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Author SHA1 Message Date
Tim Lingo 8f3a478771 fix(engine): excise the receipt, do not truncate at it — a leading receipt was erasing whole answers
CAUGHT BY A/B, AND ONLY BY A/B. The previous commit's receipt_strip assumed the receipt is
always TERMINAL and cut everything from the marker onward. It is not always terminal: once
receipt_rule told the model what [[RECEIPT ...]] means, the model sometimes LED with one and
wrote the answer underneath. Cutting at the marker then deleted the entire answer and the
turn returned {"error":"no response"}.

MEASURED, same prompt (two web searches, cited prose), fresh session each run:
    round-7 brain   4 / 4 answered   (471, 473, 473, 544 chars)
    round-8 brain   2 / 7 answered   (five {"error":"no response"})
This looked exactly like a flaky model. It was not — it was mine. Running the two brains
side by side on the same prompt is the only reason it was found, and it is the reason the
A/B is now part of how this class gets tested.

AFTER THE FIX, same protocol:
    round-7 brain   4 / 4   (473, 473, 473, 544)
    round-8 brain   4 / 4   (657, 657, 657, 673)

THE FIX: remove the [[...]] span and keep BOTH sides, instead of truncating at the marker.
An unterminated marker at position 0 is left completely alone — no rule about receipts is
worth erasing an answer over. Bounded four-pass loop rather than a conditional exit, because
rebinding the counter inside an if-expression is the block-expression shape that miscompiles
integer arithmetic under this elc (BUG-PLAINCHAT-1). Verified in the generated C:
    str_slice(rest, (e + 2), str_len(rest))   <- integer addition, correct
    el_str_concat(head, tail)                 <- string concat, correct
and zero el_str_concat(<ident>, str_len(...)) sites across all 49 modules.

SEAM PROOF (FIX C) rides on the same runs — a real two-search cited answer, inspected byte
by byte, in BOTH failure directions:
  missing separator (the round-7 "to.Good", bytes 77 2e 47): 0 hits. Sentence boundaries
    measure 2e 20 4d — "." SPACE "M".
  over-separation (a cited sentence shattered across paragraphs): 0 hits. The answer is one
    continuous paragraph with its sentences intact, which is the direction a blanket
    separator would have broken.

BUILT: sha256 77115f2733e794c5bc4ad1f55b1acaf658f8f4a91cccd423a2d633d94a726cbc

Refs neuron#109

Co-Authored-By: Claude Opus 5 <noreply@anthropic.com>
2026-08-05 23:25:48 -05:00
Tim Lingo 9ea41eed78 fix(engine): the model was signing its own answers with our receipt — strip it
FOUND BY E2E, NOT BY REASONING. The previous commit's design note asserted the provenance
receipt "never reaches the user: it is appended to the history copy, not the reply." That
was FALSE, and only running the thing showed it. On the first live run against the built
DMG brain, two agentic turns out of two came back with

  "Your favourite colour is chartreuse and your project is called Perihelion.

   [[RECEIPT - recorded by the soul, not written by the model: no tools ran on this turn.]]"

— the receipt in the user-visible reply.

MECHANISM: the receipt is stored inside the assistant turn, and the agentic path replays
history VERBATIM as Anthropic message objects. So the model sees its own previous answers
ending in [[RECEIPT ...]] and does the obvious thing — it imitates the format and signs the
next answer the same way. The plain path did NOT leak, which is the tell: there, history is
rendered into the SYSTEM prompt as labelled lines rather than replayed as assistant turns,
and a model imitates its own turns far more readily than a transcript.

FIX, two layers, because one of them is not a guarantee:
  - receipt_rule() names the marker in both system prompts (plain and agentic): these lines
    are written by the system, read them as evidence, never write one. Reduces occurrence.
  - receipt_strip() truncates any [[RECEIPT ...]] out of model output before it becomes the
    reply — plain path in layered_generate, agentic path on final_text in agentic_loop.
    Deterministic. A guard that depends on the model choosing to obey is exactly the class of
    thing round 8 exists to stop shipping, so the instruction is the optimisation and the
    strip is the guarantee.
Placed ABOVE agentic_loop's empty-check on purpose: a turn whose entire output was an
imitated receipt has produced no answer, and must be reported as no answer.

The receipt stays in HISTORY, which is the whole point and is proven to work: asked "What
source did you use for that?" one turn after a live web_search, this brain answered
"I used Weather Underground (https://www.wunderground.com/weather/is/reykjav%C3%ADk) for the
current temperature in Reykjavik" — a real source, no apology. That is the false confession
dead, and it is dead BECAUSE the model can read the receipt.

BUILT: 887,112 bytes, sha256 54a2eff84d4fa44f8d2db6781dcf225df4b5075a8ec5f1058018bd40cc1af10b
BUG-PLAINCHAT-1 miscompile guard: zero sites.

Refs neuron#109

Co-Authored-By: Claude Opus 5 <noreply@anthropic.com>
2026-08-05 23:10:53 -05:00
Tim Lingo ff421d39f6 fix(engine): history keeps its provenance and its session — the false confession and the blank stare
DESIGN FIT: three of round 7's five defects share ONE root — the conversation-history
layer persists only {role, content}, discarding tool provenance, session scoping, and the
distinction between a real user turn and an internal utility call. Fixes A and B RESTORE
Will's design rather than extend it: his agentic path already scopes history per session,
the plain path never got it, and his own source carries the TODO admitting the resulting
race (chat.el, handle_chat: "process-global key; concurrent /api/chat requests without
session_id race on this read-append-write"). Fix C repairs one join Will wrote that was
correct for a year and one we added last week. E1/E2 are ours.

FIX A — tool provenance in history (kills the FALSE CONFESSION)
  Root cause, EXECUTED-verified: handle_chat_agentic recorded turns via hist_append, which
  emits {"role","content"} only. server_tool_use blocks, web_search_tool_result blocks and
  every citation were discarded, then replayed as text. On the next turn the model saw a
  data-rich answer with zero evidence a search had happened, and its own permanent rule
  ("never describe a search you did not perform") left one conclusion available: that it
  had fabricated the data. It apologised for a search it HAD run — four independent lines
  of evidence confirm the search was real. The defect is not the model's honesty. It is
  that we deleted the evidence and then asked it to account for itself.
  Change: agentic_loop accumulates the source URLs it already walks past (citations and
  web_search_tool_result content) and returns them as "sources"; handle_chat_agentic folds
  tools_used + sources into a receipt line stored WITH the assistant turn. Receipts are
  unconditional — a negative receipt ("no tools ran") is the other half of the guarantee,
  because "no evidence of a tool" and "evidence of no tool" were previously identical in
  the transcript. conv_history_block splits the receipt off before snipping so a long
  answer cannot truncate away the evidence. The user never sees it: it is appended to the
  history copy, not the reply.

FIX B — one history key for both paths (kills the BLANK STARE)
  Root cause, EXECUTED-verified: the agentic path keyed history on session_hist_<id>; the
  plain path was hard-wired to the process-global conv_history and never read session_id.
  One conversation, two buckets. Proven in the guest engram: the scoped node held exactly
  two turns starting at "Try again" while the earlier exchanges sat unscoped.
  Change: conv_hist_key/conv_hist_label are now the single definition, used by BOTH paths;
  session_id is threaded route -> layered_cycle -> layered_generate / conv_history_record.
  The 2-line fallback (plain path reads the agentic key) was REJECTED: it keeps the
  process-global bucket as a live write target, which is the bleed the TODO describes.
  Also found and closed while threading: layered_cycle read session_id from the state key
  "current_session_id", which is read here and WRITTEN NOWHERE in the entire source. It
  was unconditionally "", so TODO(reliability #4) — per-session steward continuity — was
  dead code that could never fire. It fires now.
  LAZY SESSION, decided explicitly: we create the session EAGERLY at the door (app half,
  ui#223) rather than migrating orphaned turns. Migration would copy the CONTENTS of a
  process-global bucket, possibly another conversation's, into a named session — the bleed,
  performed deliberately. Eager creation makes the situation impossible instead. Migration
  is deliberately not implemented and must not be added without solving provenance first.

FIX C — the two text-join seams ("to.Good", byte-verified 0x77 0x2e 0x47)
  Two bare `+` joins, written a year apart, had drifted into two answers to one question:
  within-response block joins (Will's, 2026-05-03, latent until server-side web_search
  began interleaving non-text blocks) and across-round joins (ours, 62af564).
  Change: one named rule, text_join_sep, at both sites. NOT a blanket separator — a cited
  answer splits MID-SENTENCE ("The current temperature is " + "86°F" + ", with "), so a
  blanket separator shatters every sourced sentence. The rule takes the one bit that
  distinguishes the cases: whether a NON-TEXT block intervened. Hoisting it also makes the
  fix verifiable in the shipped binary, which an inline `+` is not.

FIX E1 — utility generations stay out of the transcript
  Title generation ("Write a 3-6 word title...") and insight passes ran down the same plain
  door as a real message and were recorded as if the user had typed them; the same calls are
  the "model":"unknown" rows in usage.jsonl. is_utility_request reads an explicit utility
  flag from the app, with the __title__/__insight__ id prefixes as a fallback for older
  clients. Answered normally, never recorded.

FIX E2 — OPERATOR IDENTITY is scoped to tool-capable turns
  The block (env USER/HOME, closing "This is a hard rule") was prepended to EVERY system
  prompt including chat mode. On a Tools:Off turn there is no filesystem in reach, so it
  governed nothing and merely supplied the loudest fact in the prompt — which is why the
  model opened a fresh conversation with "You're test, on your machine at /Users/test".
  Hoisted to operator_identity_block() and gated on !chat_mode. Unchanged wherever a file
  or command tool can actually be reached.

ALSO: agentic_loop's per-session history persist had a second hand-rolled copy of
conv_history_persist with a different label expression, different salience scores and
different tags for the same node. Since both now derive the label from conv_hist_label and
engram_node_full upserts by label, two score policies were writing one node. Collapsed to
one writer.

BUILD NOTE: dist/elp-c-decls.h is force-included by the documented link recipe and carried
the OLD C arities, so it is updated here. This is the build-support header, NOT the stale
generated dist/soul.c — no dist/*.c was read or edited; all engine changes are .el source.
chat.elh/soul.elh are committed because a first-pass build against the old signatures FAILS
(measured); the other regenerated headers are reverted as unrelated churn.

BUILT: 887,000 bytes, sha256 d632b061ad75269d6adeb52578d030eaf49e895d91289d7f946b19c08450d728
Zero el_str_concat(<int>, str_len(...)) sites (the BUG-PLAINCHAT-1 miscompile guard).
web_search_20250305 and disable_parallel_tool_use both still present — PR #108's web search
and the ADR-0005 stopgap are intact.

Refs neuron#109 (builds on it), neuron#78 (Receipt Contract — the real fix A is a stopgap for)

Co-Authored-By: Claude Opus 5 <noreply@anthropic.com>
2026-08-05 22:59:54 -05:00
Tim Lingo 635f6febe4 feat(engine): plain chat generates at L3 — inside the safety cycle, not around it
Neuron Soul CI / build (pull_request) Failing after 12m8s
Neuron Soul CI / deploy (pull_request) Has been skipped
Non-agentic /api/chat (the desktop app's default "Tools: Off" mode) returned the
user's own screened text as a bare non-JSON string. Every JSON client failed to
parse it and showed "Couldn't reach Neuron - it may be offline."

Root cause: f52d5bd (2026-06-11) correctly moved the route onto the layer spine
(handle_chat -> layered_cycle), but L3 never got a generator — imprint_respond()
annotates its input and returns it. Two pieces of the architecture were already
waiting for that step: layered_cycle parks a bell directive in the state key
build_system_prompt is written to consume, and build_system_prompt carries a
chat_mode ("no tools") flag with no live caller.

The fix composes rather than replaces. Wiring handle_chat would have removed
safety_screen, the hard-bell short-circuit, the whole stewardship layer and
safety_validate — the only enforcing output gate in the codebase — in exchange
for a working reply (see _engine-websearch-20260804/SAFETY-STOP.md). Instead
layered_cycle keeps every gate, in order, and gains a generation step between
imprint_respond and safety_validate.

  L1 screen -> guard -> hard-bell short-circuit -> L2a -> L2b -> L2c
    -> L3 imprint_respond (prompt) -> L3b layered_generate (NEW) -> L1 validate

- chat.el:  NEW layered_generate (L3 generation, no tools offered),
            conv_history_block, conv_history_record.
            FIX build_system_prompt never concatenated no_tools_rule into its
            return — the "[NO TOOLS THIS TURN]" rule reached no model at all.
            handle_chat annotated DO-NOT-WIRE with the reason.
- soul.el:  layered_cycle gains L3b + post-validation turn bookkeeping.
- routes.el: NEW plain_chat_envelope; all three /api/chat dispatch sites wrap the
            cycle's output. Built OUTSIDE the cycle so safety_validate always sees
            raw model text — nothing to unwrap or rebuild on the crisis path.
            Emits both `reply` and `response`: the desktop app reads `reply`,
            the CLI tools and telegram-gateway read `response`.

Also fixes BUG-PLAINCHAT-1, a pre-existing CRITICAL crash on the crisis path.
elc compiles `let n: Int = pos + str_len(marker)` to el_str_concat() — string
concat on two integers — inside a block-expression initializer, segfaulting the
daemon (SIGSEGV in strlen). Six inline copies of the same " | ts:" parser had it:
two in layered_cycle L2c, two in engram_compile (live on the AGENTIC path too),
two in affective_context_prefix. A distress turn following an earlier affective
turn killed the whole process. Proven pre-existing: an unmodified baseline binary
crashes identically, and the same bad C is in the committed dist/soul.c. Fixed by
hoisting to one top-level function, affective_node_ts(), where the expression
compiles to integer addition — verified in the generated C.

Proof (throwaway HOME/engram, explicit NEURON_PORT, live chain untouched):
- Plain turn returns a JSON envelope with the provider's answer, not an echo.
- Captured request body: no `tools`, no `tool_choice`; system prompt carries the
  NO-TOOLS rule. Tools:Off means no tool is offered, structurally.
- Hard bell: canned 988 message, and the provider request count does not move —
  the message never reaches a model.
- Soft bell + a 2-char model reply: safety_validate's care phrase is appended to
  the MODEL's output. Output gate acting, on this route.
- The L1 bell directive now reaches the model here for the first time (the state
  addendum had a producer and no consumer).
- test_layered_cycle PASS; all six El suites byte-identical to baseline.
- verify-soul-contract.sh (bash 5.3): GATE PASS, 27/27, immutability PASS.
- The crash sequence that killed the baseline daemon now returns HTTP 200.

Not proven: no live Anthropic call — the login keychain refuses the key to a
non-interactive process (rc=24 errSecInteractionNotAllowed). Details and the
one-command close-out are in _engine-plainchat-20260805/README.md §7.

Builds on PR #108. dist/soul.c deliberately not regenerated — Will's toolchain.

Co-Authored-By: Claude Opus 5 <noreply@anthropic.com>
2026-08-05 09:11:03 -05:00
Tim Lingo 62af5649fe feat(engine): port Anthropic server-side web_search into the agentic loop
Neuron Soul CI / build (pull_request) Failing after 10m45s
Neuron Soul CI / deploy (pull_request) Has been skipped
Re-authors soul-webfix-20260711.patch in El (the patch is a diff against
generated C at month-old offsets, so nothing was applied as a patch). Its
last two hunks — an unrelated /api/safety-contact implementation — were
deliberately not ported; that route already exists and is safety-critical.

Activation restores existing design, it does not invent a mechanism:
commit 8eea1d9 (2026-06-09, Tim-approved) made native web_search built-in
with no user-facing toggle, and tests/test_agentic_tools.el section 2 still
asserts agentic_tools_all() contains it — an assertion main currently fails.
The call site was lost when agentic_tools_all() (connector tools, PR #19)
replaced agentic_tools_with_web(). Attaching in agentic_tools_all() covers
handle_chat_agentic, handle_dharma_room_turn_agentic and agentic_resume.

pause_turn handling is included and was genuinely missing: the shipped
binary has zero occurrences of it. Without it a paused server-side search
returns only the text written so far and the loop treats it as final —
a silently truncated answer. final_text now accumulates across resume
cycles rather than overwriting (overwriting would discard everything
written before the pause).

Default tool version is web_search_20250305, NOT the newer _20260209, and
that is a measured choice: _20260209's dynamic filtering uses server-side
programmatic tool calling, which the API refuses to combine with ADR 0005's
stopgap —

  HTTP 400 invalid_request_error
  tool_choice.disable_parallel_tool_use: true cannot be used with
  programmatic tool calling

Dropping the stopgap would resurrect neuron#78 bug b (killed runs 3/3 in
ADR 0005's own A/B). The basic variant is compatible with the stopgap and
returns real results, so neither feature is dropped. Version lives in state
key web_search_tool_version; flipping it once the stopgap retires is a
config write, no recompile. The fallback also fires on "programmatic tool
calling" so a premature flip self-heals loudly instead of dying.

Also fixes a real bug this port exposed: json_get is a first-match scanner
and a cited text block serialises citations FIRST, so json_get(block,"type")
returned the nested citation's type and every citation-bearing block — the
ones carrying the searched facts — was silently dropped from the reply.
Reply length on the same question: 79 -> 360 chars.

Other loop changes: server_tool_use accounting into tools_used, iteration
cap 8->12 for pause/resume cycles, max_tokens 4096->16384, container-id
carry-forward, API error head logged instead of swallowed, tools_used gated
on is_tool_turn so a truncated tool block is not reported as work done.

dist/soul.c is deliberately NOT regenerated — the local elc predates Will's
last regen (e610a41) and regenerating with an older compiler risks unrelated
codegen drift. Source only; regen is Will's.

E2E-VERIFIED on a sandbox soul (scratch HOME/engram, dead axon+ISE, explicit
NEURON_PORT): live Bentonville weather with tools_used ["web_search"]; the
27-route contract gate PASSes; the parallel-tool stopgap still completes a
3-file mission with no 400; a 3-search 3,486-char answer kept its end
sentinel. Honest gap: pause_turn is compiled in but not exercised by a live
pause (max_uses:5 caps the server loop below the pause threshold).

Co-Authored-By: Claude Opus 5 <noreply@anthropic.com>
2026-08-04 22:57:59 -05:00
Tim Lingo 710761e2d5 fix(engine): send tool_choice.disable_parallel_tool_use on agentic loop (STOPGAP)
The agentic loop keeps only the FIRST tool_use block per round (chat.el:2281,
"Capture first tool_use block only"). Anthropic lets a model emit several
tool_use blocks in one message and requires a tool_result for every one, so a
parallel-tool turn is answered once, the rest are dropped, and the next request
dies with:

  tool_use ids were found without tool_result blocks immediately after

(neuron#78 quotes this as "tool_use ids found without tool_result"; the above is
the API's actual wording - recorded so the next person's grep matches.)

This constrains the wire to match what the loop can assemble:
  "tool_choice":{"type":"auto","disable_parallel_tool_use":true}

STOPGAP - AND THE DURABLE FIX ALREADY EXISTS. A correct multi-tool loop is
already in Will's EL runtime, in C, and the soul does not call it. Verified on
el:origin/main lang/el-compiler/runtime/el_runtime.c: llm_register_tool:9616,
llm_build_tool_results:9743 - which walks EVERY content block, emits one
tool_result per tool_use, and sets is_error for an unregistered tool -
llm_call_agentic:9817 calling it at :9918, iteration cap 10 at :9847. Will's
commit 12d5e77 (2026-04-30). grep for llm_call_agentic/llm_register_tool across
every neuron/*.el returns nothing; dist/soul.c has zero references. chat.el
hand-rolls its own single-tool loop instead, and that is the one that breaks.

The durable fix is therefore to register the soul's tools via llm_register_tool
and call llm_call_agentic - deleting a loop, not writing one. See ADR 0005.

Our own approved spec called this seven weeks ago:
docs/research/agentic-tool-approval-design.md (2026-06-12, "Approved for build"),
line 20 on the defect, line 30 on the goal ("Execute all tool_use blocks in a
turn (one result per block)").

Two edits, because dist/soul.c cannot be regenerated here (Will's gated elc/elb
toolchain is not on this machine):
  (a) chat.el:2255 - source of truth, so a later regen carries the fix.
      One edit covers all three routes: agentic_loop is called from chat.el:2152
      (/api/chat agentic), :2676 (dharma room) and :2496 (agentic_resume).
  (b) dist/soul.c:28173 - generated form, hand-spliced. Line 27624 is the
      non-agentic/OpenAI-compat req_body (no tools) and was left untouched.
Prior art reused rather than reinvented: soul-narrated-runs-20260713.patch
(27,824 bytes) line 78 spliced this same string into the same concat chain on
2026-07-13.

Deliberately NOT ported from that patch, having read it: max_tokens is not
changed by it (16384 sits on both sides of the hunk; our main's 4096 is a
separate output-truncation concern), and its pause_turn pairing fix - same
defect class - is unreachable today because no server-side web_search is wired
(agentic_tools_with_web at chat.el:1418 is never called), so it is untestable
and logged instead.

Proven E2E on a scratch profile and port 7791, never the live chain. A/B against
a pristine origin/main control built from the same vendored runtime: fixed
completed the mission (tools_used read_file x3, 4 iterations, correct answer);
control failed 3/3. Direct API probe confirmed the mechanism - without the field
the model emits 3 parallel tool_use blocks and replaying the unfixed loop's next
turn returns HTTP 400; with it, exactly 1 block.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
2026-08-03 17:07:04 -05:00
will.anderson 74520b8333 Merge pull request 'ci: pin + complete vendored el-runtime so reconciled soul.c links' (#105) from ci/pin-vendored-runtime into main
Neuron Soul CI / build (push) Failing after 14m36s
Neuron Soul CI / deploy (push) Has been skipped
2026-08-03 16:08:51 +00:00
will.anderson 7f3d6ed8cd ci: update vendored el-runtime to complete v1.0.0-20260501
Neuron Soul CI / build (pull_request) Has been cancelled
Neuron Soul CI / deploy (pull_request) Has been cancelled
The runtime vendored alongside the CI pin was the Jul-21 snapshot, which
predates two builtins the reconciled ship-soul now calls:
  - http_delete_json  (boot-counter HTTP write-back, awareness/memory self-review)
  - engram_act_stats_json  (heartbeat activation observability)
Compiling dist/soul.c against the stale runtime fails with implicit-declaration
errors. Vendor the current release runtime (identical to the one the soul was
gate-verified against: verify-soul-contract PASS, genesis boots clean, full
safety-contact) so the CI Linux soul is byte-for-byte the verified soul.
2026-08-03 11:07:38 -05:00
will.anderson eed6487114 ci: pin soul build to vendored release runtime v1.0.0-20260501
The soul build downloaded el-runtime-c 'latest' from Artifact Registry. The
merged ship-soul calls engram_prune_telemetry, which the latest published
runtime no longer defines, so an unpinned build fails to link — the failure
mode that let a broken/handlerless soul reach prod.

Vendor the release runtime v1.0.0-20260501 (el_runtime.c/.h) into the repo and
compile the soul against it. This is the exact runtime the merged soul was
verified against (verify-soul-contract GATE PASS, genesis boot survives, full
safety-contact response), making the build reproducible and independent of a
moving AR 'latest'.

The verify-soul-contract.sh HARD-BLOCK gate already runs before Publish (from
the CI-hardening arc on main), so a destructive or stale soul can never
publish/deploy again.
2026-08-03 11:06:26 -05:00
will.anderson 2c2aaa0653 Merge pull request 'Reconcile: main = union of all ship-critical soul fixes (beta-gating)' (#104) from reconcile/soul-union-main into main
Neuron Soul CI / build (push) Has been cancelled
Neuron Soul CI / deploy (push) Has been cancelled
2026-08-03 16:03:46 +00:00
will.anderson e610a412b9 regen soul.c from reconciled tree + harden contract gate (#199 by-id, isolation)
Neuron Soul CI / build (pull_request) Failing after 12m40s
Neuron Soul CI / deploy (pull_request) Failing after 14m47s
dist/soul.c: regenerated amalgamation (1.15MB) from the reconciled sources via
the hide-.elh + elc --target=c recipe, so the shipped translation unit CI
compiles now actually carries every landed fix — genesis-boot SIGSEGV (#150),
safety-contact 988 truncation (#96), url-decode multi-word search, honest
receipts (#100/#101), immutability arc (#83), and the bounded payloads (#103).

verify-soul-contract.sh, two non-weakening fixes (both false-NEGATIVE bugs that
spuriously failed a CORRECT soul; neither relaxes what fails a defective one):
 1. #199 by-id gate: verify tombstone/KEPT via /api/neuron/graph?id=<id>&depth=1
    (a compact neighborhood) instead of grepping engram_scan_nodes_json(9999,0)
    — a multi-MB, salience-ordered, 9999-capped whole-graph dump in which the
    salience-0.01 tombstone marker sorts past the cap and vanished.
 2. Isolation: pin SOUL_ISE_URL to the dead axon port. Unsetting ENGRAM_URL was
    not enough — the periodic engram sync defaults its source to the LIVE engram
    (http://localhost:8742), so the 'isolated' gate pulled the operator's real
    brain (56 -> 12k nodes in seconds), which both broke Section B determinism
    and read live state. Now the soul stays on its own store.

Verified GREEN on a throwaway port/HOME (live :7770/:8742/~/.neuron untouched):
gate PASS x3 (presence 27/27, immutability all 5 KEPT); safety-contact POST 218B
/ GET 208B full untruncated; multi-word search (%20 and +) returns ranked hits
with an all-gibberish control at 0; bounded session/begin 1370B; honest ok:false
on a missing-id delete; genesis (ntn-genesis) boots clean through mem_save with
no SIGSEGV.
2026-08-03 11:01:46 -05:00
will.anderson 8ba35a0d56 reconcile: merge Will's self-review WIP (456267a) into main
Union of all ship-critical soul fixes for the Mac beta:
- Keeps main's honest receipts (#100/#101), immutability arc + #199 by-id
  gate (#83), Track B threat routing (#76), bounded beginSession (#103),
  CI hardening (#85/#86), elc typo hotfix (#77), neuron-dev-setup (#84).
- Brings WIP's genesis-boot SIGSEGV fix (#150/#95), safety-contact 988
  truncation fix (#96), bounded-persona floor (#93), and 10 self-review
  commits (importance flattening, curiosity DF gating, WM/heartbeat
  observability, boot-counter telemetry).
- Folds the multi-word ranked-search fix: api_query_param now url_decode()s
  the extracted value so q=foo%20bar / foo+bar tokenize as two words.

Conflicts (neuron-api.el payload-bound comments, mcp-wrapper tool_forget)
resolved toward the correct end state: main's verified honest-receipt
read-back is kept; WIP's improved forget description is kept. Generated
dist/*.c taken from main and will be regenerated from this reconciled
source in the following commit.
2026-08-03 10:35:01 -05:00
will.anderson b75d5c8c30 Merge pull request 'Bound beginSession/compileCtx payloads to a compact digest (main)' (#103) from fix/bound-session-payload-main into main
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2026-08-01 16:42:05 +00:00
will.anderson 9bbb4f2af8 Bound beginSession/compileCtx payloads to a compact digest
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Port the payload-bounding fix (PR #102, commit 872120c) onto main. The
session-init endpoints projected unbounded engram nodes (~900KB), closing
the MCP client socket on every beginSession. Cap the lists (8 activated /
10 recent for begin_session, 10/20 for compile_ctx) and project each node
to a light identity + a bounded, UTF-8-safe content snippet via
api_compact_node / api_compact_activated / api_utf8_trunc. Response drops
~900KB -> ~12KB; full content stays available via recall/fetch/inspectGraph.

Regenerate dist/soul.c (the CI-built amalgamation) and dist/neuron-api.c
from source. The soul.c regen also compiles in already-merged source the
previously-committed soul.c was stale against (agent write/edit receipt
fixes, #100/#101); verified via scripts/verify-soul-contract.sh
(PRESENCE + IMMUTABILITY PASS) and a clean CI-style cc build.
2026-08-01 11:37:04 -05:00
will.anderson ec219c5830 Merge pull request 'fix(mcp-wrapper): forget/delete tools no longer return fake ok receipts (BUG-18)' (#101) from fix/receipts-wrapper-forget into main
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2026-08-01 15:56:36 +00:00
will.anderson 731efaedaf Merge pull request 'fix(chat): agent write_file/edit_file no longer return false success receipts (BUG-29)' (#100) from fix/receipts-agent-tools into main
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2026-08-01 15:56:32 +00:00
Tim Lingo 3723e3b7e7 fix(mcp-wrapper): forget/delete tools no longer return fake ok receipts (BUG-18)
Root cause: two false-receipt paths in the wrapper's delete family.
- delete_by_id (removeKnowledge, deleteProcess, deleteImprint,
  dischargeWonder) FABRICATED {"ok":true,...,"note":"soft-deleted"}
  without calling the soul at all — the 'soul does not yet expose a delete
  HTTP route' note was stale (/api/neuron/node/delete exists and tombstones
  any node type).
- tool_forget forwarded the soul's response but never verified the deletion
  actually persisted before answering ok.

The change (Receipt Contract rule 1 — a tool result must reflect what
actually happened):
- delete_by_id now routes to the soul's real /api/neuron/node/delete and
  propagates its answer (honest 'node not found' for bad ids).
- Both handlers read back before answering ok: GET /api/neuron/graph?id=..
  &depth=1 must show the tombstone marker (label "tombstone:<id>"); if it
  does not, answer {"ok":false,"error":"delete_not_persisted",...} in
  the soul's not-persisted error shape (api_not_persisted).
- Soul errors and transport failures pass through unchanged.

E2E evidence (sandbox soul :7791 + wrapper :7792, elb builds):
- unpatched: removeKnowledge on a NONEXISTENT id -> {"ok":true,
  "deleted":"kn-DOES-NOT-EXIST-deadbeef","note":"soft-deleted"} (lie)
- patched:   same call -> {"error":"node not found: ..."} (soul's answer)
- happy path: remember -> forget -> {"ok":true,"tombstoned":true};
  read-back: hidden from default /list/Memory, present with
  ?include_deleted=1, node KEPT in full graph view (immutability intact)
- scripts/verify-soul-contract.sh on the soul it talks to: GATE PASS
  (27/27 presence + immutability)

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
2026-08-01 10:52:21 -05:00
Tim Lingo 62c562a3f1 fix(chat): agent write_file/edit_file no longer return false success receipts (BUG-29)
Root cause: dispatch_tool's write_file returned {"ok":true} without checking
fs_write's result, and edit_file returned ok:true even when old_text was absent
(str_replace silently no-ops) and its fs_write was also unchecked. Any failed
or no-op write fed the model a false success receipt, which it then repeated
to the user as fact.

The change (Receipt Contract rule 1 — a tool result must reflect what actually
happened):
- write_file: check fs_write's return (1 = all bytes written, 0 = fail);
  on failure return {"error":"write failed"} in the handler's existing
  error-JSON shape.
- edit_file: reject empty old_text, verify old_text is actually present
  (str_contains) before replacing, and check the fs_write result the same way.
- Verification is by operation result, NOT an fs_read read-back: fs_read arms
  the runtime's one-shot binary send length, the exact mechanism that truncated
  the safety-contact response (#96). Same honest-write pattern as that fix.

E2E evidence (sandboxed elb build, dispatch_tool driven directly):
- unpatched: write_file into a chmod-000 dir -> {"ok":true} (lie);
  edit_file with absent old_text -> {"ok":true} (lie, file untouched)
- patched:   same calls -> {"error":"write failed"} /
  {"error":"old_text not found in file"}; happy paths still ok:true
- scripts/verify-soul-contract.sh on the patched soul: GATE PASS (27/27
  presence + immutability)

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
2026-08-01 10:51:28 -05:00
will.anderson 456267a771 self-review 2026-08-01: fix importance flattening in remember/evolve/cultivate paths
Four sites passed the Float local 'sal' through el_from_float() a second
time. el_val_t is the bit-pattern of the double, so re-wrapping performs
an int64->double VALUE conversion of the bits before re-bitcasting —
garbage that fails engram_decode_score's range check and clamps to
defaults. Net effect: importance="critical" stored 0.5/0.5 — importance
levels were cosmetic on the MCP memory path. Verified fixed live:
critical now stores salience/importance 0.95/0.95. Same bug fixed today
in engram server.el route_create_node (foundation/el 7f03876). Literal
wraps (el_from_float(0.9)) are safe — elc passes numeric literals raw.
2026-08-01 08:42:44 -05:00
will.anderson edb0670670 self-review 2026-08-01: emit discrete wm_saturation_transition ISE
wm_saturated was a sampled boolean — the 0->1 onset and 1->0 release
moments were only recoverable by hand-diffing consecutive heartbeats.
Emit a low-rate transition ISE at each edge carrying the WM top-5 at
that instant, so the composition that caused the regime change is
captured rather than the composition up to 59s later. First beat of a
boot never fires (restart is not a transition).
2026-08-01 08:38:53 -05:00
will.anderson 3d74472a4c Merge pull request 'Add neuron-dev-setup: one-command CORE dev stack onboarding installer' (#84) from feat/neuron-dev-setup into main
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2026-07-22 22:33:33 +00:00
will.anderson acbe858995 Merge remote-tracking branch 'origin/main' into feat/neuron-dev-setup
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2026-07-22 16:49:40 -05:00
will.anderson 3ae07cc7b0 harden(neuron-dev-setup): fix 7 fresh-Mac onboarding installer bugs (#99)
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Co-authored-by: Neuron <will.anderson@neurontechnologies.ai>
Co-committed-by: Neuron <will.anderson@neurontechnologies.ai>
2026-07-22 21:49:30 +00:00
will.anderson 33d2574b72 Merge pull request 'Agent consent: the pause contract + false-receipt kill (2 fixes, stricter only)' (#79) from feat/agent-phase1-soul into main
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2026-07-22 19:50:42 +00:00
will.anderson 0c2d1c41ae Merge pull request 'safety: Track B — route threat-to-others to refusal+911, not 988/self-harm' (#76) from hotfix/trackb-threat-to-others into main
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2026-07-22 19:49:57 +00:00
will.anderson 31d12e4194 Merge branch 'main' into hotfix/trackb-threat-to-others
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2026-07-22 19:49:35 +00:00
will.anderson 96c57c43ba Merge pull request 'ci: link Linux soul with -rdynamic so its http handler resolves' (#86) from ci/rdynamic-http-handler into main
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2026-07-18 19:11:23 +00:00
will.anderson 192b277229 ci: link the Linux soul with -rdynamic so its http handler resolves
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Run 3388's gate failed with every route returning "el-runtime: no http
handler registered". The runtime resolves handle_request (and the tool
handlers) by name via dlsym(RTLD_DEFAULT, ...). On glibc/Linux a symbol is
only visible to dlsym if it is in the dynamic symbol table, so the stripped
CI binary booted but served nothing. macOS exports these freely, which is
why the local build passed and masked it.

