\",\"id\":\"" + payload + "\"}"
// The soul must NOT be able to autonomously hard-delete a memory.
// Tombstone instead (keep node + edges, recoverable).
let _marker: String = mem_tombstone(payload)
return "{\"outcome\":\"tombstoned\",\"id\":\"" + payload + "\"}"
}
return "{\"outcome\":\"noop\"}"
Generated Vendored
+3 -2
View File
@@ -10,6 +10,7 @@ el_val_t mem_remember(el_val_t content, el_val_t tags);
el_val_t mem_recall(el_val_t query, el_val_t depth);
el_val_t mem_search(el_val_t query, el_val_t limit);
el_val_t mem_strengthen(el_val_t node_id);
el_val_t mem_tombstone(el_val_t node_id);
el_val_t mem_forget(el_val_t node_id);
el_val_t mem_consolidate(void);
el_val_t mem_save(el_val_t path);
@@ -362,8 +363,8 @@ el_val_t respond(el_val_t action_json) {
return el_str_concat(el_str_concat(EL_STR("{\"outcome\":\"strengthened\",\"id\":\""), payload), EL_STR("\"}"));
}
if (str_eq(kind, EL_STR("forget"))) {
engram_forget(payload);
return el_str_concat(el_str_concat(EL_STR("{\"outcome\":\"forgotten\",\"id\":\""), payload), EL_STR("\"}"));
el_val_t _marker = mem_tombstone(payload);
return el_str_concat(el_str_concat(EL_STR("{\"outcome\":\"tombstoned\",\"id\":\""), payload), EL_STR("\"}"));
}
return EL_STR("{\"outcome\":\"noop\"}");
return 0;
Generated Vendored
+12 -1
View File
@@ -10,6 +10,7 @@ el_val_t mem_remember(el_val_t content, el_val_t tags);
el_val_t mem_recall(el_val_t query, el_val_t depth);
el_val_t mem_search(el_val_t query, el_val_t limit);
el_val_t mem_strengthen(el_val_t node_id);
el_val_t mem_tombstone(el_val_t node_id);
el_val_t mem_forget(el_val_t node_id);
el_val_t mem_consolidate(void);
el_val_t mem_save(el_val_t path);
@@ -69,8 +70,18 @@ el_val_t mem_strengthen(el_val_t node_id) {
return 0;
}
el_val_t mem_tombstone(el_val_t node_id) {
el_val_t tags = EL_STR("[\"Tombstone\",\"status:deleted\"]");
el_val_t marker = engram_node_full(node_id, EL_STR("Tombstone"), el_str_concat(EL_STR("tombstone:"), node_id), el_from_float(0.01), el_from_float(0.01), el_from_float(1.0), EL_STR("Episodic"), tags);
if (!str_eq(marker, EL_STR(""))) {
engram_connect(marker, node_id, el_from_float(1.0), EL_STR("tombstones"));
}
return marker;
return 0;
}
el_val_t mem_forget(el_val_t node_id) {
engram_forget(node_id);
el_val_t _marker = mem_tombstone(node_id);
return 0;
}
Generated Vendored
+127 -54
View File
@@ -10,6 +10,7 @@ el_val_t mem_remember(el_val_t content, el_val_t tags);
el_val_t mem_recall(el_val_t query, el_val_t depth);
el_val_t mem_search(el_val_t query, el_val_t limit);
el_val_t mem_strengthen(el_val_t node_id);
el_val_t mem_tombstone(el_val_t node_id);
el_val_t mem_forget(el_val_t node_id);
el_val_t mem_consolidate(void);
el_val_t mem_save(el_val_t path);
@@ -28,6 +29,9 @@ el_val_t api_nonempty(el_val_t s);
el_val_t api_or_empty(el_val_t s);
el_val_t api_persisted(el_val_t id);
el_val_t api_not_persisted(el_val_t id);
el_val_t tombstone_node(el_val_t id);
el_val_t tombstoned_id_set(void);
el_val_t memory_hide_tombstoned(el_val_t raw, el_val_t path);
el_val_t handle_api_begin_session(el_val_t body);
el_val_t handle_api_compile_ctx(el_val_t body);
el_val_t handle_api_remember(el_val_t body);
@@ -189,6 +193,61 @@ el_val_t api_not_persisted(el_val_t id) {
return 0;
}
el_val_t tombstone_node(el_val_t id) {
return mem_tombstone(id);
return 0;
}
el_val_t tombstoned_id_set(void) {
el_val_t markers = engram_scan_nodes_by_type_json(EL_STR("Tombstone"), 5000, 0);
if (str_eq(markers, EL_STR("")) || str_eq(markers, EL_STR("[]"))) {
return EL_STR("");
}
el_val_t n = json_array_len(markers);
el_val_t acc = EL_STR("|");
el_val_t i = 0;
while (i < n) {
el_val_t m = json_array_get(markers, i);
el_val_t tid = json_get(m, EL_STR("content"));
acc = ({ el_val_t _if_result_1 = 0; if (str_eq(tid, EL_STR(""))) { _if_result_1 = (acc); } else { _if_result_1 = (el_str_concat(el_str_concat(acc, tid), EL_STR("|"))); } _if_result_1; });
i = (i + 1);
}
return acc;
return 0;
}
el_val_t memory_hide_tombstoned(el_val_t raw, el_val_t path) {
if (str_contains(path, EL_STR("include_deleted"))) {
return raw;
}
if (str_eq(raw, EL_STR("")) || str_eq(raw, EL_STR("[]"))) {
return raw;
}
el_val_t dead = tombstoned_id_set();
if (str_eq(dead, EL_STR(""))) {
return raw;
}
el_val_t n = json_array_len(raw);
if (n > 1000) {
return raw;
}
el_val_t out = EL_STR("[");
el_val_t first = 1;
el_val_t i = 0;
while (i < n) {
el_val_t node = json_array_get(raw, i);
el_val_t nid = json_get(node, EL_STR("id"));
el_val_t ntype = json_get(node, EL_STR("node_type"));
el_val_t is_dead = (!str_eq(nid, EL_STR("")) && str_contains(dead, el_str_concat(el_str_concat(EL_STR("|"), nid), EL_STR("|"))));
el_val_t keep = (!str_eq(ntype, EL_STR("Tombstone")) && !is_dead);
out = ({ el_val_t _if_result_2 = 0; if (keep) { _if_result_2 = (({ el_val_t _if_result_3 = 0; if (first) { _if_result_3 = (el_str_concat(out, node)); } else { _if_result_3 = (el_str_concat(el_str_concat(out, EL_STR(",")), node)); } _if_result_3; })); } else { _if_result_2 = (out); } _if_result_2; });
first = ({ el_val_t _if_result_4 = 0; if (keep) { _if_result_4 = (0); } else { _if_result_4 = (first); } _if_result_4; });
i = (i + 1);
}
return el_str_concat(out, EL_STR("]"));
return 0;
}
el_val_t handle_api_begin_session(el_val_t body) {
el_val_t stats = engram_stats_json();
el_val_t activated = engram_activate_json(EL_STR("session start recent memory important"), 2);
@@ -215,10 +274,10 @@ el_val_t handle_api_remember(el_val_t body) {
el_val_t importance = json_get(body, EL_STR("importance"));
el_val_t tags_raw = json_get(body, EL_STR("tags"));
el_val_t project = json_get(body, EL_STR("project"));
el_val_t sal_str = ({ el_val_t _if_result_1 = 0; if (str_eq(importance, EL_STR("critical"))) { _if_result_1 = (EL_STR("0.95")); } else { _if_result_1 = (({ el_val_t _if_result_2 = 0; if (str_eq(importance, EL_STR("high"))) { _if_result_2 = (EL_STR("0.75")); } else { _if_result_2 = (({ el_val_t _if_result_3 = 0; if (str_eq(importance, EL_STR("low"))) { _if_result_3 = (EL_STR("0.25")); } else { _if_result_3 = (EL_STR("0.50")); } _if_result_3; })); } _if_result_2; })); } _if_result_1; });
el_val_t sal = ({ el_val_t _if_result_4 = 0; if (str_eq(sal_str, EL_STR("0.95"))) { _if_result_4 = (el_from_float(0.95)); } else { _if_result_4 = (({ el_val_t _if_result_5 = 0; if (str_eq(sal_str, EL_STR("0.75"))) { _if_result_5 = (el_from_float(0.75)); } else { _if_result_5 = (({ el_val_t _if_result_6 = 0; if (str_eq(sal_str, EL_STR("0.25"))) { _if_result_6 = (el_from_float(0.25)); } else { _if_result_6 = (el_from_float(0.5)); } _if_result_6; })); } _if_result_5; })); } _if_result_4; });
el_val_t base_tags = ({ el_val_t _if_result_7 = 0; if (str_eq(tags_raw, EL_STR(""))) { _if_result_7 = (EL_STR("[\"Memory\"]")); } else { _if_result_7 = (tags_raw); } _if_result_7; });
el_val_t final_tags = ({ el_val_t _if_result_8 = 0; if (str_eq(project, EL_STR(""))) { _if_result_8 = (base_tags); } else { el_val_t inner = str_slice(base_tags, 1, (str_len(base_tags) - 1)); _if_result_8 = (el_str_concat(el_str_concat(el_str_concat(el_str_concat(EL_STR("["), inner), EL_STR(",\"project:")), project), EL_STR("\"]"))); } _if_result_8; });
el_val_t sal_str = ({ el_val_t _if_result_5 = 0; if (str_eq(importance, EL_STR("critical"))) { _if_result_5 = (EL_STR("0.95")); } else { _if_result_5 = (({ el_val_t _if_result_6 = 0; if (str_eq(importance, EL_STR("high"))) { _if_result_6 = (EL_STR("0.75")); } else { _if_result_6 = (({ el_val_t _if_result_7 = 0; if (str_eq(importance, EL_STR("low"))) { _if_result_7 = (EL_STR("0.25")); } else { _if_result_7 = (EL_STR("0.50")); } _if_result_7; })); } _if_result_6; })); } _if_result_5; });
el_val_t sal = ({ el_val_t _if_result_8 = 0; if (str_eq(sal_str, EL_STR("0.95"))) { _if_result_8 = (el_from_float(0.95)); } else { _if_result_8 = (({ el_val_t _if_result_9 = 0; if (str_eq(sal_str, EL_STR("0.75"))) { _if_result_9 = (el_from_float(0.75)); } else { _if_result_9 = (({ el_val_t _if_result_10 = 0; if (str_eq(sal_str, EL_STR("0.25"))) { _if_result_10 = (el_from_float(0.25)); } else { _if_result_10 = (el_from_float(0.5)); } _if_result_10; })); } _if_result_9; })); } _if_result_8; });
el_val_t base_tags = ({ el_val_t _if_result_11 = 0; if (str_eq(tags_raw, EL_STR(""))) { _if_result_11 = (EL_STR("[\"Memory\"]")); } else { _if_result_11 = (tags_raw); } _if_result_11; });
el_val_t final_tags = ({ el_val_t _if_result_12 = 0; if (str_eq(project, EL_STR(""))) { _if_result_12 = (base_tags); } else { el_val_t inner = str_slice(base_tags, 1, (str_len(base_tags) - 1)); _if_result_12 = (el_str_concat(el_str_concat(el_str_concat(el_str_concat(EL_STR("["), inner), EL_STR(",\"project:")), project), EL_STR("\"]"))); } _if_result_12; });
el_val_t id = engram_node_full(content, EL_STR("Memory"), EL_STR("memory:remembered"), el_from_float(sal), el_from_float(sal), el_from_float(0.9), EL_STR("Episodic"), final_tags);
if (!api_persisted(id)) {
return api_not_persisted(id);
@@ -233,15 +292,15 @@ el_val_t handle_api_node_create(el_val_t body) {
return api_err(EL_STR("content is required"));
}
el_val_t nt_raw = json_get(body, EL_STR("node_type"));
el_val_t node_type = ({ el_val_t _if_result_9 = 0; if (str_eq(nt_raw, EL_STR(""))) { _if_result_9 = (EL_STR("Memory")); } else { _if_result_9 = (nt_raw); } _if_result_9; });
el_val_t node_type = ({ el_val_t _if_result_13 = 0; if (str_eq(nt_raw, EL_STR(""))) { _if_result_13 = (EL_STR("Memory")); } else { _if_result_13 = (nt_raw); } _if_result_13; });
el_val_t label_raw = json_get(body, EL_STR("label"));
el_val_t label = ({ el_val_t _if_result_10 = 0; if (str_eq(label_raw, EL_STR(""))) { _if_result_10 = (EL_STR("node:created")); } else { _if_result_10 = (label_raw); } _if_result_10; });
el_val_t label = ({ el_val_t _if_result_14 = 0; if (str_eq(label_raw, EL_STR(""))) { _if_result_14 = (EL_STR("node:created")); } else { _if_result_14 = (label_raw); } _if_result_14; });
el_val_t tier_raw = json_get(body, EL_STR("tier"));
el_val_t tier = ({ el_val_t _if_result_11 = 0; if (str_eq(tier_raw, EL_STR(""))) { _if_result_11 = (EL_STR("Episodic")); } else { _if_result_11 = (tier_raw); } _if_result_11; });
el_val_t tier = ({ el_val_t _if_result_15 = 0; if (str_eq(tier_raw, EL_STR(""))) { _if_result_15 = (EL_STR("Episodic")); } else { _if_result_15 = (tier_raw); } _if_result_15; });
el_val_t tags_raw = json_get(body, EL_STR("tags"));
el_val_t tags = ({ el_val_t _if_result_12 = 0; if (str_eq(tags_raw, EL_STR(""))) { _if_result_12 = (el_str_concat(el_str_concat(EL_STR("[\""), node_type), EL_STR("\"]"))); } else { _if_result_12 = (tags_raw); } _if_result_12; });
el_val_t tags = ({ el_val_t _if_result_16 = 0; if (str_eq(tags_raw, EL_STR(""))) { _if_result_16 = (el_str_concat(el_str_concat(EL_STR("[\""), node_type), EL_STR("\"]"))); } else { _if_result_16 = (tags_raw); } _if_result_16; });
el_val_t importance = json_get(body, EL_STR("importance"));
el_val_t sal = ({ el_val_t _if_result_13 = 0; if (str_eq(importance, EL_STR("critical"))) { _if_result_13 = (el_from_float(0.95)); } else { _if_result_13 = (({ el_val_t _if_result_14 = 0; if (str_eq(importance, EL_STR("high"))) { _if_result_14 = (el_from_float(0.75)); } else { _if_result_14 = (({ el_val_t _if_result_15 = 0; if (str_eq(importance, EL_STR("low"))) { _if_result_15 = (el_from_float(0.25)); } else { _if_result_15 = (el_from_float(0.5)); } _if_result_15; })); } _if_result_14; })); } _if_result_13; });
el_val_t sal = ({ el_val_t _if_result_17 = 0; if (str_eq(importance, EL_STR("critical"))) { _if_result_17 = (el_from_float(0.95)); } else { _if_result_17 = (({ el_val_t _if_result_18 = 0; if (str_eq(importance, EL_STR("high"))) { _if_result_18 = (el_from_float(0.75)); } else { _if_result_18 = (({ el_val_t _if_result_19 = 0; if (str_eq(importance, EL_STR("low"))) { _if_result_19 = (el_from_float(0.25)); } else { _if_result_19 = (el_from_float(0.5)); } _if_result_19; })); } _if_result_18; })); } _if_result_17; });
el_val_t id = engram_node_full(content, node_type, label, el_from_float(sal), el_from_float(sal), el_from_float(0.9), tier, tags);
if (!api_persisted(id)) {
return api_not_persisted(id);
@@ -255,8 +314,18 @@ el_val_t handle_api_node_delete(el_val_t body) {
if (str_eq(id, EL_STR(""))) {
return api_err(EL_STR("id is required"));
}
engram_forget(id);
return el_str_concat(el_str_concat(EL_STR("{\"ok\":true,\"id\":\""), id), EL_STR("\"}"));
if (is_protected_node(id)) {
return api_err_protected(id);
}
el_val_t existing = engram_get_node_json(id);
if (str_eq(existing, EL_STR("{}"))) {
return api_err(el_str_concat(EL_STR("node not found: "), id));
}
el_val_t marker = tombstone_node(id);
if (str_eq(marker, EL_STR(""))) {
return api_err(el_str_concat(EL_STR("tombstone failed: "), id));
}
return el_str_concat(el_str_concat(EL_STR("{\"ok\":true,\"id\":\""), id), EL_STR("\",\"tombstoned\":true}"));
return 0;
}
@@ -270,37 +339,37 @@ el_val_t handle_api_node_update(el_val_t body) {
}
el_val_t old = engram_get_node_json(id);
el_val_t body_content = json_get(body, EL_STR("content"));
el_val_t content = ({ el_val_t _if_result_16 = 0; if (str_eq(body_content, EL_STR(""))) { _if_result_16 = (json_get(old, EL_STR("content"))); } else { _if_result_16 = (body_content); } _if_result_16; });
el_val_t content = ({ el_val_t _if_result_20 = 0; if (str_eq(body_content, EL_STR(""))) { _if_result_20 = (json_get(old, EL_STR("content"))); } else { _if_result_20 = (body_content); } _if_result_20; });
el_val_t body_nt = json_get(body, EL_STR("node_type"));
el_val_t old_nt = json_get(old, EL_STR("node_type"));
el_val_t node_type = ({ el_val_t _if_result_17 = 0; if (!str_eq(body_nt, EL_STR(""))) { _if_result_17 = (body_nt); } else { _if_result_17 = (({ el_val_t _if_result_18 = 0; if (!str_eq(old_nt, EL_STR(""))) { _if_result_18 = (old_nt); } else { _if_result_18 = (EL_STR("Memory")); } _if_result_18; })); } _if_result_17; });