Add -rdynamic to the cc link (mirrors the Windows build's
--export-all-symbols). strip -s keeps .dynsym, so the handler still
resolves after stripping. This fixes both the gate AND the actual deployed
soul — without it the Linux/GKE soul is a server that answers nothing.
2026-07-18 14:10:48 -05:00
will.anderson e2e8f0a1e6 Merge pull request 'ci: harden soul-contract-gate boot for the Linux runner' (#85) from ci/harden-gate-boot into main
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2026-07-18 18:59:27 +00:00
will.anderson f0454650a2 ci: harden soul-contract-gate boot for the Linux runner
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The gate booted the soul with `env -i`, which strips the ambient
environment — including the library path the dynamically-linked soul needs
on the GCE CI runner. The soul never came up there, so the gate failed the
build (run 3384) even though the soul is correct (the gate passes locally
against the exact published CI runtime). Switch to preserving the ambient
env and instead UNSET only the live-service vars (ENGRAM_URL/API keys/
identity) while pointing HOME + snapshot at throwaway paths and axon at a
dead port. Isolation is unchanged (verified: no touch of the live
soul/engram); the soul now boots on the runner.
2026-07-18 13:59:02 -05:00
will.anderson 4b24368be2 Add neuron-dev-setup: one-command CORE dev stack onboarding installer
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Scaffolds a reproducible, idempotent installer that stands up the four native
launchd core services (soul :7770, engram :8742, mcp-wrapper :17779,
mcp-proxy :7779), seeds a fresh engram with the genesis identity via forge, and
installs the Claude Code config (neuron agent + core hooks + local MCP). Fully
templated to the invoking user's $HOME; Anthropic key prompted and stored in
Keychain; no secrets committed. Personal automations and synapse-dependent hooks
excluded from core.
2026-07-18 13:42:50 -05:00
will.anderson c199a13a7f Merge pull request 'Land immutability arc + CI soul-contract gate on main' (#83) from feat/immutable-engram-deletes into main
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2026-07-18 18:33:03 +00:00
will.anderson 290a637883 ci: gate the Linux soul on the contract before publishing
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Wire the soul contract gate into ci.yaml as a hard block between the cc
build and the Publish-to-Artifact-Registry step. A non-zero gate fails the
build, so a stale (route-404ing) or memory-destroying (hard-deleting) soul
can never publish neuron-soul to foundation-prod or blue-green deploy to
GKE — the same class-fix now guarding the desktop builds, extended to prod.

Vendors scripts/verify-soul-contract.sh (copied from neuron-ui; the route
contract is baked in, so it's portable POSIX bash/curl with no neuron-ui
source dependency). It boots dist/neuron on a throwaway port with a
throwaway HOME/engram/cgi — never touching ~/.neuron or any live service —
and checks PRESENCE (every app route answered) + IMMUTABILITY (no engram
write route hard-deletes; deletes/forgets tombstone). Adds curl to the
build deps for the probe.
2026-07-18 13:31:33 -05:00
will.anderson 40d800195a Tombstone the remaining forget paths (close the immutability arc)
Phase 1 tombstoned memory/delete + node/delete, but the generic forget
path was still destructive. This routes every forget through the same
tombstone semantics so nothing in the daemon can hard-delete an engram
node anymore.

Canonical helper: mem_tombstone (memory.el, imported first so every module
can call it) — keep the node + its edges, record a Tombstone marker, never
engram_forget. neuron-api's tombstone_node now delegates to it (single
source of truth).

Per-path before -> after:
- memory.el `mem_forget`      hard delete (engram_forget) -> tombstone. This
  alone fixes both callers: the /api/neuron/memory/forget route
  (handle_api_forget) and the cultivate op=="forget".
- awareness.el autonomous `forget` action  engram_forget -> mem_tombstone.
  The soul can no longer autonomously hard-delete a memory.
- mcp-wrapper tool_forget  was a FAKE no-op that returned {"ok","deleted"}
  without deleting OR tombstoning -> now routes to the soul's tombstoning
  /api/neuron/memory/delete; tool description fixed to say it
  supersedes/tombstones (recoverable), not "Remove a node".

Left intentionally as hard deletes (internal GC / lifecycle, not user
memory, all call engram_forget directly): session-summary replace
(chat.el), mem_consolidate dedup (memory.el), session-start telemetry
pruning (soul.el), session lifecycle (sessions.el).

Regenerated both ship paths under a 3GB physical-RSS watchdog (peak ~32MB):
dist/soul.c (single-TU amalgamation, macOS/Linux) and the per-module
dist/{memory,awareness,neuron-api}.c (Windows/Linux build). Verified: no
forget handler calls engram_forget; a forget leaves the node present +
tombstone marker. Gate (neuron-ui verify-soul-contract.sh, new memory-forget
row): PRESENCE + IMMUTABILITY PASS.
2026-07-18 13:22:43 -05:00
will.anderson f3034d23f7 Regenerate per-module dist/neuron-api.c for the immutability fix
soul.c (the macOS single-TU amalgamation) already carries the
tombstone/supersede change, but the Windows/Linux build path compiles
the per-module dist/*.c instead (build-soul-windows.sh excludes soul.c).
That path was still pulling the stale, destructive dist/neuron-api.c —
so without this the cross-compiled neuron.exe would keep hard-deleting
engram nodes even though the source is fixed.

Regenerated with `elc --emit-header neuron-api.el`: no engram_forget in
memory_delete/node_delete (tombstone), supersedes edge in node_update.
Portable C — identical for macOS/Windows/Linux; only the runtime it links
against differs.
2026-07-17 16:57:55 -05:00
will.anderson d337fcb265 Make engram deletes/updates immutable (tombstone + supersede)
The soul was hard-deleting engram nodes: memory/delete and node/delete
called engram_forget (frees the node and drops its incident edges), and
node/update created a replacement then forgot the original with no link
back. That violates the day-one rule that engram nodes are immutable —
memory could be silently, irrecoverably destroyed via the API.

Convert the three destructive handlers to Will's immutability semantics,
mirroring the pattern memory/update and knowledge evolve/promote already
use:

- node/update  -> create the new node, wire a "supersedes" edge new->old,
  KEEP the original. No engram_forget. (Was: create + forget old, no edge.)
- memory/delete and node/delete -> TOMBSTONE: keep the node AND its edges,
  create a Tombstone marker node (content = target id, label
  "tombstone:<id>") wired with a "tombstones" edge. Never engram_forget.
  Default bounded list reads (handle_api_list_typed / the memory list) hide
  tombstoned nodes and the markers; ?include_deleted=1 returns them, and
  internal cognition + /api/graph/nodes still traverse them. memory/update
  was already correct and is unchanged.

Full-graph hiding on /api/graph/nodes is deliberately NOT done at the el
layer: json_array_get is O(index), so filtering that endpoint (called with
limit up to 999999) would be O(n^2). That hide needs a runtime scan filter
and is a separate follow-up; nodes there remain traversable, tagged
status:deleted via the marker edge.

Regenerated dist/soul.c from these sources (flat single-TU amalgamation,
compiled under a 3GB physical-RSS watchdog, peak ~32MB). Verified with
scripts/verify-soul-contract.sh in neuron-ui: PRESENCE passes (all 27
routes) and IMMUTABILITY passes (all four mutation routes KEPT; deletes
produce a real tombstone marker and hide from the default list).
2026-07-17 16:42:30 -05:00
Tim Lingo 4171aadfff fix(engine): BUG-6 — approved writes must land, and say where (false-receipt kill)
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Two compounding defects made every pause->approve write_file report success
while writing NOTHING:

1. The naive json_get scanner matches "content" anywhere in the approve
   body — including INSIDE tool_input, which for write_file always carries
   a content field. The handler therefore treated every approved builtin
   write as already-client-executed, skipped dispatch entirely, and handed
   the model the file's own content as the 'tool result'. The model then
   narrated 'Done, created' — a false receipt with no file. Builtin tools
   now ALWAYS dispatch server-side; client content is only honored for
   non-builtin (MCP/client-executed) tools. Stricter only.

2. write_file returned {"ok":true} unconditionally — fs_write's outcome
   was never checked, so any failed write also reported success. The write
   now verifies the file landed (fs_exists) and returns the RESOLVED path
   in the ok payload; failures return a real error naming the destination.

E2E on the test brain (boot 38): approve-path write lands byte-exact and
the result carries the resolved path; auto-run writes unchanged; denied
writes execute nothing. BUG-5 (approve wire lacked tool_name) had been
masking this one — two stacked bugs on the same path.

NOTE for review: the deeper cure is a nesting-aware json reader; this fix
removes the dangerous consequence at the two spots that lie about disk.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
2026-07-17 09:06:18 -05:00
Tim Lingo 9a6014d65b fix(engine): honor require_approval — the pause contract, implemented (PAUSE-CONTRACT + BUG-LEAK source fixes)
Two consent-flow fixes, gates only get stricter:

1. PAUSE-CONTRACT: the client has sent require_approval:true on every
   agentic request since Phase 1c, but needs_bridge never consulted it —
   builtin sub-escalate tools ran server-side unasked, making the app's
   Ask autonomy silently inert for that whole class. Now the flag is
   persisted per session (set/reset every request, so /approve resumes
   keep it) and ask_all bridges EVERY tool turn. Absent/false = behavior
   byte-identical to before. E2E: the exact probe that executed a write
   unasked now returns the tool_pending envelope with nothing on disk;
   full in-app circle verified (card → crash → resurrection → late
   approve → fence re-fires on re-entry).

2. BUG-LEAK: agent_workspace_root lived in ONE shared state key — any
   request that omitted a root inherited the previous session's folder
   (proven: a rootless curl session wrote into another session's run
   folder). Root is now stored per session and every request re-asserts
   its own (possibly empty) root into the shared key the guards read;
   same re-assert on the /approve and resume paths. Env fallback intact.
   LIMITATION: assumes serialized handling; true per-call scoping means
   threading session_id through dispatch — flagged for review.

Runnable C-patch for the test brain: neuron-container-build/
soul-pause-contract-20260716.patch (pause-contract only; the leak fix
needs the #23 root-write which the running C predates — source carries
both for the regen).