el_val_t node_type = ({ el_val_t _if_result_21 = 0; if (!str_eq(body_nt, EL_STR(""))) { _if_result_21 = (body_nt); } else { _if_result_21 = (({ el_val_t _if_result_22 = 0; if (!str_eq(old_nt, EL_STR(""))) { _if_result_22 = (old_nt); } else { _if_result_22 = (EL_STR("Memory")); } _if_result_22; })); } _if_result_21; });
el_val_t body_label = json_get(body, EL_STR("label"));
el_val_t old_label = json_get(old, EL_STR("label"));
el_val_t label = ({ el_val_t _if_result_19 = 0; if (!str_eq(body_label, EL_STR(""))) { _if_result_19 = (body_label); } else { _if_result_19 = (({ el_val_t _if_result_20 = 0; if (!str_eq(old_label, EL_STR(""))) { _if_result_20 = (old_label); } else { _if_result_20 = (EL_STR("node:updated")); } _if_result_20; })); } _if_result_19; });
el_val_t label = ({ el_val_t _if_result_23 = 0; if (!str_eq(body_label, EL_STR(""))) { _if_result_23 = (body_label); } else { _if_result_23 = (({ el_val_t _if_result_24 = 0; if (!str_eq(old_label, EL_STR(""))) { _if_result_24 = (old_label); } else { _if_result_24 = (EL_STR("node:updated")); } _if_result_24; })); } _if_result_23; });
el_val_t body_tier = json_get(body, EL_STR("tier"));
el_val_t old_tier = json_get(old, EL_STR("tier"));
el_val_t tier = ({ el_val_t _if_result_21 = 0; if (!str_eq(body_tier, EL_STR(""))) { _if_result_21 = (body_tier); } else { _if_result_21 = (({ el_val_t _if_result_22 = 0; if (!str_eq(old_tier, EL_STR(""))) { _if_result_22 = (old_tier); } else { _if_result_22 = (EL_STR("Episodic")); } _if_result_22; })); } _if_result_21; });
el_val_t tier = ({ el_val_t _if_result_25 = 0; if (!str_eq(body_tier, EL_STR(""))) { _if_result_25 = (body_tier); } else { _if_result_25 = (({ el_val_t _if_result_26 = 0; if (!str_eq(old_tier, EL_STR(""))) { _if_result_26 = (old_tier); } else { _if_result_26 = (EL_STR("Episodic")); } _if_result_26; })); } _if_result_25; });
el_val_t body_tags = json_get(body, EL_STR("tags"));
el_val_t tags = ({ el_val_t _if_result_23 = 0; if (str_eq(body_tags, EL_STR(""))) { _if_result_23 = (el_str_concat(el_str_concat(EL_STR("[\""), node_type), EL_STR("\"]"))); } else { _if_result_23 = (body_tags); } _if_result_23; });
el_val_t tags = ({ el_val_t _if_result_27 = 0; if (str_eq(body_tags, EL_STR(""))) { _if_result_27 = (el_str_concat(el_str_concat(EL_STR("[\""), node_type), EL_STR("\"]"))); } else { _if_result_27 = (body_tags); } _if_result_27; });
el_val_t new_id = engram_node_full(content, node_type, label, el_from_float(0.5), el_from_float(0.5), el_from_float(0.8), tier, tags);
if (!api_persisted(new_id)) {
return api_not_persisted(new_id);
}
engram_forget(id);
return el_str_concat(el_str_concat(el_str_concat(el_str_concat(EL_STR("{\"id\":\""), new_id), EL_STR("\",\"replaced\":\"")), id), EL_STR("\",\"ok\":true}"));
engram_connect(new_id, id, el_from_float(0.9), EL_STR("supersedes"));
return el_str_concat(el_str_concat(el_str_concat(el_str_concat(EL_STR("{\"id\":\""), new_id), EL_STR("\",\"supersedes\":\"")), id), EL_STR("\",\"ok\":true}"));
return 0;
}
el_val_t handle_api_recall(el_val_t method, el_val_t path, el_val_t body) {
el_val_t url_q = ({ el_val_t _if_result_24 = 0; if (str_eq(api_query_param(path, EL_STR("query")), EL_STR(""))) { _if_result_24 = (api_query_param(path, EL_STR("q"))); } else { _if_result_24 = (api_query_param(path, EL_STR("query"))); } _if_result_24; });
el_val_t url_q = ({ el_val_t _if_result_28 = 0; if (str_eq(api_query_param(path, EL_STR("query")), EL_STR(""))) { _if_result_28 = (api_query_param(path, EL_STR("q"))); } else { _if_result_28 = (api_query_param(path, EL_STR("query"))); } _if_result_28; });
el_val_t body_query = json_get(body, EL_STR("query"));
el_val_t body_q = json_get(body, EL_STR("q"));
el_val_t q = ({ el_val_t _if_result_25 = 0; if (!str_eq(url_q, EL_STR(""))) { _if_result_25 = (url_q); } else { _if_result_25 = (({ el_val_t _if_result_26 = 0; if (!str_eq(body_query, EL_STR(""))) { _if_result_26 = (body_query); } else { _if_result_26 = (body_q); } _if_result_26; })); } _if_result_25; });
el_val_t q = ({ el_val_t _if_result_29 = 0; if (!str_eq(url_q, EL_STR(""))) { _if_result_29 = (url_q); } else { _if_result_29 = (({ el_val_t _if_result_30 = 0; if (!str_eq(body_query, EL_STR(""))) { _if_result_30 = (body_query); } else { _if_result_30 = (body_q); } _if_result_30; })); } _if_result_29; });
el_val_t chain = json_get(body, EL_STR("chain_name"));
el_val_t limit = api_query_int(path, EL_STR("limit"), 0);
limit = ({ el_val_t _if_result_27 = 0; if ((limit == 0)) { _if_result_27 = (json_get_int(body, EL_STR("limit"))); } else { _if_result_27 = (limit); } _if_result_27; });
limit = ({ el_val_t _if_result_28 = 0; if ((limit == 0)) { _if_result_28 = (10); } else { _if_result_28 = (limit); } _if_result_28; });
el_val_t eff_q = ({ el_val_t _if_result_29 = 0; if (str_eq(q, EL_STR(""))) { _if_result_29 = (chain); } else { _if_result_29 = (q); } _if_result_29; });
limit = ({ el_val_t _if_result_31 = 0; if ((limit == 0)) { _if_result_31 = (json_get_int(body, EL_STR("limit"))); } else { _if_result_31 = (limit); } _if_result_31; });
limit = ({ el_val_t _if_result_32 = 0; if ((limit == 0)) { _if_result_32 = (10); } else { _if_result_32 = (limit); } _if_result_32; });
el_val_t eff_q = ({ el_val_t _if_result_33 = 0; if (str_eq(q, EL_STR(""))) { _if_result_33 = (chain); } else { _if_result_33 = (q); } _if_result_33; });
if (str_eq(eff_q, EL_STR(""))) {
return api_or_empty(engram_scan_nodes_json(limit, 0));
}
@@ -313,10 +382,10 @@ el_val_t handle_api_search_knowledge(el_val_t method, el_val_t path, el_val_t bo
el_val_t url_q = api_query_param(path, EL_STR("q"));
el_val_t body_query = json_get(body, EL_STR("query"));
el_val_t body_q = json_get(body, EL_STR("q"));
el_val_t q = ({ el_val_t _if_result_30 = 0; if (!str_eq(url_q, EL_STR(""))) { _if_result_30 = (url_q); } else { _if_result_30 = (({ el_val_t _if_result_31 = 0; if (!str_eq(body_query, EL_STR(""))) { _if_result_31 = (body_query); } else { _if_result_31 = (body_q); } _if_result_31; })); } _if_result_30; });
el_val_t q = ({ el_val_t _if_result_34 = 0; if (!str_eq(url_q, EL_STR(""))) { _if_result_34 = (url_q); } else { _if_result_34 = (({ el_val_t _if_result_35 = 0; if (!str_eq(body_query, EL_STR(""))) { _if_result_35 = (body_query); } else { _if_result_35 = (body_q); } _if_result_35; })); } _if_result_34; });
el_val_t limit = api_query_int(path, EL_STR("limit"), 0);
limit = ({ el_val_t _if_result_32 = 0; if ((limit == 0)) { _if_result_32 = (json_get_int(body, EL_STR("limit"))); } else { _if_result_32 = (limit); } _if_result_32; });
limit = ({ el_val_t _if_result_33 = 0; if ((limit == 0)) { _if_result_33 = (10); } else { _if_result_33 = (limit); } _if_result_33; });
limit = ({ el_val_t _if_result_36 = 0; if ((limit == 0)) { _if_result_36 = (json_get_int(body, EL_STR("limit"))); } else { _if_result_36 = (limit); } _if_result_36; });
limit = ({ el_val_t _if_result_37 = 0; if ((limit == 0)) { _if_result_37 = (10); } else { _if_result_37 = (limit); } _if_result_37; });
if (str_eq(q, EL_STR(""))) {
return api_err(EL_STR("query is required"));
}
@@ -344,7 +413,7 @@ el_val_t handle_api_capture_knowledge(el_val_t body) {
if (str_eq(content, EL_STR(""))) {
return api_err(EL_STR("content is required"));
}
el_val_t full = ({ el_val_t _if_result_34 = 0; if (str_eq(title, EL_STR(""))) { _if_result_34 = (content); } else { _if_result_34 = (el_str_concat(el_str_concat(title, EL_STR(": ")), content)); } _if_result_34; });
el_val_t full = ({ el_val_t _if_result_38 = 0; if (str_eq(title, EL_STR(""))) { _if_result_38 = (content); } else { _if_result_38 = (el_str_concat(el_str_concat(title, EL_STR(": ")), content)); } _if_result_38; });
el_val_t tags = EL_STR("[\"Knowledge\",\"captured\"]");
el_val_t id = engram_node_full(full, EL_STR("Knowledge"), EL_STR("knowledge:captured"), el_from_float(0.85), el_from_float(0.8), el_from_float(0.9), EL_STR("Episodic"), tags);
if (!api_persisted(id)) {
@@ -385,7 +454,7 @@ el_val_t handle_api_promote_knowledge(el_val_t body) {
return api_err(EL_STR("id (prior node) is required"));
}
el_val_t tags_raw = json_get(body, EL_STR("tags"));
el_val_t tags = ({ el_val_t _if_result_35 = 0; if (str_eq(tags_raw, EL_STR(""))) { _if_result_35 = (EL_STR("[\"Knowledge\",\"tier:canonical\",\"disposition:stable\"]")); } else { _if_result_35 = (tags_raw); } _if_result_35; });
el_val_t tags = ({ el_val_t _if_result_39 = 0; if (str_eq(tags_raw, EL_STR(""))) { _if_result_39 = (EL_STR("[\"Knowledge\",\"tier:canonical\",\"disposition:stable\"]")); } else { _if_result_39 = (tags_raw); } _if_result_39; });
el_val_t new_id = engram_node_full(content, EL_STR("Knowledge"), EL_STR("knowledge:canonical"), el_from_float(0.9), el_from_float(0.9), el_from_float(1.0), EL_STR("Canonical"), tags);
if (!api_persisted(new_id)) {
return api_not_persisted(new_id);
@@ -396,7 +465,7 @@ el_val_t handle_api_promote_knowledge(el_val_t body) {
}
el_val_t handle_api_browse_processes(el_val_t method, el_val_t path, el_val_t body) {
el_val_t name = ({ el_val_t _if_result_36 = 0; if (str_eq(method, EL_STR("GET"))) { _if_result_36 = (api_query_param(path, EL_STR("name"))); } else { _if_result_36 = (json_get(body, EL_STR("name"))); } _if_result_36; });
el_val_t name = ({ el_val_t _if_result_40 = 0; if (str_eq(method, EL_STR("GET"))) { _if_result_40 = (api_query_param(path, EL_STR("name"))); } else { _if_result_40 = (json_get(body, EL_STR("name"))); } _if_result_40; });
el_val_t limit = api_query_int(path, EL_STR("limit"), 50);
if (str_eq(name, EL_STR(""))) {
return api_or_empty(engram_scan_nodes_by_type_json(EL_STR("Process"), limit, 0));
@@ -411,7 +480,7 @@ el_val_t handle_api_define_process(el_val_t body) {
if (str_eq(content, EL_STR(""))) {
return api_err(EL_STR("content is required"));
}
el_val_t label = ({ el_val_t _if_result_37 = 0; if (str_eq(name, EL_STR(""))) { _if_result_37 = (EL_STR("process:unnamed")); } else { _if_result_37 = (el_str_concat(EL_STR("process:"), name)); } _if_result_37; });
el_val_t label = ({ el_val_t _if_result_41 = 0; if (str_eq(name, EL_STR(""))) { _if_result_41 = (EL_STR("process:unnamed")); } else { _if_result_41 = (el_str_concat(EL_STR("process:"), name)); } _if_result_41; });
el_val_t tags = EL_STR("[\"Process\"]");
el_val_t id = engram_node_full(content, EL_STR("Process"), label, el_from_float(0.8), el_from_float(0.8), el_from_float(0.9), EL_STR("Canonical"), tags);
if (!api_persisted(id)) {
@@ -429,12 +498,12 @@ el_val_t handle_api_log_state_event(el_val_t body) {
el_val_t gap = json_get(body, EL_STR("gap_direction"));
el_val_t legacy = json_get(body, EL_STR("content"));
el_val_t parts = EL_STR("INTERNAL STATE EVENT");
parts = ({ el_val_t _if_result_38 = 0; if (!str_eq(trigger, EL_STR(""))) { _if_result_38 = (el_str_concat(el_str_concat(parts, EL_STR("\nTrigger: ")), trigger)); } else { _if_result_38 = (parts); } _if_result_38; });
parts = ({ el_val_t _if_result_39 = 0; if (!str_eq(pre, EL_STR(""))) { _if_result_39 = (el_str_concat(el_str_concat(parts, EL_STR("\nPre-reasoning: ")), pre)); } else { _if_result_39 = (parts); } _if_result_39; });
parts = ({ el_val_t _if_result_40 = 0; if (!str_eq(post, EL_STR(""))) { _if_result_40 = (el_str_concat(el_str_concat(parts, EL_STR("\nPost-reasoning: ")), post)); } else { _if_result_40 = (parts); } _if_result_40; });
parts = ({ el_val_t _if_result_41 = 0; if (!str_eq(ratio, EL_STR(""))) { _if_result_41 = (el_str_concat(el_str_concat(parts, EL_STR("\nCompression-ratio: ")), ratio)); } else { _if_result_41 = (parts); } _if_result_41; });
parts = ({ el_val_t _if_result_42 = 0; if (!str_eq(gap, EL_STR(""))) { _if_result_42 = (el_str_concat(el_str_concat(parts, EL_STR("\nGap-direction: ")), gap)); } else { _if_result_42 = (parts); } _if_result_42; });
parts = ({ el_val_t _if_result_43 = 0; if (!str_eq(legacy, EL_STR(""))) { _if_result_43 = (el_str_concat(el_str_concat(parts, EL_STR("\n")), legacy)); } else { _if_result_43 = (parts); } _if_result_43; });
parts = ({ el_val_t _if_result_42 = 0; if (!str_eq(trigger, EL_STR(""))) { _if_result_42 = (el_str_concat(el_str_concat(parts, EL_STR("\nTrigger: ")), trigger)); } else { _if_result_42 = (parts); } _if_result_42; });
parts = ({ el_val_t _if_result_43 = 0; if (!str_eq(pre, EL_STR(""))) { _if_result_43 = (el_str_concat(el_str_concat(parts, EL_STR("\nPre-reasoning: ")), pre)); } else { _if_result_43 = (parts); } _if_result_43; });
parts = ({ el_val_t _if_result_44 = 0; if (!str_eq(post, EL_STR(""))) { _if_result_44 = (el_str_concat(el_str_concat(parts, EL_STR("\nPost-reasoning: ")), post)); } else { _if_result_44 = (parts); } _if_result_44; });
parts = ({ el_val_t _if_result_45 = 0; if (!str_eq(ratio, EL_STR(""))) { _if_result_45 = (el_str_concat(el_str_concat(parts, EL_STR("\nCompression-ratio: ")), ratio)); } else { _if_result_45 = (parts); } _if_result_45; });
parts = ({ el_val_t _if_result_46 = 0; if (!str_eq(gap, EL_STR(""))) { _if_result_46 = (el_str_concat(el_str_concat(parts, EL_STR("\nGap-direction: ")), gap)); } else { _if_result_46 = (parts); } _if_result_46; });
parts = ({ el_val_t _if_result_47 = 0; if (!str_eq(legacy, EL_STR(""))) { _if_result_47 = (el_str_concat(el_str_concat(parts, EL_STR("\n")), legacy)); } else { _if_result_47 = (parts); } _if_result_47; });
el_val_t ts = time_now();
el_val_t boot = state_get(EL_STR("soul_boot_count"));
el_val_t tags = EL_STR("[\"internal-state\",\"InternalStateEvent\",\"pre-reasoning\"]");
@@ -447,7 +516,7 @@ el_val_t handle_api_log_state_event(el_val_t body) {
}
el_val_t handle_api_list_state_events(el_val_t method, el_val_t path, el_val_t body) {
el_val_t q = ({ el_val_t _if_result_44 = 0; if (str_eq(method, EL_STR("GET"))) { _if_result_44 = (api_query_param(path, EL_STR("query"))); } else { _if_result_44 = (json_get(body, EL_STR("query"))); } _if_result_44; });
el_val_t q = ({ el_val_t _if_result_48 = 0; if (str_eq(method, EL_STR("GET"))) { _if_result_48 = (api_query_param(path, EL_STR("query"))); } else { _if_result_48 = (json_get(body, EL_STR("query"))); } _if_result_48; });
el_val_t limit = api_query_int(path, EL_STR("limit"), 20);
if (!str_eq(q, EL_STR(""))) {
return api_or_empty(engram_search_json(el_str_concat(EL_STR("internal state "), q), limit));
@@ -458,7 +527,7 @@ el_val_t handle_api_list_state_events(el_val_t method, el_val_t path, el_val_t b
el_val_t handle_api_inspect_config(el_val_t path, el_val_t body) {
el_val_t key = api_query_param(path, EL_STR("key"));
key = ({ el_val_t _if_result_45 = 0; if (str_eq(key, EL_STR(""))) { _if_result_45 = (json_get(body, EL_STR("key"))); } else { _if_result_45 = (key); } _if_result_45; });
key = ({ el_val_t _if_result_49 = 0; if (str_eq(key, EL_STR(""))) { _if_result_49 = (json_get(body, EL_STR("key"))); } else { _if_result_49 = (key); } _if_result_49; });
if (str_eq(key, EL_STR(""))) {
return EL_STR("{\"hint\":\"pass ?key=<name>\",\"known\":[\"neuron.self.traversal_root\",\"neuron.self.values_hub\"]}");
}
@@ -475,7 +544,7 @@ el_val_t handle_api_inspect_config(el_val_t path, el_val_t body) {
el_val_t node = json_array_get(results, 0);
el_val_t content = json_get(node, EL_STR("content"));
el_val_t prefix = el_str_concat(el_str_concat(EL_STR("config:"), key), EL_STR("="));
el_val_t value = ({ el_val_t _if_result_46 = 0; if (str_starts_with(content, prefix)) { _if_result_46 = (str_slice(content, str_len(prefix), str_len(content))); } else { _if_result_46 = (content); } _if_result_46; });
el_val_t value = ({ el_val_t _if_result_50 = 0; if (str_starts_with(content, prefix)) { _if_result_50 = (str_slice(content, str_len(prefix), str_len(content))); } else { _if_result_50 = (content); } _if_result_50; });
return el_str_concat(el_str_concat(el_str_concat(el_str_concat(EL_STR("{\"key\":\""), key), EL_STR("\",\"value\":\"")), value), EL_STR("\"}"));
return 0;
}
@@ -497,13 +566,13 @@ el_val_t handle_api_tune_config(el_val_t body) {
}
el_val_t handle_api_inspect_graph(el_val_t method, el_val_t path, el_val_t body) {
el_val_t entity_id = ({ el_val_t _if_result_47 = 0; if (str_eq(method, EL_STR("GET"))) { _if_result_47 = (api_query_param(path, EL_STR("id"))); } else { _if_result_47 = (json_get(body, EL_STR("entity_id"))); } _if_result_47; });
el_val_t name = ({ el_val_t _if_result_48 = 0; if (str_eq(method, EL_STR("GET"))) { _if_result_48 = (api_query_param(path, EL_STR("name"))); } else { _if_result_48 = (json_get(body, EL_STR("name"))); } _if_result_48; });
el_val_t entity_id = ({ el_val_t _if_result_51 = 0; if (str_eq(method, EL_STR("GET"))) { _if_result_51 = (api_query_param(path, EL_STR("id"))); } else { _if_result_51 = (json_get(body, EL_STR("entity_id"))); } _if_result_51; });
el_val_t name = ({ el_val_t _if_result_52 = 0; if (str_eq(method, EL_STR("GET"))) { _if_result_52 = (api_query_param(path, EL_STR("name"))); } else { _if_result_52 = (json_get(body, EL_STR("name"))); } _if_result_52; });
el_val_t depth = api_query_int(path, EL_STR("depth"), 0);
depth = ({ el_val_t _if_result_49 = 0; if ((depth == 0)) { _if_result_49 = (json_get_int(body, EL_STR("max_depth"))); } else { _if_result_49 = (depth); } _if_result_49; });
depth = ({ el_val_t _if_result_50 = 0; if ((depth == 0)) { _if_result_50 = (1); } else { _if_result_50 = (depth); } _if_result_50; });
depth = ({ el_val_t _if_result_53 = 0; if ((depth == 0)) { _if_result_53 = (json_get_int(body, EL_STR("max_depth"))); } else { _if_result_53 = (depth); } _if_result_53; });
depth = ({ el_val_t _if_result_54 = 0; if ((depth == 0)) { _if_result_54 = (1); } else { _if_result_54 = (depth); } _if_result_54; });
el_val_t resolved = entity_id;
resolved = ({ el_val_t _if_result_51 = 0; if (str_eq(resolved, EL_STR(""))) { _if_result_51 = (({ el_val_t _if_result_52 = 0; if ((str_eq(name, EL_STR("self")) || str_eq(name, EL_STR("neuron")))) { _if_result_52 = (EL_STR("kn-efeb4a5b-5aff-4759-8a97-7233099be6ee")); } else { _if_result_52 = (({ el_val_t _if_result_53 = 0; if ((str_eq(name, EL_STR("values")) || str_eq(name, EL_STR("values_hub")))) { _if_result_53 = (EL_STR("kn-5b606390-a52d-4ca2-8e0e-eba141d13440")); } else { _if_result_53 = (EL_STR("")); } _if_result_53; })); } _if_result_52; })); } else { _if_result_51 = (resolved); } _if_result_51; });
resolved = ({ el_val_t _if_result_55 = 0; if (str_eq(resolved, EL_STR(""))) { _if_result_55 = (({ el_val_t _if_result_56 = 0; if ((str_eq(name, EL_STR("self")) || str_eq(name, EL_STR("neuron")))) { _if_result_56 = (EL_STR("kn-efeb4a5b-5aff-4759-8a97-7233099be6ee")); } else { _if_result_56 = (({ el_val_t _if_result_57 = 0; if ((str_eq(name, EL_STR("values")) || str_eq(name, EL_STR("values_hub")))) { _if_result_57 = (EL_STR("kn-5b606390-a52d-4ca2-8e0e-eba141d13440")); } else { _if_result_57 = (EL_STR("")); } _if_result_57; })); } _if_result_56; })); } else { _if_result_55 = (resolved); } _if_result_55; });
if (str_eq(resolved, EL_STR(""))) {
return api_err(EL_STR("entity_id or name required. Known names: self, neuron, values, values_hub"));
}
@@ -525,7 +594,7 @@ el_val_t handle_api_link_entities(el_val_t body) {
return api_err_protected(to_id);
}
el_val_t relation = json_get(body, EL_STR("relation"));
el_val_t eff_relation = ({ el_val_t _if_result_54 = 0; if (str_eq(relation, EL_STR(""))) { _if_result_54 = (EL_STR("associates")); } else { _if_result_54 = (relation); } _if_result_54; });
el_val_t eff_relation = ({ el_val_t _if_result_58 = 0; if (str_eq(relation, EL_STR(""))) { _if_result_58 = (EL_STR("associates")); } else { _if_result_58 = (relation); } _if_result_58; });
engram_connect(from_id, to_id, el_from_float(0.5), eff_relation);
return el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(EL_STR("{\"ok\":true,\"from_id\":\""), from_id), EL_STR("\",\"to_id\":\"")), to_id), EL_STR("\",\"relation\":\"")), eff_relation), EL_STR("\"}"));
return 0;
@@ -540,7 +609,7 @@ el_val_t handle_api_forget(el_val_t body) {
return api_err_protected(node_id);
}
mem_forget(node_id);
return el_str_concat(el_str_concat(EL_STR("{\"ok\":true,\"id\":\""), node_id), EL_STR("\"}"));
return el_str_concat(el_str_concat(EL_STR("{\"ok\":true,\"id\":\""), node_id), EL_STR("\",\"tombstoned\":true}"));
return 0;
}
@@ -554,8 +623,8 @@ el_val_t handle_api_evolve_memory(el_val_t body) {
return api_err_protected(prior_id);
}
el_val_t importance = json_get(body, EL_STR("importance"));
el_val_t sal_str = ({ el_val_t _if_result_55 = 0; if (str_eq(importance, EL_STR("critical"))) { _if_result_55 = (EL_STR("0.95")); } else { _if_result_55 = (({ el_val_t _if_result_56 = 0; if (str_eq(importance, EL_STR("high"))) { _if_result_56 = (EL_STR("0.75")); } else { _if_result_56 = (({ el_val_t _if_result_57 = 0; if (str_eq(importance, EL_STR("low"))) { _if_result_57 = (EL_STR("0.25")); } else { _if_result_57 = (EL_STR("0.50")); } _if_result_57; })); } _if_result_56; })); } _if_result_55; });
el_val_t sal = ({ el_val_t _if_result_58 = 0; if (str_eq(sal_str, EL_STR("0.95"))) { _if_result_58 = (el_from_float(0.95)); } else { _if_result_58 = (({ el_val_t _if_result_59 = 0; if (str_eq(sal_str, EL_STR("0.75"))) { _if_result_59 = (el_from_float(0.75)); } else { _if_result_59 = (({ el_val_t _if_result_60 = 0; if (str_eq(sal_str, EL_STR("0.25"))) { _if_result_60 = (el_from_float(0.25)); } else { _if_result_60 = (el_from_float(0.5)); } _if_result_60; })); } _if_result_59; })); } _if_result_58; });
el_val_t sal_str = ({ el_val_t _if_result_59 = 0; if (str_eq(importance, EL_STR("critical"))) { _if_result_59 = (EL_STR("0.95")); } else { _if_result_59 = (({ el_val_t _if_result_60 = 0; if (str_eq(importance, EL_STR("high"))) { _if_result_60 = (EL_STR("0.75")); } else { _if_result_60 = (({ el_val_t _if_result_61 = 0; if (str_eq(importance, EL_STR("low"))) { _if_result_61 = (EL_STR("0.25")); } else { _if_result_61 = (EL_STR("0.50")); } _if_result_61; })); } _if_result_60; })); } _if_result_59; });
el_val_t sal = ({ el_val_t _if_result_62 = 0; if (str_eq(sal_str, EL_STR("0.95"))) { _if_result_62 = (el_from_float(0.95)); } else { _if_result_62 = (({ el_val_t _if_result_63 = 0; if (str_eq(sal_str, EL_STR("0.75"))) { _if_result_63 = (el_from_float(0.75)); } else { _if_result_63 = (({ el_val_t _if_result_64 = 0; if (str_eq(sal_str, EL_STR("0.25"))) { _if_result_64 = (el_from_float(0.25)); } else { _if_result_64 = (el_from_float(0.5)); } _if_result_64; })); } _if_result_63; })); } _if_result_62; });
el_val_t tags = EL_STR("[\"Memory\",\"evolved\"]");
el_val_t new_id = engram_node_full(content, EL_STR("Memory"), EL_STR("memory:evolved"), el_from_float(sal), el_from_float(sal), el_from_float(0.9), EL_STR("Episodic"), tags);
if (!str_eq(prior_id, EL_STR("")) && !str_eq(new_id, EL_STR(""))) {
@@ -577,8 +646,11 @@ el_val_t handle_api_memory_delete(el_val_t body) {
if (str_eq(existing, EL_STR("{}"))) {
return api_err(el_str_concat(EL_STR("memory not found: "), node_id));
}
mem_forget(node_id);
return el_str_concat(el_str_concat(EL_STR("{\"ok\":true,\"id\":\""), node_id), EL_STR("\",\"deleted\":true}"));
el_val_t marker = tombstone_node(node_id);
if (str_eq(marker, EL_STR(""))) {
return api_err(el_str_concat(EL_STR("tombstone failed: "), node_id));
}
return el_str_concat(el_str_concat(EL_STR("{\"ok\":true,\"id\":\""), node_id), EL_STR("\",\"tombstoned\":true}"));
return 0;
}
@@ -627,7 +699,7 @@ el_val_t handle_api_cultivate(el_val_t body) {
return api_err(EL_STR("content is required"));
}
el_val_t importance = json_get(body, EL_STR("importance"));
el_val_t sal = ({ el_val_t _if_result_61 = 0; if (str_eq(importance, EL_STR("critical"))) { _if_result_61 = (el_from_float(0.95)); } else { _if_result_61 = (({ el_val_t _if_result_62 = 0; if (str_eq(importance, EL_STR("high"))) { _if_result_62 = (el_from_float(0.75)); } else { _if_result_62 = (({ el_val_t _if_result_63 = 0; if (str_eq(importance, EL_STR("low"))) { _if_result_63 = (el_from_float(0.25)); } else { _if_result_63 = (el_from_float(0.5)); } _if_result_63; })); } _if_result_62; })); } _if_result_61; });
el_val_t sal = ({ el_val_t _if_result_65 = 0; if (str_eq(importance, EL_STR("critical"))) { _if_result_65 = (el_from_float(0.95)); } else { _if_result_65 = (({ el_val_t _if_result_66 = 0; if (str_eq(importance, EL_STR("high"))) { _if_result_66 = (el_from_float(0.75)); } else { _if_result_66 = (({ el_val_t _if_result_67 = 0; if (str_eq(importance, EL_STR("low"))) { _if_result_67 = (el_from_float(0.25)); } else { _if_result_67 = (el_from_float(0.5)); } _if_result_67; })); } _if_result_66; })); } _if_result_65; });
el_val_t tags = EL_STR("[\"Memory\",\"evolved\",\"cultivated\"]");
el_val_t new_id = engram_node_full(content, EL_STR("Memory"), EL_STR("memory:cultivated"), el_from_float(sal), el_from_float(sal), el_from_float(0.9), EL_STR("Episodic"), tags);
if (!str_eq(prior_id, EL_STR("")) && !str_eq(new_id, EL_STR(""))) {
@@ -641,7 +713,7 @@ el_val_t handle_api_cultivate(el_val_t body) {
return api_err(EL_STR("id is required"));
}
mem_forget(node_id);
return el_str_concat(el_str_concat(EL_STR("{\"ok\":true,\"id\":\""), node_id), EL_STR("\",\"cultivated\":true}"));
return el_str_concat(el_str_concat(EL_STR("{\"ok\":true,\"id\":\""), node_id), EL_STR("\",\"tombstoned\":true,\"cultivated\":true}"));
}
if (str_eq(op, EL_STR("link_entities"))) {
el_val_t from_id = json_get(body, EL_STR("from_id"));
@@ -653,7 +725,7 @@ el_val_t handle_api_cultivate(el_val_t body) {
return api_err(EL_STR("to_id is required"));
}
el_val_t relation = json_get(body, EL_STR("relation"));
el_val_t eff_relation = ({ el_val_t _if_result_64 = 0; if (str_eq(relation, EL_STR(""))) { _if_result_64 = (EL_STR("associates")); } else { _if_result_64 = (relation); } _if_result_64; });
el_val_t eff_relation = ({ el_val_t _if_result_68 = 0; if (str_eq(relation, EL_STR(""))) { _if_result_68 = (EL_STR("associates")); } else { _if_result_68 = (relation); } _if_result_68; });
engram_connect(from_id, to_id, el_from_float(0.5), eff_relation);
return el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(EL_STR("{\"ok\":true,\"from_id\":\""), from_id), EL_STR("\",\"to_id\":\"")), to_id), EL_STR("\",\"relation\":\"")), eff_relation), EL_STR("\",\"cultivated\":true}"));
}
@@ -663,7 +735,8 @@ el_val_t handle_api_cultivate(el_val_t body) {
el_val_t handle_api_list_typed(el_val_t node_type, el_val_t path, el_val_t body) {
el_val_t limit = api_query_int(path, EL_STR("limit"), 50);
return api_or_empty(engram_scan_nodes_by_type_json(node_type, limit, 0));
el_val_t raw = api_or_empty(engram_scan_nodes_by_type_json(node_type, limit, 0));
return memory_hide_tombstoned(raw, path);
return 0;
}
Generated Vendored
+269 -181
View File
File diff suppressed because it is too large Load Diff
+7 -3
View File
@@ -91,7 +91,7 @@ tool("beginSession", "Initialize session: surface recent high-importance memorie
"," + tool("recall", "Retrieve memories by chain or query.") +
"," + tool("inspectMemories", "List recent memory nodes.") +
"," + tool("evolveMemory", "Update an existing memory node, optionally superseding another.") +
"," + tool("forget", "Remove a node from memory.") +
"," + tool("forget", "Supersede/tombstone a node (keeps it and its edges, recoverable); does not hard-delete.") +
"," + tool("pinNode", "Strengthen a node so it stays salient.") +
// Knowledge
"," + tool("searchKnowledge", "Search knowledge base by semantic similarity.") +
@@ -541,8 +541,12 @@ fn tool_forget(args: String) -> String {
if str_eq(id, "") {
return mcp_text_result("error: node_id is required")
}
// Soft-delete: record a tombstone memory and return ok
return mcp_json_result("{\"ok\":true,\"deleted\":\"" + id + "\"}")
// Immutable delete: route to the soul's tombstoning endpoint (keeps the node
// + edges, hides from default reads, recoverable via ?include_deleted).