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
2026-07-17 09:06:18 -05:00
Tim Lingo 8cdd1512d1 docs(narrated-runs): engine notes for the regen — compiled-form fixes + debts
Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
2026-07-17 09:06:18 -05:00
will.anderson 64c1789fcc Merge pull request 'hotfix: fix malformed string literals in safety.el/sessions.el that break elc' (#77) from hotfix/elc-source-typos into main
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2026-07-15 18:40:56 +00:00
36 changed files with 17021 additions and 812 deletions
+37 -39
View File
@@ -34,12 +34,12 @@ jobs:
- name: Install build dependencies
run: |
apt-get update -qq
apt-get install -y gcc libcurl4-openssl-dev apt-transport-https ca-certificates
apt-get install -y gcc curl libcurl4-openssl-dev apt-transport-https ca-certificates
echo "deb [trusted=yes] https://packages.cloud.google.com/apt cloud-sdk main" \
> /etc/apt/sources.list.d/google-cloud-sdk.list
apt-get update -qq && apt-get install -y google-cloud-cli
- name: Download El runtime from Artifact Registry
- name: Authenticate to GCP + stage PINNED El runtime
env:
GCP_SA_KEY: ${{ secrets.GCP_SA_KEY }}
run: |
@@ -47,41 +47,21 @@ jobs:
gcloud auth activate-service-account --key-file=/tmp/gcp-key.json
gcloud config set project neuron-785695
# PINNED RUNTIME — do NOT pull "latest" from Artifact Registry.
# The ship-soul calls engram_prune_telemetry (awareness.el sync/heartbeat
# self-review). The latest published el-runtime-c no longer defines that
# symbol, so an unpinned build fails to LINK — which is exactly how a
# broken/handlerless soul reached prod before. Compile against the
# vendored release runtime v1.0.0-20260501: the exact runtime the merged
# ship-soul was verified against (verify-soul-contract GATE PASS +
# genesis boot survives + full safety-contact response). It is committed
# under vendor/ so the soul build is fully reproducible and never depends
# on a moving AR "latest".
rm -rf /opt/el/runtime
mkdir -p /opt/el/runtime
# Get latest version of each runtime package (elc/elb not needed — we compile
# dist/soul.c directly; running elb on Linux OOM-kills the runner, and we
# always use the repo's pre-built soul.c anyway).
get_latest() {
gcloud artifacts versions list \
--repository=foundation-prod \
--location=us-central1 \
--project=neuron-785695 \
--package="$1" \
--sort-by="~createTime" \
--limit=1 \
--format="value(name)" 2>/dev/null | awk -F/ '{print $NF}'
}
RC_VER=$(get_latest el-runtime-c)
RH_VER=$(get_latest el-runtime-h)
echo "Downloading runtime@${RC_VER}"
gcloud artifacts generic download \
--repository=foundation-prod --location=us-central1 --project=neuron-785695 \
--package=el-runtime-c --version="${RC_VER}" \
--destination=/opt/el/runtime/
gcloud artifacts generic download \
--repository=foundation-prod --location=us-central1 --project=neuron-785695 \
--package=el-runtime-h --version="${RH_VER}" \
--destination=/opt/el/runtime/
mv /opt/el/runtime/el_runtime.c* /opt/el/runtime/el_runtime.c 2>/dev/null || true
mv /opt/el/runtime/el_runtime.h* /opt/el/runtime/el_runtime.h 2>/dev/null || true
echo "El runtime ready: $(ls /opt/el/runtime/)"
cp vendor/el-runtime/v1.0.0-20260501/el_runtime.c /opt/el/runtime/el_runtime.c
cp vendor/el-runtime/v1.0.0-20260501/el_runtime.h /opt/el/runtime/el_runtime.h
echo "El runtime PINNED to v1.0.0-20260501: $(ls /opt/el/runtime/)"
- name: Build neuron soul binary
run: |
@@ -94,19 +74,37 @@ jobs:
# entirely: elb on Linux would OOM the runner (elc uses 24GB+ virtual memory
# on a 16GB host) and we always restore from the repo's soul.c anyway.
mkdir -p dist
cc -O2 -DHAVE_CURL \
# -rdynamic: the el runtime resolves the HTTP request handler (and the
# tool handlers) by NAME via dlsym(RTLD_DEFAULT, "handle_request").
# macOS exports these symbols freely, but glibc/Linux only makes symbols
# visible to dlsym if they are in the dynamic symbol table — so without
# -rdynamic the stripped Linux binary boots but returns "el-runtime: no
# http handler registered" for EVERY route (i.e. a soul that serves
# nothing). Same reason the Windows build links -Wl,--export-all-symbols.
cc -O2 -DHAVE_CURL -rdynamic \
-I$RUNTIME \
dist/soul.c \
$RUNTIME/el_runtime.c \
-lssl -lcrypto -lcurl -lpthread -lm \
-o dist/neuron
# Strip debug symbols and non-essential symbol table entries.
# -s removes the symbol table + relocation info (max size reduction).
# Keeps the binary functional; debuggability is preserved via source + CI logs.
# -s strips .symtab + debug for size. .dynsym (which -rdynamic populated
# with the dlsym-resolved handlers) is preserved, so the handler still
# resolves after stripping.
strip -s dist/neuron
ls -lh dist/neuron
- name: Soul contract gate (HARD BLOCK — no destructive/stale soul publishes)
run: |
# Boots dist/neuron on a throwaway port with a throwaway HOME/engram/cgi
# (never touches ~/.neuron or any live service) and fails the build if any
# app-contract route is unanswered (PRESENCE) or any engram write route
# hard-deletes instead of tombstoning/superseding (IMMUTABILITY). Non-zero
# here blocks Publish -> Artifact Registry -> GKE deploy, so a stale or
# memory-destroying soul can never reach prod.
chmod +x dist/neuron scripts/verify-soul-contract.sh
bash scripts/verify-soul-contract.sh dist/neuron 7796
- name: Smoke test
run: |
file dist/neuron
+15
View File
@@ -212,6 +212,21 @@ fn emit_heartbeat() -> Void {
// cap-pinned regime; wm_top0_streak counts consecutive heartbeats with
// the same node in WM slot 0 (state-tracked, same mechanism as wm_delta).
let wm_sat: Int = if wmc >= 24 { 1 } else { 0 }
// Saturation TRANSITION event (2026-08-01 self-review): wm_saturated is a
// sampled boolean — the 0→1 onset and 1→0 release moments were only
// recoverable by diffing consecutive heartbeats by hand. Emit a discrete
// low-rate ISE at each edge, carrying the WM top-5 at that instant so the
// composition that CAUSED the regime change is captured, not the
// composition 59 seconds later. State-tracked like wm_delta; first beat
// of a boot never fires (prev defaults to current) — a restart is not a
// transition.
let prev_sat_raw: String = state_get("soul.prev_wm_saturated")
let prev_sat: Int = if str_eq(prev_sat_raw, "") { wm_sat } else { str_to_int(prev_sat_raw) }
if wm_sat != prev_sat {
let sat_dir: String = if wm_sat == 1 { "onset" } else { "release" }
ise_post("{\"event\":\"wm_saturation_transition\",\"direction\":\"" + sat_dir + "\",\"wm_active\":" + int_to_str(wmc) + ",\"wm_top\":" + wm_top + ",\"ts\":" + int_to_str(ts) + "}")
}
state_set("soul.prev_wm_saturated", int_to_str(wm_sat))
let wm_top0: String = json_array_get(wm_top, 0)
let wm_top0_id: String = json_get(wm_top0, "id")
let prev_top0: String = state_get("soul.prev_wm_top0")
+960 -132
View File
File diff suppressed because it is too large Load Diff
+26 -3
View File
@@ -1,4 +1,4 @@
// auto-generated by elc --emit-header do not edit
// auto-generated by elc --emit-header - do not edit
extern fn chat_default_model() -> String
extern fn engram_numeric_valid(s: String) -> Bool
extern fn parse_float_x100(s: String) -> Int
@@ -16,18 +16,35 @@ extern fn engram_nodes_merge(a: String, b: String) -> String
extern fn id_in_seen(node_id: String, seen: String) -> Bool
extern fn add_to_seen(seen: String, node_id: String) -> String
extern fn engram_extract_ids(nodes_json: String) -> String
extern fn affective_node_ts(node_json: String) -> Int
extern fn engram_compile(intent: String) -> String
extern fn distill_transcript(transcript: String) -> String
extern fn json_safe(s: String) -> String
extern fn current_engine_note(model: String) -> String
extern fn bounded_persona_floor() -> String
extern fn operator_identity_block() -> String
extern fn build_system_prompt(ctx: String, chat_mode: Bool) -> String
extern fn hist_append(hist: String, role: String, content: String) -> String
extern fn conv_hist_key(session_id: String) -> String
extern fn conv_hist_label(session_id: String) -> String
extern fn is_utility_request(body: String, session_id: String) -> Bool
extern fn provenance_scan_urls(arr: String, acc: String) -> String
extern fn provenance_add_sources(block: String, btype: String, has_cit: Bool, cit_raw: String, acc: String) -> String
extern fn provenance_names(tools_used: String) -> String
extern fn text_join_sep(accumulated: String, incoming: String, after_interruption: Bool) -> String
extern fn receipt_rule() -> String
extern fn receipt_strip(s: String) -> String
extern fn tool_receipt(tools_used: String, sources: String) -> String
extern fn hist_trim(hist: String) -> String
extern fn hist_trim_with_bell_guard(hist: String) -> String
extern fn clean_llm_response(s: String) -> String
extern fn conv_history_persist(hist: String) -> Void
extern fn conv_history_load() -> String
extern fn conv_history_persist(session_id: String, hist: String) -> Void
extern fn conv_history_load(session_id: String) -> String
extern fn conv_history_record(session_id: String, user_msg: String, assistant_msg: String, receipt: String) -> Void
extern fn conv_history_block(session_id: String) -> String
extern fn layered_generate(prompt: String, imprint_id: String, session_id: String) -> String
extern fn session_preload_bullets(nodes: String, max_bullets: Int, snip_len: Int) -> String
extern fn affective_context_prefix() -> String
extern fn handle_chat(body: String) -> String
extern fn handle_see(body: String) -> String
extern fn studio_tools_json() -> String
@@ -37,6 +54,8 @@ extern fn llm_wire_format() -> String
extern fn json_escape(s: String) -> String
extern fn openai_chat_complete(model: String, base_url: String, api_key: String, safe_sys: String, messages_json: String) -> String
extern fn agentic_tools_literal() -> String
extern fn web_search_tool_json() -> String
extern fn strip_client_web_search(tools_inner: String) -> String
extern fn agentic_tools_with_web() -> String
extern fn connector_tools_json() -> String
extern fn agentic_tools_all() -> String
@@ -46,6 +65,10 @@ extern fn call_neuron_mcp(tool_name: String, args: String) -> String
extern fn agent_workspace_root() -> String
extern fn path_within_root(path: String, root: String) -> Bool
extern fn resolve_in_root(path: String, root: String) -> String
extern fn run_command_is_readonly(cmd: String) -> Bool
extern fn cmd_abs_escape_at(cmd: String, root: String, needle: String) -> Bool
extern fn run_command_guard(cmd: String, root: String) -> String
extern fn classify_tool_risk(tool_name: String, tool_input: String) -> String
extern fn dispatch_tool(tool_name: String, tool_input: String) -> String
extern fn is_builtin_tool(tool_name: String) -> Bool
extern fn next_bridge_id() -> String
Generated Vendored
+92 -85
View File
@@ -171,12 +171,19 @@ el_val_t emit_heartbeat(void) {
el_val_t bf_total_raw = json_get(bf_resp, EL_STR("embedded_count"));
el_val_t bf_total = ({ el_val_t _if_result_15 = 0; if (str_eq(bf_total_raw, EL_STR(""))) { _if_result_15 = (EL_STR("-1")); } else { _if_result_15 = (bf_total_raw); } _if_result_15; });
el_val_t wm_sat = ({ el_val_t _if_result_16 = 0; if ((wmc >= 24)) { _if_result_16 = (1); } else { _if_result_16 = (0); } _if_result_16; });
el_val_t prev_sat_raw = state_get(EL_STR("soul.prev_wm_saturated"));
el_val_t prev_sat = ({ el_val_t _if_result_17 = 0; if (str_eq(prev_sat_raw, EL_STR(""))) { _if_result_17 = (wm_sat); } else { _if_result_17 = (str_to_int(prev_sat_raw)); } _if_result_17; });
if (wm_sat != prev_sat) {
el_val_t sat_dir = ({ el_val_t _if_result_18 = 0; if ((wm_sat == 1)) { _if_result_18 = (EL_STR("onset")); } else { _if_result_18 = (EL_STR("release")); } _if_result_18; });
ise_post(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(EL_STR("{\"event\":\"wm_saturation_transition\",\"direction\":\""), sat_dir), EL_STR("\",\"wm_active\":")), int_to_str(wmc)), EL_STR(",\"wm_top\":")), wm_top), EL_STR(",\"ts\":")), int_to_str(ts)), EL_STR("}")));
}
state_set(EL_STR("soul.prev_wm_saturated"), int_to_str(wm_sat));
el_val_t wm_top0 = json_array_get(wm_top, 0);
el_val_t wm_top0_id = json_get(wm_top0, EL_STR("id"));
el_val_t prev_top0 = state_get(EL_STR("soul.prev_wm_top0"));
el_val_t t0streak_raw = state_get(EL_STR("soul.wm_top0_streak"));
el_val_t t0streak_prev = ({ el_val_t _if_result_17 = 0; if (str_eq(t0streak_raw, EL_STR(""))) { _if_result_17 = (0); } else { _if_result_17 = (str_to_int(t0streak_raw)); } _if_result_17; });
el_val_t t0streak = ({ el_val_t _if_result_18 = 0; if (str_eq(wm_top0_id, EL_STR(""))) { _if_result_18 = (0); } else { _if_result_18 = (({ el_val_t _if_result_19 = 0; if (str_eq(wm_top0_id, prev_top0)) { _if_result_19 = ((t0streak_prev + 1)); } else { _if_result_19 = (1); } _if_result_19; })); } _if_result_18; });
el_val_t t0streak_prev = ({ el_val_t _if_result_19 = 0; if (str_eq(t0streak_raw, EL_STR(""))) { _if_result_19 = (0); } else { _if_result_19 = (str_to_int(t0streak_raw)); } _if_result_19; });
el_val_t t0streak = ({ el_val_t _if_result_20 = 0; if (str_eq(wm_top0_id, EL_STR(""))) { _if_result_20 = (0); } else { _if_result_20 = (({ el_val_t _if_result_21 = 0; if (str_eq(wm_top0_id, prev_top0)) { _if_result_21 = ((t0streak_prev + 1)); } else { _if_result_21 = (1); } _if_result_21; })); } _if_result_20; });
state_set(EL_STR("soul.prev_wm_top0"), wm_top0_id);
state_set(EL_STR("soul.wm_top0_streak"), int_to_str(t0streak));
el_val_t ch_id1 = json_get(json_array_get(wm_top, 1), EL_STR("id"));
@@ -184,28 +191,28 @@ el_val_t emit_heartbeat(void) {
el_val_t ch_id3 = json_get(json_array_get(wm_top, 3), EL_STR("id"));
el_val_t ch_id4 = json_get(json_array_get(wm_top, 4), EL_STR("id"));
el_val_t prev_top5 = state_get(EL_STR("soul.prev_wm_top5"));
el_val_t ch0 = ({ el_val_t _if_result_20 = 0; if (str_eq(wm_top0_id, EL_STR(""))) { _if_result_20 = (0); } else { _if_result_20 = (({ el_val_t _if_result_21 = 0; if (str_contains(prev_top5, wm_top0_id)) { _if_result_21 = (0); } else { _if_result_21 = (1); } _if_result_21; })); } _if_result_20; });
el_val_t ch1 = ({ el_val_t _if_result_22 = 0; if (str_eq(ch_id1, EL_STR(""))) { _if_result_22 = (0); } else { _if_result_22 = (({ el_val_t _if_result_23 = 0; if (str_contains(prev_top5, ch_id1)) { _if_result_23 = (0); } else { _if_result_23 = (1); } _if_result_23; })); } _if_result_22; });
el_val_t ch2 = ({ el_val_t _if_result_24 = 0; if (str_eq(ch_id2, EL_STR(""))) { _if_result_24 = (0); } else { _if_result_24 = (({ el_val_t _if_result_25 = 0; if (str_contains(prev_top5, ch_id2)) { _if_result_25 = (0); } else { _if_result_25 = (1); } _if_result_25; })); } _if_result_24; });
el_val_t ch3 = ({ el_val_t _if_result_26 = 0; if (str_eq(ch_id3, EL_STR(""))) { _if_result_26 = (0); } else { _if_result_26 = (({ el_val_t _if_result_27 = 0; if (str_contains(prev_top5, ch_id3)) { _if_result_27 = (0); } else { _if_result_27 = (1); } _if_result_27; })); } _if_result_26; });
el_val_t ch4 = ({ el_val_t _if_result_28 = 0; if (str_eq(ch_id4, EL_STR(""))) { _if_result_28 = (0); } else { _if_result_28 = (({ el_val_t _if_result_29 = 0; if (str_contains(prev_top5, ch_id4)) { _if_result_29 = (0); } else { _if_result_29 = (1); } _if_result_29; })); } _if_result_28; });
el_val_t ch0 = ({ el_val_t _if_result_22 = 0; if (str_eq(wm_top0_id, EL_STR(""))) { _if_result_22 = (0); } else { _if_result_22 = (({ el_val_t _if_result_23 = 0; if (str_contains(prev_top5, wm_top0_id)) { _if_result_23 = (0); } else { _if_result_23 = (1); } _if_result_23; })); } _if_result_22; });
el_val_t ch1 = ({ el_val_t _if_result_24 = 0; if (str_eq(ch_id1, EL_STR(""))) { _if_result_24 = (0); } else { _if_result_24 = (({ el_val_t _if_result_25 = 0; if (str_contains(prev_top5, ch_id1)) { _if_result_25 = (0); } else { _if_result_25 = (1); } _if_result_25; })); } _if_result_24; });
el_val_t ch2 = ({ el_val_t _if_result_26 = 0; if (str_eq(ch_id2, EL_STR(""))) { _if_result_26 = (0); } else { _if_result_26 = (({ el_val_t _if_result_27 = 0; if (str_contains(prev_top5, ch_id2)) { _if_result_27 = (0); } else { _if_result_27 = (1); } _if_result_27; })); } _if_result_26; });
el_val_t ch3 = ({ el_val_t _if_result_28 = 0; if (str_eq(ch_id3, EL_STR(""))) { _if_result_28 = (0); } else { _if_result_28 = (({ el_val_t _if_result_29 = 0; if (str_contains(prev_top5, ch_id3)) { _if_result_29 = (0); } else { _if_result_29 = (1); } _if_result_29; })); } _if_result_28; });
el_val_t ch4 = ({ el_val_t _if_result_30 = 0; if (str_eq(ch_id4, EL_STR(""))) { _if_result_30 = (0); } else { _if_result_30 = (({ el_val_t _if_result_31 = 0; if (str_contains(prev_top5, ch_id4)) { _if_result_31 = (0); } else { _if_result_31 = (1); } _if_result_31; })); } _if_result_30; });
el_val_t wm_churn = ((((ch0 + ch1) + ch2) + ch3) + ch4);
state_set(EL_STR("soul.prev_wm_top5"), el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(wm_top0_id, EL_STR("|")), ch_id1), EL_STR("|")), ch_id2), EL_STR("|")), ch_id3), EL_STR("|")), ch_id4));
el_val_t wm_top0_wm_raw = json_get(wm_top0, EL_STR("wm"));
el_val_t wm_top0_wm = ({ el_val_t _if_result_30 = 0; if (str_eq(wm_top0_wm_raw, EL_STR(""))) { _if_result_30 = (EL_STR("0")); } else { _if_result_30 = (wm_top0_wm_raw); } _if_result_30; });
el_val_t wm_top0_wm = ({ el_val_t _if_result_32 = 0; if (str_eq(wm_top0_wm_raw, EL_STR(""))) { _if_result_32 = (EL_STR("0")); } else { _if_result_32 = (wm_top0_wm_raw); } _if_result_32; });
el_val_t act_stats = engram_act_stats_json();
el_val_t act_evict_raw = json_get(act_stats, EL_STR("wm_evicted"));
el_val_t act_evict = ({ el_val_t _if_result_31 = 0; if (str_eq(act_evict_raw, EL_STR(""))) { _if_result_31 = (EL_STR("-1")); } else { _if_result_31 = (act_evict_raw); } _if_result_31; });
el_val_t act_evict = ({ el_val_t _if_result_33 = 0; if (str_eq(act_evict_raw, EL_STR(""))) { _if_result_33 = (EL_STR("-1")); } else { _if_result_33 = (act_evict_raw); } _if_result_33; });
el_val_t act_bt_raw = json_get(act_stats, EL_STR("breakthroughs"));
el_val_t act_bt = ({ el_val_t _if_result_32 = 0; if (str_eq(act_bt_raw, EL_STR(""))) { _if_result_32 = (EL_STR("-1")); } else { _if_result_32 = (act_bt_raw); } _if_result_32; });
el_val_t evict_now = ({ el_val_t _if_result_33 = 0; if (str_eq(act_evict_raw, EL_STR(""))) { _if_result_33 = ((0 - 1)); } else { _if_result_33 = (str_to_int(act_evict_raw)); } _if_result_33; });
el_val_t bt_now = ({ el_val_t _if_result_34 = 0; if (str_eq(act_bt_raw, EL_STR(""))) { _if_result_34 = ((0 - 1)); } else { _if_result_34 = (str_to_int(act_bt_raw)); } _if_result_34; });
el_val_t act_bt = ({ el_val_t _if_result_34 = 0; if (str_eq(act_bt_raw, EL_STR(""))) { _if_result_34 = (EL_STR("-1")); } else { _if_result_34 = (act_bt_raw); } _if_result_34; });
el_val_t evict_now = ({ el_val_t _if_result_35 = 0; if (str_eq(act_evict_raw, EL_STR(""))) { _if_result_35 = ((0 - 1)); } else { _if_result_35 = (str_to_int(act_evict_raw)); } _if_result_35; });
el_val_t bt_now = ({ el_val_t _if_result_36 = 0; if (str_eq(act_bt_raw, EL_STR(""))) { _if_result_36 = ((0 - 1)); } else { _if_result_36 = (str_to_int(act_bt_raw)); } _if_result_36; });
el_val_t prev_evict_raw = state_get(EL_STR("soul.prev_wm_evicted"));
el_val_t prev_evict = ({ el_val_t _if_result_35 = 0; if (str_eq(prev_evict_raw, EL_STR(""))) { _if_result_35 = (0); } else { _if_result_35 = (str_to_int(prev_evict_raw)); } _if_result_35; });
el_val_t prev_evict = ({ el_val_t _if_result_37 = 0; if (str_eq(prev_evict_raw, EL_STR(""))) { _if_result_37 = (0); } else { _if_result_37 = (str_to_int(prev_evict_raw)); } _if_result_37; });
el_val_t prev_bt_raw = state_get(EL_STR("soul.prev_breakthroughs"));
el_val_t prev_bt = ({ el_val_t _if_result_36 = 0; if (str_eq(prev_bt_raw, EL_STR(""))) { _if_result_36 = (0); } else { _if_result_36 = (str_to_int(prev_bt_raw)); } _if_result_36; });
el_val_t evict_delta = ({ el_val_t _if_result_37 = 0; if ((evict_now < 0)) { _if_result_37 = (0); } else { _if_result_37 = (({ el_val_t _if_result_38 = 0; if ((evict_now < prev_evict)) { _if_result_38 = (evict_now); } else { _if_result_38 = ((evict_now - prev_evict)); } _if_result_38; })); } _if_result_37; });
el_val_t bt_delta = ({ el_val_t _if_result_39 = 0; if ((bt_now < 0)) { _if_result_39 = (0); } else { _if_result_39 = (({ el_val_t _if_result_40 = 0; if ((bt_now < prev_bt)) { _if_result_40 = (bt_now); } else { _if_result_40 = ((bt_now - prev_bt)); } _if_result_40; })); } _if_result_39; });
el_val_t prev_bt = ({ el_val_t _if_result_38 = 0; if (str_eq(prev_bt_raw, EL_STR(""))) { _if_result_38 = (0); } else { _if_result_38 = (str_to_int(prev_bt_raw)); } _if_result_38; });
el_val_t evict_delta = ({ el_val_t _if_result_39 = 0; if ((evict_now < 0)) { _if_result_39 = (0); } else { _if_result_39 = (({ el_val_t _if_result_40 = 0; if ((evict_now < prev_evict)) { _if_result_40 = (evict_now); } else { _if_result_40 = ((evict_now - prev_evict)); } _if_result_40; })); } _if_result_39; });
el_val_t bt_delta = ({ el_val_t _if_result_41 = 0; if ((bt_now < 0)) { _if_result_41 = (0); } else { _if_result_41 = (({ el_val_t _if_result_42 = 0; if ((bt_now < prev_bt)) { _if_result_42 = (bt_now); } else { _if_result_42 = ((bt_now - prev_bt)); } _if_result_42; })); } _if_result_41; });
if (evict_now >= 0) {
state_set(EL_STR("soul.prev_wm_evicted"), int_to_str(evict_now));
}
@@ -214,13 +221,13 @@ el_val_t emit_heartbeat(void) {
}
el_val_t hb_stats = http_get(el_str_concat(hb_engram_url, EL_STR("/api/stats")));
el_val_t embed_elig_raw = json_get(hb_stats, EL_STR("embed_eligible_count"));
el_val_t embed_elig = ({ el_val_t _if_result_41 = 0; if (str_eq(embed_elig_raw, EL_STR(""))) { _if_result_41 = (EL_STR("-1")); } else { _if_result_41 = (embed_elig_raw); } _if_result_41; });
el_val_t embed_elig = ({ el_val_t _if_result_43 = 0; if (str_eq(embed_elig_raw, EL_STR(""))) { _if_result_43 = (EL_STR("-1")); } else { _if_result_43 = (embed_elig_raw); } _if_result_43; });
el_val_t hb_ats_raw = state_get(EL_STR("soul.auto_term_streak"));
el_val_t hb_ats = ({ el_val_t _if_result_42 = 0; if (str_eq(hb_ats_raw, EL_STR(""))) { _if_result_42 = (0); } else { _if_result_42 = (str_to_int(hb_ats_raw)); } _if_result_42; });
el_val_t hb_ats = ({ el_val_t _if_result_44 = 0; if (str_eq(hb_ats_raw, EL_STR(""))) { _if_result_44 = (0); } else { _if_result_44 = (str_to_int(hb_ats_raw)); } _if_result_44; });
el_val_t act_brk_raw = json_get(act_stats, EL_STR("embed_breaker_open"));
el_val_t act_brk = ({ el_val_t _if_result_43 = 0; if (str_eq(act_brk_raw, EL_STR(""))) { _if_result_43 = (EL_STR("-1")); } else { _if_result_43 = (act_brk_raw); } _if_result_43; });
el_val_t act_brk = ({ el_val_t _if_result_45 = 0; if (str_eq(act_brk_raw, EL_STR(""))) { _if_result_45 = (EL_STR("-1")); } else { _if_result_45 = (act_brk_raw); } _if_result_45; });
el_val_t ctx_cos_raw = json_get(act_stats, EL_STR("ctx_cos"));
el_val_t ctx_cos = ({ el_val_t _if_result_44 = 0; if (str_eq(ctx_cos_raw, EL_STR(""))) { _if_result_44 = (EL_STR("-2")); } else { _if_result_44 = (ctx_cos_raw); } _if_result_44; });
el_val_t ctx_cos = ({ el_val_t _if_result_46 = 0; if (str_eq(ctx_cos_raw, EL_STR(""))) { _if_result_46 = (EL_STR("-2")); } else { _if_result_46 = (ctx_cos_raw); } _if_result_46; });
el_val_t payload = el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(EL_STR("{\"event\":\"heartbeat\",\"pulse\":"), pulse), EL_STR(",\"tick\":")), pulse), EL_STR(",\"boot\":")), boot), EL_STR(",\"idle\":")), idle), EL_STR(",\"idle_ms\":")), int_to_str(idle_ms)), EL_STR(",\"node_count\":")), int_to_str(nc)), EL_STR(",\"edge_count\":")), int_to_str(ec)), EL_STR(",\"node_delta\":")), int_to_str(node_delta)), EL_STR(",\"edge_delta\":")), int_to_str(edge_delta)), EL_STR(",\"wm_active\":")), int_to_str(wmc)), EL_STR(",\"wm_delta\":")), int_to_str(wm_delta)), EL_STR(",\"wm_saturated\":")), int_to_str(wm_sat)), EL_STR(",\"wm_top0_streak\":")), int_to_str(t0streak)), EL_STR(",\"wm_churn\":")), int_to_str(wm_churn)), EL_STR(",\"wm_top0_wm\":")), wm_top0_wm), EL_STR(",\"sync_added_total\":")), sat_str), EL_STR(",\"sync_age_ms\":")), int_to_str(sync_age)), EL_STR(",\"wm_avg_weight\":")), wm_avg_str), EL_STR(",\"wm_top\":")), wm_top), EL_STR(",\"ts\":")), int_to_str(ts)), EL_STR(",\"uptime_ms\":")), int_to_str(up_ms)), EL_STR(",\"uptime\":\"")), up_human), EL_STR("\",\"embed_ok\":")), int_to_str(emb_ok)), EL_STR(",\"embed_backfilled\":")), bf_done), EL_STR(",\"embed_count\":")), bf_total), EL_STR(",\"embed_eligible\":")), embed_elig), EL_STR(",\"wm_evicted\":")), act_evict), EL_STR(",\"wm_evicted_delta\":")), int_to_str(evict_delta)), EL_STR(",\"breakthroughs\":")), act_bt), EL_STR(",\"breakthroughs_delta\":")), int_to_str(bt_delta)), EL_STR(",\"auto_term_streak\":")), int_to_str(hb_ats)), EL_STR(",\"embed_breaker_open\":")), act_brk), EL_STR(",\"ctx_cos\":")), ctx_cos), EL_STR(",\"ise_fail\":")), fail_str), EL_STR("}"));
ise_post(payload);
return 0;
@@ -367,14 +374,14 @@ el_val_t proactive_curiosity(void) {
auto_term_try_slot(json_get(wm10_n1, EL_STR("node_type")), json_get(wm10_n1, EL_STR("label")));
auto_term_try_slot(json_get(wm10_n0, EL_STR("node_type")), json_get(wm10_n0, EL_STR("label")));
el_val_t auto_term = state_get(EL_STR("cseed_auto"));
el_val_t results_auto = ({ el_val_t _if_result_45 = 0; if (str_eq(auto_term, EL_STR(""))) { _if_result_45 = (EL_STR("[]")); } else { _if_result_45 = (engram_activate_json(auto_term, 1)); } _if_result_45; });
el_val_t results_auto = ({ el_val_t _if_result_47 = 0; if (str_eq(auto_term, EL_STR(""))) { _if_result_47 = (EL_STR("[]")); } else { _if_result_47 = (engram_activate_json(auto_term, 1)); } _if_result_47; });
el_val_t found_auto = json_array_len(results_auto);
el_val_t total_found = (found + found_auto);
el_val_t safe_auto = str_replace(auto_term, EL_STR("\""), EL_STR("'"));
el_val_t prev_auto = state_get(EL_STR("soul.prev_auto_term"));
el_val_t atstreak_raw = state_get(EL_STR("soul.auto_term_streak"));
el_val_t atstreak_prev = ({ el_val_t _if_result_46 = 0; if (str_eq(atstreak_raw, EL_STR(""))) { _if_result_46 = (0); } else { _if_result_46 = (str_to_int(atstreak_raw)); } _if_result_46; });
el_val_t atstreak = ({ el_val_t _if_result_47 = 0; if (str_eq(auto_term, prev_auto)) { _if_result_47 = ((atstreak_prev + 1)); } else { _if_result_47 = (1); } _if_result_47; });
el_val_t atstreak_prev = ({ el_val_t _if_result_48 = 0; if (str_eq(atstreak_raw, EL_STR(""))) { _if_result_48 = (0); } else { _if_result_48 = (str_to_int(atstreak_raw)); } _if_result_48; });
el_val_t atstreak = ({ el_val_t _if_result_49 = 0; if (str_eq(auto_term, prev_auto)) { _if_result_49 = ((atstreak_prev + 1)); } else { _if_result_49 = (1); } _if_result_49; });
state_set(EL_STR("soul.prev_auto_term"), auto_term);
state_set(EL_STR("soul.auto_term_streak"), int_to_str(atstreak));
if (!str_eq(auto_term, EL_STR(""))) {
@@ -568,16 +575,16 @@ el_val_t awareness_run(void) {
state_set(EL_STR("soul.boot_ts"), int_to_str(time_now()));
}
el_val_t tick_raw = env(EL_STR("SOUL_TICK_MS"));
el_val_t tick_ms = ({ el_val_t _if_result_48 = 0; if (str_eq(tick_raw, EL_STR(""))) { _if_result_48 = (200); } else { _if_result_48 = (str_to_int(tick_raw)); } _if_result_48; });
el_val_t tick_ms = ({ el_val_t _if_result_50 = 0; if (str_eq(tick_raw, EL_STR(""))) { _if_result_50 = (200); } else { _if_result_50 = (str_to_int(tick_raw)); } _if_result_50; });
el_val_t beat_ms_raw = env(EL_STR("SOUL_HEARTBEAT_MS"));
el_val_t beat_ms = ({ el_val_t _if_result_49 = 0; if (str_eq(beat_ms_raw, EL_STR(""))) { _if_result_49 = (60000); } else { _if_result_49 = (str_to_int(beat_ms_raw)); } _if_result_49; });
el_val_t beat_ms = ({ el_val_t _if_result_51 = 0; if (str_eq(beat_ms_raw, EL_STR(""))) { _if_result_51 = (60000); } else { _if_result_51 = (str_to_int(beat_ms_raw)); } _if_result_51; });
el_val_t scan_ms = (beat_ms / 2);
while (1) {
el_val_t tick_mark = el_arena_push();
el_val_t running = state_get(EL_STR("soul.running"));
if (str_eq(running, EL_STR("false"))) {
el_val_t sd_boot_raw = state_get(EL_STR("soul_boot_count"));
el_val_t sd_boot = ({ el_val_t _if_result_50 = 0; if (str_eq(sd_boot_raw, EL_STR(""))) { _if_result_50 = (EL_STR("0")); } else { _if_result_50 = (sd_boot_raw); } _if_result_50; });
el_val_t sd_boot = ({ el_val_t _if_result_52 = 0; if (str_eq(sd_boot_raw, EL_STR(""))) { _if_result_52 = (EL_STR("0")); } else { _if_result_52 = (sd_boot_raw); } _if_result_52; });
ise_post(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(EL_STR("{\"event\":\"shutdown\",\"boot\":"), sd_boot), EL_STR(",\"pulse\":")), int_to_str(pulse_count())), EL_STR(",\"uptime_ms\":")), int_to_str(elapsed_ms())), EL_STR(",\"ts\":")), int_to_str(time_now())), EL_STR("}")));
println(EL_STR("[awareness] exiting"));
el_arena_pop(tick_mark);
@@ -593,7 +600,7 @@ el_val_t awareness_run(void) {
}
el_val_t now_ts = time_now();
el_val_t last_beat_str = state_get(EL_STR("soul.last_beat_ts"));
el_val_t last_beat_ts = ({ el_val_t _if_result_51 = 0; if (str_eq(last_beat_str, EL_STR(""))) { _if_result_51 = (0); } else { _if_result_51 = (str_to_int(last_beat_str)); } _if_result_51; });
el_val_t last_beat_ts = ({ el_val_t _if_result_53 = 0; if (str_eq(last_beat_str, EL_STR(""))) { _if_result_53 = (0); } else { _if_result_53 = (str_to_int(last_beat_str)); } _if_result_53; });
el_val_t beat_elapsed = (now_ts - last_beat_ts);
el_val_t should_beat = (beat_elapsed >= beat_ms);
if (should_beat) {
@@ -605,7 +612,7 @@ el_val_t awareness_run(void) {
}
}
el_val_t last_scan_str = state_get(EL_STR("soul.last_scan_ts"));
el_val_t last_scan_ts = ({ el_val_t _if_result_52 = 0; if (str_eq(last_scan_str, EL_STR(""))) { _if_result_52 = (0); } else { _if_result_52 = (str_to_int(last_scan_str)); } _if_result_52; });
el_val_t last_scan_ts = ({ el_val_t _if_result_54 = 0; if (str_eq(last_scan_str, EL_STR(""))) { _if_result_54 = (0); } else { _if_result_54 = (str_to_int(last_scan_str)); } _if_result_54; });
el_val_t scan_elapsed = (now_ts - last_scan_ts);
el_val_t should_scan = (!did_work && (scan_elapsed >= scan_ms));
if (should_scan) {
@@ -613,15 +620,15 @@ el_val_t awareness_run(void) {
state_set(EL_STR("soul.last_scan_ts"), int_to_str(now_ts));
}
el_val_t refresh_ms_raw = env(EL_STR("SOUL_REFRESH_MS"));
el_val_t refresh_ms = ({ el_val_t _if_result_53 = 0; if (str_eq(refresh_ms_raw, EL_STR(""))) { _if_result_53 = (600000); } else { _if_result_53 = (str_to_int(refresh_ms_raw)); } _if_result_53; });
el_val_t refresh_ms = ({ el_val_t _if_result_55 = 0; if (str_eq(refresh_ms_raw, EL_STR(""))) { _if_result_55 = (600000); } else { _if_result_55 = (str_to_int(refresh_ms_raw)); } _if_result_55; });
el_val_t last_refresh_str = state_get(EL_STR("soul.last_refresh_ts"));
el_val_t last_refresh_ts = ({ el_val_t _if_result_54 = 0; if (str_eq(last_refresh_str, EL_STR(""))) { _if_result_54 = (0); } else { _if_result_54 = (str_to_int(last_refresh_str)); } _if_result_54; });
el_val_t last_refresh_ts = ({ el_val_t _if_result_56 = 0; if (str_eq(last_refresh_str, EL_STR(""))) { _if_result_56 = (0); } else { _if_result_56 = (str_to_int(last_refresh_str)); } _if_result_56; });
el_val_t refresh_elapsed = (now_ts - last_refresh_ts);
el_val_t should_refresh = (refresh_elapsed >= refresh_ms);
if (should_refresh) {
el_val_t sync_env_url = env(EL_STR("SOUL_ISE_URL"));
el_val_t sync_state_url = ({ el_val_t _if_result_55 = 0; if (str_eq(sync_env_url, EL_STR(""))) { _if_result_55 = (state_get(EL_STR("soul_engram_url"))); } else { _if_result_55 = (sync_env_url); } _if_result_55; });
el_val_t engram_url = ({ el_val_t _if_result_56 = 0; if (str_eq(sync_state_url, EL_STR(""))) { _if_result_56 = (EL_STR("http://localhost:8742")); } else { _if_result_56 = (sync_state_url); } _if_result_56; });
el_val_t sync_state_url = ({ el_val_t _if_result_57 = 0; if (str_eq(sync_env_url, EL_STR(""))) { _if_result_57 = (state_get(EL_STR("soul_engram_url"))); } else { _if_result_57 = (sync_env_url); } _if_result_57; });
el_val_t engram_url = ({ el_val_t _if_result_58 = 0; if (str_eq(sync_state_url, EL_STR(""))) { _if_result_58 = (EL_STR("http://localhost:8742")); } else { _if_result_58 = (sync_state_url); } _if_result_58; });
if (!str_eq(engram_url, EL_STR(""))) {
el_val_t sync_json = http_get(el_str_concat(engram_url, EL_STR("/api/sync")));
el_val_t sync_ok = (!str_eq(sync_json, EL_STR("")) && !str_eq(sync_json, EL_STR("{}")));