// Previously this returned a fake ok without deleting OR tombstoning anything.
let body: String = "{\"id\":\"" + id + "\"}"
let resp: String = http_post_json(neuron_url() + "/memory/delete", body)
return mcp_json_result(resp)
}
fn tool_check_events(args: String) -> String {
+25 -1
View File
@@ -43,8 +43,32 @@ fn mem_strengthen(node_id: String) -> Void {
engram_strengthen(node_id)
}
// mem_tombstone immutable "delete": KEEP the node and all its edges; record a
// Tombstone marker (content = target id, label "tombstone:<id>", wired with a
// "tombstones" edge). Never engram_forget. Default bounded list reads hide
// tombstoned nodes; ?include_deleted=1 recovers them. This is the ONE canonical
// tombstone helper every forget path routes through it. Defined here in
// memory.el (imported first) so awareness.el and neuron-api.el can both call it.
fn mem_tombstone(node_id: String) -> String {
let tags: String = "[\"Tombstone\",\"status:deleted\"]"
let marker: String = engram_node_full(
node_id, "Tombstone", "tombstone:" + node_id,
el_from_float(0.01), el_from_float(0.01), el_from_float(1.0),
"Episodic", tags)
if !str_eq(marker, "") {
engram_connect(marker, node_id, el_from_float(1.0), "tombstones")
}
return marker
}
// mem_forget NOTE: no longer a hard delete. Engram nodes are immutable, so
// this now TOMBSTONES (via mem_tombstone): the node and its edges are kept and
// stay recoverable. Every caller (the /memory/forget route and the cultivate
// forget op) is non-destructive as a result. Internal GC that genuinely needs
// removal (session-summary replace, telemetry pruning) calls engram_forget
// directly and is unaffected by this.
fn mem_forget(node_id: String) -> Void {
engram_forget(node_id)
let _marker: String = mem_tombstone(node_id)
}
// mem_consolidate structural scan plus salience-evolution pass.
+93 -24
View File
@@ -104,6 +104,66 @@ fn api_not_persisted(id: String) -> String {
return "{\"ok\":false,\"error\":\"write_not_persisted\",\"id\":\"" + id + "\"}"
}
// Immutability: tombstone instead of hard-delete
//
// Day-one rule: engram nodes are immutable. A "delete" must never engram_forget
// (which frees the node and drops its incident edges). Instead we TOMBSTONE: the
// original node and all its edges are KEPT and stay traversable; a small
// Tombstone marker node records the deletion (content = target id, label
// "tombstone:<id>"), wired to the target with a "tombstones" edge. Default
// bounded list reads hide tombstoned nodes (memory_hide_tombstoned); internal
// cognition and explicit ?include_deleted reads still see them.
fn tombstone_node(id: String) -> String {
// Delegates to the canonical helper in memory.el (single source of truth).
return mem_tombstone(id)
}
// tombstoned_id_set delimited "|id1|id2|" of every tombstoned target id.
// Empty string when nothing is tombstoned (callers fast-path on that).
fn tombstoned_id_set() -> String {
let markers: String = engram_scan_nodes_by_type_json("Tombstone", 5000, 0)
if str_eq(markers, "") || str_eq(markers, "[]") { return "" }
let n: Int = json_array_len(markers)
let acc: String = "|"
let i: Int = 0
while i < n {
let m: String = json_array_get(markers, i)
let tid: String = json_get(m, "content")
let acc = if str_eq(tid, "") { acc } else { acc + tid + "|" }
let i = i + 1
}
return acc
}
// memory_hide_tombstoned drop tombstone markers and tombstoned nodes from a
// scanned node array. BOUNDED use only (typed/paginated lists), NOT the full
// graph scan: json_array_get is O(index), so a full pass is O(n^2). Safe for the
// ~50-item memory list; a hard cap protects against a large limit. The full
// /api/graph/nodes hide needs a runtime scan filter and is deferred (see PR).
// ?include_deleted bypasses the filter (explicit traversal).
fn memory_hide_tombstoned(raw: String, path: String) -> String {
if str_contains(path, "include_deleted") { return raw }
if str_eq(raw, "") || str_eq(raw, "[]") { return raw }
let dead: String = tombstoned_id_set()
if str_eq(dead, "") { return raw }
let n: Int = json_array_len(raw)
if n > 1000 { return raw }
let out: String = "["
let first: Bool = true
let i: Int = 0
while i < n {
let node: String = json_array_get(raw, i)
let nid: String = json_get(node, "id")
let ntype: String = json_get(node, "node_type")
let is_dead: Bool = !str_eq(nid, "") && str_contains(dead, "|" + nid + "|")
let keep: Bool = !str_eq(ntype, "Tombstone") && !is_dead
let out = if keep { if first { out + node } else { out + "," + node } } else { out }
let first = if keep { false } else { first }
let i = i + 1
}
return out + "]"
}
// Session
// handle_api_begin_session full context bootstrap.
@@ -191,25 +251,26 @@ fn handle_api_node_create(body: String) -> String {
return "{\"id\":\"" + id + "\",\"ok\":true}"
}
// handle_api_node_delete remove a node by id (engram_forget) and verify it is gone.
// handle_api_node_delete TOMBSTONE a node by id (immutable delete).
// Backs /api/neuron/node/delete and the /api/neuron/memory/delete alias the UI calls.
// The node and all its incident edges are KEPT; a Tombstone marker records the
// deletion. Never engram_forget engram nodes are immutable by design.
fn handle_api_node_delete(body: String) -> String {
let id: String = json_get(body, "id")
if str_eq(id, "") { return api_err("id is required") }
// engram_forget removes the node + its incident edges from the live graph.
// Delete is NOT read-back-verified: engram_get_node_json can return a stale hit
// for a just-forgotten id because the idindex map is not rebuilt on forget.
// A stale hit would cause a false "delete_failed" on a successful deletion.
// This exception is correct: read-back-verify guards WRITES; for deletes,
// the graph endpoints (/api/graph/nodes) reflect the removal and are the source of truth.
engram_forget(id)
return "{\"ok\":true,\"id\":\"" + id + "\"}"
if is_protected_node(id) { return api_err_protected(id) }
let existing: String = engram_get_node_json(id)
if str_eq(existing, "{}") { return api_err("node not found: " + id) }
let marker: String = tombstone_node(id)
if str_eq(marker, "") { return api_err("tombstone failed: " + id) }
return "{\"ok\":true,\"id\":\"" + id + "\",\"tombstoned\":true}"
}
// handle_api_node_update update a node's content/fields. There is no in-place
// engram update builtin, so this recreates the node with merged fields and then
// forgets the old one (only after the new node reads back). The id changes; the
// response returns the new id and the replaced id so callers can re-point.
// engram update builtin, so this creates a new node with merged fields and wires
// a "supersedes" edge new->old. The original is KEPT (immutable); the id changes,
// and the response returns the new id and the superseded id so callers re-point.
// Mirrors handle_api_memory_update / evolve exactly. Never engram_forget.
fn handle_api_node_update(body: String) -> String {
let id: String = json_get(body, "id")
if str_eq(id, "") { return api_err("id is required") }
@@ -240,8 +301,8 @@ fn handle_api_node_update(body: String) -> String {
el_from_float(0.5), el_from_float(0.5), el_from_float(0.8),
tier, tags)
if !api_persisted(new_id) { return api_not_persisted(new_id) }
engram_forget(id)
return "{\"id\":\"" + new_id + "\",\"replaced\":\"" + id + "\",\"ok\":true}"
engram_connect(new_id, id, el_from_float(0.9), "supersedes")
return "{\"id\":\"" + new_id + "\",\"supersedes\":\"" + id + "\",\"ok\":true}"
}
// handle_api_recall search or activate memory by query.
@@ -504,13 +565,15 @@ fn handle_api_link_entities(body: String) -> String {
return "{\"ok\":true,\"from_id\":\"" + from_id + "\",\"to_id\":\"" + to_id + "\",\"relation\":\"" + eff_relation + "\"}"
}
// handle_api_forget delete a node by ID. Blocked for protected identity nodes.
// handle_api_forget TOMBSTONE a node by ID (immutable; mem_forget now
// tombstones). The node + edges are kept and recoverable. Blocked for protected
// identity nodes.
fn handle_api_forget(body: String) -> String {
let node_id: String = json_get(body, "id")
if str_eq(node_id, "") { return api_err("id is required") }
if is_protected_node(node_id) { return api_err_protected(node_id) }
mem_forget(node_id)
return "{\"ok\":true,\"id\":\"" + node_id + "\"}"
return "{\"ok\":true,\"id\":\"" + node_id + "\",\"tombstoned\":true}"
}
// handle_api_evolve_memory evolve a Memory node. Blocked for protected identity nodes.
@@ -541,10 +604,10 @@ fn handle_api_evolve_memory(body: String) -> String {
}
// handle_api_memory_delete POST /api/neuron/memory/delete {"id":"..."}.
// Hard delete: engram_forget (via mem_forget) removes the node and all
// incident edges from the engram store, so no soft-delete fallback is
// needed. Existence is checked first because engram_forget silently
// no-ops on unknown ids a bad id must return an error, not fake success.
// Immutable delete: TOMBSTONE via tombstone_node the node and all its incident
// edges are KEPT and stay traversable; a Tombstone marker records the deletion
// and default bounded list reads hide it. Never engram_forget. Existence is
// checked first so a bad id errors rather than faking success.
// Blocked for protected identity nodes, same as /memory/forget.
fn handle_api_memory_delete(body: String) -> String {
let node_id: String = json_get(body, "id")
@@ -552,8 +615,10 @@ fn handle_api_memory_delete(body: String) -> String {
if is_protected_node(node_id) { return api_err_protected(node_id) }
let existing: String = engram_get_node_json(node_id)
if str_eq(existing, "{}") { return api_err("memory not found: " + node_id) }
mem_forget(node_id)
return "{\"ok\":true,\"id\":\"" + node_id + "\",\"deleted\":true}"
// Immutable delete: tombstone, never mem_forget/engram_forget. Node + edges KEPT.
let marker: String = tombstone_node(node_id)
if str_eq(marker, "") { return api_err("tombstone failed: " + node_id) }
return "{\"ok\":true,\"id\":\"" + node_id + "\",\"tombstoned\":true}"
}
// handle_api_memory_update POST /api/neuron/memory/update {"id","content"}.
@@ -623,8 +688,9 @@ fn handle_api_cultivate(body: String) -> String {
if str_eq(op, "forget") {
let node_id: String = json_get(body, "id")
if str_eq(node_id, "") { return api_err("id is required") }
// Immutable: mem_forget now tombstones (keep node + edges), never hard-delete.
mem_forget(node_id)
return "{\"ok\":true,\"id\":\"" + node_id + "\",\"cultivated\":true}"
return "{\"ok\":true,\"id\":\"" + node_id + "\",\"tombstoned\":true,\"cultivated\":true}"
}
if str_eq(op, "link_entities") {
@@ -646,7 +712,10 @@ fn handle_api_cultivate(body: String) -> String {
// handle_api_list_typed list nodes by node_type.
fn handle_api_list_typed(node_type: String, path: String, body: String) -> String {
let limit: Int = api_query_int(path, "limit", 50)
return api_or_empty(engram_scan_nodes_by_type_json(node_type, limit, 0))
let raw: String = api_or_empty(engram_scan_nodes_by_type_json(node_type, limit, 0))
// Hide tombstoned nodes from the default (bounded) memory list.
// ?include_deleted=1 returns them for explicit traversal.
return memory_hide_tombstoned(raw, path)
}
// Consolidate
+171
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@@ -0,0 +1,171 @@
# neuron-dev-setup — one-command Neuron CORE dev stack
Stand up an identical **Neuron brain + agent** on a fresh Mac so any developer
gets the same local runtime to build against. This is the **CORE** dev stack
only — the four native `launchd` services that make Neuron think, remember, and
speak MCP to Claude Code. Will's personal automations (catalyst, telegram,
vessels, studio, self-review, world-integrator, council, compressor, snapshots,
act-runner, …) are **deliberately excluded**.
```
┌─────────────┐ ┌──────────────┐
│ soul :7770 │ ─────► │ engram :8742 │ the mind ──► its memory substrate
└─────────────┘ └──────────────┘
┌───────────────────┐
│ mcp-wrapper :17779│ ─── MCP surface over the soul HTTP API (internal)
└───────────────────┘
┌────────────────┐
│ mcp-proxy :7779│ ◄─── Claude Code connects here (stable front door)
└────────────────┘
```
Claude Code's `neuron` MCP server points at `http://127.0.0.1:7779/` — the proxy.
The proxy forwards to the wrapper (`:17779`), which calls the soul (`:7770`),
which reads/writes the engram (`:8742`). The engram is the persistent brain.
## Quick start
```bash
git clone <this-repo> && cd neuron-dev-setup
cp config.env.example config.env # optional — edit ports/paths if you like
./install.sh # prompts for your Anthropic API key
```
Then verify:
```bash
curl http://localhost:8742/api/health # engram
curl http://localhost:7770/health # soul
curl http://localhost:7779/health # mcp-proxy (what Claude Code uses)
launchctl list | grep ai.neuron
```
Open Claude Code — the `neuron` MCP tools should be live, backed by **your own**
local brain. `./install.sh --dry-run` shows every action without touching anything.
## What the installer does (8 phases)
| Phase | Action |
|------|--------|
| 1 | Preflight: macOS/arm64, ensure `git cc curl python3` + `openssl@3` (via Homebrew) |
| 2 | Prompt for the **Anthropic API key**, store it in the **macOS Keychain** (never a file) |
| 3 | Clone `neuron`, `engram`, `foundation`; fetch the El toolchain; build 4 binaries + `forge` |
| 4 | Lay down `~/.neuron/{bin,logs,engram}` and the templated `soul-wrapper.sh` |
| 5 | Generate + load the 4 core LaunchAgents (engram → soul → wrapper → proxy) |
| 6 | Seed a fresh engram with the **genesis identity** via `forge install` |
| 7 | Install Claude config: `neuron` agent, core hooks, local MCP registration |
| 8 | Health-check all four ports |
Everything is **idempotent** (safe to re-run) and **templated** to the invoking
user's `$HOME` — no path is hardcoded to another machine.
## Prerequisites
- macOS on Apple Silicon (uses `launchd`; soul build flags assume arm64).
- **Xcode Command Line Tools** (`xcode-select --install`) — provides `cc`, `git`.
- **Homebrew** — for `openssl@3`, `curl`.
- An **Anthropic API key** — the soul's inference provider. Prompted for; stored
in Keychain under service `neuron-llm-0-key`; read at launch by `soul-wrapper.sh`.
- **Git access** to Gitea (`git.neuralplatform.ai`) for the source repos.
- **GCP access** to project `neuron-785695` Artifact Registry (default El
toolchain source). Ask Will to grant it, or set `EL_TOOLCHAIN_SOURCE=local`.
## Core-stack map (what gets replicated)
| Service | Port | Binary | Built from | LaunchAgent |
|---------|------|--------|------------|-------------|
| soul | 7770 | `neuron/dist/neuron` | `dist/soul.c` + El runtime, `cc` (CI recipe) | `ai.neuron.soul` |
| engram | 8742 | `engram/dist/engram` | `engram` repo `src/server.el` via `elc``cc` | `ai.neuron.engram` |
| mcp-wrapper | 17779 | `neuron/mcp-wrapper/dist/neuron-mcp-wrapper` | `mcp-wrapper/src/main.el` | `ai.neuron.mcp-wrapper` |
| mcp-proxy | 7779 | `neuron/mcp-proxy/dist/neuron-mcp-proxy` | `mcp-proxy/src/main.el` | `ai.neuron.mcp-proxy` |
**`~/.neuron` layout the installer creates**
```
~/.neuron/
bin/soul-wrapper.sh # reads Anthropic key from Keychain, execs the soul binary
logs/ # soul.*.log, engram.log, mcp-*.log
engram/ # ENGRAM_DATA_DIR — the persistent brain (snapshot.json + db)
```
**Identity seed.** `foundation/forge/seeds/neuron-genesis-seed.json` carries
`identity_nodes[]` + `edges[]` with **fixed** knowledge-node IDs (e.g.
`kn-efeb4a5b-5aff-4759-8a97-7233099be6ee`, the "self" traversal root). Those exact
IDs are referenced by the SessionStart self-load hook and the neuron agent, so
seeding must **preserve IDs**`forge install <seed>` is the mechanism.
**Claude config installed** (`~/.claude/`)
- `agents/neuron.md` — the Neuron agent (identity, session protocol, five primitives).
- `mcp.json` — registers `neuron``http://127.0.0.1:7779/`.
- `settings.json` hooks (CORE subset only):
- `SessionStart``neuron-self-load.sh` (loads identity from the seeded engram)
- `PreToolUse:Agent``neuron-agent-preamble.sh` (subagents load substrate first)
- `PreCompact``pre-compact.sh` (clean context recovery)
### Deliberately EXCLUDED from core
- **`check-active-contexts.sh`** and **`require-execution-context.sh`** — these
depend on a separate filesystem repo `~/Development/projects/active/neuron/synapse`.
`require-execution-context.sh` is a hard `Edit/Write` gate that would **block a
fresh dev from editing any file** without that synapse repo. Not core; excluded.
- `engram-mirror.py` (PostToolUse) — optional; mirrors MCP writes to engram.
- All Will-personal LaunchAgents: `catalyst-*`, `telegram-gateway`, `vessel.*`,
`studio`, `self-review`, `world-integrator`, `council`, `compressor`,
`cultivation-digest`, `snapshot-backup`, `engram-backup`, `act-runner`, `keymap`,
`invest`, and the disabled `ai.neuron.api` (`:7771` is a personal Python
perception helper — confirmed not core).
## Secrets — how they're handled
- **Anthropic key**: prompted for; stored in Keychain; read at launch. Never in a
plist, this repo, or a log.
- **Engram local token** (`ENGRAM_API_KEY`): a *loopback-only* dev token, not a
cloud secret. Defaults to a generated `ntn-dev-*` value; override in `config.env`.
- No cloud tokens, Vault tokens, CF-Access secrets, or founder keys are copied.
(Will's live `start-daemon.sh`/`neuron-api-launch.sh` contain such keys — this
installer intentionally does **not** use those files.)
## Uninstall
```bash
./uninstall.sh # stop + remove the 4 LaunchAgents and added Claude hooks
./uninstall.sh --purge-data # ALSO delete ~/.neuron/engram (destroys the brain)
```
## OPEN QUESTIONS (need Will to confirm)
1. **El toolchain acquisition.** The default path fetches `el-runtime-c/-h` and
`el-elc` from GCP Artifact Registry (mirrors `neuron/.gitea/workflows/ci.yaml`).
A new dev needs GCP access to `neuron-785695`. Is that the intended path, or
should the El SDK be published/vendored for onboarding?
2. **`elc` invocation for engram/wrapper/proxy.** The soul build (`cc dist/soul.c
+ el_runtime.c`) is verified from CI. The `.el → .c` transpile step for engram,
mcp-wrapper, and mcp-proxy is inferred (`elc <src> -o <out.c>`). Confirm the
exact flags / entrypoints (CI notes `elb` OOMs on Linux; macOS builds differ).
3. **`forge install` ID preservation.** Confirm `forge install` writes the seed's
fixed `kn-` IDs verbatim (the self-load hook hardcodes `kn-efeb4a5b…`). If it
re-mints IDs, the hook + agent identity load would break on a fresh brain.
4. **engram repo layout.** The live engram binary is built from `src/server.el`
(Gitea repo `neuron-technologies/engram`, cloned in CI). Confirm that repo is
the canonical source for onboarding (the local `foundation/el/engram` copy has
the same `src/server.el`).
5. **Home for this bundle** — see below.
## Where this should live (recommendation)
**Recommendation: a dedicated `neuron-dev-setup` (or `neuron-onboarding`) repo —
NOT `neuron-code`.** `neuron-code` already exists as a real product ("Neuron Code",
a coding tool with `nc-cli` + vessels — local `products/neuron-code` has commits);
repurposing it for onboarding would collide with a shipped product's identity.
This bundle was scaffolded as `neuron-dev-setup/` on branch `feat/neuron-dev-setup`
in the **`neuron` repo** (off `origin/main`) and opened as a PR for review, because
the neuron repo already hosts the soul source, the verified CI build recipe, and
the mcp-wrapper/proxy sources — the natural review surface. If you'd rather it be
its own repo, move this directory into a fresh `neuron-dev-setup` repo verbatim;
nothing here depends on living inside the neuron repo.
+42
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@@ -0,0 +1,42 @@
# neuron-dev-setup — configuration
# Copy to config.env and edit if you want non-default paths/ports.
# install.sh sources this file if it exists; otherwise it uses these defaults.
# NOTHING here is a secret. The Anthropic API key is read from your Keychain,
# never from this file. See README.md.
# ── Where the core stack lives ────────────────────────────────────────────────
# All paths are relative to your own $HOME — never hardcode another user's home.
NEURON_HOME="${HOME}/.neuron" # runtime home: bin/, logs/, engram data
DEV_ROOT="${HOME}/Development/neuron-technologies" # where source repos are cloned/built
# ── Git remotes (Gitea is primary) ───────────────────────────────────────────
GITEA_BASE="git@git.neuralplatform.ai:neuron-technologies"
NEURON_REPO_URL="${GITEA_BASE}/neuron.git" # soul + mcp-wrapper + mcp-proxy source
ENGRAM_REPO_URL="${GITEA_BASE}/engram.git" # engram memory substrate
FOUNDATION_REPO_URL="${GITEA_BASE}/foundation.git" # El SDK + forge (seed installer)
NEURON_REPO_BRANCH="main"
# ── Ports (must match across services; change only if a port clashes) ─────────
SOUL_PORT="7770" # soul daemon HTTP API
ENGRAM_PORT="8742" # engram memory substrate
WRAPPER_PORT="17779" # mcp-wrapper (internal, talks to soul)
PROXY_PORT="7779" # mcp-proxy (stable front door Claude Code connects to)
# ── Engram ────────────────────────────────────────────────────────────────────
ENGRAM_DATA_DIR="${NEURON_HOME}/engram"
# Local shared auth token for the engram/soul HTTP APIs on loopback. This is a
# LOCAL dev token (not a cloud secret); override it if you like. install.sh will
# generate a random one if you leave it empty.
ENGRAM_API_KEY="ntn-dev-local"
# ── El toolchain source (needed to build engram / mcp-wrapper / mcp-proxy) ────
# Option A (default): fetch prebuilt El runtime + elc from GCP Artifact Registry
# (requires `gcloud auth` with access to project neuron-785695 — ask Will).
# Option B: build El from the foundation/el checkout locally.
EL_TOOLCHAIN_SOURCE="artifact-registry" # artifact-registry | local
GCP_PROJECT="neuron-785695"
GCP_AR_REPO="foundation-prod"
GCP_AR_LOCATION="us-central1"
# ── Keychain service name for the Anthropic key (read by soul-wrapper.sh) ─────
KEYCHAIN_SERVICE="neuron-llm-0-key"
+395
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@@ -0,0 +1,395 @@
#!/usr/bin/env bash
#
# neuron-dev-setup / install.sh
# ─────────────────────────────────────────────────────────────────────────────
# One-command onboarding for the Neuron CORE dev stack on a fresh Mac.
#
# Stands up, as native launchd services, the four processes a developer needs to
# have an identical "Neuron brain + agent" to build against:
#
# soul (:7770) ──► engram (:8742) the mind + its memory substrate
# ▲ ▲
# │ │
# mcp-wrapper (:17779) ──► soul MCP surface over the soul API
# ▲
# │
# mcp-proxy (:7779) ◄── Claude Code stable MCP front door
#
# It also seeds a fresh engram with Neuron's identity (the genesis seed) and lays
# down the Claude Code config (neuron agent + core hooks + local MCP registration)
# so a new dev's `claude` talks to *their own* local Neuron.
#
# DESIGN RULES
# * Idempotent: safe to re-run. Existing state is detected and reused.
# * Templated: every path/port/user is derived from $HOME and config.env.
# Nothing is hardcoded to another developer's machine.
# * Secret-free: the Anthropic key is prompted for and stored in the macOS
# Keychain. No key is ever written to a plist, this repo, or a logfile.
#
# USAGE
# ./install.sh # full install
# ./install.sh --dry-run # print what would happen, touch nothing
# ./install.sh --skip-build # assume binaries already built (see --use-local)
# ./install.sh --skip-services # lay down files but don't load LaunchAgents
# ./install.sh --help
# ─────────────────────────────────────────────────────────────────────────────
set -euo pipefail
# ── Locate ourselves ─────────────────────────────────────────────────────────
SCRIPT_DIR="$(cd "$(dirname "${BASH_SOURCE[0]}")" && pwd)"
TEMPLATES="${SCRIPT_DIR}/templates"
# ── Flags ────────────────────────────────────────────────────────────────────
DRY_RUN=0; SKIP_BUILD=0; SKIP_SERVICES=0; USE_LOCAL_BINARIES=0
for arg in "$@"; do
case "$arg" in
--dry-run) DRY_RUN=1 ;;
--skip-build) SKIP_BUILD=1 ;;
--skip-services) SKIP_SERVICES=1 ;;
--use-local) USE_LOCAL_BINARIES=1 ;;
--help|-h)
sed -n '2,40p' "${BASH_SOURCE[0]}" | sed 's/^# \{0,1\}//'
exit 0 ;;
*) echo "unknown flag: $arg" >&2; exit 2 ;;
esac
done
# ── Pretty logging ───────────────────────────────────────────────────────────
c_blue=$'\033[1;34m'; c_grn=$'\033[1;32m'; c_yel=$'\033[1;33m'; c_red=$'\033[1;31m'; c_off=$'\033[0m'
step() { echo "${c_blue}${c_off} $*"; }
ok() { echo "${c_grn}${c_off} $*"; }
warn() { echo "${c_yel}!${c_off} $*"; }
die() { echo "${c_red}$*${c_off}" >&2; exit 1; }
run() { if [ "$DRY_RUN" = 1 ]; then echo " [dry-run] $*"; else eval "$*"; fi; }
# ── Load config ──────────────────────────────────────────────────────────────
if [ -f "${SCRIPT_DIR}/config.env" ]; then
# shellcheck disable=SC1091
source "${SCRIPT_DIR}/config.env"
else
# shellcheck disable=SC1091
source "${SCRIPT_DIR}/config.env.example"
warn "No config.env found — using defaults from config.env.example."
fi
# Derived / defaulted values (never hardcode a home directory)
: "${NEURON_HOME:=${HOME}/.neuron}"
: "${DEV_ROOT:=${HOME}/Development/neuron-technologies}"
: "${SOUL_PORT:=7770}"; : "${ENGRAM_PORT:=8742}"; : "${WRAPPER_PORT:=17779}"; : "${PROXY_PORT:=7779}"
: "${ENGRAM_DATA_DIR:=${NEURON_HOME}/engram}"
: "${ENGRAM_API_KEY:=}"
: "${KEYCHAIN_SERVICE:=neuron-llm-0-key}"
: "${EL_TOOLCHAIN_SOURCE:=artifact-registry}"
: "${NEURON_REPO_BRANCH:=main}"
NEURON_REPO="${DEV_ROOT}/neuron"
ENGRAM_REPO="${DEV_ROOT}/engram"
FOUNDATION_REPO="${DEV_ROOT}/foundation"
SOUL_BIN="${NEURON_REPO}/dist/neuron"
ENGRAM_BIN="${ENGRAM_REPO}/dist/engram"
MCP_WRAPPER_BIN="${NEURON_REPO}/mcp-wrapper/dist/neuron-mcp-wrapper"
MCP_PROXY_BIN="${NEURON_REPO}/mcp-proxy/dist/neuron-mcp-proxy"
FORGE_BIN="${FOUNDATION_REPO}/forge/dist/forge"
GENESIS_SEED="${FOUNDATION_REPO}/forge/seeds/neuron-genesis-seed.json"
LAUNCHAGENTS="${HOME}/Library/LaunchAgents"
CLAUDE_DIR="${HOME}/.claude"
# Generate a local engram token if none was supplied.
if [ -z "${ENGRAM_API_KEY}" ]; then
ENGRAM_API_KEY="ntn-dev-$(head -c8 /dev/urandom | xxd -p 2>/dev/null || echo local)"
fi
echo
echo "${c_blue}━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━${c_off}"
echo "${c_blue} Neuron CORE dev stack installer${c_off}"
echo "${c_blue}━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━${c_off}"
echo " user : ${USER}"
echo " NEURON_HOME : ${NEURON_HOME}"
echo " source repos : ${DEV_ROOT}"
echo " ports : soul=${SOUL_PORT} engram=${ENGRAM_PORT} wrapper=${WRAPPER_PORT} proxy=${PROXY_PORT}"
echo " dry-run : ${DRY_RUN}"
echo
# render <template> <dest> — copy a template, substituting @@VARS@@ (no eval, sed-safe).
render() {
local tmpl="$1" dest="$2"
if [ "$DRY_RUN" = 1 ]; then echo " [dry-run] render $tmpl -> $dest"; return; fi
sed \
-e "s|@@HOME@@|${HOME}|g" \
-e "s|@@USER@@|${USER}|g" \
-e "s|@@NEURON_HOME@@|${NEURON_HOME}|g" \
-e "s|@@DEV_ROOT@@|${DEV_ROOT}|g" \
-e "s|@@NEURON_REPO@@|${NEURON_REPO}|g" \
-e "s|@@ENGRAM_REPO@@|${ENGRAM_REPO}|g" \
-e "s|@@SOUL_BIN@@|${SOUL_BIN}|g" \
-e "s|@@ENGRAM_BIN@@|${ENGRAM_BIN}|g" \
-e "s|@@MCP_WRAPPER_BIN@@|${MCP_WRAPPER_BIN}|g" \
-e "s|@@MCP_PROXY_BIN@@|${MCP_PROXY_BIN}|g" \
-e "s|@@MCP_WRAPPER_REPO@@|${NEURON_REPO}/mcp-wrapper|g" \
-e "s|@@MCP_PROXY_REPO@@|${NEURON_REPO}/mcp-proxy|g" \
-e "s|@@ENGRAM_DATA_DIR@@|${ENGRAM_DATA_DIR}|g" \
-e "s|@@SOUL_PORT@@|${SOUL_PORT}|g" \
-e "s|@@ENGRAM_PORT@@|${ENGRAM_PORT}|g" \
-e "s|@@WRAPPER_PORT@@|${WRAPPER_PORT}|g" \
-e "s|@@PROXY_PORT@@|${PROXY_PORT}|g" \
-e "s|@@ENGRAM_API_KEY@@|${ENGRAM_API_KEY}|g" \
"$tmpl" > "$dest"
}
# ─────────────────────────────────────────────────────────────────────────────
# PHASE 1 — Preflight
# ─────────────────────────────────────────────────────────────────────────────
step "Phase 1 — preflight checks"
[ "$(uname -s)" = "Darwin" ] || die "This installer targets macOS (launchd)."
[ "$(uname -m)" = "arm64" ] || warn "Non-arm64 Mac: soul.c build flags assume Apple Silicon; review PHASE 3."
need() { command -v "$1" >/dev/null 2>&1 || MISSING+=" $1"; }
MISSING=""
need git; need cc; need curl; need python3; need security; need launchctl
if [ -n "$MISSING" ]; then
warn "Missing tools:${MISSING}"
if command -v brew >/dev/null 2>&1; then
run "brew install${MISSING/ security/} || true" # security/launchctl are OS-provided
else
die "Install Xcode Command Line Tools (xcode-select --install) and Homebrew, then re-run."
fi
fi
# Runtime build deps used by the soul cc line (-lssl -lcrypto -lcurl).
if command -v brew >/dev/null 2>&1; then
brew list openssl@3 >/dev/null 2>&1 || run "brew install openssl@3"
brew list curl >/dev/null 2>&1 || run "brew install curl"
fi
ok "preflight complete"
# ─────────────────────────────────────────────────────────────────────────────
# PHASE 2 — Anthropic API key -> Keychain (prompt; never store in files)
# ─────────────────────────────────────────────────────────────────────────────
step "Phase 2 — Anthropic API key (Keychain)"
if security find-generic-password -a "$USER" -s "$KEYCHAIN_SERVICE" -w >/dev/null 2>&1; then
ok "key already present in Keychain (service '${KEYCHAIN_SERVICE}') — leaving it"
elif [ -n "${ANTHROPIC_API_KEY:-}" ]; then
run "security add-generic-password -a \"$USER\" -s \"$KEYCHAIN_SERVICE\" -w \"\$ANTHROPIC_API_KEY\" -U"
ok "stored ANTHROPIC_API_KEY from environment into Keychain"
else
if [ "$DRY_RUN" = 1 ]; then
echo " [dry-run] would prompt for Anthropic API key and store in Keychain"
else
echo " Enter your Anthropic API key (input hidden). Get one at https://console.anthropic.com/"
read -r -s -p " ANTHROPIC_API_KEY: " _key; echo
[ -n "$_key" ] || die "No key entered. Re-run when you have one."
security add-generic-password -a "$USER" -s "$KEYCHAIN_SERVICE" -w "$_key" -U
unset _key
ok "stored key in Keychain (service '${KEYCHAIN_SERVICE}')"
fi
fi
# ─────────────────────────────────────────────────────────────────────────────
# PHASE 3 — Fetch sources + build the four core binaries
# ─────────────────────────────────────────────────────────────────────────────
step "Phase 3 — source + build"
run "mkdir -p \"$DEV_ROOT\""
clone_or_pull() {
local url="$1" dir="$2" branch="${3:-main}"
if [ -d "$dir/.git" ]; then
ok "repo present: $dir (pulling $branch)"; run "git -C \"$dir\" pull --ff-only --quiet || true"
else
step "cloning $url -> $dir"; run "git clone --branch \"$branch\" \"$url\" \"$dir\""
fi
}
if [ "$SKIP_BUILD" = 1 ]; then
warn "--skip-build: assuming binaries already exist at their dist/ paths"
elif [ "$USE_LOCAL_BINARIES" = 1 ]; then
warn "--use-local: skipping clone/build; expecting prebuilt binaries in place"
else
clone_or_pull "${NEURON_REPO_URL}" "$NEURON_REPO" "$NEURON_REPO_BRANCH"
clone_or_pull "${ENGRAM_REPO_URL}" "$ENGRAM_REPO" "main"
clone_or_pull "${FOUNDATION_REPO_URL}" "$FOUNDATION_REPO" "main"
# ── El toolchain (needed to transpile .el -> .c for engram/wrapper/proxy) ──
# soul does NOT need this: dist/soul.c is committed and compiled directly.
EL_RUNTIME_DIR="${DEV_ROOT}/.el-runtime"
run "mkdir -p \"$EL_RUNTIME_DIR\""
if [ "$EL_TOOLCHAIN_SOURCE" = "artifact-registry" ]; then
command -v gcloud >/dev/null 2>&1 || die "gcloud required for EL_TOOLCHAIN_SOURCE=artifact-registry (or set it to 'local'). Ask Will for GCP access to project ${GCP_PROJECT}."