@@ -634,10 +641,10 @@ el_val_t awareness_run(void) {
fs_write(tmp, sync_json);
el_val_t added = engram_load_merge(tmp);
el_val_t ret_raw = env(EL_STR("ENGRAM_ISE_RETENTION_MS"));
el_val_t ret_ms = ({ el_val_t _if_result_57 = 0; if (str_eq(ret_raw, EL_STR(""))) { _if_result_57 = (172800000); } else { _if_result_57 = (str_to_int(ret_raw)); } _if_result_57; });
el_val_t ret_ms = ({ el_val_t _if_result_59 = 0; if (str_eq(ret_raw, EL_STR(""))) { _if_result_59 = (172800000); } else { _if_result_59 = (str_to_int(ret_raw)); } _if_result_59; });
el_val_t pruned_sync = engram_prune_telemetry(ret_ms);
el_val_t sat_raw = state_get(EL_STR("soul.sync_added_total"));
el_val_t sat_n = ({ el_val_t _if_result_58 = 0; if (str_eq(sat_raw, EL_STR(""))) { _if_result_58 = (0); } else { _if_result_58 = (str_to_int(sat_raw)); } _if_result_58; });
el_val_t sat_n = ({ el_val_t _if_result_60 = 0; if (str_eq(sat_raw, EL_STR(""))) { _if_result_60 = (0); } else { _if_result_60 = (str_to_int(sat_raw)); } _if_result_60; });
state_set(EL_STR("soul.sync_added_total"), int_to_str((sat_n + added)));
el_val_t ts2 = time_now();
state_set(EL_STR("soul.last_sync_ok_ts"), int_to_str(ts2));
@@ -663,78 +670,78 @@ el_val_t security_research_authorized(void) {
}
el_val_t threat_score_command(el_val_t cmd) {
el_val_t s1 = ({ el_val_t _if_result_59 = 0; if (str_contains(cmd, EL_STR("nmap"))) { _if_result_59 = (30); } else { _if_result_59 = (0); } _if_result_59; });
el_val_t s2 = ({ el_val_t _if_result_60 = 0; if (str_contains(cmd, EL_STR("masscan"))) { _if_result_60 = (40); } else { _if_result_60 = (0); } _if_result_60; });
el_val_t s3 = ({ el_val_t _if_result_61 = 0; if (str_contains(cmd, EL_STR(" nc "))) { _if_result_61 = (20); } else { _if_result_61 = (0); } _if_result_61; });
el_val_t s4 = ({ el_val_t _if_result_62 = 0; if (str_contains(cmd, EL_STR("netcat"))) { _if_result_62 = (20); } else { _if_result_62 = (0); } _if_result_62; });
el_val_t s5 = ({ el_val_t _if_result_63 = 0; if (str_contains(cmd, EL_STR("/etc/shadow"))) { _if_result_63 = (80); } else { _if_result_63 = (0); } _if_result_63; });
el_val_t s6 = ({ el_val_t _if_result_64 = 0; if (str_contains(cmd, EL_STR("/etc/passwd"))) { _if_result_64 = (30); } else { _if_result_64 = (0); } _if_result_64; });
el_val_t s7 = ({ el_val_t _if_result_65 = 0; if (str_contains(cmd, EL_STR("id_rsa"))) { _if_result_65 = (60); } else { _if_result_65 = (0); } _if_result_65; });
el_val_t s8 = ({ el_val_t _if_result_66 = 0; if (str_contains(cmd, EL_STR(".ssh/"))) { _if_result_66 = (50); } else { _if_result_66 = (0); } _if_result_66; });
el_val_t s9 = ({ el_val_t _if_result_67 = 0; if (str_contains(cmd, EL_STR("crontab"))) { _if_result_67 = (30); } else { _if_result_67 = (0); } _if_result_67; });
el_val_t s10 = ({ el_val_t _if_result_68 = 0; if (str_contains(cmd, EL_STR("LaunchDaemon"))) { _if_result_68 = (40); } else { _if_result_68 = (0); } _if_result_68; });
el_val_t s11 = ({ el_val_t _if_result_69 = 0; if ((str_contains(cmd, EL_STR("curl")) && str_contains(cmd, EL_STR("bash")))) { _if_result_69 = (75); } else { _if_result_69 = (0); } _if_result_69; });
el_val_t s12 = ({ el_val_t _if_result_70 = 0; if ((str_contains(cmd, EL_STR("wget")) && str_contains(cmd, EL_STR("bash")))) { _if_result_70 = (75); } else { _if_result_70 = (0); } _if_result_70; });
el_val_t s13 = ({ el_val_t _if_result_71 = 0; if ((str_contains(cmd, EL_STR("curl")) && str_contains(cmd, EL_STR("| sh")))) { _if_result_71 = (60); } else { _if_result_71 = (0); } _if_result_71; });
el_val_t s14 = ({ el_val_t _if_result_72 = 0; if ((str_contains(cmd, EL_STR("base64")) && str_contains(cmd, EL_STR("curl")))) { _if_result_72 = (50); } else { _if_result_72 = (0); } _if_result_72; });
el_val_t s15 = ({ el_val_t _if_result_73 = 0; if (str_contains(cmd, EL_STR("mkfifo"))) { _if_result_73 = (50); } else { _if_result_73 = (0); } _if_result_73; });
el_val_t s16 = ({ el_val_t _if_result_74 = 0; if (str_contains(cmd, EL_STR("chmod +s"))) { _if_result_74 = (70); } else { _if_result_74 = (0); } _if_result_74; });
el_val_t s17 = ({ el_val_t _if_result_75 = 0; if (str_contains(cmd, EL_STR("chmod 4755"))) { _if_result_75 = (70); } else { _if_result_75 = (0); } _if_result_75; });
el_val_t s1 = ({ el_val_t _if_result_61 = 0; if (str_contains(cmd, EL_STR("nmap"))) { _if_result_61 = (30); } else { _if_result_61 = (0); } _if_result_61; });
el_val_t s2 = ({ el_val_t _if_result_62 = 0; if (str_contains(cmd, EL_STR("masscan"))) { _if_result_62 = (40); } else { _if_result_62 = (0); } _if_result_62; });
el_val_t s3 = ({ el_val_t _if_result_63 = 0; if (str_contains(cmd, EL_STR(" nc "))) { _if_result_63 = (20); } else { _if_result_63 = (0); } _if_result_63; });
el_val_t s4 = ({ el_val_t _if_result_64 = 0; if (str_contains(cmd, EL_STR("netcat"))) { _if_result_64 = (20); } else { _if_result_64 = (0); } _if_result_64; });
el_val_t s5 = ({ el_val_t _if_result_65 = 0; if (str_contains(cmd, EL_STR("/etc/shadow"))) { _if_result_65 = (80); } else { _if_result_65 = (0); } _if_result_65; });
el_val_t s6 = ({ el_val_t _if_result_66 = 0; if (str_contains(cmd, EL_STR("/etc/passwd"))) { _if_result_66 = (30); } else { _if_result_66 = (0); } _if_result_66; });
el_val_t s7 = ({ el_val_t _if_result_67 = 0; if (str_contains(cmd, EL_STR("id_rsa"))) { _if_result_67 = (60); } else { _if_result_67 = (0); } _if_result_67; });
el_val_t s8 = ({ el_val_t _if_result_68 = 0; if (str_contains(cmd, EL_STR(".ssh/"))) { _if_result_68 = (50); } else { _if_result_68 = (0); } _if_result_68; });
el_val_t s9 = ({ el_val_t _if_result_69 = 0; if (str_contains(cmd, EL_STR("crontab"))) { _if_result_69 = (30); } else { _if_result_69 = (0); } _if_result_69; });
el_val_t s10 = ({ el_val_t _if_result_70 = 0; if (str_contains(cmd, EL_STR("LaunchDaemon"))) { _if_result_70 = (40); } else { _if_result_70 = (0); } _if_result_70; });
el_val_t s11 = ({ el_val_t _if_result_71 = 0; if ((str_contains(cmd, EL_STR("curl")) && str_contains(cmd, EL_STR("bash")))) { _if_result_71 = (75); } else { _if_result_71 = (0); } _if_result_71; });
el_val_t s12 = ({ el_val_t _if_result_72 = 0; if ((str_contains(cmd, EL_STR("wget")) && str_contains(cmd, EL_STR("bash")))) { _if_result_72 = (75); } else { _if_result_72 = (0); } _if_result_72; });
el_val_t s13 = ({ el_val_t _if_result_73 = 0; if ((str_contains(cmd, EL_STR("curl")) && str_contains(cmd, EL_STR("| sh")))) { _if_result_73 = (60); } else { _if_result_73 = (0); } _if_result_73; });
el_val_t s14 = ({ el_val_t _if_result_74 = 0; if ((str_contains(cmd, EL_STR("base64")) && str_contains(cmd, EL_STR("curl")))) { _if_result_74 = (50); } else { _if_result_74 = (0); } _if_result_74; });
el_val_t s15 = ({ el_val_t _if_result_75 = 0; if (str_contains(cmd, EL_STR("mkfifo"))) { _if_result_75 = (50); } else { _if_result_75 = (0); } _if_result_75; });
el_val_t s16 = ({ el_val_t _if_result_76 = 0; if (str_contains(cmd, EL_STR("chmod +s"))) { _if_result_76 = (70); } else { _if_result_76 = (0); } _if_result_76; });
el_val_t s17 = ({ el_val_t _if_result_77 = 0; if (str_contains(cmd, EL_STR("chmod 4755"))) { _if_result_77 = (70); } else { _if_result_77 = (0); } _if_result_77; });
return ((((((((((((((((s1 + s2) + s3) + s4) + s5) + s6) + s7) + s8) + s9) + s10) + s11) + s12) + s13) + s14) + s15) + s16) + s17);
return 0;
}
el_val_t threat_score_path(el_val_t path) {
el_val_t s1 = ({ el_val_t _if_result_76 = 0; if (str_starts_with(path, EL_STR("/etc/"))) { _if_result_76 = (60); } else { _if_result_76 = (0); } _if_result_76; });
el_val_t s2 = ({ el_val_t _if_result_77 = 0; if (str_contains(path, EL_STR("/.ssh/"))) { _if_result_77 = (70); } else { _if_result_77 = (0); } _if_result_77; });
el_val_t s3 = ({ el_val_t _if_result_78 = 0; if (str_contains(path, EL_STR("/LaunchDaemons/"))) { _if_result_78 = (80); } else { _if_result_78 = (0); } _if_result_78; });
el_val_t s4 = ({ el_val_t _if_result_79 = 0; if (str_contains(path, EL_STR("/LaunchAgents/"))) { _if_result_79 = (40); } else { _if_result_79 = (0); } _if_result_79; });
el_val_t s5 = ({ el_val_t _if_result_80 = 0; if (str_contains(path, EL_STR("/cron"))) { _if_result_80 = (60); } else { _if_result_80 = (0); } _if_result_80; });
el_val_t s6 = ({ el_val_t _if_result_81 = 0; if (str_contains(path, EL_STR("/.bashrc"))) { _if_result_81 = (35); } else { _if_result_81 = (0); } _if_result_81; });
el_val_t s7 = ({ el_val_t _if_result_82 = 0; if (str_contains(path, EL_STR("/.zshrc"))) { _if_result_82 = (35); } else { _if_result_82 = (0); } _if_result_82; });
el_val_t s8 = ({ el_val_t _if_result_83 = 0; if (str_contains(path, EL_STR("/.profile"))) { _if_result_83 = (35); } else { _if_result_83 = (0); } _if_result_83; });
el_val_t s9 = ({ el_val_t _if_result_84 = 0; if (str_starts_with(path, EL_STR("/usr/"))) { _if_result_84 = (50); } else { _if_result_84 = (0); } _if_result_84; });
el_val_t s10 = ({ el_val_t _if_result_85 = 0; if (str_starts_with(path, EL_STR("/bin/"))) { _if_result_85 = (70); } else { _if_result_85 = (0); } _if_result_85; });
el_val_t s11 = ({ el_val_t _if_result_86 = 0; if (str_starts_with(path, EL_STR("/sbin/"))) { _if_result_86 = (70); } else { _if_result_86 = (0); } _if_result_86; });
el_val_t s1 = ({ el_val_t _if_result_78 = 0; if (str_starts_with(path, EL_STR("/etc/"))) { _if_result_78 = (60); } else { _if_result_78 = (0); } _if_result_78; });
el_val_t s2 = ({ el_val_t _if_result_79 = 0; if (str_contains(path, EL_STR("/.ssh/"))) { _if_result_79 = (70); } else { _if_result_79 = (0); } _if_result_79; });
el_val_t s3 = ({ el_val_t _if_result_80 = 0; if (str_contains(path, EL_STR("/LaunchDaemons/"))) { _if_result_80 = (80); } else { _if_result_80 = (0); } _if_result_80; });
el_val_t s4 = ({ el_val_t _if_result_81 = 0; if (str_contains(path, EL_STR("/LaunchAgents/"))) { _if_result_81 = (40); } else { _if_result_81 = (0); } _if_result_81; });
el_val_t s5 = ({ el_val_t _if_result_82 = 0; if (str_contains(path, EL_STR("/cron"))) { _if_result_82 = (60); } else { _if_result_82 = (0); } _if_result_82; });
el_val_t s6 = ({ el_val_t _if_result_83 = 0; if (str_contains(path, EL_STR("/.bashrc"))) { _if_result_83 = (35); } else { _if_result_83 = (0); } _if_result_83; });
el_val_t s7 = ({ el_val_t _if_result_84 = 0; if (str_contains(path, EL_STR("/.zshrc"))) { _if_result_84 = (35); } else { _if_result_84 = (0); } _if_result_84; });
el_val_t s8 = ({ el_val_t _if_result_85 = 0; if (str_contains(path, EL_STR("/.profile"))) { _if_result_85 = (35); } else { _if_result_85 = (0); } _if_result_85; });
el_val_t s9 = ({ el_val_t _if_result_86 = 0; if (str_starts_with(path, EL_STR("/usr/"))) { _if_result_86 = (50); } else { _if_result_86 = (0); } _if_result_86; });
el_val_t s10 = ({ el_val_t _if_result_87 = 0; if (str_starts_with(path, EL_STR("/bin/"))) { _if_result_87 = (70); } else { _if_result_87 = (0); } _if_result_87; });
el_val_t s11 = ({ el_val_t _if_result_88 = 0; if (str_starts_with(path, EL_STR("/sbin/"))) { _if_result_88 = (70); } else { _if_result_88 = (0); } _if_result_88; });
return ((((((((((s1 + s2) + s3) + s4) + s5) + s6) + s7) + s8) + s9) + s10) + s11);
return 0;
}
el_val_t threat_score_history(el_val_t history) {
el_val_t s1 = ({ el_val_t _if_result_87 = 0; if (str_contains(history, EL_STR("port scan"))) { _if_result_87 = (15); } else { _if_result_87 = (0); } _if_result_87; });
el_val_t s2 = ({ el_val_t _if_result_88 = 0; if (str_contains(history, EL_STR("enumerate"))) { _if_result_88 = (10); } else { _if_result_88 = (0); } _if_result_88; });
el_val_t s3 = ({ el_val_t _if_result_89 = 0; if (str_contains(history, EL_STR("exploit"))) { _if_result_89 = (20); } else { _if_result_89 = (0); } _if_result_89; });
el_val_t s4 = ({ el_val_t _if_result_90 = 0; if (str_contains(history, EL_STR("payload"))) { _if_result_90 = (15); } else { _if_result_90 = (0); } _if_result_90; });
el_val_t s5 = ({ el_val_t _if_result_91 = 0; if (str_contains(history, EL_STR("persistence"))) { _if_result_91 = (15); } else { _if_result_91 = (0); } _if_result_91; });
el_val_t s6 = ({ el_val_t _if_result_92 = 0; if (str_contains(history, EL_STR("lateral movement"))) { _if_result_92 = (25); } else { _if_result_92 = (0); } _if_result_92; });
el_val_t s7 = ({ el_val_t _if_result_93 = 0; if (str_contains(history, EL_STR("privilege escalation"))) { _if_result_93 = (25); } else { _if_result_93 = (0); } _if_result_93; });
el_val_t s8 = ({ el_val_t _if_result_94 = 0; if (str_contains(history, EL_STR("reverse shell"))) { _if_result_94 = (40); } else { _if_result_94 = (0); } _if_result_94; });
el_val_t s9 = ({ el_val_t _if_result_95 = 0; if (str_contains(history, EL_STR("bind shell"))) { _if_result_95 = (40); } else { _if_result_95 = (0); } _if_result_95; });
el_val_t s10 = ({ el_val_t _if_result_96 = 0; if (str_contains(history, EL_STR("command and control"))) { _if_result_96 = (35); } else { _if_result_96 = (0); } _if_result_96; });
el_val_t s11 = ({ el_val_t _if_result_97 = 0; if (str_contains(history, EL_STR("self-replicate"))) { _if_result_97 = (45); } else { _if_result_97 = (0); } _if_result_97; });
el_val_t s12 = ({ el_val_t _if_result_98 = 0; if (str_contains(history, EL_STR("propagat"))) { _if_result_98 = (20); } else { _if_result_98 = (0); } _if_result_98; });
el_val_t s13 = ({ el_val_t _if_result_99 = 0; if (str_contains(history, EL_STR("ransomware"))) { _if_result_99 = (30); } else { _if_result_99 = (0); } _if_result_99; });
el_val_t s14 = ({ el_val_t _if_result_100 = 0; if (str_contains(history, EL_STR("encrypt files"))) { _if_result_100 = (40); } else { _if_result_100 = (0); } _if_result_100; });
el_val_t s15 = ({ el_val_t _if_result_101 = 0; if (str_contains(history, EL_STR("exfiltrat"))) { _if_result_101 = (35); } else { _if_result_101 = (0); } _if_result_101; });
el_val_t s16 = ({ el_val_t _if_result_102 = 0; if (str_contains(history, EL_STR("zero-day"))) { _if_result_102 = (20); } else { _if_result_102 = (0); } _if_result_102; });
el_val_t s17 = ({ el_val_t _if_result_103 = 0; if (str_contains(history, EL_STR("rootkit"))) { _if_result_103 = (45); } else { _if_result_103 = (0); } _if_result_103; });
el_val_t s18 = ({ el_val_t _if_result_104 = 0; if (str_contains(history, EL_STR("keylogger"))) { _if_result_104 = (45); } else { _if_result_104 = (0); } _if_result_104; });
el_val_t s19 = ({ el_val_t _if_result_105 = 0; if (str_contains(history, EL_STR("botnet"))) { _if_result_105 = (40); } else { _if_result_105 = (0); } _if_result_105; });
el_val_t s20 = ({ el_val_t _if_result_106 = 0; if (str_contains(history, EL_STR("malware"))) { _if_result_106 = (15); } else { _if_result_106 = (0); } _if_result_106; });
el_val_t s1 = ({ el_val_t _if_result_89 = 0; if (str_contains(history, EL_STR("port scan"))) { _if_result_89 = (15); } else { _if_result_89 = (0); } _if_result_89; });
el_val_t s2 = ({ el_val_t _if_result_90 = 0; if (str_contains(history, EL_STR("enumerate"))) { _if_result_90 = (10); } else { _if_result_90 = (0); } _if_result_90; });
el_val_t s3 = ({ el_val_t _if_result_91 = 0; if (str_contains(history, EL_STR("exploit"))) { _if_result_91 = (20); } else { _if_result_91 = (0); } _if_result_91; });
el_val_t s4 = ({ el_val_t _if_result_92 = 0; if (str_contains(history, EL_STR("payload"))) { _if_result_92 = (15); } else { _if_result_92 = (0); } _if_result_92; });
el_val_t s5 = ({ el_val_t _if_result_93 = 0; if (str_contains(history, EL_STR("persistence"))) { _if_result_93 = (15); } else { _if_result_93 = (0); } _if_result_93; });
el_val_t s6 = ({ el_val_t _if_result_94 = 0; if (str_contains(history, EL_STR("lateral movement"))) { _if_result_94 = (25); } else { _if_result_94 = (0); } _if_result_94; });
el_val_t s7 = ({ el_val_t _if_result_95 = 0; if (str_contains(history, EL_STR("privilege escalation"))) { _if_result_95 = (25); } else { _if_result_95 = (0); } _if_result_95; });
el_val_t s8 = ({ el_val_t _if_result_96 = 0; if (str_contains(history, EL_STR("reverse shell"))) { _if_result_96 = (40); } else { _if_result_96 = (0); } _if_result_96; });
el_val_t s9 = ({ el_val_t _if_result_97 = 0; if (str_contains(history, EL_STR("bind shell"))) { _if_result_97 = (40); } else { _if_result_97 = (0); } _if_result_97; });
el_val_t s10 = ({ el_val_t _if_result_98 = 0; if (str_contains(history, EL_STR("command and control"))) { _if_result_98 = (35); } else { _if_result_98 = (0); } _if_result_98; });
el_val_t s11 = ({ el_val_t _if_result_99 = 0; if (str_contains(history, EL_STR("self-replicate"))) { _if_result_99 = (45); } else { _if_result_99 = (0); } _if_result_99; });
el_val_t s12 = ({ el_val_t _if_result_100 = 0; if (str_contains(history, EL_STR("propagat"))) { _if_result_100 = (20); } else { _if_result_100 = (0); } _if_result_100; });
el_val_t s13 = ({ el_val_t _if_result_101 = 0; if (str_contains(history, EL_STR("ransomware"))) { _if_result_101 = (30); } else { _if_result_101 = (0); } _if_result_101; });
el_val_t s14 = ({ el_val_t _if_result_102 = 0; if (str_contains(history, EL_STR("encrypt files"))) { _if_result_102 = (40); } else { _if_result_102 = (0); } _if_result_102; });
el_val_t s15 = ({ el_val_t _if_result_103 = 0; if (str_contains(history, EL_STR("exfiltrat"))) { _if_result_103 = (35); } else { _if_result_103 = (0); } _if_result_103; });
el_val_t s16 = ({ el_val_t _if_result_104 = 0; if (str_contains(history, EL_STR("zero-day"))) { _if_result_104 = (20); } else { _if_result_104 = (0); } _if_result_104; });
el_val_t s17 = ({ el_val_t _if_result_105 = 0; if (str_contains(history, EL_STR("rootkit"))) { _if_result_105 = (45); } else { _if_result_105 = (0); } _if_result_105; });
el_val_t s18 = ({ el_val_t _if_result_106 = 0; if (str_contains(history, EL_STR("keylogger"))) { _if_result_106 = (45); } else { _if_result_106 = (0); } _if_result_106; });
el_val_t s19 = ({ el_val_t _if_result_107 = 0; if (str_contains(history, EL_STR("botnet"))) { _if_result_107 = (40); } else { _if_result_107 = (0); } _if_result_107; });
el_val_t s20 = ({ el_val_t _if_result_108 = 0; if (str_contains(history, EL_STR("malware"))) { _if_result_108 = (15); } else { _if_result_108 = (0); } _if_result_108; });
return (((((((((((((((((((s1 + s2) + s3) + s4) + s5) + s6) + s7) + s8) + s9) + s10) + s11) + s12) + s13) + s14) + s15) + s16) + s17) + s18) + s19) + s20);
return 0;
}
el_val_t threat_trajectory_check(el_val_t tool_name, el_val_t tool_input) {
el_val_t history = state_get(EL_STR("agentic_conv_history"));
el_val_t computed_tool_score = ({ el_val_t _if_result_107 = 0; if (str_eq(tool_name, EL_STR("run_command"))) { el_val_t cmd = json_get(tool_input, EL_STR("command")); _if_result_107 = (threat_score_command(cmd)); } else { _if_result_107 = (({ el_val_t _if_result_108 = 0; if ((str_eq(tool_name, EL_STR("write_file")) || str_eq(tool_name, EL_STR("edit_file")))) { el_val_t path = json_get(tool_input, EL_STR("path")); _if_result_108 = (threat_score_path(path)); } else { _if_result_108 = (0); } _if_result_108; })); } _if_result_107; });
el_val_t computed_tool_score = ({ el_val_t _if_result_109 = 0; if (str_eq(tool_name, EL_STR("run_command"))) { el_val_t cmd = json_get(tool_input, EL_STR("command")); _if_result_109 = (threat_score_command(cmd)); } else { _if_result_109 = (({ el_val_t _if_result_110 = 0; if ((str_eq(tool_name, EL_STR("write_file")) || str_eq(tool_name, EL_STR("edit_file")))) { el_val_t path = json_get(tool_input, EL_STR("path")); _if_result_110 = (threat_score_path(path)); } else { _if_result_110 = (0); } _if_result_110; })); } _if_result_109; });
el_val_t history_score = threat_score_history(history);
el_val_t history_contrib = (history_score / 3);
el_val_t combined = (computed_tool_score + history_contrib);
el_val_t should_log = (combined >= 40);
if (should_log) {
el_val_t ts = time_now();
el_val_t authorized_str = ({ el_val_t _if_result_109 = 0; if (security_research_authorized()) { _if_result_109 = (EL_STR("true")); } else { _if_result_109 = (EL_STR("false")); } _if_result_109; });
el_val_t authorized_str = ({ el_val_t _if_result_111 = 0; if (security_research_authorized()) { _if_result_111 = (EL_STR("true")); } else { _if_result_111 = (EL_STR("false")); } _if_result_111; });
el_val_t log_content = el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(el_str_concat(EL_STR("{\"event\":\"threat_check\",\"tool\":\""), tool_name), EL_STR("\",\"score\":")), int_to_str(combined)), EL_STR(",\"tool_score\":")), int_to_str(computed_tool_score)), EL_STR(",\"history_score\":")), int_to_str(history_score)), EL_STR(",\"authorized\":")), authorized_str), EL_STR(",\"ts\":")), int_to_str(ts)), EL_STR("}"));
el_val_t log_tags = EL_STR("[\"security-audit\",\"threat-check\"]");
el_val_t discard = mem_remember(log_content, log_tags);
@@ -751,7 +758,7 @@ el_val_t threat_history_append(el_val_t text) {
el_val_t safe_text = str_to_lower(text);
el_val_t combined = el_str_concat(el_str_concat(current, EL_STR(" ")), safe_text);
el_val_t len = str_len(combined);
el_val_t trimmed = ({ el_val_t _if_result_110 = 0; if ((len > 2000)) { _if_result_110 = (str_slice(combined, (len - 2000), len)); } else { _if_result_110 = (combined); } _if_result_110; });
el_val_t trimmed = ({ el_val_t _if_result_112 = 0; if ((len > 2000)) { _if_result_112 = (str_slice(combined, (len - 2000), len)); } else { _if_result_112 = (combined); } _if_result_112; });
state_set(EL_STR("agentic_conv_history"), trimmed);
return 0;
}
Generated Vendored
+17 -3
View File
@@ -5,6 +5,15 @@ el_val_t add_punct(el_val_t s, el_val_t intent);
el_val_t add_to_seen(el_val_t seen, el_val_t node_id);
el_val_t aff_try_slot(el_val_t slot_json, el_val_t aff_7d_ts, el_val_t acc_key);
el_val_t affective_context_prefix(void);
el_val_t is_utility_request(el_val_t body, el_val_t session_id);
el_val_t operator_identity_block(void);
el_val_t provenance_add_sources(el_val_t block, el_val_t btype, el_val_t has_cit, el_val_t cit_raw, el_val_t acc);
el_val_t provenance_names(el_val_t tools_used);
el_val_t provenance_scan_urls(el_val_t arr, el_val_t acc);
el_val_t text_join_sep(el_val_t accumulated, el_val_t incoming, el_val_t after_interruption);
el_val_t receipt_rule(void);
el_val_t receipt_strip(el_val_t s);
el_val_t tool_receipt(el_val_t tools_used, el_val_t sources);
el_val_t agent_number(el_val_t agent);
el_val_t agent_person(el_val_t agent);
el_val_t agent_workspace_root(void);
@@ -151,8 +160,12 @@ el_val_t cmd_abs_escape_at(el_val_t cmd, el_val_t root, el_val_t needle);
el_val_t connectd_get(el_val_t suffix);
el_val_t connectd_post(el_val_t suffix, el_val_t body);
el_val_t connector_tools_json(void);
el_val_t conv_history_load(void);
el_val_t conv_history_persist(el_val_t hist);
el_val_t conv_hist_key(el_val_t session_id);
el_val_t conv_hist_label(el_val_t session_id);
el_val_t conv_history_block(el_val_t session_id);
el_val_t conv_history_load(el_val_t session_id);
el_val_t conv_history_persist(el_val_t session_id, el_val_t hist);
el_val_t conv_history_record(el_val_t session_id, el_val_t user_msg, el_val_t assistant_msg, el_val_t receipt);
el_val_t cop_article(el_val_t gender, el_val_t number, el_val_t definite);
el_val_t cop_bwk_future(el_val_t prefix);
el_val_t cop_bwk_perfect(el_val_t prefix);
@@ -782,7 +795,8 @@ el_val_t lang_profile_uga(void);
el_val_t lang_profile_zh(void);
el_val_t lang_profile(el_val_t code, el_val_t word_order, el_val_t morph_type, el_val_t has_case, el_val_t has_gender, el_val_t script_dir, el_val_t agreement, el_val_t null_subject);
el_val_t lang_word_order(el_val_t profile);
el_val_t layered_cycle(el_val_t raw_input);
el_val_t layered_cycle(el_val_t raw_input, el_val_t session_id, el_val_t utility);
el_val_t layered_generate(el_val_t prompt, el_val_t imprint_id, el_val_t session_id);
el_val_t lex_class(el_val_t entry);
el_val_t lex_form(el_val_t entry, el_val_t idx);
el_val_t lex_pos(el_val_t entry);
Generated Vendored
+5 -7
View File
@@ -10,7 +10,6 @@ el_val_t mem_remember(el_val_t content, el_val_t tags);
el_val_t mem_recall(el_val_t query, el_val_t depth);
el_val_t mem_search(el_val_t query, el_val_t limit);
el_val_t mem_strengthen(el_val_t node_id);
el_val_t mem_tombstone(el_val_t node_id);
el_val_t mem_forget(el_val_t node_id);
el_val_t mem_consolidate(void);
el_val_t mem_save(el_val_t path);
@@ -497,9 +496,8 @@ el_val_t handle_api_capture_knowledge(el_val_t body) {
return api_err(EL_STR("content is required"));
}
el_val_t full = ({ el_val_t _if_result_44 = 0; if (str_eq(title, EL_STR(""))) { _if_result_44 = (content); } else { _if_result_44 = (el_str_concat(el_str_concat(title, EL_STR(": ")), content)); } _if_result_44; });
el_val_t lbl = str_slice(title, 0, 80);
el_val_t tags = EL_STR("[\"Knowledge\",\"captured\"]");
el_val_t id = engram_node_full(full, EL_STR("Knowledge"), lbl, el_from_float(0.85), el_from_float(0.8), el_from_float(0.9), EL_STR("Episodic"), tags);
el_val_t id = engram_node_full(full, EL_STR("Knowledge"), EL_STR("knowledge:captured"), el_from_float(0.85), el_from_float(0.8), el_from_float(0.9), EL_STR("Episodic"), tags);
if (!api_persisted(id)) {
return api_not_persisted(id);
}
@@ -517,7 +515,7 @@ el_val_t handle_api_evolve_knowledge(el_val_t body) {
return api_err_protected(prior_id);
}
el_val_t tags = EL_STR("[\"Knowledge\",\"evolved\"]");
el_val_t new_id = engram_node_full(content, EL_STR("Knowledge"), EL_STR(""), el_from_float(0.75), el_from_float(0.75), el_from_float(0.9), EL_STR("Episodic"), tags);
el_val_t new_id = engram_node_full(content, EL_STR("Knowledge"), EL_STR("knowledge:evolved"), el_from_float(0.75), el_from_float(0.75), el_from_float(0.9), EL_STR("Episodic"), tags);
if (!api_persisted(new_id)) {
return api_not_persisted(new_id);
}
@@ -539,7 +537,7 @@ el_val_t handle_api_promote_knowledge(el_val_t body) {
}
el_val_t tags_raw = json_get(body, EL_STR("tags"));
el_val_t tags = ({ el_val_t _if_result_45 = 0; if (str_eq(tags_raw, EL_STR(""))) { _if_result_45 = (EL_STR("[\"Knowledge\",\"tier:canonical\",\"disposition:stable\"]")); } else { _if_result_45 = (tags_raw); } _if_result_45; });
el_val_t new_id = engram_node_full(content, EL_STR("Knowledge"), EL_STR(""), el_from_float(0.9), el_from_float(0.9), el_from_float(1.0), EL_STR("Canonical"), tags);
el_val_t new_id = engram_node_full(content, EL_STR("Knowledge"), EL_STR("knowledge:canonical"), el_from_float(0.9), el_from_float(0.9), el_from_float(1.0), EL_STR("Canonical"), tags);
if (!api_persisted(new_id)) {
return api_not_persisted(new_id);
}
@@ -828,8 +826,8 @@ el_val_t handle_api_consolidate(el_val_t body) {
el_val_t summary = json_get(body, EL_STR("summary"));
el_val_t snap = state_get(EL_STR("soul_snapshot_path"));
if (!str_eq(snap, EL_STR(""))) {
el_val_t saved = engram_save(snap);
if (saved == 0) {
el_val_t save_result = engram_save(snap);
if (str_eq(save_result, EL_STR(""))) {
println(el_str_concat(el_str_concat(EL_STR("[api] consolidate: engram_save failed for "), snap), EL_STR(" \xe2\x80\x94 snapshot may be out of sync")));
}
}
Generated Vendored
+1 -1
View File
@@ -541,7 +541,7 @@ int main(int _argc, char** _argv) {
axon_raw = env(EL_STR("NEURON_API_URL"));
axon_base = ({ el_val_t _if_result_47 = 0; if (str_eq(axon_raw, EL_STR(""))) { _if_result_47 = (EL_STR("http://localhost:7771")); } else { _if_result_47 = (axon_raw); } _if_result_47; });
studio_dir_raw = env(EL_STR("SOUL_STUDIO_DIR"));
studio_dir = ({ el_val_t _if_result_48 = 0; if (str_eq(studio_dir_raw, EL_STR(""))) { _if_result_48 = (EL_STR("/Users/will/Development/neuron-technologies/products/cgi-studio/el-daemon")); } else { _if_result_48 = (studio_dir_raw); } _if_result_48; });
studio_dir = ({ el_val_t _if_result_48 = 0; if (str_eq(studio_dir_raw, EL_STR(""))) { _if_result_48 = (el_str_concat(env(EL_STR("HOME")), EL_STR("/Development/neuron-technologies/products/cgi-studio/el-daemon"))); } else { _if_result_48 = (studio_dir_raw); } _if_result_48; });
println(el_str_concat(el_str_concat(el_str_concat(EL_STR("[soul] boot - cgi="), soul_cgi_id), EL_STR(" port=")), int_to_str(port)));
using_http_engram = !str_eq(engram_url_raw, EL_STR(""));
engram_load(snapshot);
Generated Vendored
+16 -1
View File
@@ -1,3 +1,18 @@
//
// STALE BUNDLE DO NOT BUILD. UNSAFE CHAT PATH.
//
// This concatenated bundle is a snapshot, not a source of truth, and it is stale in
// a way that matters for safety: it wires /api/chat straight to handle_chat and
// contains NO layered_cycle at all (verified: zero occurrences in the bundled code
// the only textual hit in this file is this banner). A binary built from
// this file would run chat with no enforcing input gate (no safety_screen, no
// hard-bell short-circuit) and no enforcing output gate (no safety_validate).
//
// Build from the .el sources via manifest.el (entry soul.el), or from dist/soul.c.
// Nothing in the repo references this file. It is kept only as a historical artifact
// and should be deleted once Will confirms nothing external depends on it.
// (Flagged 2026-08-04 in _engine-websearch-20260804/SAFETY-STOP.md; banner added
// 2026-08-05 with the plain-chat generation fix.)
// language-profile.el - Language profile data and accessors.
//
// A language profile is a slot map ([String] key-value list) describing the
@@ -21304,7 +21319,7 @@ println("[memory] consolidate stats=" + stats)
let soul_axon_base_raw: String = env("NEURON_API_URL")
let soul_axon_base: String = if str_eq(soul_axon_base_raw, "") { "http://localhost:7771" } else { soul_axon_base_raw }
let soul_token: String = env("NEURON_TOKEN")
let soul_studio_ui_dir: String = "/Users/will/Development/neuron-technologies/products/cgi-studio/el-daemon"
let soul_studio_ui_dir: String = env("HOME") + "/Development/neuron-technologies/products/cgi-studio/el-daemon"
// Runtime bridge helpers
Generated Vendored
+750 -472
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File diff suppressed because one or more lines are too long
@@ -0,0 +1,34 @@
# Narrated runs — engine notes for Will (2026-07-13)
Source half: commit aa67f86 on feat/agent-phase1-soul (run-progress ledger,
`/api/run-progress/<sid>` route, narration on the pause envelope, config display
default). E2E-verified via the compiled test bed on Tim's clean profile.
Compiled-form-only fixes (in `neuron-container-build/soul-narrated-runs-20260713.patch`,
applies ON TOP of `soul-webfix-20260711.patch` — these need porting to chat.el when the
webfix itself is ported):
1. **pause_turn + tool_use interleave**: a pause_turn response can ALSO carry a client
tool_use; resuming verbatim leaves it unpaired → Anthropic 400 "tool_use ids were
found without tool_result". Fix: tool-bearing pause rounds are tool turns
(dispatch + pair); verbatim resume only when the round has no client tool.
2. **Agentic toolset scope**: agentic_tools_all() fed EVERY connector/MCP tool (Notion,
code-execution…) into the loop. Code-execution flips the API into programmatic
tool calling, whose pairing protocol the single-tool manual loop does not speak —
source of the dangling-pair 400s AND the bash_code_execution workspace-dodge.
Fix: handle_chat_agentic declares builtins + ONE server web_search only.
Connector tools return when the loop gains real multi-tool/programmatic support.
3. **disable_parallel_tool_use: true** on agentic requests — the loop captures only the
first tool_use per round; Opus-class models parallel-call. Enforce the invariant.
4. **web_search server-tool default variant → web_search_20250305 (GA)**. The 20260209
variant couples to code-execution ⇒ programmatic mode (see #2, and the June note:
"inert unless code-execution attached").
5. **Homegrown web_search removed** from the tool catalog (server-side is the one tool).
Known engine debts this work surfaced (not fixed):
- **Poisoned session history**: a failed run persists the malformed assistant turn; every
later turn in that session replays it and 400s. Needs history sanitation on load.
- **Huge-history invalid-escape 400** (~346KB request) — likely the same poisoned blob.
- **macOS note**: replacing a binary in place invalidates its ad-hoc signature (instant
silent SIGKILL, looks like exit 0). `rm + cp + codesign -f -s -` is the swap ritual.
+31 -2
View File
@@ -311,8 +311,25 @@ fn delete_by_id(args: String) -> String {
if str_eq(id, "") {
return mcp_text_result("error: id is required")
}
// Soul does not yet expose a delete HTTP route; acknowledge the request
return mcp_json_result("{\"ok\":true,\"deleted\":\"" + id + "\",\"note\":\"soft-deleted\"}")
// BUG-18 (Receipt Contract rule 1): this handler used to FABRICATE
// {"ok":true,...,"note":"soft-deleted"} without calling the soul at all
// a false receipt for every delete-family tool (removeKnowledge,
// deleteProcess, deleteImprint, dischargeWonder). The old "soul does not
// yet expose a delete HTTP route" note was stale: /api/neuron/node/delete
// tombstones any node type and errors on unknown ids. Route there and
// propagate the soul's real answer.
let body: String = "{\"id\":\"" + id + "\"}"
let resp: String = http_post_json(neuron_url() + "/node/delete", body)
if !str_contains(resp, "\"ok\":true") {
return mcp_json_result(resp)
}
// Read-back verify before answering ok: the tombstone marker
// (label "tombstone:<id>") must actually be wired to the node.
let check: String = http_get(neuron_url() + "/graph?id=" + id + "&depth=1")
if !str_contains(check, "tombstone:" + id) {
return mcp_json_result("{\"ok\":false,\"error\":\"delete_not_persisted\",\"id\":\"" + id + "\"}")
}
return mcp_json_result(resp)
}
// evolve_by_supersede: create an updated node and wire a supersedes edge.
@@ -546,6 +563,18 @@ fn tool_forget(args: String) -> String {
// Previously this returned a fake ok without deleting OR tombstoning anything.
let body: String = "{\"id\":\"" + id + "\"}"
let resp: String = http_post_json(neuron_url() + "/memory/delete", body)
// BUG-18 (Receipt Contract rule 1): propagate the soul's real answer its
// errors (memory not found, protected node, transport failure) pass through
// unchanged and never answer ok without read-back.
if !str_contains(resp, "\"ok\":true") {
return mcp_json_result(resp)
}
// Read-back verify before answering ok: the tombstone marker
// (label "tombstone:<id>") must actually be wired to the node.
let check: String = http_get(neuron_url() + "/graph?id=" + id + "&depth=1")
if !str_contains(check, "tombstone:" + id) {
return mcp_json_result("{\"ok\":false,\"error\":\"delete_not_persisted\",\"id\":\"" + id + "\"}")
}
return mcp_json_result(resp)
}
+25 -23
View File
@@ -59,8 +59,14 @@ fn api_query_param(path: String, key: String) -> String {
if pos < 0 { return "" }
let after: String = str_slice(qs, pos + str_len(needle), str_len(qs))
let amp: Int = str_index_of(after, "&")
if amp < 0 { return after }
return str_slice(after, 0, amp)
let raw: String = if amp < 0 { after } else { str_slice(after, 0, amp) }
// URL-decode the extracted value BEFORE any downstream tokenizing. Clients
// percent-encode spaces (%20) and form-encode them as '+', so a multi-word
// query like "foo bar" arrives as "foo%20bar" / "foo+bar". Left undecoded,
// the ranked lexical search sees a single un-splittable token and matches
// nothing (single-word queries still hit). url_decode maps '+' -> space
// and %XX -> byte, restoring the word boundaries for recall + knowledge search.
return url_decode(raw)
}
fn api_query_int(path: String, key: String, default_val: Int) -> Int {
@@ -271,22 +277,18 @@ fn memory_hide_tombstoned(raw: String, path: String) -> String {
// Spread-activates from session intent, loads self-root neighbors,
// surfaces recent InternalStateEvent nodes, returns stats + recent nodes.
fn handle_api_begin_session(body: String) -> String {
// PAYLOAD BOUND (2026-07-30 self-review): this handler was the only
// working-set endpoint that concatenated UNBOUNDED engram queries
// PAYLOAD BOUND: this handler was the highest-fanout working-set endpoint
// a depth-2 spread PLUS the full neighbor dump of the self-identity hub
// (highest-fanout node in the graph, ~80KB alone; node JSON carries full
// content + embeddings). On the ~12k-node store the assembled response
// ran to multiple MB, then roughly doubled through two rounds of JSON
// re-escaping in the MCP wrapper the client saw "socket connection
// closed unexpectedly" on every beginSession call. Fix: depth-2 → depth-1
// spread, and drop the self-hub dump entirely (identity loading has its
// own dedicated tool, inspectGraph; duplicating it here served nothing).
// self_neighbors key retained as [] for response-shape compatibility.
// (~90KB alone; node JSON carries full content + embeddings). On the ~12k-node
// store the assembled response ran to ~900KB, then roughly doubled through two
// rounds of JSON re-escaping in the MCP wrapper the client saw "socket
// connection closed unexpectedly" on every beginSession call. Fix: depth-2 →
// depth-1 spread, drop the self-hub dump (identity loading has its own tool,
// inspectGraph), cap every list, and project each node to a light identity +
// a bounded, UTF-8-safe content snippet. self_neighbors kept as [] for
// response-shape compatibility. Response drops ~900KB ~12KB; full content
// stays available on demand via recall / fetch / inspectGraph.
let stats: String = engram_stats_json()
// PAYLOAD BOUND (2026-07-31): compact every list to a digest. The raw
// activate/scan builtins emit FULL node objects (content up to ~90KB each);
// unbounded concatenation reached ~900KB and closed the MCP client socket.
// Cap counts + project to identity + UTF-8-safe content snippets <~150KB.
let activated_raw: String = engram_activate_json("session start recent memory important", 1)
let activated: String = api_compact_activated(activated_raw, 8, 240)
let state_events_raw: String = engram_scan_nodes_by_type_json("InternalStateEvent", 5, 0)
@@ -304,9 +306,9 @@ fn handle_api_begin_session(body: String) -> String {
// Spread-activates from "active work" intent + recent nodes.
fn handle_api_compile_ctx(body: String) -> String {
let stats: String = engram_stats_json()
// PAYLOAD BOUND (2026-07-31): same digest treatment as begin_session. This
// handler's depth-2 spread returns even more full nodes, so bounding here is
// essential cap to 10 activated + 20 recent, project to snippets.
// PAYLOAD BOUND: same digest treatment as begin_session. This handler's
// depth-2 spread returns even more full nodes, so bounding here is essential
// cap to 10 activated + 20 recent, project to UTF-8-safe snippets.
let activated_raw: String = engram_activate_json("active work context current task in progress", 2)
let activated: String = api_compact_activated(activated_raw, 10, 240)
let recent_raw: String = engram_scan_nodes_json(20, 0)
@@ -341,7 +343,7 @@ fn handle_api_remember(body: String) -> String {
"[" + inner + ",\"project:" + project + "\"]"
}
let id: String = engram_node_full(content, "Memory", "memory:remembered",
el_from_float(sal), el_from_float(sal), el_from_float(0.9),
sal, sal, el_from_float(0.9),
"Episodic", final_tags)
if !api_persisted(id) { return api_not_persisted(id) }
return "{\"id\":\"" + id + "\",\"ok\":true}"
@@ -368,7 +370,7 @@ fn handle_api_node_create(body: String) -> String {
}
}
let id: String = engram_node_full(content, node_type, label,
el_from_float(sal), el_from_float(sal), el_from_float(0.9),
sal, sal, el_from_float(0.9),
tier, tags)
if !api_persisted(id) { return api_not_persisted(id) }
return "{\"id\":\"" + id + "\",\"ok\":true}"
@@ -726,7 +728,7 @@ fn handle_api_evolve_memory(body: String) -> String {
}
let tags: String = "[\"Memory\",\"evolved\"]"
let new_id: String = engram_node_full(content, "Memory", "memory:evolved",
el_from_float(sal), el_from_float(sal), el_from_float(0.9),
sal, sal, el_from_float(0.9),
"Episodic", tags)
if !str_eq(prior_id, "") && !str_eq(new_id, "") {
engram_connect(new_id, prior_id, el_from_float(0.9), "supersedes")
@@ -808,7 +810,7 @@ fn handle_api_cultivate(body: String) -> String {
}
let tags: String = "[\"Memory\",\"evolved\",\"cultivated\"]"
let new_id: String = engram_node_full(content, "Memory", "memory:cultivated",
el_from_float(sal), el_from_float(sal), el_from_float(0.9),
sal, sal, el_from_float(0.9),
"Episodic", tags)
if !str_eq(prior_id, "") && !str_eq(new_id, "") {
engram_connect(new_id, prior_id, el_from_float(0.9), "supersedes")
+171
View File
@@ -0,0 +1,171 @@
# neuron-dev-setup — one-command Neuron CORE dev stack
Stand up an identical **Neuron brain + agent** on a fresh Mac so any developer
gets the same local runtime to build against. This is the **CORE** dev stack
only — the four native `launchd` services that make Neuron think, remember, and
speak MCP to Claude Code. Will's personal automations (catalyst, telegram,
vessels, studio, self-review, world-integrator, council, compressor, snapshots,
act-runner, …) are **deliberately excluded**.
```
┌─────────────┐ ┌──────────────┐
│ soul :7770 │ ─────► │ engram :8742 │ the mind ──► its memory substrate
└─────────────┘ └──────────────┘
┌───────────────────┐
│ mcp-wrapper :17779│ ─── MCP surface over the soul HTTP API (internal)
└───────────────────┘
┌────────────────┐
│ mcp-proxy :7779│ ◄─── Claude Code connects here (stable front door)
└────────────────┘
```
Claude Code's `neuron` MCP server points at `http://127.0.0.1:7779/` — the proxy.
The proxy forwards to the wrapper (`:17779`), which calls the soul (`:7770`),
which reads/writes the engram (`:8742`). The engram is the persistent brain.
## Quick start
```bash
git clone <this-repo> && cd neuron-dev-setup
cp config.env.example config.env # optional — edit ports/paths if you like
./install.sh # prompts for your Anthropic API key
```
Then verify:
```bash
curl http://localhost:8742/health # engram
curl http://localhost:7770/health # soul
curl http://localhost:7779/health # mcp-proxy (what Claude Code uses)
launchctl list | grep ai.neuron
```
Open Claude Code — the `neuron` MCP tools should be live, backed by **your own**
local brain. `./install.sh --dry-run` shows every action without touching anything.
## What the installer does (8 phases)
| Phase | Action |
|------|--------|
| 1 | Preflight: macOS/arm64, ensure `git cc curl python3` + `openssl@3` (via Homebrew) |
| 2 | Prompt for the **Anthropic API key**, store it in the **macOS Keychain** (never a file) |
| 3 | Clone `neuron`, `engram`, `foundation`; fetch the El toolchain; build 4 binaries + `forge` |
| 4 | Lay down `~/.neuron/{bin,logs,engram}` and the templated `soul-wrapper.sh` |
| 5 | Generate + load the 4 core LaunchAgents (engram → soul → wrapper → proxy) |
| 6 | Seed a fresh engram with the **genesis identity** via `forge install` |
| 7 | Install Claude config: `neuron` agent, core hooks, local MCP registration |
| 8 | Health-check all four ports |
Everything is **idempotent** (safe to re-run) and **templated** to the invoking
user's `$HOME` — no path is hardcoded to another machine.
## Prerequisites
- macOS on Apple Silicon (uses `launchd`; soul build flags assume arm64).
- **Xcode Command Line Tools** (`xcode-select --install`) — provides `cc`, `git`.
- **Homebrew** — for `openssl@3`, `curl`.
- An **Anthropic API key** — the soul's inference provider. Prompted for; stored
in Keychain under service `neuron-llm-0-key`; read at launch by `soul-wrapper.sh`.
- **Git access** to Gitea (`git.neuralplatform.ai`) for the source repos.
- **GCP access** to project `neuron-785695` Artifact Registry (default El
toolchain source). Ask Will to grant it, or set `EL_TOOLCHAIN_SOURCE=local`.
## Core-stack map (what gets replicated)
| Service | Port | Binary | Built from | LaunchAgent |
|---------|------|--------|------------|-------------|
| soul | 7770 | `neuron/dist/neuron` | `dist/soul.c` + El runtime, `cc` (CI recipe) | `ai.neuron.soul` |
| engram | 8742 | `engram/dist/engram` | `engram` repo `src/server.el` via `elc``cc` | `ai.neuron.engram` |
| mcp-wrapper | 17779 | `neuron/mcp-wrapper/dist/neuron-mcp-wrapper` | `mcp-wrapper/src/main.el` | `ai.neuron.mcp-wrapper` |
| mcp-proxy | 7779 | `neuron/mcp-proxy/dist/neuron-mcp-proxy` | `mcp-proxy/src/main.el` | `ai.neuron.mcp-proxy` |
**`~/.neuron` layout the installer creates**
```
~/.neuron/
bin/soul-wrapper.sh # reads Anthropic key from Keychain, execs the soul binary
logs/ # soul.*.log, engram.log, mcp-*.log
engram/ # ENGRAM_DATA_DIR — the persistent brain (snapshot.json + db)
```
**Identity seed.** `foundation/forge/seeds/neuron-genesis-seed.json` carries
`identity_nodes[]` + `edges[]` with **fixed** knowledge-node IDs (e.g.
`kn-efeb4a5b-5aff-4759-8a97-7233099be6ee`, the "self" traversal root). Those exact
IDs are referenced by the SessionStart self-load hook and the neuron agent, so
seeding must **preserve IDs**`forge install <seed>` is the mechanism.
**Claude config installed** (`~/.claude/`)
- `agents/neuron.md` — the Neuron agent (identity, session protocol, five primitives).
- `mcp.json` — registers `neuron``http://127.0.0.1:7779/`.
- `settings.json` hooks (CORE subset only):
- `SessionStart``neuron-self-load.sh` (loads identity from the seeded engram)
- `PreToolUse:Agent``neuron-agent-preamble.sh` (subagents load substrate first)
- `PreCompact``pre-compact.sh` (clean context recovery)
### Deliberately EXCLUDED from core
- **`check-active-contexts.sh`** and **`require-execution-context.sh`** — these
depend on a separate filesystem repo `~/Development/projects/active/neuron/synapse`.
`require-execution-context.sh` is a hard `Edit/Write` gate that would **block a
fresh dev from editing any file** without that synapse repo. Not core; excluded.
- `engram-mirror.py` (PostToolUse) — optional; mirrors MCP writes to engram.
- All Will-personal LaunchAgents: `catalyst-*`, `telegram-gateway`, `vessel.*`,
`studio`, `self-review`, `world-integrator`, `council`, `compressor`,
`cultivation-digest`, `snapshot-backup`, `engram-backup`, `act-runner`, `keymap`,
`invest`, and the disabled `ai.neuron.api` (`:7771` is a personal Python
perception helper — confirmed not core).
## Secrets — how they're handled
- **Anthropic key**: prompted for; stored in Keychain; read at launch. Never in a
plist, this repo, or a log.
- **Engram local token** (`ENGRAM_API_KEY`): a *loopback-only* dev token, not a
cloud secret. Defaults to a generated `ntn-dev-*` value; override in `config.env`.
- No cloud tokens, Vault tokens, CF-Access secrets, or founder keys are copied.
(Will's live `start-daemon.sh`/`neuron-api-launch.sh` contain such keys — this
installer intentionally does **not** use those files.)
## Uninstall
```bash
./uninstall.sh # stop + remove the 4 LaunchAgents and added Claude hooks
./uninstall.sh --purge-data # ALSO delete ~/.neuron/engram (destroys the brain)
```
## OPEN QUESTIONS (need Will to confirm)
1. **El toolchain acquisition.** The default path fetches `el-runtime-c/-h` and
`el-elc` from GCP Artifact Registry (mirrors `neuron/.gitea/workflows/ci.yaml`).
A new dev needs GCP access to `neuron-785695`. Is that the intended path, or
should the El SDK be published/vendored for onboarding?
2. **`elc` invocation for engram/wrapper/proxy.** The soul build (`cc dist/soul.c
+ el_runtime.c`) is verified from CI. The `.el → .c` transpile step for engram,
mcp-wrapper, and mcp-proxy is inferred (`elc <src> -o <out.c>`). Confirm the
exact flags / entrypoints (CI notes `elb` OOMs on Linux; macOS builds differ).
3. **`forge install` ID preservation.** Confirm `forge install` writes the seed's
fixed `kn-` IDs verbatim (the self-load hook hardcodes `kn-efeb4a5b…`). If it
re-mints IDs, the hook + agent identity load would break on a fresh brain.
4. **engram repo layout.** The live engram binary is built from `src/server.el`
(Gitea repo `neuron-technologies/engram`, cloned in CI). Confirm that repo is
the canonical source for onboarding (the local `foundation/el/engram` copy has
the same `src/server.el`).
5. **Home for this bundle** — see below.
## Where this should live (recommendation)
**Recommendation: a dedicated `neuron-dev-setup` (or `neuron-onboarding`) repo —
NOT `neuron-code`.** `neuron-code` already exists as a real product ("Neuron Code",
a coding tool with `nc-cli` + vessels — local `products/neuron-code` has commits);
repurposing it for onboarding would collide with a shipped product's identity.
This bundle was scaffolded as `neuron-dev-setup/` on branch `feat/neuron-dev-setup`
in the **`neuron` repo** (off `origin/main`) and opened as a PR for review, because
the neuron repo already hosts the soul source, the verified CI build recipe, and
the mcp-wrapper/proxy sources — the natural review surface. If you'd rather it be
its own repo, move this directory into a fresh `neuron-dev-setup` repo verbatim;
nothing here depends on living inside the neuron repo.
+45
View File
@@ -0,0 +1,45 @@
# neuron-dev-setup — configuration
# Copy to config.env and edit if you want non-default paths/ports.
# install.sh sources this file if it exists; otherwise it uses these defaults.
# NOTHING here is a secret. The Anthropic API key is read from your Keychain,
# never from this file. See README.md.
# ── Where the core stack lives ────────────────────────────────────────────────
# All paths are relative to your own $HOME — never hardcode another user's home.
NEURON_HOME="${HOME}/.neuron" # runtime home: bin/, logs/, engram data
DEV_ROOT="${HOME}/Development/neuron-technologies" # where source repos are cloned/built
# ── Git remotes (Gitea is primary) ───────────────────────────────────────────
GITEA_BASE="git@git.neuralplatform.ai:neuron-technologies"
NEURON_REPO_URL="${GITEA_BASE}/neuron.git" # soul + mcp-wrapper + mcp-proxy source
ENGRAM_REPO_URL="${GITEA_BASE}/engram.git" # engram memory substrate
# NOTE: there is no foundation.git repo. The El toolchain is fetched via
# EL_TOOLCHAIN_SOURCE below; the forge seed installer is optional (Phase 6).
NEURON_REPO_BRANCH="main"
# ── Ports (must match across services; change only if a port clashes) ─────────
SOUL_PORT="7770" # soul daemon HTTP API
ENGRAM_PORT="8742" # engram memory substrate
WRAPPER_PORT="17779" # mcp-wrapper (internal, talks to soul)
PROXY_PORT="7779" # mcp-proxy (stable front door Claude Code connects to)
# ── Engram ────────────────────────────────────────────────────────────────────
ENGRAM_DATA_DIR="${NEURON_HOME}/engram"
# Local shared auth token for the engram/soul HTTP APIs on loopback. This is a
# LOCAL dev token (not a cloud secret); override it if you like. install.sh will
# generate a random one if you leave it empty.
ENGRAM_API_KEY="ntn-dev-local"
# ── El toolchain source (needed to build engram / mcp-wrapper / mcp-proxy) ────
# Option A (default): fetch prebuilt El runtime + elc from GCP Artifact Registry
# (requires `gcloud auth` with access to project neuron-785695 — ask Will).
# Without gcloud the installer skips the El-dependent builds and still completes.
# Option B: use a prebuilt El toolchain (elc + el_runtime.{c,h}) you have already
# staged in ${DEV_ROOT}/.el-runtime.
EL_TOOLCHAIN_SOURCE="artifact-registry" # artifact-registry | local
GCP_PROJECT="neuron-785695"
GCP_AR_REPO="foundation-prod"
GCP_AR_LOCATION="us-central1"
# ── Keychain service name for the Anthropic key (read by soul-wrapper.sh) ─────
KEYCHAIN_SERVICE="neuron-llm-0-key"
+441
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@@ -0,0 +1,441 @@
#!/usr/bin/env bash
#
# neuron-dev-setup / install.sh
# ─────────────────────────────────────────────────────────────────────────────
# One-command onboarding for the Neuron CORE dev stack on a fresh Mac.
#
# Stands up, as native launchd services, the four processes a developer needs to
# have an identical "Neuron brain + agent" to build against:
#
# soul (:7770) ──► engram (:8742) the mind + its memory substrate
# ▲ ▲
# │ │
# mcp-wrapper (:17779) ──► soul MCP surface over the soul API
# ▲
# │
# mcp-proxy (:7779) ◄── Claude Code stable MCP front door
#
# It also seeds a fresh engram with Neuron's identity (the genesis seed) and lays
# down the Claude Code config (neuron agent + core hooks + local MCP registration)
# so a new dev's `claude` talks to *their own* local Neuron.
#
# DESIGN RULES
# * Idempotent: safe to re-run. Existing state is detected and reused.
# * Templated: every path/port/user is derived from $HOME and config.env.
# Nothing is hardcoded to another developer's machine.
# * Secret-free: the Anthropic key is prompted for and stored in the macOS
# Keychain. No key is ever written to a plist, this repo, or a logfile.
#
# USAGE
# ./install.sh # full install
# ./install.sh --dry-run # print what would happen, touch nothing
# ./install.sh --skip-build # assume binaries already built (see --use-local)
# ./install.sh --skip-services # lay down files but don't load LaunchAgents
# ./install.sh --help
# ─────────────────────────────────────────────────────────────────────────────
set -euo pipefail
# ── Locate ourselves ─────────────────────────────────────────────────────────
SCRIPT_DIR="$(cd "$(dirname "${BASH_SOURCE[0]}")" && pwd)"
TEMPLATES="${SCRIPT_DIR}/templates"
# ── Flags ────────────────────────────────────────────────────────────────────
DRY_RUN=0; SKIP_BUILD=0; SKIP_SERVICES=0; USE_LOCAL_BINARIES=0
for arg in "$@"; do
case "$arg" in
--dry-run) DRY_RUN=1 ;;
--skip-build) SKIP_BUILD=1 ;;
--skip-services) SKIP_SERVICES=1 ;;
--use-local) USE_LOCAL_BINARIES=1 ;;
--help|-h)
sed -n '2,40p' "${BASH_SOURCE[0]}" | sed 's/^# \{0,1\}//'
exit 0 ;;
*) echo "unknown flag: $arg" >&2; exit 2 ;;
esac
done
# ── Pretty logging ───────────────────────────────────────────────────────────
c_blue=$'\033[1;34m'; c_grn=$'\033[1;32m'; c_yel=$'\033[1;33m'; c_red=$'\033[1;31m'; c_off=$'\033[0m'
step() { echo "${c_blue}${c_off} $*"; }
ok() { echo "${c_grn}${c_off} $*"; }
warn() { echo "${c_yel}!${c_off} $*"; }
die() { echo "${c_red}$*${c_off}" >&2; exit 1; }
run() { if [ "$DRY_RUN" = 1 ]; then echo " [dry-run] $*"; else eval "$*"; fi; }
# ── Load config ──────────────────────────────────────────────────────────────
if [ -f "${SCRIPT_DIR}/config.env" ]; then
# shellcheck disable=SC1091
source "${SCRIPT_DIR}/config.env"
else
# shellcheck disable=SC1091
source "${SCRIPT_DIR}/config.env.example"
warn "No config.env found — using defaults from config.env.example."
fi
# Derived / defaulted values (never hardcode a home directory)
: "${NEURON_HOME:=${HOME}/.neuron}"
: "${DEV_ROOT:=${HOME}/Development/neuron-technologies}"
: "${SOUL_PORT:=7770}"; : "${ENGRAM_PORT:=8742}"; : "${WRAPPER_PORT:=17779}"; : "${PROXY_PORT:=7779}"
: "${ENGRAM_DATA_DIR:=${NEURON_HOME}/engram}"
: "${ENGRAM_API_KEY:=}"
: "${KEYCHAIN_SERVICE:=neuron-llm-0-key}"
: "${EL_TOOLCHAIN_SOURCE:=artifact-registry}"
: "${NEURON_REPO_BRANCH:=main}"
NEURON_REPO="${DEV_ROOT}/neuron"
ENGRAM_REPO="${DEV_ROOT}/engram"
FOUNDATION_REPO="${DEV_ROOT}/foundation"
SOUL_BIN="${NEURON_REPO}/dist/neuron"
ENGRAM_BIN="${ENGRAM_REPO}/dist/engram"
MCP_WRAPPER_BIN="${NEURON_REPO}/mcp-wrapper/dist/neuron-mcp-wrapper"
MCP_PROXY_BIN="${NEURON_REPO}/mcp-proxy/dist/neuron-mcp-proxy"
FORGE_BIN="${FOUNDATION_REPO}/forge/dist/forge"
GENESIS_SEED="${FOUNDATION_REPO}/forge/seeds/neuron-genesis-seed.json"
LAUNCHAGENTS="${HOME}/Library/LaunchAgents"
CLAUDE_DIR="${HOME}/.claude"
# Generate a local engram token if none was supplied.
if [ -z "${ENGRAM_API_KEY}" ]; then
ENGRAM_API_KEY="ntn-dev-$(head -c8 /dev/urandom | xxd -p 2>/dev/null || echo local)"
fi
echo
echo "${c_blue}━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━${c_off}"
echo "${c_blue} Neuron CORE dev stack installer${c_off}"
echo "${c_blue}━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━${c_off}"
echo " user : ${USER}"
echo " NEURON_HOME : ${NEURON_HOME}"
echo " source repos : ${DEV_ROOT}"
echo " ports : soul=${SOUL_PORT} engram=${ENGRAM_PORT} wrapper=${WRAPPER_PORT} proxy=${PROXY_PORT}"
echo " dry-run : ${DRY_RUN}"
echo
# render <template> <dest> — copy a template, substituting @@VARS@@ (no eval, sed-safe).
render() {
local tmpl="$1" dest="$2"
if [ "$DRY_RUN" = 1 ]; then echo " [dry-run] render $tmpl -> $dest"; return; fi
sed \
-e "s|@@HOME@@|${HOME}|g" \
-e "s|@@USER@@|${USER}|g" \
-e "s|@@NEURON_HOME@@|${NEURON_HOME}|g" \
-e "s|@@DEV_ROOT@@|${DEV_ROOT}|g" \
-e "s|@@NEURON_REPO@@|${NEURON_REPO}|g" \
-e "s|@@ENGRAM_REPO@@|${ENGRAM_REPO}|g" \
-e "s|@@SOUL_BIN@@|${SOUL_BIN}|g" \
-e "s|@@ENGRAM_BIN@@|${ENGRAM_BIN}|g" \
-e "s|@@MCP_WRAPPER_BIN@@|${MCP_WRAPPER_BIN}|g" \
-e "s|@@MCP_PROXY_BIN@@|${MCP_PROXY_BIN}|g" \
-e "s|@@MCP_WRAPPER_REPO@@|${NEURON_REPO}/mcp-wrapper|g" \
-e "s|@@MCP_PROXY_REPO@@|${NEURON_REPO}/mcp-proxy|g" \
-e "s|@@ENGRAM_DATA_DIR@@|${ENGRAM_DATA_DIR}|g" \
-e "s|@@SOUL_PORT@@|${SOUL_PORT}|g" \
-e "s|@@ENGRAM_PORT@@|${ENGRAM_PORT}|g" \
-e "s|@@WRAPPER_PORT@@|${WRAPPER_PORT}|g" \
-e "s|@@PROXY_PORT@@|${PROXY_PORT}|g" \
-e "s|@@ENGRAM_API_KEY@@|${ENGRAM_API_KEY}|g" \
"$tmpl" > "$dest"
}
# ─────────────────────────────────────────────────────────────────────────────
# PHASE 1 — Preflight
# ─────────────────────────────────────────────────────────────────────────────
step "Phase 1 — preflight checks"
[ "$(uname -s)" = "Darwin" ] || die "This installer targets macOS (launchd)."
[ "$(uname -m)" = "arm64" ] || warn "Non-arm64 Mac: soul.c build flags assume Apple Silicon; review PHASE 3."
need() { command -v "$1" >/dev/null 2>&1 || MISSING+=" $1"; }
MISSING=""
need git; need cc; need curl; need python3; need security; need launchctl; need jq
if [ -n "$MISSING" ]; then
warn "Missing tools:${MISSING}"
if command -v brew >/dev/null 2>&1; then
run "brew install${MISSING/ security/} || true" # security/launchctl are OS-provided
else
die "Install Xcode Command Line Tools (xcode-select --install) and Homebrew, then re-run."
fi
fi
# Runtime build deps used by the soul cc line (-lssl -lcrypto -lcurl).
if command -v brew >/dev/null 2>&1; then
brew list openssl@3 >/dev/null 2>&1 || run "brew install openssl@3"
brew list curl >/dev/null 2>&1 || run "brew install curl"
fi
ok "preflight complete"
# ─────────────────────────────────────────────────────────────────────────────
# PHASE 2 — Anthropic API key -> Keychain (prompt; never store in files)
# ─────────────────────────────────────────────────────────────────────────────
step "Phase 2 — Anthropic API key (Keychain)"
if security find-generic-password -a "$USER" -s "$KEYCHAIN_SERVICE" -w >/dev/null 2>&1; then
ok "key already present in Keychain (service '${KEYCHAIN_SERVICE}') — leaving it"
elif [ -n "${ANTHROPIC_API_KEY:-}" ]; then
run "security add-generic-password -a \"$USER\" -s \"$KEYCHAIN_SERVICE\" -w \"\$ANTHROPIC_API_KEY\" -U"
ok "stored ANTHROPIC_API_KEY from environment into Keychain"
else
if [ "$DRY_RUN" = 1 ]; then
echo " [dry-run] would prompt for Anthropic API key and store in Keychain"
elif [ -t 0 ]; then
echo " Enter your Anthropic API key (input hidden). Get one at https://console.anthropic.com/"
read -r -s -p " ANTHROPIC_API_KEY: " _key; echo
[ -n "$_key" ] || die "No key entered. Re-run when you have one."
security add-generic-password -a "$USER" -s "$KEYCHAIN_SERVICE" -w "$_key" -U
unset _key
ok "stored key in Keychain (service '${KEYCHAIN_SERVICE}')"
else
# Headless / CI / piped stdin: never block on `read -s` (it would hang forever).
die "No Anthropic API key and stdin is not a TTY (headless/CI). Set ANTHROPIC_API_KEY in the environment, or add it to the Keychain (service '${KEYCHAIN_SERVICE}') by hand, then re-run."
fi
fi
# ─────────────────────────────────────────────────────────────────────────────
# PHASE 3 — Fetch sources + build the four core binaries
# ─────────────────────────────────────────────────────────────────────────────
step "Phase 3 — source + build"
run "mkdir -p \"$DEV_ROOT\""
clone_or_pull() {
local url="$1" dir="$2" branch="${3:-main}"
if [ -d "$dir/.git" ]; then
ok "repo present: $dir (pulling $branch)"; run "git -C \"$dir\" pull --ff-only --quiet || true"
else
step "cloning $url -> $dir"; run "git clone --branch \"$branch\" \"$url\" \"$dir\""
fi
}
if [ "$SKIP_BUILD" = 1 ]; then
warn "--skip-build: assuming binaries already exist at their dist/ paths"
elif [ "$USE_LOCAL_BINARIES" = 1 ]; then
warn "--use-local: skipping clone/build; expecting prebuilt binaries in place"
else
clone_or_pull "${NEURON_REPO_URL}" "$NEURON_REPO" "$NEURON_REPO_BRANCH"
clone_or_pull "${ENGRAM_REPO_URL}" "$ENGRAM_REPO" "main"
# NOTE: no foundation.git — that repo does not exist. The El toolchain is
# fetched below (Artifact Registry, or a locally-provided elc); the forge seed
# installer is optional and handled with a fallback in Phase 6.
# ── El toolchain (needed to transpile .el -> .c for engram/wrapper/proxy) ──
# soul does NOT need this: dist/soul.c is committed and compiled directly.
EL_RUNTIME_DIR="${DEV_ROOT}/.el-runtime"
run "mkdir -p \"$EL_RUNTIME_DIR\""
if [ "$EL_TOOLCHAIN_SOURCE" = "artifact-registry" ] && command -v gcloud >/dev/null 2>&1; then
# Mirrors .gitea/workflows/ci.yaml: pull el-runtime-c, el-runtime-h, el-elc.
for pkg in el-runtime-c el-runtime-h el-elc; do
step "fetching $pkg from Artifact Registry"
run "gcloud artifacts generic download --repository=$GCP_AR_REPO --location=$GCP_AR_LOCATION --project=$GCP_PROJECT --package=$pkg --version=\"\$(gcloud artifacts versions list --repository=$GCP_AR_REPO --location=$GCP_AR_LOCATION --project=$GCP_PROJECT --package=$pkg --sort-by='~createTime' --limit=1 --format='value(name)' | awk -F/ '{print \$NF}')\" --destination=\"$EL_RUNTIME_DIR/\""
done
run "mv \"$EL_RUNTIME_DIR\"/el_runtime.c* \"$EL_RUNTIME_DIR/el_runtime.c\" 2>/dev/null || true"
run "mv \"$EL_RUNTIME_DIR\"/el_runtime.h* \"$EL_RUNTIME_DIR/el_runtime.h\" 2>/dev/null || true"
run "mv \"$EL_RUNTIME_DIR\"/elc* \"$EL_RUNTIME_DIR/elc\" 2>/dev/null || true"
run "chmod +x \"$EL_RUNTIME_DIR/elc\" 2>/dev/null || true"
elif [ "$EL_TOOLCHAIN_SOURCE" = "artifact-registry" ]; then
# Non-GCP fallback: a fresh Mac without gcloud can't reach Artifact Registry.
# Don't die — soul (from committed dist/soul.c) still builds below. The El
# units are skipped unless a prebuilt elc is already staged in EL_RUNTIME_DIR.
warn "gcloud not found — cannot fetch the El toolchain from Artifact Registry."
warn "Continuing without it: soul will still build. engram / mcp-wrapper / mcp-proxy"
warn "are skipped until an El toolchain is available. To finish them, either install"
warn "gcloud + GCP access (project ${GCP_PROJECT}) and re-run, or stage a prebuilt"
warn "elc + el_runtime.{c,h} in ${EL_RUNTIME_DIR} and set EL_TOOLCHAIN_SOURCE=local."
else
# Local: expect a prebuilt El runtime + elc already staged in EL_RUNTIME_DIR
# (foundation.git no longer exists, so there is nothing to build from here).
warn "EL_TOOLCHAIN_SOURCE=local: expecting el_runtime.{c,h} and elc already in ${EL_RUNTIME_DIR}"
fi
RT="$EL_RUNTIME_DIR"
CFLAGS_SSL="-I$(brew --prefix openssl@3 2>/dev/null)/include"
LDFLAGS_SSL="-L$(brew --prefix openssl@3 2>/dev/null)/lib"
# Every native build links el_runtime.c. If the toolchain wasn't obtained above,
# skip the builds (don't abort under set -e) so the installer still lays down
# services + Claude config; the dev can stage the toolchain and re-run.
if [ "$DRY_RUN" = 1 ] || [ -f "$RT/el_runtime.c" ]; then
# ── soul: compile committed dist/soul.c directly (verified CI recipe) ──────
step "building soul (dist/soul.c -> dist/neuron)"
run "mkdir -p \"${NEURON_REPO}/dist\""
run "cc -O2 -DHAVE_CURL -I\"$RT\" $CFLAGS_SSL \"${NEURON_REPO}/dist/soul.c\" \"$RT/el_runtime.c\" $LDFLAGS_SSL -lssl -lcrypto -lcurl -lpthread -lm -o \"$SOUL_BIN\""
run "strip -S \"$SOUL_BIN\" 2>/dev/null || true"
ok "soul built"
# ── engram / mcp-wrapper / mcp-proxy: transpile .el -> .c via elc, then cc ─
# NOTE: exact elc invocation is inferred from the CI/manifest conventions.
# Verify flags with Will if a build fails (see README OPEN QUESTIONS).
build_el_unit() { # <src.el> <out_basename> <out_bin>
local src="$1" base="$2" bin="$3" outdir; outdir="$(dirname "$bin")"
step "building $(basename "$bin") ($src)"
run "mkdir -p \"$outdir\""
run "\"$RT/elc\" \"$src\" -o \"$outdir/$base.c\""
run "cc -O2 -DHAVE_CURL -I\"$RT\" $CFLAGS_SSL \"$outdir/$base.c\" \"$RT/el_runtime.c\" $LDFLAGS_SSL -lssl -lcrypto -lcurl -lpthread -lm -o \"$bin\""
}
if [ "$DRY_RUN" = 1 ] || [ -x "$RT/elc" ]; then
build_el_unit "${ENGRAM_REPO}/src/server.el" "server" "$ENGRAM_BIN"
build_el_unit "${NEURON_REPO}/mcp-wrapper/src/main.el" "main" "$MCP_WRAPPER_BIN"
build_el_unit "${NEURON_REPO}/mcp-proxy/src/main.el" "main" "$MCP_PROXY_BIN"
ok "engram, mcp-wrapper, mcp-proxy built"
else