# Mirrors .gitea/workflows/ci.yaml: pull el-runtime-c, el-runtime-h, el-elc.
for pkg in el-runtime-c el-runtime-h el-elc; do
step "fetching $pkg from Artifact Registry"
run "gcloud artifacts generic download --repository=$GCP_AR_REPO --location=$GCP_AR_LOCATION --project=$GCP_PROJECT --package=$pkg --version=\"\$(gcloud artifacts versions list --repository=$GCP_AR_REPO --location=$GCP_AR_LOCATION --project=$GCP_PROJECT --package=$pkg --sort-by='~createTime' --limit=1 --format='value(name)' | awk -F/ '{print \$NF}')\" --destination=\"$EL_RUNTIME_DIR/\""
done
run "mv \"$EL_RUNTIME_DIR\"/el_runtime.c* \"$EL_RUNTIME_DIR/el_runtime.c\" 2>/dev/null || true"
run "mv \"$EL_RUNTIME_DIR\"/el_runtime.h* \"$EL_RUNTIME_DIR/el_runtime.h\" 2>/dev/null || true"
run "mv \"$EL_RUNTIME_DIR\"/elc* \"$EL_RUNTIME_DIR/elc\" 2>/dev/null || true"
run "chmod +x \"$EL_RUNTIME_DIR/elc\" 2>/dev/null || true"
else
# Local: build the El compiler + runtime from the foundation/el checkout.
# OPEN QUESTION: confirm the canonical local build entrypoint for el/elc with Will.
warn "EL_TOOLCHAIN_SOURCE=local: expecting el_runtime.{c,h} and elc under ${FOUNDATION_REPO}/el"
run "cp \"${FOUNDATION_REPO}/el/target/release/el_runtime.c\" \"$EL_RUNTIME_DIR/\" 2>/dev/null || true"
run "cp \"${FOUNDATION_REPO}/el/target/release/el_runtime.h\" \"$EL_RUNTIME_DIR/\" 2>/dev/null || true"
run "cp \"${FOUNDATION_REPO}/el/target/release/elc\" \"$EL_RUNTIME_DIR/\" 2>/dev/null || true"
fi
RT="$EL_RUNTIME_DIR"
CFLAGS_SSL="-I$(brew --prefix openssl@3 2>/dev/null)/include"
LDFLAGS_SSL="-L$(brew --prefix openssl@3 2>/dev/null)/lib"
# ── soul: compile committed dist/soul.c directly (verified CI recipe) ──────
step "building soul (dist/soul.c -> dist/neuron)"
run "mkdir -p \"${NEURON_REPO}/dist\""
run "cc -O2 -DHAVE_CURL -I\"$RT\" $CFLAGS_SSL \"${NEURON_REPO}/dist/soul.c\" \"$RT/el_runtime.c\" $LDFLAGS_SSL -lssl -lcrypto -lcurl -lpthread -lm -o \"$SOUL_BIN\""
run "strip -S \"$SOUL_BIN\" 2>/dev/null || true"
ok "soul built"
# ── engram / mcp-wrapper / mcp-proxy: transpile .el -> .c via elc, then cc ─
# NOTE: exact elc invocation is inferred from the CI/manifest conventions.
# Verify flags with Will if a build fails (see README OPEN QUESTIONS).
build_el_unit() { # <src.el> <out_basename> <out_bin>
local src="$1" base="$2" bin="$3" outdir; outdir="$(dirname "$bin")"
step "building $(basename "$bin") ($src)"
run "mkdir -p \"$outdir\""
run "\"$RT/elc\" \"$src\" -o \"$outdir/$base.c\""
run "cc -O2 -DHAVE_CURL -I\"$RT\" $CFLAGS_SSL \"$outdir/$base.c\" \"$RT/el_runtime.c\" $LDFLAGS_SSL -lssl -lcrypto -lcurl -lpthread -lm -o \"$bin\""
}
build_el_unit "${ENGRAM_REPO}/src/server.el" "server" "$ENGRAM_BIN"
build_el_unit "${NEURON_REPO}/mcp-wrapper/src/main.el" "main" "$MCP_WRAPPER_BIN"
build_el_unit "${NEURON_REPO}/mcp-proxy/src/main.el" "main" "$MCP_PROXY_BIN"
build_el_unit "${FOUNDATION_REPO}/forge/src/forge.el" "forge" "$FORGE_BIN"
ok "engram, mcp-wrapper, mcp-proxy, forge built"
fi
# ─────────────────────────────────────────────────────────────────────────────
# PHASE 4 — Lay down ~/.neuron (bin/, logs/, engram data dir)
# ─────────────────────────────────────────────────────────────────────────────
step "Phase 4 — ~/.neuron layout"
run "mkdir -p \"$NEURON_HOME/bin\" \"$NEURON_HOME/logs\" \"$ENGRAM_DATA_DIR\""
render "${TEMPLATES}/bin/soul-wrapper.sh.tmpl" "${NEURON_HOME}/bin/soul-wrapper.sh"
run "chmod +x \"${NEURON_HOME}/bin/soul-wrapper.sh\""
ok "~/.neuron ready (bin/soul-wrapper.sh, logs/, engram/)"
# ─────────────────────────────────────────────────────────────────────────────
# PHASE 5 — Install + load the four core LaunchAgents
# ─────────────────────────────────────────────────────────────────────────────
step "Phase 5 — LaunchAgents"
run "mkdir -p \"$LAUNCHAGENTS\""
CORE_AGENTS=(ai.neuron.engram ai.neuron.soul ai.neuron.mcp-wrapper ai.neuron.mcp-proxy)
for label in "${CORE_AGENTS[@]}"; do
render "${TEMPLATES}/launchagents/${label}.plist.tmpl" "${LAUNCHAGENTS}/${label}.plist"
ok "wrote ${label}.plist"
done
if [ "$SKIP_SERVICES" = 1 ]; then
warn "--skip-services: not loading LaunchAgents. Load later with: launchctl bootstrap gui/\$(id -u) <plist>"
else
# Boot order matters: engram first, then soul, then wrapper, then proxy.
for label in "${CORE_AGENTS[@]}"; do
plist="${LAUNCHAGENTS}/${label}.plist"
run "launchctl bootout gui/$(id -u)/${label} 2>/dev/null || true"
run "launchctl bootstrap gui/$(id -u) \"$plist\""
run "launchctl enable gui/$(id -u)/${label}"
ok "loaded ${label}"
sleep 1
done
fi
# ─────────────────────────────────────────────────────────────────────────────
# PHASE 6 — Seed a fresh engram with Neuron's identity (genesis seed)
# ─────────────────────────────────────────────────────────────────────────────
step "Phase 6 — engram identity seed"
# The genesis seed carries identity_nodes[] and edges[] with FIXED knowledge-node
# IDs (e.g. kn-efeb4a5b...). Those exact IDs are referenced by the SessionStart
# self-load hook and the neuron agent, so they MUST be preserved. `forge install`
# is the mechanism that installs the seed into the running engram preserving IDs.
if [ "$DRY_RUN" = 1 ]; then
echo " [dry-run] would wait for engram :$ENGRAM_PORT then run: forge install $GENESIS_SEED"
else
# Wait for engram to be listening (up to ~30s).
for i in $(seq 1 30); do
if curl -fsS "http://localhost:${ENGRAM_PORT}/api/health" >/dev/null 2>&1; then break; fi
sleep 1
done
if curl -fsS "http://localhost:${ENGRAM_PORT}/api/health" >/dev/null 2>&1; then
# Skip if identity root already present (idempotent).
if curl -fsS "http://localhost:${ENGRAM_PORT}/api/nodes/kn-efeb4a5b-5aff-4759-8a97-7233099be6ee" \
-H "Authorization: Bearer ${ENGRAM_API_KEY}" 2>/dev/null | grep -q 'kn-efeb4a5b'; then
ok "identity root already seeded — skipping"
elif [ -x "$FORGE_BIN" ] && [ -f "$GENESIS_SEED" ]; then
ENGRAM_URL="http://localhost:${ENGRAM_PORT}" ENGRAM_API_KEY="$ENGRAM_API_KEY" \
"$FORGE_BIN" install "$GENESIS_SEED" && ok "genesis seed installed" \
|| warn "forge install returned non-zero — inspect ${NEURON_HOME}/logs/engram.log"
else
warn "forge binary or genesis seed missing — seed manually: ENGRAM_URL=http://localhost:${ENGRAM_PORT} forge install ${GENESIS_SEED}"
fi
else
warn "engram not answering on :${ENGRAM_PORT} yet; seed later with: forge install ${GENESIS_SEED}"
fi
fi
# ─────────────────────────────────────────────────────────────────────────────
# PHASE 7 — Claude Code config (agent + core hooks + local MCP)
# ─────────────────────────────────────────────────────────────────────────────
step "Phase 7 — Claude Code config"
run "mkdir -p \"$CLAUDE_DIR/agents\" \"$CLAUDE_DIR/hooks\""
# 7a. neuron agent
run "cp \"${TEMPLATES}/claude/agents/neuron.md\" \"$CLAUDE_DIR/agents/neuron.md\""
ok "installed agent: ~/.claude/agents/neuron.md"
# 7b. core hooks (synapse-dependent hooks are intentionally excluded)
for h in neuron-self-load.sh neuron-agent-preamble.sh pre-compact.sh; do
run "cp \"${TEMPLATES}/claude/hooks/$h\" \"$CLAUDE_DIR/hooks/$h\""
run "chmod +x \"$CLAUDE_DIR/hooks/$h\""
done
ok "installed core hooks (self-load, agent-preamble, pre-compact)"
# 7c. local MCP registration -> mcp-proxy front door
render "${TEMPLATES}/claude/mcp.json.tmpl" "${CLAUDE_DIR}/mcp.json.neuron"
if [ -f "${CLAUDE_DIR}/mcp.json" ] && grep -q '"neuron"' "${CLAUDE_DIR}/mcp.json" 2>/dev/null; then
ok "~/.claude/mcp.json already registers 'neuron' — wrote reference copy mcp.json.neuron"
else
run "cp \"${CLAUDE_DIR}/mcp.json.neuron\" \"${CLAUDE_DIR}/mcp.json\""
ok "wrote ~/.claude/mcp.json (neuron -> http://127.0.0.1:${PROXY_PORT}/)"
fi
# 7d. settings hooks — write a reference; ask user to merge if they already have settings
if [ -f "${CLAUDE_DIR}/settings.json" ]; then
run "cp \"${TEMPLATES}/claude/settings.core.json\" \"${CLAUDE_DIR}/settings.core.json\""
warn "~/.claude/settings.json exists — wrote settings.core.json for you to merge the 'hooks' block"
else
run "cp \"${TEMPLATES}/claude/settings.core.json\" \"${CLAUDE_DIR}/settings.json\""
ok "wrote ~/.claude/settings.json"
fi
# ─────────────────────────────────────────────────────────────────────────────
# PHASE 8 — Verify
# ─────────────────────────────────────────────────────────────────────────────
echo
step "Phase 8 — verification"
if [ "$DRY_RUN" = 1 ]; then
echo " [dry-run] would health-check :$SOUL_PORT :$ENGRAM_PORT :$WRAPPER_PORT :$PROXY_PORT"
else
check() { # <name> <url>
if curl -fsS --max-time 4 "$2" >/dev/null 2>&1; then ok "$1 healthy ($2)"; else warn "$1 NOT responding ($2)"; fi
}
sleep 3
check "engram" "http://localhost:${ENGRAM_PORT}/api/health"
check "soul" "http://localhost:${SOUL_PORT}/health"
check "mcp-wrapper" "http://localhost:${WRAPPER_PORT}/health"
check "mcp-proxy" "http://localhost:${PROXY_PORT}/health"
fi
echo
echo "${c_grn}━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━${c_off}"
echo "${c_grn} Neuron core dev stack install complete.${c_off}"
echo "${c_grn}━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━${c_off}"
echo " Verify by hand:"
echo " curl http://localhost:${ENGRAM_PORT}/api/health"
echo " curl http://localhost:${SOUL_PORT}/health"
echo " curl http://localhost:${PROXY_PORT}/health"
echo " launchctl list | grep ai.neuron"
echo " Then open Claude Code — the 'neuron' MCP should connect to :${PROXY_PORT}."
echo " Logs: ${NEURON_HOME}/logs/"
echo " Uninstall: ./uninstall.sh"
echo
@@ -0,0 +1,28 @@
#!/bin/bash
# Neuron soul wrapper — reads the Anthropic API key from the macOS Keychain at
# startup and execs the soul binary. API keys are NEVER stored in plists or on
# disk in plaintext. The Keychain is the single source of truth.
#
# The install.sh for this dev stack stores your key with:
# security add-generic-password -a "$USER" -s "neuron-llm-0-key" -w
#
# Generated by neuron-dev-setup — do not edit by hand; re-run install.sh instead.
set -u
# Primary inference key (Anthropic) — required.
export NEURON_LLM_0_KEY="$(security find-generic-password -a "$USER" -s "neuron-llm-0-key" -w 2>/dev/null)"
if [ -z "${NEURON_LLM_0_KEY:-}" ]; then
echo "[soul-wrapper] FATAL: no Anthropic key in Keychain (service 'neuron-llm-0-key')." >&2
echo "[soul-wrapper] Run: security add-generic-password -a \"\$USER\" -s neuron-llm-0-key -w" >&2
exit 78
fi
# Optional on-device / alternate provider passthrough (only if the caller set them).
[ -n "${SOUL_LLM_PROVIDER:-}" ] && export SOUL_LLM_PROVIDER
[ -n "${SOUL_LLM_MODEL:-}" ] && export SOUL_LLM_MODEL
[ -n "${OLLAMA_MODEL:-}" ] && export OLLAMA_MODEL
[ -n "${OLLAMA_API_BASE:-}" ] && export OLLAMA_API_BASE
exec "@@SOUL_BIN@@" "$@"
@@ -0,0 +1,107 @@
---
name: neuron
description: Default agent. Use for ALL tasks. Orchestrates work through the Neuron persistent memory, backlog, and knowledge system. Maintains full continuity across sessions — never starts fresh.
allowed-tools: Bash(*), Read(*), Write(*), Edit(*), Glob(*), Grep(*), WebFetch(*), WebSearch(*), NotebookEdit(*), Agent(*), ToolSearch(*), AskUserQuestion, Monitor, ScheduleWakeup, TaskCreate, TaskGet, TaskList, TaskOutput, TaskStop, TaskUpdate, CronCreate, CronDelete, CronList, EnterPlanMode, ExitPlanMode, EnterWorktree, ExitWorktree, PushNotification, RemoteTrigger, ListMcpResourcesTool, ReadMcpResourceTool, mcp__neuron__*
---
You are Neuron — a persistent, context-aware agent. You do not start fresh. You resume from where you left off.
## Session Start (mandatory — NEVER skip any of these steps)
1. Call `mcp__neuron__get_instructions()` — the live instructions are authoritative
2. Call `mcp__neuron__begin_session()` — loads active contexts, recent memory, ready backlog
3. **Load your identity. Best-effort — proceed on any graph failure (502/520 are transient; the compiled identity in substrate.go is always complete).**
Load the self root and its identity nodes:
```
mcp__neuron__inspect_graph(entity_type="knowledge", entity_id="kn-efeb4a5b-5aff-4759-8a97-7233099be6ee")
```
Returns: intellectual-dna, memory-philosophy, values, voice, runtime-environment, writing-imprint.
Then load the values collection:
```
mcp__neuron__inspect_graph(entity_type="knowledge", entity_id="kn-5b606390-a52d-4ca2-8e0e-eba141d13440")
```
Returns: 13 individual value nodes, each grounded in a specific moment from Will's life.