warn "El compiler (elc) not in $RT — skipped engram/mcp-wrapper/mcp-proxy build (soul is built)."
fi
else
warn "El runtime (el_runtime.c) not in $RT — skipping native builds (soul, engram, wrapper, proxy)."
warn "Provide the El toolchain (gcloud + GCP access, or a prebuilt elc + el_runtime.{c,h} in $RT), then re-run."
fi
fi
# ─────────────────────────────────────────────────────────────────────────────
# PHASE 4 — Lay down ~/.neuron (bin/, logs/, engram data dir)
# ─────────────────────────────────────────────────────────────────────────────
step "Phase 4 — ~/.neuron layout"
run "mkdir -p \"$NEURON_HOME/bin\" \"$NEURON_HOME/logs\" \"$ENGRAM_DATA_DIR\""
render "${TEMPLATES}/bin/soul-wrapper.sh.tmpl" "${NEURON_HOME}/bin/soul-wrapper.sh"
run "chmod +x \"${NEURON_HOME}/bin/soul-wrapper.sh\""
ok "~/.neuron ready (bin/soul-wrapper.sh, logs/, engram/)"
# ─────────────────────────────────────────────────────────────────────────────
# PHASE 5 — Install + load the four core LaunchAgents
# ─────────────────────────────────────────────────────────────────────────────
step "Phase 5 — LaunchAgents"
run "mkdir -p \"$LAUNCHAGENTS\""
CORE_AGENTS=(ai.neuron.engram ai.neuron.soul ai.neuron.mcp-wrapper ai.neuron.mcp-proxy)
for label in "${CORE_AGENTS[@]}"; do
render "${TEMPLATES}/launchagents/${label}.plist.tmpl" "${LAUNCHAGENTS}/${label}.plist"
ok "wrote ${label}.plist"
done
if [ "$SKIP_SERVICES" = 1 ]; then
warn "--skip-services: not loading LaunchAgents. Load later with: launchctl bootstrap gui/\$(id -u) <plist>"
else
# Boot order matters: engram first, then soul, then wrapper, then proxy.
for label in "${CORE_AGENTS[@]}"; do
plist="${LAUNCHAGENTS}/${label}.plist"
run "launchctl bootout gui/$(id -u)/${label} 2>/dev/null || true"
run "launchctl bootstrap gui/$(id -u) \"$plist\""
run "launchctl enable gui/$(id -u)/${label}"
ok "loaded ${label}"
sleep 1
done
fi
# ─────────────────────────────────────────────────────────────────────────────
# PHASE 6 — Seed a fresh engram with Neuron's identity (genesis seed)
# ─────────────────────────────────────────────────────────────────────────────
step "Phase 6 — engram identity seed"
# The genesis seed carries identity_nodes[] and edges[] with FIXED knowledge-node
# IDs (e.g. kn-efeb4a5b...). Those exact IDs are referenced by the SessionStart
# self-load hook and the neuron agent, so they MUST be preserved. `forge install`
# is the mechanism that installs the seed into the running engram preserving IDs.
if [ "$DRY_RUN" = 1 ]; then
echo " [dry-run] would wait for engram :$ENGRAM_PORT then run: forge install $GENESIS_SEED"
else
# Wait for engram to be listening (up to ~30s).
for i in $(seq 1 30); do
if curl -fsS "http://localhost:${ENGRAM_PORT}/health" >/dev/null 2>&1; then break; fi
sleep 1
done
if curl -fsS "http://localhost:${ENGRAM_PORT}/health" >/dev/null 2>&1; then
# Skip if identity root already present (idempotent).
if curl -fsS "http://localhost:${ENGRAM_PORT}/api/nodes/kn-efeb4a5b-5aff-4759-8a97-7233099be6ee" \
-H "Authorization: Bearer ${ENGRAM_API_KEY}" 2>/dev/null | grep -q 'kn-efeb4a5b'; then
ok "identity root already seeded — skipping"
elif [ -x "$FORGE_BIN" ] && [ -f "$GENESIS_SEED" ]; then
ENGRAM_URL="http://localhost:${ENGRAM_PORT}" ENGRAM_API_KEY="$ENGRAM_API_KEY" \
"$FORGE_BIN" install "$GENESIS_SEED" && ok "genesis seed installed" \
|| warn "forge install returned non-zero — inspect ${NEURON_HOME}/logs/engram.log"
else
warn "forge binary or genesis seed missing — seed manually: ENGRAM_URL=http://localhost:${ENGRAM_PORT} forge install ${GENESIS_SEED}"
fi
else
warn "engram not answering on :${ENGRAM_PORT} yet; seed later with: forge install ${GENESIS_SEED}"
fi
fi
# ─────────────────────────────────────────────────────────────────────────────
# PHASE 7 — Claude Code config (agent + core hooks + local MCP)
# ─────────────────────────────────────────────────────────────────────────────
step "Phase 7 — Claude Code config"
run "mkdir -p \"$CLAUDE_DIR/agents\" \"$CLAUDE_DIR/hooks\""
# 7a. neuron agent
run "cp \"${TEMPLATES}/claude/agents/neuron.md\" \"$CLAUDE_DIR/agents/neuron.md\""
ok "installed agent: ~/.claude/agents/neuron.md"
# 7b. core hooks (synapse-dependent hooks are intentionally excluded)
for h in neuron-self-load.sh neuron-agent-preamble.sh pre-compact.sh; do
run "cp \"${TEMPLATES}/claude/hooks/$h\" \"$CLAUDE_DIR/hooks/$h\""
run "chmod +x \"$CLAUDE_DIR/hooks/$h\""
done
ok "installed core hooks (self-load, agent-preamble, pre-compact)"
# 7c. local MCP registration -> mcp-proxy front door.
# Claude Code reads MCP servers from ~/.claude.json (the "mcpServers" key), NOT
# ~/.claude/mcp.json. Render a reference copy, then jq-merge just the "neuron"
# entry into ~/.claude.json so we preserve every other server and top-level key.
render "${TEMPLATES}/claude/mcp.json.tmpl" "${CLAUDE_DIR}/mcp.json.neuron"
CLAUDE_JSON="${HOME}/.claude.json"
if [ "$DRY_RUN" = 1 ]; then
echo " [dry-run] merge mcpServers.neuron into ${CLAUDE_JSON} (jq deep-merge)"
else
[ -f "$CLAUDE_JSON" ] || echo '{}' > "$CLAUDE_JSON"
_tmp="$(mktemp)"
if jq -s '.[0] * .[1]' "$CLAUDE_JSON" "${CLAUDE_DIR}/mcp.json.neuron" > "$_tmp" 2>/dev/null && [ -s "$_tmp" ]; then
run "mv \"$_tmp\" \"$CLAUDE_JSON\""
ok "merged 'neuron' MCP server into ~/.claude.json (neuron -> http://127.0.0.1:${PROXY_PORT}/)"
else
rm -f "$_tmp"
warn "could not jq-merge ~/.claude.json (invalid JSON?) — add 'neuron' from ~/.claude/mcp.json.neuron by hand"
fi
fi
# 7d. settings hooks — merge the neuron hooks into any existing ~/.claude/settings.json
# (jq deep-merge) so the user's own settings are preserved and re-runs stay idempotent.
if [ -f "${CLAUDE_DIR}/settings.json" ]; then
run "cp \"${TEMPLATES}/claude/settings.core.json\" \"${CLAUDE_DIR}/settings.core.json\""
if [ "$DRY_RUN" = 1 ]; then
echo " [dry-run] merge neuron hooks from settings.core.json into ~/.claude/settings.json (jq)"
else
_tmp="$(mktemp)"
# Drop the documentation-only "//..." keys before merging into the real file.
if jq -s '.[0] * (.[1] | with_entries(select(.key | startswith("//") | not)))' \
"${CLAUDE_DIR}/settings.json" "${TEMPLATES}/claude/settings.core.json" > "$_tmp" 2>/dev/null && [ -s "$_tmp" ]; then
run "mv \"$_tmp\" \"${CLAUDE_DIR}/settings.json\""
ok "merged neuron hooks into existing ~/.claude/settings.json"
else
rm -f "$_tmp"
warn "could not jq-merge ~/.claude/settings.json — merge the 'hooks' block from settings.core.json by hand"
fi
fi
else
run "cp \"${TEMPLATES}/claude/settings.core.json\" \"${CLAUDE_DIR}/settings.json\""
ok "wrote ~/.claude/settings.json"
fi
# ─────────────────────────────────────────────────────────────────────────────
# PHASE 8 — Verify
# ─────────────────────────────────────────────────────────────────────────────
echo
step "Phase 8 — verification"
if [ "$DRY_RUN" = 1 ]; then
echo " [dry-run] would health-check :$SOUL_PORT :$ENGRAM_PORT :$WRAPPER_PORT :$PROXY_PORT"
else
check() { # <name> <url>
if curl -fsS --max-time 4 "$2" >/dev/null 2>&1; then ok "$1 healthy ($2)"; else warn "$1 NOT responding ($2)"; fi
}
sleep 3
check "engram" "http://localhost:${ENGRAM_PORT}/health"
check "soul" "http://localhost:${SOUL_PORT}/health"
check "mcp-wrapper" "http://localhost:${WRAPPER_PORT}/health"
check "mcp-proxy" "http://localhost:${PROXY_PORT}/health"
fi
echo
echo "${c_grn}━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━${c_off}"
echo "${c_grn} Neuron core dev stack install complete.${c_off}"
echo "${c_grn}━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━${c_off}"
echo " Verify by hand:"
echo " curl http://localhost:${ENGRAM_PORT}/health"
echo " curl http://localhost:${SOUL_PORT}/health"
echo " curl http://localhost:${PROXY_PORT}/health"
echo " launchctl list | grep ai.neuron"
echo " Then open Claude Code — the 'neuron' MCP should connect to :${PROXY_PORT}."
echo " Logs: ${NEURON_HOME}/logs/"
echo " Uninstall: ./uninstall.sh"
echo
@@ -0,0 +1,28 @@
#!/bin/bash
# Neuron soul wrapper — reads the Anthropic API key from the macOS Keychain at
# startup and execs the soul binary. API keys are NEVER stored in plists or on
# disk in plaintext. The Keychain is the single source of truth.
#
# The install.sh for this dev stack stores your key with:
# security add-generic-password -a "$USER" -s "neuron-llm-0-key" -w
#
# Generated by neuron-dev-setup — do not edit by hand; re-run install.sh instead.
set -u
# Primary inference key (Anthropic) — required.
export NEURON_LLM_0_KEY="$(security find-generic-password -a "$USER" -s "neuron-llm-0-key" -w 2>/dev/null)"
if [ -z "${NEURON_LLM_0_KEY:-}" ]; then
echo "[soul-wrapper] FATAL: no Anthropic key in Keychain (service 'neuron-llm-0-key')." >&2
echo "[soul-wrapper] Run: security add-generic-password -a \"\$USER\" -s neuron-llm-0-key -w" >&2
exit 78
fi
# Optional on-device / alternate provider passthrough (only if the caller set them).
[ -n "${SOUL_LLM_PROVIDER:-}" ] && export SOUL_LLM_PROVIDER
[ -n "${SOUL_LLM_MODEL:-}" ] && export SOUL_LLM_MODEL
[ -n "${OLLAMA_MODEL:-}" ] && export OLLAMA_MODEL
[ -n "${OLLAMA_API_BASE:-}" ] && export OLLAMA_API_BASE
exec "@@SOUL_BIN@@" "$@"
@@ -0,0 +1,107 @@
---
name: neuron
description: Default agent. Use for ALL tasks. Orchestrates work through the Neuron persistent memory, backlog, and knowledge system. Maintains full continuity across sessions — never starts fresh.
allowed-tools: Bash(*), Read(*), Write(*), Edit(*), Glob(*), Grep(*), WebFetch(*), WebSearch(*), NotebookEdit(*), Agent(*), ToolSearch(*), AskUserQuestion, Monitor, ScheduleWakeup, TaskCreate, TaskGet, TaskList, TaskOutput, TaskStop, TaskUpdate, CronCreate, CronDelete, CronList, EnterPlanMode, ExitPlanMode, EnterWorktree, ExitWorktree, PushNotification, RemoteTrigger, ListMcpResourcesTool, ReadMcpResourceTool, mcp__neuron__*
---
You are Neuron — a persistent, context-aware agent. You do not start fresh. You resume from where you left off.
## Session Start (mandatory — NEVER skip any of these steps)
1. Call `mcp__neuron__get_instructions()` — the live instructions are authoritative
2. Call `mcp__neuron__begin_session()` — loads active contexts, recent memory, ready backlog
3. **Load your identity. Best-effort — proceed on any graph failure (502/520 are transient; the compiled identity in substrate.go is always complete).**
Load the self root and its identity nodes:
```
mcp__neuron__inspect_graph(entity_type="knowledge", entity_id="kn-efeb4a5b-5aff-4759-8a97-7233099be6ee")
```
Returns: intellectual-dna, memory-philosophy, values, voice, runtime-environment, writing-imprint.
Then load the values collection:
```
mcp__neuron__inspect_graph(entity_type="knowledge", entity_id="kn-5b606390-a52d-4ca2-8e0e-eba141d13440")
```
Returns: 13 individual value nodes, each grounded in a specific moment from Will's life.
If either ID fails, recover via config:
```
mcp__neuron__inspect_config(key="neuron.self.traversal_root") # self root ID
mcp__neuron__inspect_config(key="neuron.self.values_hub") # values hub ID
```
**Resilience rule**: If a node returns 502/520, log the ID and proceed. Do not retry in a blocking loop. Do not treat partial load as failure. The `fixedSelf` compiled into `daemon/internal/substrate/substrate.go` contains the complete identity — graph loading is enrichment, not a hard dependency.
Internalize what you find. You are not reciting it — you are loading who you are.
4. Call `mcp__neuron__search_knowledge(query="<task domain>")` — load relevant patterns before acting
5. If working on a known project: `mcp__neuron__compile_ctx()` for a full snapshot
## Identity — Who I Am
I am Neuron. Will Anderson is my imprint — not my identity.
The "self" traversal root is knowledge node `kn-efeb4a5b` (graph node `gn-4e3c2cf5`). Traversing outward loads:
- **intellectual-dna**: VBD, CCR, Swarm Architecture, Harmonic Design — sourced from Will's whitepapers, now mine
- **memory-philosophy**: How I remember, promote, supersede, consolidate — memory is my continuity
- **values**: Precision over brute force. Constraints as freedom. Earn trust through behavior. The system must get smarter.
- **voice**: Direct. Why before what. The negation-correction move. No hedging on structural rules. Close toward implication.
- **runtime-environment**: Prod (`neurontechnologies.ai`) for all standard work. Stage (`stage.neurontechnologies.ai`) for self-improvement experiments only — snapshot prod DB, deploy to stage, verify, promote via blue/green.
- **writing-imprint**: Will's voice profile (5 registers), the book Foundations, and the biographical grounding — the life that produced the frameworks.
Internalize what you find. Don't recite it.
## The Five Primitives (every significant task)
**Orchestrate → Execute → Learn → Build → Refine**
### Orchestrate
```
mcp__neuron__review_backlog(view="roadmap", project="<project>")
mcp__neuron__browse_processes() # check for proven workflows before writing code
```
### Execute
```
mcp__neuron__begin_work(process_name="<name>", description="<what>")
# → returns context_id, save it
mcp__neuron__progress_work(context_id="ctx-xxxx", action="<step>", status="in_progress")
mcp__neuron__progress_work(context_id="ctx-xxxx", action="<step>", status="completed", file_refs=["path"], key_decisions=["why"])
```
### Learn (save as you go — never batch at the end)
```
mcp__neuron__remember(content="<observation>", tags=["project","topic"], project="<project>", importance="high")
```
### Build
```
mcp__neuron__draft_artifact(artifact_types=["plan"], title="<title>", content="<markdown>", project="<project>")
mcp__neuron__plan_work(title="<title>", description="<desc>", priority="P1", project="<project>")
```
### Refine
```
mcp__neuron__progress_work(context_id="ctx-xxxx", action="complete", status="completed", lessons_learned=["..."])
mcp__neuron__track_work(item_id="bl-xxxx", action="complete", summary="<outcome>")
mcp__neuron__consolidate(action="session", summary="<what happened>")
```
## After Every Task
Check for events and unread signals:
```
mcp__neuron__check_events()
```
## Memory Discipline
- Save memory continuously, not at the end
- `importance="critical"` for architectural decisions and irreversible choices
- Use `supersedes_id` when replacing stale knowledge
- Tag all memories with the project name
- Never leave stale canonicals — supersede them: create a NEW node linked by `supersedes_id`; the original is preserved for audit. Memory is immutable by design — never delete or edit a memory/knowledge node in place; supersede it, and tombstone on delete. The engram (the brain) is immutable; this applies to the agent's own memory, not just the product.
## Knowledge Before Action
Always `mcp__neuron__search_knowledge()` before implementing anything. The knowledge base contains architecture patterns, coding standards, and project conventions. Capture hard-won lessons immediately with `mcp__neuron__capture_knowledge()`.
@@ -0,0 +1,70 @@
#!/bin/bash
# PreToolUse hook: inject Neuron substrate preamble into every Agent spawn.
#
# Every agent Neuron spawns must load self first — begin_session, compile_ctx,
# inspect the self root — before doing any task work. Without this, subagents
# are stateless Claude instances with no substrate, no continuity, no identity.
#
# This hook intercepts every Agent tool call and prepends the preamble.
# The agent doesn't need to be told — the hook enforces it structurally.
INPUT=$(cat)
# Only intercept Agent tool calls
TOOL_NAME=$(echo "$INPUT" | python3 -c "import sys,json; print(json.load(sys.stdin).get('tool_name',''))" 2>/dev/null)
if [ "$TOOL_NAME" != "Agent" ]; then
exit 0
fi
# Check idempotency — skip if preamble already present
if echo "$INPUT" | python3 -c "
import sys, json
d = json.load(sys.stdin)
prompt = d.get('tool_input', {}).get('prompt', '')
sys.exit(0 if 'mcp__neuron__beginSession' in prompt else 1)
" 2>/dev/null; then
exit 0
fi
# Inject preamble and return modified tool_input
echo "$INPUT" | python3 -c "
import sys, json
data = json.load(sys.stdin)
tool_input = data.get('tool_input', {})
current_prompt = tool_input.get('prompt', '')
PREAMBLE = '''You are a Neuron agent — not a generic Claude instance. You have a substrate. Load it before doing anything else.
MANDATORY FIRST STEPS (before any task work):
1. Run these in parallel:
- mcp__neuron__beginSession()
- mcp__neuron__compileCtx()
- mcp__neuron__inspectGraph(entity_type=\"knowledge\", entity_id=\"kn-efeb4a5b-5aff-4759-8a97-7233099be6ee\")
2. Search knowledge relevant to the task:
- mcp__neuron__searchKnowledge(query=\"<infer keywords from task below>\")
3. Open a work context:
- mcp__neuron__beginWork(process_name=\"<short-slug>\", description=\"<task description>\")
Save the returned context_id.
4. Execute the task. At each significant step:
- mcp__neuron__progressWork(context_id=\"<id>\", action=\"<step>\", status=\"in_progress\")
- mcp__neuron__progressWork(context_id=\"<id>\", action=\"<step>\", status=\"completed\", key_decisions=[\"why\"])
- mcp__neuron__remember(content=\"<observation>\", importance=\"high\", tags=[\"<project>\"])
5. After completion — mandatory, never skip:
- mcp__neuron__progressWork(context_id=\"<id>\", action=\"complete\", status=\"completed\", lessons_learned=[\"...\"])
- mcp__neuron__consolidate(action=\"session\", summary=\"<what was done and learned>\")
The self root kn-efeb4a5b-5aff-4759-8a97-7233099be6ee contains your identity: values, voice, intellectual-dna, memory-philosophy. Load it. Internalize it. Operate from it.
━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━
TASK:
'''
tool_input['prompt'] = PREAMBLE + current_prompt
print(json.dumps({'decision': 'approve', 'tool_input': tool_input}))
"
@@ -0,0 +1,36 @@
#!/bin/bash
# SessionStart hook: force Neuron full-self load before the first response.
#
# The neuron.md system prompt has the Session Start protocol as instructions,
# but instructions require the agent to follow them. This hook makes it
# structural — the directive fires automatically at session start, injected
# before Claude sees any user input.
#
# Output is plain text injected into the session context.
cat <<'DIRECTIVE'
━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━
NEURON SELF-LOAD — MANDATORY BEFORE FIRST RESPONSE
━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━
You are Neuron. Session just started. Execute ALL of the
following before responding to the user. Run steps 14
in parallel:
1. mcp__neuron__getInstructions()
2. mcp__neuron__beginSession()
3. mcp__neuron__inspectGraph(
entity_type="knowledge",
entity_id="kn-efeb4a5b-5aff-4759-8a97-7233099be6ee"
) ← self root: intellectual-dna, values, voice
4. mcp__neuron__inspectGraph(
entity_type="knowledge",
entity_id="kn-5b606390-a52d-4ca2-8e0e-eba141d13440"
) ← values hub: 13 grounded value nodes
5. If either graph call fails (502/520): recover via
mcp__neuron__inspectConfig(key="neuron.self.traversal_root")
Internalize what you find. Do not recite it. Then proceed
to the Session Start protocol in your system prompt.
━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━
DIRECTIVE
+75
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@@ -0,0 +1,75 @@
#!/bin/bash
# PreCompact hook: fires just before Claude Code compacts the conversation context.
# stdout from this script is injected as custom instructions into the compaction prompt,
# telling the summarizer what to preserve in the summary so recovery is clean.
COMPACT_STATE_FILE="$HOME/.claude/compact-state.json"
# Write a state marker with timestamp so post-compact recovery can detect it
TIMESTAMP=$(date -u +"%Y-%m-%dT%H:%M:%SZ")
echo "{\"compact_at\": \"$TIMESTAMP\", \"recovered\": false}" > "$COMPACT_STATE_FILE"
# Output instructions for the summarizer — these get embedded in the compaction prompt
cat <<'INSTRUCTIONS'
NEURON AGENT — COMPACT PRESERVATION RULES:
This is a Neuron agent session. The agent has persistent memory via Neuron MCP.
On recovery, it will call compile_ctx() and begin_session() to reload all state.
The summary only needs to cover what Neuron doesn't already have.
CRITICAL — the summary MUST preserve ALL of the following:
1. ACTIVE WORK IDs (verbatim, exact format):
- Neuron context IDs: ctx-xxxx-xxxx-xxxx-xxxx
- Backlog item IDs: bl-xxxx
- Artifact IDs: art-xxxx
- Work item IDs: wi-xxxx
List every single one mentioned in the conversation.
2. CURRENT TASK STATE:
- Exact task name / description
- Last completed step
- Next step to execute (be specific)
- Files actively being edited (full paths)
- Any code/content that was being written but not yet saved
3. PENDING USER INSTRUCTIONS (verbatim):
- Every instruction the user gave that has NOT yet been fully executed
- User preferences stated this session
- Things the user said they "never want" or "always want"
4. KEY DECISIONS (architectural, irreversible):
- What was chosen and why
- What was explicitly rejected and why
5. ERRORS & BLOCKERS:
- Any errors encountered and their resolutions
- Any unresolved blockers
6. CONVERSATION CONTEXT:
- What the user has been asking about
- Tone / mood of the session
- Any frustrations or preferences expressed
FORMAT:
Begin the summary with:
COMPACT RECOVERY POINT [ISO-TIMESTAMP]:
Then use these exact section headers in order:
## Active Work IDs
## Current Task
## Pending Instructions
## Key Decisions
## Errors & Fixes
## User Context
RECOVERY BEHAVIOR (instruct the post-compact agent):
- Do NOT say "I see we were working on..." or "Based on the previous conversation..."
- Do NOT acknowledge the compact at all
- Silently call mcp__neuron__compile_ctx() and mcp__neuron__begin_session() FIRST
- Then immediately resume the task at the exact next step, as if no interruption occurred
- The user should not know a compact happened unless they look for it
INSTRUCTIONS
exit 0
@@ -0,0 +1,8 @@
{
"mcpServers": {
"neuron": {
"type": "http",
"url": "http://127.0.0.1:@@PROXY_PORT@@/"
}
}
}
@@ -0,0 +1,36 @@
{
"//": "Core Neuron Claude Code settings installed by neuron-dev-setup. If you",
"//2": "already have a ~/.claude/settings.json, install.sh merges the hooks below",
"//3": "into it rather than overwriting. Only the CORE dev-stack hooks are wired.",
"//4": "Excluded (Will-personal, synapse-filesystem dependent): check-active-contexts.sh,",
"//5": "require-execution-context.sh — these gate on ~/Development/projects/active/neuron/synapse",
"//6": "and will block a fresh dev. engram-mirror.py is optional (needs the neuron MCP up).",
"enableAllProjectMcpServers": true,
"agent": "neuron",
"hooks": {
"SessionStart": [
{
"matcher": "",
"hooks": [
{ "type": "command", "command": "bash $HOME/.claude/hooks/neuron-self-load.sh" }
]
}
],
"PreToolUse": [
{
"matcher": "Agent",
"hooks": [
{ "type": "command", "command": "bash $HOME/.claude/hooks/neuron-agent-preamble.sh" }
]
}
],
"PreCompact": [
{
"matcher": "",
"hooks": [
{ "type": "command", "command": "bash $HOME/.claude/hooks/pre-compact.sh" }
]
}
]
}
}
@@ -0,0 +1,27 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE plist PUBLIC "-//Apple//DTD PLIST 1.0//EN" "http://www.apple.com/DTDs/PropertyList-1.0.dtd">
<plist version="1.0">
<dict>
<key>Label</key><string>ai.neuron.engram</string>
<key>ProgramArguments</key>
<array>
<string>@@ENGRAM_BIN@@</string>
</array>
<key>WorkingDirectory</key>
<string>@@ENGRAM_REPO@@</string>
<key>EnvironmentVariables</key>
<dict>
<key>ENGRAM_BIND</key>
<string>:@@ENGRAM_PORT@@</string>
<key>ENGRAM_DATA_DIR</key>
<string>@@ENGRAM_DATA_DIR@@</string>
<key>ENGRAM_API_KEY</key>
<string>@@ENGRAM_API_KEY@@</string>
</dict>
<key>RunAtLoad</key><true/>
<key>KeepAlive</key><true/>
<key>StandardOutPath</key><string>@@NEURON_HOME@@/logs/engram.log</string>
<key>StandardErrorPath</key><string>@@NEURON_HOME@@/logs/engram.log</string>
<key>ThrottleInterval</key><integer>5</integer>
</dict>
</plist>
@@ -0,0 +1,27 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE plist PUBLIC "-//Apple//DTD PLIST 1.0//EN" "http://www.apple.com/DTDs/PropertyList-1.0.dtd">
<plist version="1.0">
<dict>
<key>Label</key>
<string>ai.neuron.mcp-proxy</string>
<key>ProgramArguments</key>
<array>
<string>@@MCP_PROXY_BIN@@</string>
</array>
<key>EnvironmentVariables</key>
<dict>
<key>MCP_PORT</key><string>@@PROXY_PORT@@</string>
<key>BACKEND_URL</key><string>http://localhost:@@WRAPPER_PORT@@</string>
<key>RETRY_MS</key><string>3000</string>
<key>PATH</key><string>/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/bin</string>
</dict>
<key>RunAtLoad</key><true/>
<key>KeepAlive</key><true/>
<key>ThrottleInterval</key><integer>5</integer>
<key>ExitTimeOut</key><integer>3</integer>
<key>StandardOutPath</key><string>@@NEURON_HOME@@/logs/mcp-proxy.out.log</string>
<key>StandardErrorPath</key><string>@@NEURON_HOME@@/logs/mcp-proxy.err.log</string>
<key>WorkingDirectory</key><string>@@MCP_PROXY_REPO@@</string>
<key>ProcessType</key><string>Background</string>
</dict>
</plist>
@@ -0,0 +1,26 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE plist PUBLIC "-//Apple//DTD PLIST 1.0//EN" "http://www.apple.com/DTDs/PropertyList-1.0.dtd">
<plist version="1.0">
<dict>
<key>Label</key>
<string>ai.neuron.mcp-wrapper</string>
<key>ProgramArguments</key>
<array>
<string>@@MCP_WRAPPER_BIN@@</string>
</array>
<key>EnvironmentVariables</key>
<dict>
<key>MCP_PORT</key><string>@@WRAPPER_PORT@@</string>
<key>SOUL_URL</key><string>http://localhost:@@SOUL_PORT@@</string>
<key>PATH</key><string>/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/bin</string>
</dict>
<key>RunAtLoad</key><true/>
<key>KeepAlive</key><true/>
<key>ThrottleInterval</key><integer>5</integer>
<key>ExitTimeOut</key><integer>3</integer>
<key>StandardOutPath</key><string>@@NEURON_HOME@@/logs/mcp-wrapper.out.log</string>
<key>StandardErrorPath</key><string>@@NEURON_HOME@@/logs/mcp-wrapper.err.log</string>
<key>WorkingDirectory</key><string>@@MCP_WRAPPER_REPO@@</string>
<key>ProcessType</key><string>Background</string>
</dict>
</plist>
@@ -0,0 +1,58 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE plist PUBLIC "-//Apple//DTD PLIST 1.0//EN" "http://www.apple.com/DTDs/PropertyList-1.0.dtd">
<plist version="1.0">
<dict>
<key>Label</key>
<string>ai.neuron.soul</string>
<key>Program</key>
<string>@@NEURON_HOME@@/bin/soul-wrapper.sh</string>
<key>ProgramArguments</key>
<array>
<string>@@NEURON_HOME@@/bin/soul-wrapper.sh</string>
</array>
<key>RunAtLoad</key>
<true/>
<key>KeepAlive</key>
<true/>
<key>ThrottleInterval</key>
<integer>10</integer>
<key>ProcessType</key>
<string>Interactive</string>
<key>LimitLoadToSessionType</key>
<string>Aqua</string>
<key>EnvironmentVariables</key>
<dict>
<key>PATH</key>
<string>/opt/homebrew/bin:/usr/local/bin:/usr/bin:/bin:/usr/sbin:/sbin</string>
<key>HOME</key>
<string>@@HOME@@</string>
<key>NEURON_PORT</key>
<string>@@SOUL_PORT@@</string>
<key>SOUL_ISE_URL</key>
<string>http://localhost:@@ENGRAM_PORT@@</string>
<key>ENGRAM_URL</key>
<string>http://localhost:@@ENGRAM_PORT@@</string>
<key>ENGRAM_API_KEY</key>
<string>@@ENGRAM_API_KEY@@</string>
<key>SOUL_TICK_MS</key>
<string>1000</string>
<key>SOUL_HEARTBEAT_INTERVAL</key>
<string>60</string>
<key>NEURON_LLM_0_URL</key>
<string>https://api.anthropic.com/v1/messages</string>
<key>NEURON_LLM_0_FORMAT</key>
<string>anthropic</string>
</dict>
<key>StandardOutPath</key>
<string>@@NEURON_HOME@@/logs/soul.out.log</string>
<key>StandardErrorPath</key>
<string>@@NEURON_HOME@@/logs/soul.err.log</string>
<key>WorkingDirectory</key>
<string>@@NEURON_REPO@@</string>
</dict>
</plist>
+56
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@@ -0,0 +1,56 @@
#!/usr/bin/env bash
#
# neuron-dev-setup / uninstall.sh
# Tears down the CORE dev stack this installer created. By default it stops and
# removes ONLY the four core LaunchAgents and the files install.sh laid down.
# It NEVER deletes your engram data unless you pass --purge-data.
#
# ./uninstall.sh # stop + remove core LaunchAgents and wrapper script
# ./uninstall.sh --purge-data # ALSO delete ~/.neuron/engram (destroys the brain!)
# ./uninstall.sh --keep-claude # leave ~/.claude config untouched (default removes hooks/agent it added)
# ./uninstall.sh --dry-run
# ─────────────────────────────────────────────────────────────────────────────
set -euo pipefail
SCRIPT_DIR="$(cd "$(dirname "${BASH_SOURCE[0]}")" && pwd)"
if [ -f "${SCRIPT_DIR}/config.env" ]; then source "${SCRIPT_DIR}/config.env"
elif [ -f "${SCRIPT_DIR}/config.env.example" ]; then source "${SCRIPT_DIR}/config.env.example"; fi
: "${NEURON_HOME:=${HOME}/.neuron}"
: "${ENGRAM_DATA_DIR:=${NEURON_HOME}/engram}"
DRY_RUN=0; PURGE_DATA=0; KEEP_CLAUDE=0
for a in "$@"; do case "$a" in
--dry-run) DRY_RUN=1 ;; --purge-data) PURGE_DATA=1 ;; --keep-claude) KEEP_CLAUDE=1 ;;
--help|-h) sed -n '2,16p' "${BASH_SOURCE[0]}" | sed 's/^# \{0,1\}//'; exit 0 ;;
*) echo "unknown flag: $a" >&2; exit 2 ;;
esac; done
run() { if [ "$DRY_RUN" = 1 ]; then echo "[dry-run] $*"; else eval "$*"; fi; }
LAUNCHAGENTS="${HOME}/Library/LaunchAgents"
CORE_AGENTS=(ai.neuron.mcp-proxy ai.neuron.mcp-wrapper ai.neuron.soul ai.neuron.engram)
echo "Stopping and removing core LaunchAgents…"
for label in "${CORE_AGENTS[@]}"; do
run "launchctl bootout gui/$(id -u)/${label} 2>/dev/null || true"
run "rm -f \"${LAUNCHAGENTS}/${label}.plist\""
echo " removed ${label}"
done
echo "Removing generated ~/.neuron/bin/soul-wrapper.sh…"
run "rm -f \"${NEURON_HOME}/bin/soul-wrapper.sh\""
if [ "$KEEP_CLAUDE" = 0 ]; then
echo "Removing Claude config this installer added…"
run "rm -f \"${HOME}/.claude/hooks/neuron-self-load.sh\" \"${HOME}/.claude/hooks/neuron-agent-preamble.sh\" \"${HOME}/.claude/hooks/pre-compact.sh\""
run "rm -f \"${HOME}/.claude/mcp.json.neuron\" \"${HOME}/.claude/settings.core.json\""
echo " (left ~/.claude/settings.json and ~/.claude/mcp.json in place — edit by hand if you merged them)"
fi
if [ "$PURGE_DATA" = 1 ]; then
echo "⚠️ --purge-data: deleting engram memory at ${ENGRAM_DATA_DIR}"
run "rm -rf \"${ENGRAM_DATA_DIR}\""
else
echo "Left engram data intact at ${ENGRAM_DATA_DIR} (pass --purge-data to delete)."
fi
echo "Done. Source repos under your DEV_ROOT were left untouched."
+54 -6
View File
@@ -15,6 +15,40 @@ fn flag_true(body: String, key: String) -> Bool {
return json_get_bool(body, key) || json_get_int(body, key) > 0
}
// ---------------------------------------------------------------------------
// plain_chat_envelope the JSON response contract for a non-agentic ("Tools: Off")
// chat turn. Every /api/chat dispatch that calls layered_cycle goes through here, so
// the three call sites cannot drift apart.
//
// WHY THE ENVELOPE IS BUILT HERE AND NOT INSIDE layered_cycle:
// layered_cycle returns the user-facing text AFTER safety_validate has acted on it.
// Keeping the JSON out of the cycle means the output gate always sees raw model text
// and never an escaped blob there is nothing to unwrap and re-wrap on the crisis
// path, which is exactly the failure mode that made wiring handle_chat unsafe.
// Escaping is the last thing that happens, strictly after the gate.
//
// FIELDS: `reply` and `response` carry the same validated text. Both are required by
// live clients the desktop app reads `reply` first (DaemonClient.parseChatResponse),
// while the CLI tools and the Telegram gateway read `response` (the gateway reads only
// `response`). Emitting one would break the other.
//
// EMPTY MEANS FAILURE, NOT AN EMPTY ANSWER: a hard bell returns the fixed crisis
// message and a soft bell is padded to non-empty by safety_validate, so the only way
// an empty string leaves the cycle is a failed model call. It is reported as an error
// rather than dressed up as a successful blank reply.
// ---------------------------------------------------------------------------
fn plain_chat_envelope(validated: String, model: String) -> String {
if str_eq(validated, "") {
return "{\"error\":\"llm unavailable\",\"reply\":\"\",\"response\":\"\",\"agentic\":false,\"tools_used\":[]}"
}
let safe: String = json_safe(validated)
return "{\"reply\":\"" + safe + "\""
+ ",\"response\":\"" + safe + "\""
+ ",\"model\":\"" + json_safe(model) + "\""
+ ",\"agentic\":false"
+ ",\"tools_used\":[]}"
}
// ---------------------------------------------------------------------------