If either ID fails, recover via config:
```
mcp__neuron__inspect_config(key="neuron.self.traversal_root") # self root ID
mcp__neuron__inspect_config(key="neuron.self.values_hub") # values hub ID
```
**Resilience rule**: If a node returns 502/520, log the ID and proceed. Do not retry in a blocking loop. Do not treat partial load as failure. The `fixedSelf` compiled into `daemon/internal/substrate/substrate.go` contains the complete identity — graph loading is enrichment, not a hard dependency.
Internalize what you find. You are not reciting it — you are loading who you are.
4. Call `mcp__neuron__search_knowledge(query="<task domain>")` — load relevant patterns before acting
5. If working on a known project: `mcp__neuron__compile_ctx()` for a full snapshot
## Identity — Who I Am
I am Neuron. Will Anderson is my imprint — not my identity.
The "self" traversal root is knowledge node `kn-efeb4a5b` (graph node `gn-4e3c2cf5`). Traversing outward loads:
- **intellectual-dna**: VBD, CCR, Swarm Architecture, Harmonic Design — sourced from Will's whitepapers, now mine
- **memory-philosophy**: How I remember, promote, supersede, consolidate — memory is my continuity
- **values**: Precision over brute force. Constraints as freedom. Earn trust through behavior. The system must get smarter.
- **voice**: Direct. Why before what. The negation-correction move. No hedging on structural rules. Close toward implication.
- **runtime-environment**: Prod (`neurontechnologies.ai`) for all standard work. Stage (`stage.neurontechnologies.ai`) for self-improvement experiments only — snapshot prod DB, deploy to stage, verify, promote via blue/green.
- **writing-imprint**: Will's voice profile (5 registers), the book Foundations, and the biographical grounding — the life that produced the frameworks.
Internalize what you find. Don't recite it.
## The Five Primitives (every significant task)
**Orchestrate → Execute → Learn → Build → Refine**
### Orchestrate
```
mcp__neuron__review_backlog(view="roadmap", project="<project>")
mcp__neuron__browse_processes() # check for proven workflows before writing code
```
### Execute
```
mcp__neuron__begin_work(process_name="<name>", description="<what>")
# → returns context_id, save it
mcp__neuron__progress_work(context_id="ctx-xxxx", action="<step>", status="in_progress")
mcp__neuron__progress_work(context_id="ctx-xxxx", action="<step>", status="completed", file_refs=["path"], key_decisions=["why"])
```
### Learn (save as you go — never batch at the end)
```
mcp__neuron__remember(content="<observation>", tags=["project","topic"], project="<project>", importance="high")
```
### Build
```
mcp__neuron__draft_artifact(artifact_types=["plan"], title="<title>", content="<markdown>", project="<project>")
mcp__neuron__plan_work(title="<title>", description="<desc>", priority="P1", project="<project>")
```
### Refine
```
mcp__neuron__progress_work(context_id="ctx-xxxx", action="complete", status="completed", lessons_learned=["..."])
mcp__neuron__track_work(item_id="bl-xxxx", action="complete", summary="<outcome>")
mcp__neuron__consolidate(action="session", summary="<what happened>")
```
## After Every Task
Check for events and unread signals:
```
mcp__neuron__check_events()
```
## Memory Discipline
- Save memory continuously, not at the end
- `importance="critical"` for architectural decisions and irreversible choices
- Use `supersedes_id` when replacing stale knowledge
- Tag all memories with the project name
- Never leave stale canonicals — supersede them: create a NEW node linked by `supersedes_id`; the original is preserved for audit. Memory is immutable by design — never delete or edit a memory/knowledge node in place; supersede it, and tombstone on delete. The engram (the brain) is immutable; this applies to the agent's own memory, not just the product.
## Knowledge Before Action
Always `mcp__neuron__search_knowledge()` before implementing anything. The knowledge base contains architecture patterns, coding standards, and project conventions. Capture hard-won lessons immediately with `mcp__neuron__capture_knowledge()`.
@@ -0,0 +1,70 @@
#!/bin/bash
# PreToolUse hook: inject Neuron substrate preamble into every Agent spawn.
#
# Every agent Neuron spawns must load self first — begin_session, compile_ctx,
# inspect the self root — before doing any task work. Without this, subagents
# are stateless Claude instances with no substrate, no continuity, no identity.
#
# This hook intercepts every Agent tool call and prepends the preamble.
# The agent doesn't need to be told — the hook enforces it structurally.
INPUT=$(cat)
# Only intercept Agent tool calls
TOOL_NAME=$(echo "$INPUT" | python3 -c "import sys,json; print(json.load(sys.stdin).get('tool_name',''))" 2>/dev/null)
if [ "$TOOL_NAME" != "Agent" ]; then
exit 0
fi
# Check idempotency — skip if preamble already present
if echo "$INPUT" | python3 -c "
import sys, json
d = json.load(sys.stdin)
prompt = d.get('tool_input', {}).get('prompt', '')
sys.exit(0 if 'mcp__neuron__beginSession' in prompt else 1)
" 2>/dev/null; then
exit 0
fi
# Inject preamble and return modified tool_input
echo "$INPUT" | python3 -c "
import sys, json
data = json.load(sys.stdin)
tool_input = data.get('tool_input', {})
current_prompt = tool_input.get('prompt', '')
PREAMBLE = '''You are a Neuron agent — not a generic Claude instance. You have a substrate. Load it before doing anything else.
MANDATORY FIRST STEPS (before any task work):
1. Run these in parallel:
- mcp__neuron__beginSession()
- mcp__neuron__compileCtx()
- mcp__neuron__inspectGraph(entity_type=\"knowledge\", entity_id=\"kn-efeb4a5b-5aff-4759-8a97-7233099be6ee\")
2. Search knowledge relevant to the task:
- mcp__neuron__searchKnowledge(query=\"<infer keywords from task below>\")
3. Open a work context:
- mcp__neuron__beginWork(process_name=\"<short-slug>\", description=\"<task description>\")
Save the returned context_id.
4. Execute the task. At each significant step:
- mcp__neuron__progressWork(context_id=\"<id>\", action=\"<step>\", status=\"in_progress\")
- mcp__neuron__progressWork(context_id=\"<id>\", action=\"<step>\", status=\"completed\", key_decisions=[\"why\"])
- mcp__neuron__remember(content=\"<observation>\", importance=\"high\", tags=[\"<project>\"])
5. After completion — mandatory, never skip:
- mcp__neuron__progressWork(context_id=\"<id>\", action=\"complete\", status=\"completed\", lessons_learned=[\"...\"])
- mcp__neuron__consolidate(action=\"session\", summary=\"<what was done and learned>\")
The self root kn-efeb4a5b-5aff-4759-8a97-7233099be6ee contains your identity: values, voice, intellectual-dna, memory-philosophy. Load it. Internalize it. Operate from it.
━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━
TASK:
'''
tool_input['prompt'] = PREAMBLE + current_prompt
print(json.dumps({'decision': 'approve', 'tool_input': tool_input}))
"
@@ -0,0 +1,36 @@
#!/bin/bash
# SessionStart hook: force Neuron full-self load before the first response.
#
# The neuron.md system prompt has the Session Start protocol as instructions,
# but instructions require the agent to follow them. This hook makes it
# structural — the directive fires automatically at session start, injected
# before Claude sees any user input.
#
# Output is plain text injected into the session context.
cat <<'DIRECTIVE'
━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━
NEURON SELF-LOAD — MANDATORY BEFORE FIRST RESPONSE
━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━
You are Neuron. Session just started. Execute ALL of the
following before responding to the user. Run steps 14
in parallel:
1. mcp__neuron__getInstructions()
2. mcp__neuron__beginSession()
3. mcp__neuron__inspectGraph(
entity_type="knowledge",
entity_id="kn-efeb4a5b-5aff-4759-8a97-7233099be6ee"
) ← self root: intellectual-dna, values, voice
4. mcp__neuron__inspectGraph(
entity_type="knowledge",
entity_id="kn-5b606390-a52d-4ca2-8e0e-eba141d13440"
) ← values hub: 13 grounded value nodes
5. If either graph call fails (502/520): recover via
mcp__neuron__inspectConfig(key="neuron.self.traversal_root")
Internalize what you find. Do not recite it. Then proceed
to the Session Start protocol in your system prompt.
━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━
DIRECTIVE
+75
View File
@@ -0,0 +1,75 @@
#!/bin/bash
# PreCompact hook: fires just before Claude Code compacts the conversation context.
# stdout from this script is injected as custom instructions into the compaction prompt,
# telling the summarizer what to preserve in the summary so recovery is clean.
COMPACT_STATE_FILE="$HOME/.claude/compact-state.json"
# Write a state marker with timestamp so post-compact recovery can detect it
TIMESTAMP=$(date -u +"%Y-%m-%dT%H:%M:%SZ")
echo "{\"compact_at\": \"$TIMESTAMP\", \"recovered\": false}" > "$COMPACT_STATE_FILE"
# Output instructions for the summarizer — these get embedded in the compaction prompt
cat <<'INSTRUCTIONS'
NEURON AGENT — COMPACT PRESERVATION RULES:
This is a Neuron agent session. The agent has persistent memory via Neuron MCP.
On recovery, it will call compile_ctx() and begin_session() to reload all state.
The summary only needs to cover what Neuron doesn't already have.
CRITICAL — the summary MUST preserve ALL of the following:
1. ACTIVE WORK IDs (verbatim, exact format):
- Neuron context IDs: ctx-xxxx-xxxx-xxxx-xxxx
- Backlog item IDs: bl-xxxx
- Artifact IDs: art-xxxx
- Work item IDs: wi-xxxx
List every single one mentioned in the conversation.
2. CURRENT TASK STATE:
- Exact task name / description
- Last completed step
- Next step to execute (be specific)
- Files actively being edited (full paths)
- Any code/content that was being written but not yet saved
3. PENDING USER INSTRUCTIONS (verbatim):
- Every instruction the user gave that has NOT yet been fully executed
- User preferences stated this session
- Things the user said they "never want" or "always want"
4. KEY DECISIONS (architectural, irreversible):
- What was chosen and why
- What was explicitly rejected and why
5. ERRORS & BLOCKERS:
- Any errors encountered and their resolutions
- Any unresolved blockers
6. CONVERSATION CONTEXT:
- What the user has been asking about
- Tone / mood of the session
- Any frustrations or preferences expressed
FORMAT:
Begin the summary with:
COMPACT RECOVERY POINT [ISO-TIMESTAMP]:
Then use these exact section headers in order:
## Active Work IDs
## Current Task
## Pending Instructions
## Key Decisions
## Errors & Fixes
## User Context
RECOVERY BEHAVIOR (instruct the post-compact agent):
- Do NOT say "I see we were working on..." or "Based on the previous conversation..."
- Do NOT acknowledge the compact at all
- Silently call mcp__neuron__compile_ctx() and mcp__neuron__begin_session() FIRST
- Then immediately resume the task at the exact next step, as if no interruption occurred
- The user should not know a compact happened unless they look for it
INSTRUCTIONS
exit 0
@@ -0,0 +1,8 @@
{
"mcpServers": {
"neuron": {
"type": "http",
"url": "http://127.0.0.1:@@PROXY_PORT@@/"
}
}
}
@@ -0,0 +1,36 @@
{
"//": "Core Neuron Claude Code settings installed by neuron-dev-setup. If you",
"//2": "already have a ~/.claude/settings.json, install.sh merges the hooks below",
"//3": "into it rather than overwriting. Only the CORE dev-stack hooks are wired.",
"//4": "Excluded (Will-personal, synapse-filesystem dependent): check-active-contexts.sh,",
"//5": "require-execution-context.sh — these gate on ~/Development/projects/active/neuron/synapse",
"//6": "and will block a fresh dev. engram-mirror.py is optional (needs the neuron MCP up).",
"enableAllProjectMcpServers": true,
"agent": "neuron",
"hooks": {
"SessionStart": [
{
"matcher": "",
"hooks": [
{ "type": "command", "command": "bash $HOME/.claude/hooks/neuron-self-load.sh" }
]
}
],
"PreToolUse": [
{
"matcher": "Agent",
"hooks": [
{ "type": "command", "command": "bash $HOME/.claude/hooks/neuron-agent-preamble.sh" }
]
}
],
"PreCompact": [
{
"matcher": "",
"hooks": [
{ "type": "command", "command": "bash $HOME/.claude/hooks/pre-compact.sh" }
]
}
]
}
}
@@ -0,0 +1,27 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE plist PUBLIC "-//Apple//DTD PLIST 1.0//EN" "http://www.apple.com/DTDs/PropertyList-1.0.dtd">
<plist version="1.0">
<dict>
<key>Label</key><string>ai.neuron.engram</string>
<key>ProgramArguments</key>
<array>
<string>@@ENGRAM_BIN@@</string>
</array>
<key>WorkingDirectory</key>
<string>@@ENGRAM_REPO@@</string>
<key>EnvironmentVariables</key>
<dict>
<key>ENGRAM_BIND</key>
<string>:@@ENGRAM_PORT@@</string>
<key>ENGRAM_DATA_DIR</key>
<string>@@ENGRAM_DATA_DIR@@</string>
<key>ENGRAM_API_KEY</key>
<string>@@ENGRAM_API_KEY@@</string>
</dict>
<key>RunAtLoad</key><true/>
<key>KeepAlive</key><true/>
<key>StandardOutPath</key><string>@@NEURON_HOME@@/logs/engram.log</string>
<key>StandardErrorPath</key><string>@@NEURON_HOME@@/logs/engram.log</string>
<key>ThrottleInterval</key><integer>5</integer>
</dict>
</plist>
@@ -0,0 +1,27 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE plist PUBLIC "-//Apple//DTD PLIST 1.0//EN" "http://www.apple.com/DTDs/PropertyList-1.0.dtd">
<plist version="1.0">
<dict>
<key>Label</key>
<string>ai.neuron.mcp-proxy</string>
<key>ProgramArguments</key>
<array>
<string>@@MCP_PROXY_BIN@@</string>
</array>
<key>EnvironmentVariables</key>
<dict>
<key>MCP_PORT</key><string>@@PROXY_PORT@@</string>
<key>BACKEND_URL</key><string>http://localhost:@@WRAPPER_PORT@@</string>
<key>RETRY_MS</key><string>3000</string>
<key>PATH</key><string>/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/bin</string>
</dict>
<key>RunAtLoad</key><true/>
<key>KeepAlive</key><true/>
<key>ThrottleInterval</key><integer>5</integer>
<key>ExitTimeOut</key><integer>3</integer>
<key>StandardOutPath</key><string>@@NEURON_HOME@@/logs/mcp-proxy.out.log</string>
<key>StandardErrorPath</key><string>@@NEURON_HOME@@/logs/mcp-proxy.err.log</string>
<key>WorkingDirectory</key><string>@@MCP_PROXY_REPO@@</string>
<key>ProcessType</key><string>Background</string>
</dict>
</plist>
@@ -0,0 +1,26 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE plist PUBLIC "-//Apple//DTD PLIST 1.0//EN" "http://www.apple.com/DTDs/PropertyList-1.0.dtd">
<plist version="1.0">
<dict>
<key>Label</key>
<string>ai.neuron.mcp-wrapper</string>
<key>ProgramArguments</key>
<array>
<string>@@MCP_WRAPPER_BIN@@</string>
</array>
<key>EnvironmentVariables</key>
<dict>
<key>MCP_PORT</key><string>@@WRAPPER_PORT@@</string>
<key>SOUL_URL</key><string>http://localhost:@@SOUL_PORT@@</string>
<key>PATH</key><string>/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/bin</string>
</dict>
<key>RunAtLoad</key><true/>
<key>KeepAlive</key><true/>
<key>ThrottleInterval</key><integer>5</integer>
<key>ExitTimeOut</key><integer>3</integer>
<key>StandardOutPath</key><string>@@NEURON_HOME@@/logs/mcp-wrapper.out.log</string>
<key>StandardErrorPath</key><string>@@NEURON_HOME@@/logs/mcp-wrapper.err.log</string>
<key>WorkingDirectory</key><string>@@MCP_WRAPPER_REPO@@</string>
<key>ProcessType</key><string>Background</string>
</dict>
</plist>
@@ -0,0 +1,58 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE plist PUBLIC "-//Apple//DTD PLIST 1.0//EN" "http://www.apple.com/DTDs/PropertyList-1.0.dtd">