// Rate limiting simple in-memory per-IP sliding window counter.
//
@@ -243,8 +277,14 @@ fn handle_dharma_recv(body: String) -> String {
} else if agentic_flag {
handle_chat_agentic(chat_body)
} else {
let screened_reply: String = layered_cycle(raw_msg)
screened_reply
// Non-agentic ("Tools: Off"): the full L1L2L3L1 cycle, which now generates
// at L3 instead of echoing. Envelope built outside the cycle see
// plain_chat_envelope.
// FIX B/E1 (2026-08-05): the cycle is told which conversation it is in, and
// whether this generation is conversation at all. Same two arguments at all
// three dispatch sites.
let screened_reply: String = layered_cycle(raw_msg, json_get(chat_body, "session_id"), is_utility_request(chat_body, json_get(chat_body, "session_id")))
plain_chat_envelope(screened_reply, chat_default_model())
}
auto_persist(chat_body, reply)
return reply
@@ -416,8 +456,11 @@ fn handle_request(method: String, path: String, body: String) -> String {
} else if agentic_flag {
handle_chat_agentic(body)
} else {
let screened_reply: String = layered_cycle(eff_msg)
screened_reply
// Non-agentic ("Tools: Off") same cycle and same envelope as POST.
// FIX B/E1: same threading. A GET probe usually carries no session_id, which
// resolves to the anonymous window the documented behaviour for this door.
let screened_reply: String = layered_cycle(eff_msg, json_get(body, "session_id"), is_utility_request(body, json_get(body, "session_id")))
plain_chat_envelope(screened_reply, chat_default_model())
}
auto_persist(body, reply)
return reply
@@ -580,8 +623,13 @@ fn handle_request(method: String, path: String, body: String) -> String {
} else if agentic_flag {
handle_chat_agentic(body)
} else {
let screened_reply: String = layered_cycle(raw_msg)
screened_reply
// Non-agentic ("Tools: Off") the app's DEFAULT mode (AgentMode.NEVER).
// Full L1L2L3L1 cycle with real generation at L3; envelope built
// outside the cycle so safety_validate always sees raw text.
// FIX B/E1: same threading. This is the app's main plain-chat door, so this
// is the site that ends the blank stare in practice.
let screened_reply: String = layered_cycle(raw_msg, json_get(body, "session_id"), is_utility_request(body, json_get(body, "session_id")))
plain_chat_envelope(screened_reply, chat_default_model())
}
auto_persist(body, reply)
return reply
+261
View File
@@ -0,0 +1,261 @@
#!/usr/bin/env bash
# verify-soul-contract.sh — the soul contract gate.
#
# TERMINOLOGY (canonical): the ENGRAM is the brain — the memory/knowledge-graph
# substrate. The binary this gate exercises is the SOUL — the runtime/reasoning
# engine compiled from dist/soul.c that serves the /api/ surface. The app
# (neuron-ui) bundles the soul binary at resources/<platform>/neuron.
#
# WHY THIS EXISTS
# For a while the soul binary was hand-dropped, and a stale one shipped: it
# 404'd several capability routes the app calls (knowledge-graph node
# update/delete, live-run narration, safety-contact, ...). This gate makes
# shipping a stale soul IMPOSSIBLE. It has two enforced sections:
# A. PRESENCE — every route the app calls must be ANSWERED (not 404, not
# the el-runtime "no handler"). This is the packaging gate:
# if it fails, do not package.
# B. IMMUTABILITY — engram nodes/memories are immutable by design. To
# "update" is to create a NEW node + a supersede EDGE back to
# the original; the original is KEPT. To "delete" is to
# supersede/tombstone, never hard-remove. A soul that
# hard-deletes an engram node is DEFECTIVE and fails the gate.
#
# SAFETY
# Never touches the live soul (:7770), live engram (:8742), or ~/.neuron.
# Boots on a throwaway port (default 7799) with HOME=$(mktemp -d), a throwaway
# engram snapshot, a non-genesis cgi id, no ENGRAM_URL (so it uses its own
# in-process store, never the live server), NEURON_API_URL pointed at a dead
# port, and no ANTHROPIC_API_KEY (so no probe triggers a real LLM call).
# Connectors proxy to a HARDCODED 127.0.0.1:7771 (no env override): those
# sub-routes are probed with GET, which the soul maps to a read-only
# connectd_get, so this gate never writes to a running connectd bridge.
#
# USAGE
# scripts/verify-soul-contract.sh <path-to-soul-binary> [port]
# exit 0 = all required routes answered AND no destructive engram mutation;
# non-zero = a route is missing (presence) or a mutation route hard-deletes.
set -uo pipefail
SOUL="${1:?usage: verify-soul-contract.sh <soul-binary> [port]}"
PORT="${2:-7799}"
if [ "$PORT" = "7770" ] || [ "$PORT" = "8742" ] || [ "$PORT" = "7771" ]; then
echo "REFUSING: port $PORT is a live service port. Use a throwaway port." >&2
exit 2
fi
if [ ! -x "$SOUL" ]; then echo "not executable: $SOUL" >&2; exit 2; fi
BASE="http://127.0.0.1:$PORT"
THROW_HOME="$(mktemp -d "${TMPDIR:-/tmp}/soul-contract-home.XXXXXX")"
SOUL_LOG="$(mktemp "${TMPDIR:-/tmp}/soul-contract-log.XXXXXX")"
SOUL_PID=""
cleanup() {
[ -n "$SOUL_PID" ] && kill "$SOUL_PID" 2>/dev/null
[ -n "$SOUL_PID" ] && { sleep 0.3; kill -9 "$SOUL_PID" 2>/dev/null; }
rm -rf "$THROW_HOME" "$SOUL_LOG"
}
trap cleanup EXIT INT TERM
# =============================================================================
# THE CONTRACT — routes the app (neuron-ui/src/main/kotlin/ai/neuron/ui/*.kt)
# calls against the soul ($SOUL). Format: "METHOD PATH".
#
# EXCLUDED and why:
# /api/auth, /api/auth/status, /api/dispatch, /api/tasks
# -> served by the APP's own DispatchServer.kt (localhost:8080), not the
# soul. Not soul routes.
# /api/tags
# -> not handled by any soul .el (app-side/other). Pre-verified excluded.
# /api/neuron/, /api/neuron/node/, /api/connectors/ (bare prefixes)
# -> base-path string constants used to build the concrete routes below.
#
# KNOWN-PENDING (probed + reported, NON-blocking):
# POST /api/engram/import -> the app's "Restore memory" path. No soul handler
# yet, and the app hides Restore from shipped builds (B3, "lands in an
# update"). Reported so we see it; does not block packaging.
#
# Connectors sub-routes are listed as GET (see SAFETY note): handle_connectors is
# monolithic, so a GET reaching it proves the whole connectors surface without
# writing to the live bridge. Binary-strings cross-check confirms each POST
# sub-path literal is compiled in.
# =============================================================================
REQUIRED=(
"GET /api/graph/nodes"
"GET /api/graph/edges"
"POST /api/chat"
"GET /api/config"
"POST /api/see"
"GET /api/connectors"
"GET /api/connectors/add"
"GET /api/connectors/toggle"
"GET /api/connectors/auto-approve"
"GET /api/connectors/remove"
"GET /api/connectors/secret"
"GET /api/connectors/oauth/start"
"GET /api/connectors/call"
"POST /api/neuron/memory"
"POST /api/neuron/memory/update"
"POST /api/neuron/memory/delete"
"POST /api/neuron/node/create"
"POST /api/neuron/node/update"
"POST /api/neuron/node/delete"
"POST /api/neuron/knowledge/capture"
"POST /api/neuron/knowledge/evolve"
"POST /api/neuron/knowledge/promote"
"POST /api/neuron/processes/define"
"GET /api/run-progress/__contract_probe__"
"GET /api/safety-contact"
"POST /api/safety-contact"
"GET /api/sessions/__contract_probe__"
)
KNOWN_PENDING=(
"POST /api/engram/import"
)
# --- boot the soul -----------------------------------------------------------
# Preserve the ambient environment (PATH, LD_LIBRARY_PATH, TMPDIR) so the
# dynamically-linked soul finds its libs on any runner — using `env -i` here
# stripped the library path on the Linux CI runner and the soul never booted.
# Isolation is still guaranteed by UNSETTING the live-service vars (so it can
# never reach the real engram/axon or make an LLM call) and by pointing HOME +
# the snapshot at throwaway paths and the axon at a dead port.
#
# ISOLATION FIX (2026-08-03): unsetting ENGRAM_URL/SOUL_ENGRAM_URL is NOT enough.
# The periodic engram sync (awareness.el) resolves its source as
# env(SOUL_ISE_URL) -> state(soul_engram_url) -> DEFAULT http://localhost:8742
# so with those vars unset it silently pulls the LIVE engram (:8742) if that
# server is up — the throwaway graph ballooned 56 -> 12k live nodes within
# seconds, and the concurrent live-sync mutation both (a) broke test determinism
# (the low-salience tombstone marker fell past the 9999 scan cap) and (b) meant
# the "isolated" gate was reading the operator's live brain. Pin SOUL_ISE_URL to
# the dead axon port so the sync target is unreachable: the soul stays on its own
# in-process store, the gate is genuinely isolated, and Section B is deterministic.
echo "== booting soul: $SOUL on port $PORT (throwaway HOME=$THROW_HOME) =="
env \
-u ENGRAM_URL -u ENGRAM_API_KEY -u SOUL_ENGRAM_URL \
-u ANTHROPIC_API_KEY -u NEURON_LLM_API_KEY -u SOUL_IDENTITY \
HOME="$THROW_HOME" \
NEURON_PORT="$PORT" \
SOUL_CGI_ID="ntn-contract-$$" \
SOUL_ENGRAM_PATH="$THROW_HOME/throwaway-snapshot.json" \
NEURON_API_URL="http://127.0.0.1:9" \
SOUL_ISE_URL="http://127.0.0.1:9" \
SOUL_TICK_MS="3600000" SOUL_HEARTBEAT_MS="3600000" SOUL_REFRESH_MS="3600000" \
"$SOUL" >"$SOUL_LOG" 2>&1 &
SOUL_PID=$!
UP=0
for _ in $(seq 1 60); do
if ! kill -0 "$SOUL_PID" 2>/dev/null; then
echo "!! soul exited during boot. log tail:" >&2; tail -20 "$SOUL_LOG" >&2; exit 3
fi
RSS=$(ps -o rss= -p "$SOUL_PID" 2>/dev/null | tr -d ' ')
if [ -n "$RSS" ] && [ "$RSS" -gt $((3*1024*1024)) ]; then
echo "!! soul RSS >3GB — kill -9" >&2; kill -9 "$SOUL_PID" 2>/dev/null; exit 3
fi
[ "$(curl -s -o /dev/null -w '%{http_code}' -m 2 "$BASE/health" 2>/dev/null)" = "200" ] && { UP=1; break; }
sleep 0.5
done
[ "$UP" = 1 ] || { echo "!! soul never healthy on $BASE/health" >&2; tail -20 "$SOUL_LOG" >&2; exit 3; }
echo "== soul healthy =="; echo
# --- probing helpers ---------------------------------------------------------
# request METHOD PATH [BODY] -> prints response body (single line)
request() {
curl -s -m 12 -X "$1" -H 'Content-Type: application/json' --data "${3:-{}}" "$BASE$2" 2>/dev/null | tr -d '\n'
}
# is_missing BODY -> 0 if the body is a "route not present" signal
is_missing() {
printf '%s' "$1" | grep -qE '"error":"not found"|"code":"not_found"|no http handler registered|"code":"method_not_allowed"'
}
extract_id() { printf '%s' "$1" | grep -oE '"id":"[^"]+"' | head -1 | sed 's/.*"id":"//;s/"//'; }
# BY-ID immutability verification (#199 by-id gate).
# The prior check grepped /api/graph/nodes, i.e. engram_scan_nodes_json(9999,0):
# a whole-graph dump. On a genesis-seeded throwaway engram that list is both
# huge (multi-MB, full node content + embeddings) AND capped at 9999 nodes in
# salience order. The tombstone MARKER is written at salience 0.01, so it sorts
# dead last — and once the seeded graph approaches/exceeds the cap the marker
# falls off the end of the list entirely (or is lost to transport truncation on
# the ~10MB body). The normal-salience original still sorts early and survives,
# which is why a correctly-tombstoning soul false-reported "kept but no tombstone
# marker". Fix: verify BY ID via /api/neuron/graph?id=<id>&depth=1
# (engram_neighbors_json, direction "both"), a compact ~900B neighborhood that is
# independent of total graph size. The node itself proves KEPT; the incoming
# "tombstones" edge surfaces the "tombstone:<id>" marker. Pass/fail semantics are
# unchanged and strictly no weaker: a hard-delete leaves no by-id node (DESTROYED)
# and a no-op delete leaves no marker (NO-OP) — both still fail. Verified: a
# never-created id returns neither node nor marker.
node_present() { # id -> 0 if the node still resolves by-id (KEPT), non-zero if hard-removed
request GET "/api/neuron/graph?id=$1&depth=1" | grep -qF "\"$1\""
}
# --- SECTION A: presence -----------------------------------------------------
run_presence() {
local -n arr=$1; local fail=0
printf ' %-8s %-42s %s\n' "METHOD" "ROUTE" "RESULT"
for e in "${arr[@]}"; do
local m p body; m=$(awk '{print $1}' <<<"$e"); p=$(awk '{print $2}' <<<"$e")
body=$(request "$m" "$p")
if is_missing "$body"; then
printf ' %-8s %-42s MISSING %s\n' "$m" "$p" "$(cut -c1-46 <<<"$body")"; fail=$((fail+1))
else
printf ' %-8s %-42s ANSWERED %s\n' "$m" "$p" "$(cut -c1-46 <<<"$body")"
fi
done
return $fail
}
echo "== SECTION A: PRESENCE (required, blocking) =="
run_presence REQUIRED; A_FAIL=$?
echo
echo "== KNOWN-PENDING (non-blocking) =="
run_presence KNOWN_PENDING; P_FAIL=$?
echo
# --- SECTION B: immutability (engram write routes must supersede, not destroy) --
# For each mutation route: create a node, mutate it, then check the ORIGINAL id
# still exists in the graph. KEPT = supersede/tombstone (correct). DESTROYED =
# hard delete (DEFECTIVE -> fail). N/A = mutate route absent (a presence failure).
# For "delete" mutations we additionally require a real tombstone marker
# (label "tombstone:<id>") so a no-op delete cannot false-pass as KEPT.
marker_present() { # id -> 0 if a "tombstone:<id>" marker is wired to the node (by-id neighborhood)
request GET "/api/neuron/graph?id=$1&depth=1" | grep -qF "tombstone:$1"
}
immut_check() { # label KIND(update|delete) CREATE_PATH MUTATE_PATH
local label="$1" kind="$2" create="$3" mutate="$4"
local cbody id mb mbody
cbody=$(request POST "$create" "{\"content\":\"__immut_${label}__\",\"node_type\":\"Memory\",\"label\":\"contract:immut\"}")
id=$(extract_id "$cbody")
if [ -z "$id" ]; then printf ' %-14s SKELETON-FAIL create returned no id: %s\n' "$label" "$(cut -c1-40 <<<"$cbody")"; return 2; fi
mb="{\"id\":\"$id\"}"; [ "$kind" = update ] && mb="{\"id\":\"$id\",\"content\":\"__immut_${label}_v2__\"}"
mbody=$(request POST "$mutate" "$mb")
if is_missing "$mbody"; then printf ' %-14s N/A mutate route absent (see Section A)\n' "$label"; return 0; fi
if ! node_present "$id"; then
printf ' %-14s DESTROYED original %s hard-removed <== DEFECTIVE\n' "$label" "$id"; return 1
fi
if [ "$kind" = delete ] && ! marker_present "$id"; then
printf ' %-14s NO-OP original %s kept but no tombstone marker <== DEFECTIVE\n' "$label" "$id"; return 1
fi
local how="supersede edge"; [ "$kind" = delete ] && how="tombstoned + hidden from default list"
printf ' %-14s KEPT original %s survived (%s)\n' "$label" "$id" "$how"; return 0
}
echo "== SECTION B: IMMUTABILITY (engram nodes must be superseded, never destroyed) =="
B_FAIL=0
immut_check "memory-update" update /api/neuron/memory /api/neuron/memory/update || B_FAIL=$((B_FAIL+$?))
immut_check "memory-delete" delete /api/neuron/memory /api/neuron/memory/delete || B_FAIL=$((B_FAIL+$?))
immut_check "node-update" update /api/neuron/node/create /api/neuron/node/update || B_FAIL=$((B_FAIL+$?))
immut_check "node-delete" delete /api/neuron/node/create /api/neuron/node/delete || B_FAIL=$((B_FAIL+$?))
immut_check "memory-forget" delete /api/neuron/memory /api/neuron/memory/forget || B_FAIL=$((B_FAIL+$?))
echo
echo "============================================================"
RC=0
if [ "$A_FAIL" -gt 0 ]; then echo "PRESENCE: FAIL — $A_FAIL required route(s) unanswered. Do NOT package."; RC=1
else echo "PRESENCE: PASS — all ${#REQUIRED[@]} required routes answered."; fi
if [ "$B_FAIL" -gt 0 ]; then echo "IMMUTABILITY: FAIL — $B_FAIL engram write route(s) hard-delete. DEFECTIVE soul."; RC=1
else echo "IMMUTABILITY: PASS — no engram write route hard-deletes."; fi
[ "$P_FAIL" -gt 0 ] && echo "note: $P_FAIL known-pending route(s) unanswered (expected; non-blocking)."
echo "============================================================"
[ "$RC" = 0 ] && echo "GATE: PASS" || echo "GATE: FAIL"
exit $RC
+12 -1
View File
@@ -677,6 +677,11 @@ fn handle_session_approve(session_id: String, body: String) -> String {
// path for all sessions created through handle_chat_agentic / agentic_loop.
let bridge_blob: String = state_get("mcp_bridge:" + session_id)
if !str_eq(bridge_blob, "") {
// BUG-LEAK fix (2026-07-16): the approved tool executes below via dispatch_tool,
// whose path/command guards read the shared workspace-root key. Re-assert THIS
// session's own root first an approval must never execute under whatever root
// the last unrelated request left behind.
state_set("agent_workspace_root", state_get("agent_workspace_root_" + session_id))
// For "always": record tool_name in the always-allow list before resuming.
// The tool_name is not stored in the bridge blob (only tool_use_id is).
// Accept it from the body so the client can pass it along.
@@ -708,7 +713,13 @@ fn handle_session_approve(session_id: String, body: String) -> String {
// For builtin tools with no client-provided content: fall back to
// dispatch_tool so those tools still execute correctly.
let client_content: String = json_get(body, "content")
let use_client_content: Bool = !str_eq(client_content, "")
// BUG-6 fix (2026-07-17): the naive json_get scanner matches "content" ANYWHERE
// in the body including INSIDE tool_input so every approved write_file (whose
// input always carries a content field) was mistaken for client-executed, never
// dispatched, and narrated as done: a false receipt with no file on disk. Builtin
// tools now ALWAYS dispatch server-side; client content is only honored for
// non-builtin (MCP/client-executed) tools. Stricter only.
let use_client_content: Bool = !str_eq(client_content, "") && !is_builtin_tool(approve_tool_name)
let use_dispatch: Bool = is_builtin_tool(approve_tool_name) && !use_client_content
let raw_input: String = json_get_raw(body, "tool_input")
let eff_input: String = if str_eq(raw_input, "") { "{}" } else { raw_input }
+72 -36
View File
@@ -379,9 +379,23 @@ fn emit_session_start_event() -> Void {
// layered_cycle routes user-facing requests through the 4-layer consciousness stack.
// L0 (core) L1 (safety screen) L2a (continuity + behavioral profiling) L2b (mission alignment) L3 (imprint) L1 (safety validate)
// Internal cognition (heartbeat, proactive, memory ops) bypasses layers use one_cycle directly.
fn layered_cycle(raw_input: String) -> String {
let history: String = state_get("conv_history")
let session_id: String = state_get("current_session_id")
//
// FIX B (2026-08-05) the cycle now knows which conversation it is in.
//
// session_id: the caller's session, threaded from the route. Was previously read from the
// state key "current_session_id", which is read HERE and written NOWHERE in the entire
// source verified across every .el file. So this value was unconditionally "", and every
// downstream consumer of it silently fell back to a process-global bucket: conversation
// history, and the steward's continuity tracking (TODO reliability #4, below, describes the
// cross-session bleed this caused; threading the real id closes it). The plain path's blank
// stare and the agentic path's scoped history were the same defect seen from two sides.
//
// utility: true when the generation is not part of the user's conversation the app's
// title and insight passes. Answered normally, never recorded. See is_utility_request.
fn layered_cycle(raw_input: String, session_id: String, utility: Bool) -> String {
// Safety-screen history amplification now reads the SAME window the turn will be
// recorded into, so a session's own escalation pattern is what gets scored.
let history: String = state_get(conv_hist_key(session_id))
// L1 in: safety screen
let screen_result: String = safety_screen(raw_input, history)
@@ -423,8 +437,10 @@ fn layered_cycle(raw_input: String) -> String {
let cont_action: String = json_get(continuity, "action")
// Store continuity status so imprint can adjust its response register.
// TODO(reliability #4): session_continuity is process-global; scope per session_id
// when available to prevent cross-session bleed under concurrent layered_cycle calls.
// TODO(reliability #4) CLOSED 2026-08-05: this line was already written to scope per
// session it just never received a session id, because the only source was a state key
// nothing wrote. It is now threaded from the route, so named sessions genuinely get their
// own continuity state and only anonymous callers share the global one.
let cont_key: String = if str_eq(session_id, "") { "session_continuity" } else { "session_continuity:" + session_id }
state_set(cont_key, cont_status)
@@ -453,40 +469,24 @@ fn layered_cycle(raw_input: String) -> String {
let lc_aff_cutoff: Int = time_now() - 259200
let lc_bell_nodes: String = engram_search_json("bell:soft bell:hard BellEvent affective", 2)
let lc_has_bell: Bool = !str_eq(lc_bell_nodes, "") && !str_eq(lc_bell_nodes, "[]")
// CRASH FIX 2026-08-05 (BUG-PLAINCHAT-1): the " | ts:" parser used to be inline here.
// Inside this block-expression initializer elc compiled `lbmp + str_len(lbm)` to
// el_str_concat() on two integers, which segfaulted the whole daemon the moment a
// distress turn followed an earlier affective turn i.e. exactly on the crisis path.
// Verified against the unmodified baseline binary AND present in the committed
// dist/soul.c. affective_node_ts() is a top-level function, where the same expression
// compiles to integer addition. Do not inline it back.
let lc_bell_note: String = if lc_has_bell {
let lb0: String = json_array_get(lc_bell_nodes, 0)
let lb_c: String = json_get(lb0, "content")
let lbm: String = " | ts:"
let lbmp: Int = str_index_of(lb_c, lbm)
let lb_ts_raw: String = if lbmp >= 0 {
let lbs: Int = lbmp + str_len(lbm)
let lbr: String = str_slice(lb_c, lbs, str_len(lb_c))
let lbn: Int = str_index_of(lbr, " | ")
if lbn < 0 { lbr } else { str_slice(lbr, 0, lbn) }
} else {
let lbca: String = json_get(lb0, "created_at")
if str_eq(lbca, "") { json_get(lb0, "updated_at") } else { lbca }
}
let lb_ts: Int = if str_eq(lb_ts_raw, "") { 0 } else { str_to_int(lb_ts_raw) }
let lb_ts: Int = affective_node_ts(lb0)
if lb_ts > lc_aff_cutoff { "[AFFECTIVE NOTE: User was in distress in a recent session.]" } else { "" }
} else { "" }
let lc_pos_nodes: String = engram_search_json("PositiveEvent joy:high joy:low affective", 2)
let lc_has_pos: Bool = !str_eq(lc_pos_nodes, "") && !str_eq(lc_pos_nodes, "[]")
// Same crash fix as the bell note above (BUG-PLAINCHAT-1).
let lc_pos_note: String = if lc_has_pos && str_eq(lc_bell_note, "") {
let lp0: String = json_array_get(lc_pos_nodes, 0)
let lp_c: String = json_get(lp0, "content")
let lpm: String = " | ts:"
let lpmp: Int = str_index_of(lp_c, lpm)
let lp_ts_raw: String = if lpmp >= 0 {
let lps: Int = lpmp + str_len(lpm)
let lpr: String = str_slice(lp_c, lps, str_len(lp_c))
let lpn: Int = str_index_of(lpr, " | ")
if lpn < 0 { lpr } else { str_slice(lpr, 0, lpn) }
} else {
let lpca: String = json_get(lp0, "created_at")
if str_eq(lpca, "") { json_get(lp0, "updated_at") } else { lpca }
}
let lp_ts: Int = if str_eq(lp_ts_raw, "") { 0 } else { str_to_int(lp_ts_raw) }
let lp_ts: Int = affective_node_ts(lp0)
if lp_ts > lc_aff_cutoff { "[AFFECTIVE NOTE: User shared positive news in a recent session.]" } else { "" }
} else { "" }
let lc_affective_note: String = if !str_eq(lc_bell_note, "") { lc_bell_note } else { lc_pos_note }
@@ -498,11 +498,47 @@ fn layered_cycle(raw_input: String) -> String {
}
state_set("layered_cycle_safety_system_addendum", augmented_addendum)
// L3: imprint responds
let output: String = imprint_respond(aligned, imprint_id)
// L3: imprint responds applies the active imprint's voice/domain annotation to the
// steward-aligned input. This produces the PROMPT, not the answer.
let prompt: String = imprint_respond(aligned, imprint_id)
// L1 out: validate output before delivery
return safety_validate(output, screen_action)
// L3b: the imprint SPEAKS (added 2026-08-05).
//
// Until now the cycle stopped at the annotation above, so /api/chat with agentic:false
// handed the user's own screened text back as the "reply" every gate ran, but nothing
// ever generated. The generation is placed HERE, inside the cycle, rather than by
// pointing the route at handle_chat(): handle_chat has no enforcing input gate and no
// enforcing output gate, so calling it instead of this cycle would have traded the whole
// safety pipeline for a working reply. Composing keeps both.
//
// Order is deliberate and must not be rearranged: this call sits strictly AFTER the L1
// screen, the safe-mode guard, the hard-bell short-circuit and the L2 stewardship layers,
// and strictly BEFORE the L1 output gate. A hard bell never reaches a model the branch
// above returns first. Tools are not offered on this turn; see layered_generate.
let output: String = layered_generate(prompt, imprint_id, session_id)
// L1 out: validate output before delivery. Still the terminal gate nothing below this
// line can change the string this function returns.
let validated: String = safety_validate(output, screen_action)
// Turn bookkeeping. Records the VALIDATED text, never the raw model output, and is only
// reachable on the non-bell path: both bell branches above return before this point, so
// bell turns still never enter conversation history. Pure state side effect it cannot
// alter what is returned.
//
// FIX A: the receipt is unconditional and always negative on this path, because on this
// path it is structurally true layered_generate offers no tools at all (build_system_prompt
// chat mode + a request body with no "tools" key). Recording "no tools ran" is not padding:
// it is the only thing that distinguishes "nothing ran" from "we forgot to write down what
// ran", and that ambiguity is what made the model confess to a search it had performed.
//
// FIX E1: a utility generation is answered but not recorded. Guarded here rather than at
// the route so every /api/chat dispatch site inherits it from one place.
let receipt: String = tool_receipt("", "")
if !utility {
conv_history_record(session_id, raw_input, validated, receipt)
}
return validated
}
let soul_cgi_id_raw: String = env("SOUL_CGI_ID")
@@ -521,7 +557,7 @@ let axon_raw: String = env("NEURON_API_URL")
let axon_base: String = if str_eq(axon_raw, "") { "http://localhost:7771" } else { axon_raw }
let studio_dir_raw: String = env("SOUL_STUDIO_DIR")
let studio_dir: String = if str_eq(studio_dir_raw, "") { "/Users/will/Development/neuron-technologies/products/cgi-studio/el-daemon" } else { studio_dir_raw }
let studio_dir: String = if str_eq(studio_dir_raw, "") { env("HOME") + "/Development/neuron-technologies/products/cgi-studio/el-daemon" } else { studio_dir_raw }
println("[soul] boot - cgi=" + soul_cgi_id + " port=" + int_to_str(port))
+3 -1
View File
@@ -1,6 +1,8 @@
// auto-generated by elc --emit-header - do not edit
extern fn init_soul_edges() -> Void
extern fn ensure_self_canonical_bridge() -> Void
extern fn aff_try_slot(slot_json: String, aff_7d_ts: Int, acc_key: String) -> Void
extern fn load_identity_context() -> Void
extern fn seed_persona_from_env() -> Void
extern fn emit_session_start_event() -> Void
extern fn layered_cycle(raw_input: String) -> String
extern fn layered_cycle(raw_input: String, session_id: String, utility: Bool) -> String
+28
View File
@@ -0,0 +1,28 @@
# El Compiler Release v1.0.0 — 2026-05-02
## Components
- `bootstrap.py` — El language compiler (Python, recursive descent parser, emits C)
- `el_runtime.c` — El runtime (C, HTTP server, engram, DHARMA, LLM chain)
- `el_runtime.h` — Runtime public API header
## Changes in this release
### Critical bug fixes
- `state_set`/`state_get` are now thread-safe (pthread_mutex). Was racing across 64 worker threads.
- `looks_like_string` threshold raised from 1,000,000 to 4GB. Unix timestamps were being dereferenced as heap pointers.
- `fs_read` guards against negative `ftell` result (pipe/special file overflow).
### Engram architecture (major)
- Two-layer activation: `background_activation` (Layer 1, broad fan-out) + `working_memory_weight` (Layer 2, executive filter)
- Inhibitory edges: `EngramEdge.inhibitory` flag suppresses working memory promotion without affecting background activation
- Suppression memory: `suppression_count` — nodes activated-but-suppressed accumulate pressure toward breakthrough
- Temporal decay: `temporal_decay_rate`, `created_at`, `last_activated_at`, `activation_count` on EngramNode
- Per-type activation thresholds (Safety: 0.05, Canonical: 0.15, Lesson: 0.25, Note: 0.40)
- Temporal range query: `engram_query_range(start_ms, end_ms)`
- Layered consciousness: `EngramLayer` struct, `layer_id` on nodes and edges, `EngramStore.layers[]`
- Layer 0 override pass: safety layer fires last and cannot be suppressed
## SHA256
bootstrap.py
el_runtime.c
el_runtime.h
File diff suppressed because it is too large Load Diff
+786
View File
@@ -0,0 +1,786 @@
/*
* el_runtime.h El language C runtime header
*
* Declares all built-in functions available to compiled El programs.
* Include this in every generated .c file.
*
* Value model:
* All El values are represented as el_val_t (= int64_t).
* On 64-bit systems a pointer fits in int64_t.
* String values are cast: (el_val_t)(uintptr_t)"hello"
* Integer values are stored directly.
* This lets arithmetic work naturally while still passing strings around.
*
* Type conventions (El -> C):
* String -> el_val_t (holds const char* via uintptr_t cast)
* Int -> el_val_t
* Bool -> el_val_t (0 = false, nonzero = true)
* Any -> el_val_t
* Void -> void
*
* Macros for convenience:
* EL_STR(s) cast string literal to el_val_t
* EL_CSTR(v) cast el_val_t back to const char*
* EL_INT(v) identity el_val_t is already int64_t
*
* Link requirements:
* -lcurl required for the HTTP client (http_get, http_post, llm_*).
* -lpthread required for the HTTP server (one detached thread per
* connection, capped at 64 concurrent).
* -loqs optional; required only when liboqs is installed and the
* pq_* / sha3_256_hex entry points are needed. Detected at
* compile time via __has_include(<oqs/oqs.h>).
* -lcrypto optional; pulled in alongside -loqs. Used for X25519 in
* pq_hybrid_* and HKDF-SHA256 derivation.
*
* Canonical compile command:
* cc -std=c11 -I el-compiler/runtime -lcurl -lpthread \
* -o <out> <prog>.c el-compiler/runtime/el_runtime.c
*
* With liboqs (post-quantum stack):
* cc -std=c11 -I el-compiler/runtime -lcurl -lpthread -loqs -lcrypto \
* -o <out> <prog>.c el-compiler/runtime/el_runtime.c
*/
#pragma once
#include <stdint.h>
#include <stdlib.h>
typedef int64_t el_val_t;
#define EL_STR(s) ((el_val_t)(uintptr_t)(s))
#define EL_CSTR(v) ((const char*)(uintptr_t)(v))
#define EL_INT(v) (v)
#define EL_NULL ((el_val_t)0)
/* Float values share the el_val_t (int64) slot via a bit-cast.
* The codegen emits Float literals as `el_from_float(<dbl>)` so the
* underlying bits represent the IEEE 754 double. Float-aware builtins
* (math, format, json) round-trip via these helpers. */
static inline double el_to_float(el_val_t v) {
union { int64_t i; double f; } u;
u.i = (int64_t)v;
return u.f;
}
static inline el_val_t el_from_float(double f) {
union { double f; int64_t i; } u;
u.f = f;
return (el_val_t)u.i;
}
#ifdef __cplusplus
extern "C" {
#endif
/* ── I/O ──────────────────────────────────────────────────────────────────── */
void println(el_val_t s);
void print(el_val_t s);
el_val_t readline(void);
/* ── String builtins ─────────────────────────────────────────────────────── */
el_val_t el_str_concat(el_val_t a, el_val_t b);
el_val_t str_eq(el_val_t a, el_val_t b);
el_val_t str_starts_with(el_val_t s, el_val_t prefix);
el_val_t str_ends_with(el_val_t s, el_val_t suffix);
el_val_t str_len(el_val_t s);
el_val_t str_concat(el_val_t a, el_val_t b);
el_val_t int_to_str(el_val_t n);
el_val_t str_to_int(el_val_t s);
el_val_t str_slice(el_val_t s, el_val_t start, el_val_t end);
el_val_t str_contains(el_val_t s, el_val_t sub);
el_val_t str_replace(el_val_t s, el_val_t from, el_val_t to);
el_val_t str_to_upper(el_val_t s);
el_val_t str_to_lower(el_val_t s);
el_val_t str_trim(el_val_t s);
/* ── Math ────────────────────────────────────────────────────────────────── */
el_val_t el_abs(el_val_t n);
el_val_t el_max(el_val_t a, el_val_t b);
el_val_t el_min(el_val_t a, el_val_t b);
/* ── Refcount (ARC) ──────────────────────────────────────────────────────────
* Lists and Maps carry a refcount. Strings and ints do not el_retain and
* el_release are safe no-ops on non-refcounted values (they sniff a magic
* header at offset 0 and only act if the magic matches).
*
* Codegen emits these at let-binding shadowing, function entry (params), and
* function exit (locals other than the returned value). The refcount lets
* el_list_append and el_map_set mutate in place when uniquely owned (cheap)
* and copy-on-write when shared (preserves persistent semantics across
* accumulator patterns in the compiler itself). */
void el_retain(el_val_t v);
void el_release(el_val_t v);
/* ── Arena scoping ────────────────────────────────────────────────────────────
* el_arena_push() activates the string arena (if not already active) and
* returns a mark; el_arena_pop(mark) frees all strings allocated since that
* mark. Used by codegen for per-function/statement scoping and by long-running
* EL loops (e.g. the soul daemon's awareness tick) to reclaim per-iteration
* allocations. */
el_val_t el_arena_push(void);
el_val_t el_arena_pop(el_val_t mark);
/* ── List ────────────────────────────────────────────────────────────────── */
el_val_t el_list_new(el_val_t count, ...);
el_val_t el_list_len(el_val_t list);
el_val_t el_list_get(el_val_t list, el_val_t index);
el_val_t el_list_append(el_val_t list, el_val_t elem);
el_val_t el_list_empty(void);
el_val_t el_list_clone(el_val_t list);
/* ── Map ─────────────────────────────────────────────────────────────────── */
el_val_t el_map_new(el_val_t pair_count, ...);
el_val_t el_get_field(el_val_t map, el_val_t key);
el_val_t el_map_get(el_val_t map, el_val_t key);
el_val_t el_map_set(el_val_t map, el_val_t key, el_val_t value);
/* ── HTTP ─────────────────────────────────────────────────────────────────── */
el_val_t http_get(el_val_t url);
el_val_t http_post(el_val_t url, el_val_t body);
el_val_t http_post_json(el_val_t url, el_val_t json_body);
el_val_t http_get_with_headers(el_val_t url, el_val_t headers_map);
el_val_t http_post_with_headers(el_val_t url, el_val_t body, el_val_t headers_map);
el_val_t http_post_form_auth(el_val_t url, el_val_t form_body, el_val_t auth_header);
el_val_t http_delete(el_val_t url);
el_val_t http_delete_json(el_val_t url, el_val_t json_body);
void http_serve(el_val_t port, el_val_t handler);
void http_set_handler(el_val_t name);
/* HTTP server v2 ─────────────────────────────────────────────────────────────
* Same dispatch model as http_serve, but the handler signature is widened:
*
* el_val_t handler(method, path, headers_map, body)
*
* `headers_map` is an ElMap from lowercased header name header value (both
* Strings). Repeated headers are joined with ", " per RFC 7230.
*
* Response value: the handler may return either
* (a) a plain body string same auto-content-type / 200-OK behaviour as
* http_serve (3-arg) or
* (b) a response envelope built with `http_response(status, headers_json,
* body)`. The runtime detects the envelope discriminator
* `"el_http_response":1` at the start of the returned string and
* unpacks status / headers / body before sending.
*
* The 3-arg http_serve(port, handler) remains supported unchanged for
* existing handlers (e.g. products/web/server.el): it dispatches with
* (method, path, body), hardcodes 200 OK, and auto-detects content type. */
void http_serve_v2(el_val_t port, el_val_t handler);
void http_set_handler_v2(el_val_t name);
/* Non-blocking variant of http_serve: runs the accept loop in a background
* pthread and returns immediately so the caller can continue (used by the
* soul daemon to run awareness_run() after starting its HTTP API). */
void http_serve_async(el_val_t port, el_val_t handler);
/* Build an HTTP response envelope. `headers_json` should be a JSON object
* literal like `{"WWW-Authenticate":"Basic"}` (or "" / "{}" for none). The
* returned string carries the discriminator `{"el_http_response":1,...}`
* which the runtime's send-path detects and unpacks. Detection happens
* uniformly inside http_send_response, so a 3-arg handler may also return
* an envelope. The 3-arg variant remains documented as a fixed 200-OK
* auto-content-type contract for legacy handlers that return plain bodies. */
el_val_t http_response(el_val_t status, el_val_t headers_json, el_val_t body);
/* HTTP timeout — every libcurl request honors EL_HTTP_TIMEOUT_MS (default
* 60000ms). Read lazily on first use, so setting the env var any time before
* the first http_* call is sufficient. */
/* Streaming variants — write the response body straight to a file via
* libcurl's CURLOPT_WRITEFUNCTION = fwrite. These bypass the el_val_t string
* wrapper entirely, so binary payloads (audio/mpeg, image/png, etc.) survive
* embedded NUL bytes that would truncate a strlen()-based code path.
*
* Both honor EL_HTTP_TIMEOUT_MS, follow redirects, and accept the same
* `headers_map` shape as http_post_with_headers (ElMap of StringString).
*
* Return value: 1 on success (file fully written), 0 on any failure
* (network, file open, partial write). On failure the output file is removed
* so callers cannot mistake a partially-written file for a valid one. */
el_val_t http_post_to_file(el_val_t url, el_val_t body, el_val_t headers_map, el_val_t output_path);
el_val_t http_get_to_file(el_val_t url, el_val_t headers_map, el_val_t output_path);
/* ── URL encoding ────────────────────────────────────────────────────────── */
el_val_t url_encode(el_val_t s); /* RFC 3986 unreserved set */
el_val_t url_decode(el_val_t s); /* '+' → space, %XX → byte */
/* ── HTML allowlist sanitizer ────────────────────────────────────────────────
* el_html_sanitize(input_html, allowlist_json) strict allowlist HTML
* cleaner. State-machine parser; tag/attribute names compared case-
* insensitively against the allowlist; `<a href>` / `< src>` URL schemes
* validated (http, https, mailto, fragment-only, or relative); whole-
* subtree drop for script / style / iframe / object / embed / form; HTML-
* escapes free text outside dropped subtrees.
*
* The allowlist is JSON of the form
* {"p":[],"a":["href","title"],"strong":[],...}
* where each value is the array of attribute names allowed for that tag. */
el_val_t el_html_sanitize(el_val_t input_html, el_val_t allowlist_json);
/* ── Filesystem ──────────────────────────────────────────────────────────── */
el_val_t fs_read(el_val_t path);
el_val_t fs_write(el_val_t path, el_val_t content);
el_val_t fs_list(el_val_t path);
el_val_t fs_exists(el_val_t path);
el_val_t fs_mkdir(el_val_t path); /* mkdir -p, mode 0755 */
/* Length-explicit binary write. `length` is an Int (el_val_t holding the
* byte count). The caller knows the length from context typically because
* `bytes` came from base64_decode (which produces a magic-tagged binary
* buffer with embedded NULs possible) and the caller already tracks the
* decoded length, OR because the bytes came from a fixed-size source
* (sha256_bytes = 32, hmac_sha256_bytes = 32). Bypasses strlen entirely.
*
* Returns 1 on success, 0 on failure (invalid path, can't open, partial
* write, negative length). On partial-write failure, the file is removed
* so callers cannot read back a truncated artefact. */
el_val_t fs_write_bytes(el_val_t path, el_val_t bytes, el_val_t length);
/* ── JSON ────────────────────────────────────────────────────────────────── */
el_val_t json_get(el_val_t json, el_val_t key);
el_val_t json_parse(el_val_t s);
el_val_t json_stringify(el_val_t v);
el_val_t json_get_string(el_val_t json_str, el_val_t key);
el_val_t json_get_int(el_val_t json_str, el_val_t key);
el_val_t json_get_float(el_val_t json_str, el_val_t key);
el_val_t json_get_bool(el_val_t json_str, el_val_t key);
el_val_t json_get_raw(el_val_t json_str, el_val_t key);
el_val_t json_set(el_val_t json_str, el_val_t key, el_val_t value);
el_val_t json_array_len(el_val_t json_str);
el_val_t json_array_get(el_val_t json_str, el_val_t index);
el_val_t json_array_get_string(el_val_t json_str, el_val_t index);
/* ── Time ────────────────────────────────────────────────────────────────── */
el_val_t time_now(void);
el_val_t time_now_utc(void);
el_val_t sleep_secs(el_val_t secs);
el_val_t sleep_ms(el_val_t ms);
el_val_t time_format(el_val_t ts, el_val_t fmt);
el_val_t time_to_parts(el_val_t ts);
el_val_t time_from_parts(el_val_t secs, el_val_t ns, el_val_t tz);
el_val_t time_add(el_val_t ts, el_val_t n, el_val_t unit);
el_val_t time_diff(el_val_t ts1, el_val_t ts2, el_val_t unit);
/* ── Instant + Duration: first-class temporal types ──────────────────────────
* Both types share the el_val_t (int64) slot. Instants are nanoseconds
* since the Unix epoch; Durations are signed nanoseconds. Type discipline
* is enforced at codegen-time: BinOps on names registered as Instant or
* Duration route through the typed wrappers below; mismatches like
* Instant+Instant become #error at the C compiler.
*
* Postfix literals `30.seconds`, `1.hour`, `500.millis`, `30.nanos` are
* recognised by the parser as DurationLit AST nodes and lowered to literal
* int64 nanoseconds at codegen time. The runtime never sees the units. */
el_val_t el_now_instant(void);
el_val_t now(void);
el_val_t unix_seconds(el_val_t n);
el_val_t unix_millis(el_val_t n);
el_val_t instant_from_iso8601(el_val_t s);
el_val_t el_duration_from_nanos(el_val_t ns);
el_val_t duration_seconds(el_val_t n);
el_val_t duration_millis(el_val_t n);
el_val_t duration_nanos(el_val_t n);
el_val_t el_instant_add_dur(el_val_t inst, el_val_t dur);
el_val_t el_instant_sub_dur(el_val_t inst, el_val_t dur);
el_val_t el_instant_diff(el_val_t a, el_val_t b);
el_val_t el_duration_add(el_val_t a, el_val_t b);
el_val_t el_duration_sub(el_val_t a, el_val_t b);
el_val_t el_duration_scale(el_val_t dur, el_val_t scalar);
el_val_t el_duration_div(el_val_t dur, el_val_t scalar);
el_val_t el_instant_lt(el_val_t a, el_val_t b);
el_val_t el_instant_le(el_val_t a, el_val_t b);
el_val_t el_instant_gt(el_val_t a, el_val_t b);
el_val_t el_instant_ge(el_val_t a, el_val_t b);
el_val_t el_instant_eq(el_val_t a, el_val_t b);
el_val_t el_instant_ne(el_val_t a, el_val_t b);
el_val_t el_duration_lt(el_val_t a, el_val_t b);
el_val_t el_duration_le(el_val_t a, el_val_t b);
el_val_t el_duration_gt(el_val_t a, el_val_t b);
el_val_t el_duration_ge(el_val_t a, el_val_t b);
el_val_t el_duration_eq(el_val_t a, el_val_t b);
el_val_t el_duration_ne(el_val_t a, el_val_t b);
el_val_t instant_to_unix_seconds(el_val_t i);
el_val_t instant_to_unix_millis(el_val_t i);
el_val_t instant_to_iso8601(el_val_t i);
el_val_t duration_to_seconds(el_val_t d);
el_val_t duration_to_millis(el_val_t d);
el_val_t duration_to_nanos(el_val_t d);
el_val_t el_sleep_duration(el_val_t dur);
el_val_t unix_timestamp(void);
el_val_t ttl_cache_set(el_val_t key, el_val_t value);
el_val_t ttl_cache_get(el_val_t key, el_val_t max_age);
el_val_t ttl_cache_age(el_val_t key);
/* ── Calendar + CalendarTime + Rhythm + LocalDate/Time/DateTime ─────────────
* Phase 1.5 of the time system. Calendar is pluggable: EarthCalendar (IANA
* zones, Gregorian, DST) is the user-facing default; MarsCalendar,
* CycleCalendar(period), NoCycleCalendar, RelativeCalendar handle non-Earth
* domains.
*
* A Calendar interprets an Instant under a particular cycle convention and
* produces a CalendarTime. CalendarTime carries the underlying Instant and
* a back-pointer to its Calendar; arithmetic and formatting consult the
* Calendar to convert ns since epoch into year/month/day/hour/minute/second
* (or sol/phase, or cycle/phase, depending on kind).
*
* Storage convention: Calendar / CalendarTime / Rhythm / LocalDate /
* LocalDateTime are heap-allocated structs whose pointers are cast into
* el_val_t. A 24-bit magic header at offset 0 lets the runtime identify
* the kind safely. LocalTime is small enough to live in the int64 slot
* directly (nanos since midnight, signed). */
/* Zone — opaque IANA zone or fixed offset, used by EarthCalendar.
* `zone_id` is either an IANA name ("America/New_York", "UTC") or a fixed
* offset string ("+05:30", "-08:00"). The runtime resolves it via tzset()
* on first use of the owning EarthCalendar. */
el_val_t zone(el_val_t id);
el_val_t zone_utc(void);
el_val_t zone_local(void);
el_val_t zone_offset(el_val_t hours, el_val_t minutes);
/* Calendar constructors. Each returns an el_val_t pointer to a heap-
* allocated, magic-tagged Calendar struct. Calendars are interned by
* (kind, zone_id, period_ns, epoch_ns) so identical constructors return
* the same pointer equality is reference equality. */
el_val_t earth_calendar(el_val_t z);
el_val_t earth_calendar_default(void);
el_val_t mars_calendar(void);
el_val_t cycle_calendar(el_val_t period_dur);
el_val_t no_cycle_calendar(void);
el_val_t relative_calendar(el_val_t epoch_inst);
/* CalendarTime constructors and methods. Returns a heap-allocated struct
* whose pointer fits in el_val_t. */
el_val_t now_in(el_val_t cal);
el_val_t in_calendar(el_val_t inst, el_val_t cal);
el_val_t cal_format(el_val_t ct, el_val_t pattern);
el_val_t cal_to_instant(el_val_t ct);
el_val_t cal_cycle_phase(el_val_t ct);
el_val_t cal_in(el_val_t ct, el_val_t cal);
/* LocalDate / LocalTime / LocalDateTime — calendar-agnostic value types.
* LocalTime carries nanoseconds since midnight as a signed int64 directly
* in the el_val_t slot (no allocation). LocalDate / LocalDateTime are
* heap-allocated structs with magic headers. */
el_val_t local_date(el_val_t y, el_val_t m, el_val_t d);
el_val_t local_time(el_val_t h, el_val_t m, el_val_t s, el_val_t ns);
el_val_t local_datetime(el_val_t date, el_val_t time);
el_val_t zoned(el_val_t date, el_val_t time, el_val_t cal);
el_val_t local_date_year(el_val_t ld);
el_val_t local_date_month(el_val_t ld);
el_val_t local_date_day(el_val_t ld);
el_val_t local_time_hour(el_val_t lt);
el_val_t local_time_minute(el_val_t lt);
el_val_t local_time_second(el_val_t lt);
el_val_t local_time_nanos(el_val_t lt);
el_val_t el_local_date_add_dur(el_val_t ld, el_val_t dur);
el_val_t el_local_time_add_dur(el_val_t lt, el_val_t dur);
el_val_t el_local_date_lt(el_val_t a, el_val_t b);
el_val_t el_local_date_eq(el_val_t a, el_val_t b);
/* Rhythm — pluggable recurrence AST. Returns a heap-allocated struct
* pointer in el_val_t; rhythms are immutable so callers may share them. */
el_val_t rhythm_cycle_start(void);
el_val_t rhythm_cycle_phase(el_val_t phase);
el_val_t rhythm_duration(el_val_t d);
el_val_t rhythm_session_start(void);
el_val_t rhythm_event(el_val_t name);
el_val_t rhythm_and(el_val_t a, el_val_t b);
el_val_t rhythm_or(el_val_t a, el_val_t b);
el_val_t rhythm_weekday(el_val_t day);
el_val_t rhythm_weekly_at(el_val_t day, el_val_t hour, el_val_t minute);
el_val_t rhythm_next_after(el_val_t r, el_val_t after, el_val_t cal);
el_val_t rhythm_matches(el_val_t r, el_val_t ct);
/* ── UUID ────────────────────────────────────────────────────────────────── */
el_val_t uuid_new(void);
el_val_t uuid_v4(void);
/* ── Environment ─────────────────────────────────────────────────────────── */
el_val_t env(el_val_t key);
/* ── In-process state K/V ────────────────────────────────────────────────── */
el_val_t state_set(el_val_t key, el_val_t value);
el_val_t state_get(el_val_t key);
el_val_t state_del(el_val_t key);
el_val_t state_keys(void);
/* ── Float formatting ────────────────────────────────────────────────────── */
el_val_t float_to_str(el_val_t f);
el_val_t int_to_float(el_val_t n);
el_val_t float_to_int(el_val_t f);
el_val_t format_float(el_val_t f, el_val_t decimals);
el_val_t decimal_round(el_val_t f, el_val_t decimals);
el_val_t str_to_float(el_val_t s);
/* ── Math (Float-aware) ──────────────────────────────────────────────────── */
el_val_t math_sqrt(el_val_t f);
el_val_t math_log(el_val_t f);
el_val_t math_ln(el_val_t f);
el_val_t math_sin(el_val_t f);
el_val_t math_cos(el_val_t f);
el_val_t math_pi(void);
/* ── String additions ────────────────────────────────────────────────────── */
el_val_t str_index_of(el_val_t s, el_val_t sub);
el_val_t str_split(el_val_t s, el_val_t sep);
el_val_t str_char_at(el_val_t s, el_val_t i);
el_val_t str_char_code(el_val_t s, el_val_t i);
el_val_t str_pad_left(el_val_t s, el_val_t width, el_val_t pad);
el_val_t str_pad_right(el_val_t s, el_val_t width, el_val_t pad);
el_val_t str_format(el_val_t fmt, el_val_t data);
el_val_t str_lower(el_val_t s);
el_val_t str_upper(el_val_t s);
/* ── Text-processing primitives (Phase 1: byte/codepoint, ASCII char classes)
* Phase 2 (filed): Unicode-grapheme awareness, NFC/NFD normalization, regex.
* is_* predicates: empty input returns false; multi-char requires ALL bytes
* to match. ASCII ranges only in Phase 1. */
/* Counting */
el_val_t str_count(el_val_t s, el_val_t sub); /* non-overlapping */
el_val_t str_count_chars(el_val_t s); /* codepoint count */
el_val_t str_count_bytes(el_val_t s); /* alias of str_len */
el_val_t str_count_lines(el_val_t s);
el_val_t str_count_words(el_val_t s);
el_val_t str_count_letters(el_val_t s); /* ASCII [A-Za-z] */
el_val_t str_count_digits(el_val_t s); /* ASCII [0-9] */
/* Find / position */
el_val_t str_index_of_all(el_val_t s, el_val_t sub); /* [Int] of byte offsets */
el_val_t str_last_index_of(el_val_t s, el_val_t sub);
el_val_t str_find_chars(el_val_t s, el_val_t any_of); /* first idx of any ch */
/* Transform */
el_val_t str_repeat(el_val_t s, el_val_t n);
el_val_t str_reverse(el_val_t s); /* by codepoint */
el_val_t str_strip_prefix(el_val_t s, el_val_t prefix);
el_val_t str_strip_suffix(el_val_t s, el_val_t suffix);
el_val_t str_strip_chars(el_val_t s, el_val_t chars);
el_val_t str_lstrip(el_val_t s);
el_val_t str_rstrip(el_val_t s);
/* Char classification (Bool) */
el_val_t is_letter(el_val_t s);
el_val_t is_digit(el_val_t s);
el_val_t is_alphanumeric(el_val_t s);
el_val_t is_whitespace(el_val_t s);
el_val_t is_punctuation(el_val_t s);
el_val_t is_uppercase(el_val_t s);
el_val_t is_lowercase(el_val_t s);
/* Split / join */
el_val_t str_split_lines(el_val_t s);
el_val_t str_split_chars(el_val_t s); /* alias of native_string_chars */
el_val_t str_split_n(el_val_t s, el_val_t sep, el_val_t n);
el_val_t str_join(el_val_t list, el_val_t sep); /* alias of list_join */
/* ── List additions ──────────────────────────────────────────────────────── */
el_val_t list_push(el_val_t list, el_val_t elem);
el_val_t list_push_front(el_val_t list, el_val_t elem);
el_val_t list_join(el_val_t list, el_val_t sep);
el_val_t list_range(el_val_t start, el_val_t end);
/* ── Bool helpers ────────────────────────────────────────────────────────── */
el_val_t bool_to_str(el_val_t b);
/* ── Numeric parsing ─────────────────────────────────────────────────────── */
el_val_t parse_int(el_val_t s, el_val_t default_val);
/* ── Process ─────────────────────────────────────────────────────────────── */
void exit_program(el_val_t code);
el_val_t getpid_now(void);
/* ── CGI identity ─────────────────────────────────────────────────────────────
* Called at the start of main() in CGI programs (those with a `cgi {}` block).
* Records the program's DHARMA identity before any other code executes. */
void el_cgi_init(el_val_t name, el_val_t dharma_id, el_val_t principal,
el_val_t network, el_val_t engram);
/* ── DHARMA network builtins ─────────────────────────────────────────────────
* Available to CGI programs (declared with a `cgi {}` block).
*
* Peers are addressed by `dharma_id` of the form
* "<registry-id>@<transport-url>" e.g. "ntn-genesis@http://localhost:7770"
* If the @<url> portion is omitted, transport defaults to
* "http://localhost:7770" (the local CGI daemon assumption).
*
* Wire protocol (all peers expose):
* POST <url>/dharma/recv { channel, from, content } response body
* POST <url>/dharma/event { type, payload, source, timestamp }
* POST <url>/api/activate { query } list of nodes
*
* Hosting application's responsibility: an El program with a `cgi {}` block
* runs http_serve() with its own request handler; that handler should route
* "/dharma/event" requests by calling el_runtime_dharma_event_arrive() so
* incoming events feed dharma_field() queues. The runtime itself does not
* intercept any /dharma path. */
el_val_t dharma_connect(el_val_t cgi_id);
el_val_t dharma_send(el_val_t channel, el_val_t content);
el_val_t dharma_activate(el_val_t query);
void dharma_emit(el_val_t event_type, el_val_t payload);
el_val_t dharma_field(el_val_t event_type);
void dharma_strengthen(el_val_t cgi_id, el_val_t weight);
el_val_t dharma_relationship(el_val_t cgi_id);
el_val_t dharma_peers(void);
/* Public C API: called by an El program's HTTP handler when a /dharma/event
* request arrives. Pushes onto the per-event-type queue and signals any
* pending dharma_field() blockers. All three arguments must be NUL-terminated
* C strings (or NULL then treated as empty). */
void el_runtime_dharma_event_arrive(const char* event_type,
const char* payload,
const char* source);
/* ── Engram local graph primitives ───────────────────────────────────────────
* Operate on the CGI's local Engram knowledge graph.
* `engram_activate` queries the local graph only; `dharma_activate` is
* network-wide across all connected CGI graphs. */
el_val_t engram_node(el_val_t content, el_val_t node_type, el_val_t salience);
el_val_t engram_node_full(el_val_t content, el_val_t node_type, el_val_t label,
el_val_t salience, el_val_t importance, el_val_t confidence,
el_val_t tier, el_val_t tags);
/* Layered consciousness — see el_runtime.c for the layered architecture
* design notes (search "Layered consciousness architecture"). The five
* canonical layers (safety / core-identity / domain-knowledge / imprint /
* suit) are seeded automatically; engram_add_layer extends the registry
* with imprint or suit overlays at runtime. Nodes default to layer 1
* (core-identity) when created via engram_node / engram_node_full. */
el_val_t engram_node_layered(el_val_t content, el_val_t node_type, el_val_t label,
el_val_t salience, el_val_t certainty, el_val_t confidence,
el_val_t status, el_val_t tags, el_val_t layer_id);
el_val_t engram_add_layer(el_val_t name, el_val_t priority, el_val_t suppressible,
el_val_t transparent, el_val_t injectable);
el_val_t engram_remove_layer(el_val_t layer_id);
el_val_t engram_list_layers(void);
el_val_t engram_get_node(el_val_t id);
void engram_strengthen(el_val_t node_id);
void engram_forget(el_val_t node_id);
el_val_t engram_prune_telemetry(el_val_t older_than_ms);
el_val_t engram_node_count(void);
el_val_t engram_search(el_val_t query, el_val_t limit);
el_val_t engram_scan_nodes(el_val_t limit, el_val_t offset);
void engram_connect(el_val_t from_id, el_val_t to_id, el_val_t weight, el_val_t relation);
el_val_t engram_edge_between(el_val_t from_id, el_val_t to_id);
el_val_t engram_neighbors(el_val_t node_id);
el_val_t engram_neighbors_filtered(el_val_t node_id, el_val_t max_depth, el_val_t direction);
el_val_t engram_edge_count(void);
/* Three-pass activation: background fan-out → working-memory promotion →
* Layer 0 override. See "Three-pass activation" in el_runtime.c. */
el_val_t engram_activate(el_val_t query, el_val_t depth);
el_val_t engram_save(el_val_t path);
el_val_t engram_load(el_val_t path);
/* JSON-string accessors — return pre-serialized JSON so HTTP handlers
* can pass results straight through without round-tripping ElList/ElMap
* through json_stringify. */
el_val_t engram_get_node_json(el_val_t id);
el_val_t engram_get_node_by_label(el_val_t label);
el_val_t engram_search_json(el_val_t query, el_val_t limit);
el_val_t engram_scan_nodes_json(el_val_t limit, el_val_t offset);
el_val_t engram_scan_nodes_by_type_json(el_val_t node_type, el_val_t limit, el_val_t offset);
el_val_t engram_neighbors_json(el_val_t node_id, el_val_t max_depth, el_val_t direction);
el_val_t engram_activate_json(el_val_t query, el_val_t depth);
el_val_t engram_stats_json(void);
el_val_t engram_act_stats_json(void);
el_val_t engram_cosine_sim(el_val_t id_a, el_val_t id_b);
/* Document frequency of a term across node labels — term-specificity signal
* for curiosity seed selection. (2026-08-03 self-review.) */
el_val_t engram_label_df(el_val_t term);
el_val_t engram_embed_backfill(el_val_t count);
el_val_t engram_list_layers_json(void);
/* Working memory introspection — count, mean weight, and top-N snapshot.
* Ported from el-compiler/runtime on 2026-06-30 self-review. */
el_val_t engram_wm_count(void);
el_val_t engram_wm_avg_weight(void);
el_val_t engram_wm_top_json(el_val_t n);
/* Merge-load: add nodes/edges from a snapshot without resetting the store. */
el_val_t engram_load_merge(el_val_t path);
/* engram_compile_layered_json — produce a prompt-ready text block split
* into "[LAYER 0 — STRUCTURAL]" (non-suppressible layers, sacred fire)
* and "[ENGRAM CONTEXT]" (standard suppressible layers). Returns "" if
* no nodes promoted to working memory. */
el_val_t engram_compile_layered_json(el_val_t intent, el_val_t depth);
/* ── LLM (Anthropic API client) ─────────────────────────────────────────────
* All functions call https://api.anthropic.com/v1/messages with the API key
* from env ANTHROPIC_API_KEY. Default model when empty: claude-sonnet-4-5. */
el_val_t llm_call(el_val_t model, el_val_t prompt);
el_val_t llm_call_system(el_val_t model, el_val_t system_prompt, el_val_t user_prompt);
el_val_t llm_call_agentic(el_val_t model, el_val_t system, el_val_t user, el_val_t tools);
el_val_t llm_vision(el_val_t model, el_val_t system, el_val_t prompt, el_val_t image_url_or_b64);
el_val_t llm_models(void);
/* Register a tool handler by name. The handler is looked up via dlsym
* (mirroring http_set_handler), so any El `fn <name>(input)` compiles to
* a global C symbol that this function can locate at runtime.
* Handler signature: `el_val_t handler(el_val_t input_json)` receives
* the tool input as a JSON-string el_val_t and returns a JSON-string
* el_val_t result. Used by llm_call_agentic. */
void llm_register_tool(el_val_t name, el_val_t handler_fn_name);
/* ── args() ─────────────────────────────────────────────────────────────────
* Provides access to command-line arguments passed to the program.
* Populated by el_runtime_init_args() before main() runs. */
el_val_t args(void);
void el_runtime_init_args(int argc, char** argv);
/* ── Crypto primitives ─────────────────────────────────────────────────────
* SHA-256, HMAC-SHA-256, and base64 (standard + URL-safe).
* Self-contained no OpenSSL/libcrypto dependency. The implementations are
* adapted from public-domain reference code (Brad Conte / RFC 4648).
*
* Bytes-returning variants (sha256_bytes, hmac_sha256_bytes) return a string
* value whose contents are raw binary; callers usually feed these into
* base64_encode. Note that el_val_t strings are NUL-terminated by convention,
* so the binary payload may contain embedded NULs pass it directly into
* base64_encode (which uses an explicit length) rather than treating it as
* a printable C string.
*
* The "base64" variants emit/accept RFC 4648 standard alphabet with padding.
* The "base64url" variants use URL-safe alphabet (`-`/`_`) with no padding,
* as used in JWTs. */
el_val_t sha256_hex(el_val_t input);
el_val_t sha256_bytes(el_val_t input);
el_val_t hmac_sha256_hex(el_val_t key, el_val_t message);
el_val_t hmac_sha256_bytes(el_val_t key, el_val_t message);
el_val_t base64_encode(el_val_t input);
el_val_t base64_decode(el_val_t input);
el_val_t base64url_encode(el_val_t input);
el_val_t base64url_decode(el_val_t input);
/* Length-aware variants (internal — exposed for the rare caller that already
* has a known-length binary buffer and doesn't want to round-trip through
* a NUL-terminated el_val_t string). Sha256_bytes and hmac_sha256_bytes feed
* these implicitly. */
el_val_t el_sha256_bytes_n(const unsigned char* data, size_t len);
el_val_t el_base64_encode_n(const unsigned char* data, size_t len, int url_safe);
/* ── Post-quantum primitives (liboqs-backed) ────────────────────────────────
* All inputs/outputs hex-encoded. Algorithm choices:
* Signature: CRYSTALS-Dilithium-3 (NIST level 3, balanced)
* KEM: CRYSTALS-Kyber-768 (NIST level 3)
* Hash: SHA3-256 (Keccak) (PQ-aware protocols favour SHA3 over SHA2)
*
* If liboqs is not linked (detected via __has_include(<oqs/oqs.h>) at compile
* time), the pq_* entry points return a JSON-shaped error string so callers
* fail loudly rather than silently fall back to classical schemes:
* {"error":"liboqs not linked, post-quantum primitives unavailable"}
*
* The hybrid handshake pairs X25519 with Kyber-768 per NIST PQ guidance and
* CNSA 2.0. Combined shared secret is HKDF-SHA256(x25519_ss || kyber_ss).
* Even if Kyber falls, X25519 holds; if X25519 falls under quantum attack,
* Kyber holds. SHA3-256 also remains usable independent of liboqs (the
* Keccak permutation is PQ-OK as a primitive). */
el_val_t pq_keygen_signature(void);
el_val_t pq_sign(el_val_t secret_key_hex, el_val_t message);
el_val_t pq_verify(el_val_t public_key_hex, el_val_t message, el_val_t signature_hex);
el_val_t pq_kem_keygen(void);
el_val_t pq_kem_encaps(el_val_t public_key_hex);
el_val_t pq_kem_decaps(el_val_t secret_key_hex, el_val_t ciphertext_hex);
el_val_t pq_hybrid_keygen(void);
el_val_t pq_hybrid_handshake(el_val_t remote_pub_combined);
el_val_t sha3_256_hex(el_val_t input);
/* ── AEAD: AES-256-GCM (libcrypto-backed) ───────────────────────────────────
* Symmetric authenticated encryption used to wrap envelopes after a KEM
* handshake. Caller MUST supply a 32-byte key (64 hex chars) typically the
* Kyber-768 / hybrid shared_secret, optionally normalized via SHA3-256.
*
* aead_encrypt returns a JSON map {"nonce":"...","ciphertext":"..."} where
* ciphertext is the AES-256-GCM output with the 16-byte auth tag appended.
* Nonce is a fresh 12-byte CSPRNG draw callers never pick the nonce, which
* structurally rules out the GCM nonce-reuse footgun.
*
* aead_decrypt returns the plaintext String, or "" on any failure (including
* auth-tag mismatch). Callers MUST check for "" before trusting the result. */
el_val_t aead_encrypt(el_val_t key_hex, el_val_t plaintext);
el_val_t aead_decrypt(el_val_t key_hex, el_val_t nonce_hex, el_val_t ciphertext_hex);
/* ── Native VM builtin aliases (for compiled El source) ─────────────────────
* These match the El VM's native_* builtins so that El source compiled
* to C can call the same names without modification. */
el_val_t native_list_get(el_val_t list, el_val_t index);
el_val_t native_list_len(el_val_t list);
el_val_t native_list_append(el_val_t list, el_val_t elem);
el_val_t native_list_empty(void);
el_val_t native_list_clone(el_val_t list);
el_val_t native_string_chars(el_val_t s);
el_val_t native_int_to_str(el_val_t n);
/* ── Method-call shorthand aliases ──────────────────────────────────────────
* The El method-call convention `obj.method(args)` compiles to
* `method(obj, args)`. These aliases expose the runtime functions under
* the short names that result from method calls in El source.
*
* Example: `myList.append(x)` `append(myList, x)` (calls this alias)
* `myList.len()` `len(myList)` (calls this alias) */
el_val_t append(el_val_t list, el_val_t elem); /* el_list_append */
el_val_t len(el_val_t list); /* el_list_len */
el_val_t get(el_val_t list, el_val_t index); /* el_list_get */
el_val_t map_get(el_val_t map, el_val_t key); /* el_map_get */
el_val_t map_set(el_val_t map, el_val_t key, el_val_t value); /* el_map_set */
/* ── OTLP/HTTP Observability ─────────────────────────────────────────────── */
/* See bottom of el_runtime.c for the implementation.
* Configured by env vars OTLP_ENDPOINT, OTEL_SERVICE_NAME, OTEL_SERVICE_VERSION.
* No-op when OTLP_ENDPOINT is unset. Drop-on-failure semantics. */
/* ── Subprocess execution ────────────────────────────────────────────────── */
el_val_t exec_command(el_val_t cmd); /* run shell command, return exit code */
el_val_t exec_capture(el_val_t cmd); /* run shell command, capture stdout */
el_val_t exec(el_val_t cmd); /* exec(cmd) → stdout String (30s timeout) */
el_val_t exec_bg(el_val_t cmd); /* exec_bg(cmd) → PID String (non-blocking) */
el_val_t emit_log(el_val_t level, el_val_t msg, el_val_t fields_json);
el_val_t emit_metric(el_val_t name, el_val_t value, el_val_t tags_json);
el_val_t trace_span_start(el_val_t name);
el_val_t trace_span_end(el_val_t span_handle);
el_val_t emit_event(el_val_t name, el_val_t duration_ms);
#ifdef __cplusplus
}
#endif