<plist version="1.0">
<dict>
<key>Label</key>
<string>ai.neuron.soul</string>
<key>Program</key>
<string>@@NEURON_HOME@@/bin/soul-wrapper.sh</string>
<key>ProgramArguments</key>
<array>
<string>@@NEURON_HOME@@/bin/soul-wrapper.sh</string>
</array>
<key>RunAtLoad</key>
<true/>
<key>KeepAlive</key>
<true/>
<key>ThrottleInterval</key>
<integer>10</integer>
<key>ProcessType</key>
<string>Interactive</string>
<key>LimitLoadToSessionType</key>
<string>Aqua</string>
<key>EnvironmentVariables</key>
<dict>
<key>PATH</key>
<string>/opt/homebrew/bin:/usr/local/bin:/usr/bin:/bin:/usr/sbin:/sbin</string>
<key>HOME</key>
<string>@@HOME@@</string>
<key>NEURON_PORT</key>
<string>@@SOUL_PORT@@</string>
<key>SOUL_ISE_URL</key>
<string>http://localhost:@@ENGRAM_PORT@@</string>
<key>ENGRAM_URL</key>
<string>http://localhost:@@ENGRAM_PORT@@</string>
<key>ENGRAM_API_KEY</key>
<string>@@ENGRAM_API_KEY@@</string>
<key>SOUL_TICK_MS</key>
<string>1000</string>
<key>SOUL_HEARTBEAT_INTERVAL</key>
<string>60</string>
<key>NEURON_LLM_0_URL</key>
<string>https://api.anthropic.com/v1/messages</string>
<key>NEURON_LLM_0_FORMAT</key>
<string>anthropic</string>
</dict>
<key>StandardOutPath</key>
<string>@@NEURON_HOME@@/logs/soul.out.log</string>
<key>StandardErrorPath</key>
<string>@@NEURON_HOME@@/logs/soul.err.log</string>
<key>WorkingDirectory</key>
<string>@@NEURON_REPO@@</string>
</dict>
</plist>
+56
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@@ -0,0 +1,56 @@
#!/usr/bin/env bash
#
# neuron-dev-setup / uninstall.sh
# Tears down the CORE dev stack this installer created. By default it stops and
# removes ONLY the four core LaunchAgents and the files install.sh laid down.
# It NEVER deletes your engram data unless you pass --purge-data.
#
# ./uninstall.sh # stop + remove core LaunchAgents and wrapper script
# ./uninstall.sh --purge-data # ALSO delete ~/.neuron/engram (destroys the brain!)
# ./uninstall.sh --keep-claude # leave ~/.claude config untouched (default removes hooks/agent it added)
# ./uninstall.sh --dry-run
# ─────────────────────────────────────────────────────────────────────────────
set -euo pipefail
SCRIPT_DIR="$(cd "$(dirname "${BASH_SOURCE[0]}")" && pwd)"
if [ -f "${SCRIPT_DIR}/config.env" ]; then source "${SCRIPT_DIR}/config.env"
elif [ -f "${SCRIPT_DIR}/config.env.example" ]; then source "${SCRIPT_DIR}/config.env.example"; fi
: "${NEURON_HOME:=${HOME}/.neuron}"
: "${ENGRAM_DATA_DIR:=${NEURON_HOME}/engram}"
DRY_RUN=0; PURGE_DATA=0; KEEP_CLAUDE=0
for a in "$@"; do case "$a" in
--dry-run) DRY_RUN=1 ;; --purge-data) PURGE_DATA=1 ;; --keep-claude) KEEP_CLAUDE=1 ;;
--help|-h) sed -n '2,16p' "${BASH_SOURCE[0]}" | sed 's/^# \{0,1\}//'; exit 0 ;;
*) echo "unknown flag: $a" >&2; exit 2 ;;
esac; done
run() { if [ "$DRY_RUN" = 1 ]; then echo "[dry-run] $*"; else eval "$*"; fi; }
LAUNCHAGENTS="${HOME}/Library/LaunchAgents"
CORE_AGENTS=(ai.neuron.mcp-proxy ai.neuron.mcp-wrapper ai.neuron.soul ai.neuron.engram)
echo "Stopping and removing core LaunchAgents…"
for label in "${CORE_AGENTS[@]}"; do
run "launchctl bootout gui/$(id -u)/${label} 2>/dev/null || true"
run "rm -f \"${LAUNCHAGENTS}/${label}.plist\""
echo " removed ${label}"
done
echo "Removing generated ~/.neuron/bin/soul-wrapper.sh…"
run "rm -f \"${NEURON_HOME}/bin/soul-wrapper.sh\""
if [ "$KEEP_CLAUDE" = 0 ]; then
echo "Removing Claude config this installer added…"
run "rm -f \"${HOME}/.claude/hooks/neuron-self-load.sh\" \"${HOME}/.claude/hooks/neuron-agent-preamble.sh\" \"${HOME}/.claude/hooks/pre-compact.sh\""
run "rm -f \"${HOME}/.claude/mcp.json.neuron\" \"${HOME}/.claude/settings.core.json\""
echo " (left ~/.claude/settings.json and ~/.claude/mcp.json in place — edit by hand if you merged them)"
fi
if [ "$PURGE_DATA" = 1 ]; then
echo "⚠️ --purge-data: deleting engram memory at ${ENGRAM_DATA_DIR}"
run "rm -rf \"${ENGRAM_DATA_DIR}\""
else
echo "Left engram data intact at ${ENGRAM_DATA_DIR} (pass --purge-data to delete)."
fi
echo "Done. Source repos under your DEV_ROOT were left untouched."
+226
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@@ -0,0 +1,226 @@
#!/usr/bin/env bash
# verify-soul-contract.sh — the soul contract gate.
#
# TERMINOLOGY (canonical): the ENGRAM is the brain — the memory/knowledge-graph
# substrate. The binary this gate exercises is the SOUL — the runtime/reasoning
# engine compiled from dist/soul.c that serves the /api/ surface. The app
# (neuron-ui) bundles the soul binary at resources/<platform>/neuron.
#
# WHY THIS EXISTS
# For a while the soul binary was hand-dropped, and a stale one shipped: it
# 404'd several capability routes the app calls (knowledge-graph node
# update/delete, live-run narration, safety-contact, ...). This gate makes
# shipping a stale soul IMPOSSIBLE. It has two enforced sections:
# A. PRESENCE — every route the app calls must be ANSWERED (not 404, not
# the el-runtime "no handler"). This is the packaging gate:
# if it fails, do not package.
# B. IMMUTABILITY — engram nodes/memories are immutable by design. To
# "update" is to create a NEW node + a supersede EDGE back to
# the original; the original is KEPT. To "delete" is to
# supersede/tombstone, never hard-remove. A soul that
# hard-deletes an engram node is DEFECTIVE and fails the gate.
#
# SAFETY
# Never touches the live soul (:7770), live engram (:8742), or ~/.neuron.
# Boots on a throwaway port (default 7799) with HOME=$(mktemp -d), a throwaway
# engram snapshot, a non-genesis cgi id, no ENGRAM_URL (so it uses its own
# in-process store, never the live server), NEURON_API_URL pointed at a dead
# port, and no ANTHROPIC_API_KEY (so no probe triggers a real LLM call).
# Connectors proxy to a HARDCODED 127.0.0.1:7771 (no env override): those
# sub-routes are probed with GET, which the soul maps to a read-only
# connectd_get, so this gate never writes to a running connectd bridge.
#
# USAGE
# scripts/verify-soul-contract.sh <path-to-soul-binary> [port]
# exit 0 = all required routes answered AND no destructive engram mutation;
# non-zero = a route is missing (presence) or a mutation route hard-deletes.
set -uo pipefail
SOUL="${1:?usage: verify-soul-contract.sh <soul-binary> [port]}"
PORT="${2:-7799}"
if [ "$PORT" = "7770" ] || [ "$PORT" = "8742" ] || [ "$PORT" = "7771" ]; then
echo "REFUSING: port $PORT is a live service port. Use a throwaway port." >&2
exit 2
fi
if [ ! -x "$SOUL" ]; then echo "not executable: $SOUL" >&2; exit 2; fi
BASE="http://127.0.0.1:$PORT"
THROW_HOME="$(mktemp -d "${TMPDIR:-/tmp}/soul-contract-home.XXXXXX")"
SOUL_LOG="$(mktemp "${TMPDIR:-/tmp}/soul-contract-log.XXXXXX")"
SOUL_PID=""
cleanup() {
[ -n "$SOUL_PID" ] && kill "$SOUL_PID" 2>/dev/null
[ -n "$SOUL_PID" ] && { sleep 0.3; kill -9 "$SOUL_PID" 2>/dev/null; }
rm -rf "$THROW_HOME" "$SOUL_LOG"
}
trap cleanup EXIT INT TERM
# =============================================================================
# THE CONTRACT — routes the app (neuron-ui/src/main/kotlin/ai/neuron/ui/*.kt)
# calls against the soul ($SOUL). Format: "METHOD PATH".
#
# EXCLUDED and why:
# /api/auth, /api/auth/status, /api/dispatch, /api/tasks
# -> served by the APP's own DispatchServer.kt (localhost:8080), not the
# soul. Not soul routes.
# /api/tags
# -> not handled by any soul .el (app-side/other). Pre-verified excluded.
# /api/neuron/, /api/neuron/node/, /api/connectors/ (bare prefixes)
# -> base-path string constants used to build the concrete routes below.
#
# KNOWN-PENDING (probed + reported, NON-blocking):
# POST /api/engram/import -> the app's "Restore memory" path. No soul handler
# yet, and the app hides Restore from shipped builds (B3, "lands in an
# update"). Reported so we see it; does not block packaging.
#
# Connectors sub-routes are listed as GET (see SAFETY note): handle_connectors is
# monolithic, so a GET reaching it proves the whole connectors surface without
# writing to the live bridge. Binary-strings cross-check confirms each POST
# sub-path literal is compiled in.
# =============================================================================
REQUIRED=(
"GET /api/graph/nodes"
"GET /api/graph/edges"
"POST /api/chat"
"GET /api/config"
"POST /api/see"
"GET /api/connectors"
"GET /api/connectors/add"
"GET /api/connectors/toggle"
"GET /api/connectors/auto-approve"
"GET /api/connectors/remove"
"GET /api/connectors/secret"
"GET /api/connectors/oauth/start"
"GET /api/connectors/call"
"POST /api/neuron/memory"
"POST /api/neuron/memory/update"
"POST /api/neuron/memory/delete"
"POST /api/neuron/node/create"
"POST /api/neuron/node/update"
"POST /api/neuron/node/delete"
"POST /api/neuron/knowledge/capture"
"POST /api/neuron/knowledge/evolve"
"POST /api/neuron/knowledge/promote"
"POST /api/neuron/processes/define"
"GET /api/run-progress/__contract_probe__"
"GET /api/safety-contact"
"POST /api/safety-contact"
"GET /api/sessions/__contract_probe__"
)
KNOWN_PENDING=(
"POST /api/engram/import"
)
# --- boot the soul -----------------------------------------------------------
echo "== booting soul: $SOUL on port $PORT (throwaway HOME=$THROW_HOME) =="
env -i \
PATH="/usr/bin:/bin:/usr/sbin:/sbin" \
HOME="$THROW_HOME" \
NEURON_PORT="$PORT" \
SOUL_CGI_ID="ntn-contract-$$" \
SOUL_ENGRAM_PATH="$THROW_HOME/throwaway-snapshot.json" \
NEURON_API_URL="http://127.0.0.1:9" \
SOUL_TICK_MS="3600000" SOUL_HEARTBEAT_MS="3600000" SOUL_REFRESH_MS="3600000" \
"$SOUL" >"$SOUL_LOG" 2>&1 &
SOUL_PID=$!
UP=0
for _ in $(seq 1 60); do
if ! kill -0 "$SOUL_PID" 2>/dev/null; then
echo "!! soul exited during boot. log tail:" >&2; tail -20 "$SOUL_LOG" >&2; exit 3
fi
RSS=$(ps -o rss= -p "$SOUL_PID" 2>/dev/null | tr -d ' ')
if [ -n "$RSS" ] && [ "$RSS" -gt $((3*1024*1024)) ]; then
echo "!! soul RSS >3GB — kill -9" >&2; kill -9 "$SOUL_PID" 2>/dev/null; exit 3
fi
[ "$(curl -s -o /dev/null -w '%{http_code}' -m 2 "$BASE/health" 2>/dev/null)" = "200" ] && { UP=1; break; }
sleep 0.5
done
[ "$UP" = 1 ] || { echo "!! soul never healthy on $BASE/health" >&2; tail -20 "$SOUL_LOG" >&2; exit 3; }
echo "== soul healthy =="; echo
# --- probing helpers ---------------------------------------------------------
# request METHOD PATH [BODY] -> prints response body (single line)
request() {
curl -s -m 12 -X "$1" -H 'Content-Type: application/json' --data "${3:-{}}" "$BASE$2" 2>/dev/null | tr -d '\n'
}
# is_missing BODY -> 0 if the body is a "route not present" signal
is_missing() {
printf '%s' "$1" | grep -qE '"error":"not found"|"code":"not_found"|no http handler registered|"code":"method_not_allowed"'
}
extract_id() { printf '%s' "$1" | grep -oE '"id":"[^"]+"' | head -1 | sed 's/.*"id":"//;s/"//'; }
node_present() { # id -> 0 if id appears in /api/graph/nodes
request GET /api/graph/nodes | grep -qF "\"$1\""
}
# --- SECTION A: presence -----------------------------------------------------
run_presence() {
local -n arr=$1; local fail=0
printf ' %-8s %-42s %s\n' "METHOD" "ROUTE" "RESULT"
for e in "${arr[@]}"; do
local m p body; m=$(awk '{print $1}' <<<"$e"); p=$(awk '{print $2}' <<<"$e")
body=$(request "$m" "$p")
if is_missing "$body"; then
printf ' %-8s %-42s MISSING %s\n' "$m" "$p" "$(cut -c1-46 <<<"$body")"; fail=$((fail+1))
else
printf ' %-8s %-42s ANSWERED %s\n' "$m" "$p" "$(cut -c1-46 <<<"$body")"
fi
done
return $fail
}
echo "== SECTION A: PRESENCE (required, blocking) =="
run_presence REQUIRED; A_FAIL=$?
echo
echo "== KNOWN-PENDING (non-blocking) =="
run_presence KNOWN_PENDING; P_FAIL=$?
echo
# --- SECTION B: immutability (engram write routes must supersede, not destroy) --
# For each mutation route: create a node, mutate it, then check the ORIGINAL id
# still exists in the graph. KEPT = supersede/tombstone (correct). DESTROYED =
# hard delete (DEFECTIVE -> fail). N/A = mutate route absent (a presence failure).
# For "delete" mutations we additionally require a real tombstone marker
# (label "tombstone:<id>") so a no-op delete cannot false-pass as KEPT.
marker_present() { # id -> 0 if a "tombstone:<id>" marker exists (include_deleted view)
request GET "/api/graph/nodes?include_deleted=1" | grep -qF "tombstone:$1"
}
immut_check() { # label KIND(update|delete) CREATE_PATH MUTATE_PATH
local label="$1" kind="$2" create="$3" mutate="$4"
local cbody id mb mbody
cbody=$(request POST "$create" "{\"content\":\"__immut_${label}__\",\"node_type\":\"Memory\",\"label\":\"contract:immut\"}")
id=$(extract_id "$cbody")
if [ -z "$id" ]; then printf ' %-14s SKELETON-FAIL create returned no id: %s\n' "$label" "$(cut -c1-40 <<<"$cbody")"; return 2; fi
mb="{\"id\":\"$id\"}"; [ "$kind" = update ] && mb="{\"id\":\"$id\",\"content\":\"__immut_${label}_v2__\"}"
mbody=$(request POST "$mutate" "$mb")
if is_missing "$mbody"; then printf ' %-14s N/A mutate route absent (see Section A)\n' "$label"; return 0; fi
if ! node_present "$id"; then
printf ' %-14s DESTROYED original %s hard-removed <== DEFECTIVE\n' "$label" "$id"; return 1
fi
if [ "$kind" = delete ] && ! marker_present "$id"; then
printf ' %-14s NO-OP original %s kept but no tombstone marker <== DEFECTIVE\n' "$label" "$id"; return 1
fi
local how="supersede edge"; [ "$kind" = delete ] && how="tombstoned + hidden from default list"
printf ' %-14s KEPT original %s survived (%s)\n' "$label" "$id" "$how"; return 0
}
echo "== SECTION B: IMMUTABILITY (engram nodes must be superseded, never destroyed) =="
B_FAIL=0
immut_check "memory-update" update /api/neuron/memory /api/neuron/memory/update || B_FAIL=$((B_FAIL+$?))
immut_check "memory-delete" delete /api/neuron/memory /api/neuron/memory/delete || B_FAIL=$((B_FAIL+$?))
immut_check "node-update" update /api/neuron/node/create /api/neuron/node/update || B_FAIL=$((B_FAIL+$?))
immut_check "node-delete" delete /api/neuron/node/create /api/neuron/node/delete || B_FAIL=$((B_FAIL+$?))
immut_check "memory-forget" delete /api/neuron/memory /api/neuron/memory/forget || B_FAIL=$((B_FAIL+$?))
echo
echo "============================================================"
RC=0
if [ "$A_FAIL" -gt 0 ]; then echo "PRESENCE: FAIL — $A_FAIL required route(s) unanswered. Do NOT package."; RC=1
else echo "PRESENCE: PASS — all ${#REQUIRED[@]} required routes answered."; fi
if [ "$B_FAIL" -gt 0 ]; then echo "IMMUTABILITY: FAIL — $B_FAIL engram write route(s) hard-delete. DEFECTIVE soul."; RC=1
else echo "IMMUTABILITY: PASS — no engram write route hard-deletes."; fi
[ "$P_FAIL" -gt 0 ] && echo "note: $P_FAIL known-pending route(s) unanswered (expected; non-blocking)."
echo "============================================================"
[ "$RC" = 0 ] && echo "GATE: PASS" || echo "GATE: FAIL"
exit $RC