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bigmerge bacaf3d39c engram: reconcile M8 HNSW vindex (#109) onto current dev, restore 3 fixes the branch predated
El SDK CI - dev / build-and-test (pull_request) Failing after 4m49s
Lands feat/reframe-region-setop (PR #109: native set-based reframe_region,
decorator-as-seam @route port, teacher-summon, and the M8.1 activate-latency
work — lazy-memoized cosq via eg_cosq_at + engram_vindex HNSW-accelerated
seed discovery + vindex_harvest_from_store/vindex_bench oracle) onto dev's
actual current HEAD, plus engram-tiered-storage's still-unique test suite.

RECONCILING #109 WITH engram-tiered-storage (M4-M10 HNSW/geometry/reason/
verify work): not a two-way merge. engram_vindex.c's HNSW core (search_layer/
select_neighbors/prune_links/insert) is BYTE-IDENTICAL between the two
branches; #109's copy is a strict superset (adds vindex_harvest_from_store,
used by vindex_bench.c's brute-force-vs-HNSW oracle). engram_reason.c and
engram_verify.c are also byte-identical. #109's own branch point already
carried engram-tiered-storage's M4-M10 lineage forward, so there was nothing
left to merge into #109 for those files. The one thing engram-tiered-storage
had that #109's tree dropped: its full test suite (test_vindex.c,
test_geometry.c, test_reason.c, test_verify.c, test_m7_traversal.c, the
interoception P0-P5 tests, bufpool/compaction tests, and their run_*.sh
harnesses) — ported over here unchanged.

WHY THIS NEEDED HAND RECONCILIATION, NOT A MECHANICAL MERGE: #109's branch
forked from dev on 2026-08-14 15:40 (before restructure-adjacent history
diverged the file's merge-base for `git merge` — it presented as an add/add
conflict). A straight two-dot diff (dev tip -> PR tip) applied cleanly, but
it silently reverted THREE dev fixes landed on 2026-08-14/15, after the
branch point, that the PR's diff had no way to know about:

  1. qgate rescale (2026-08-14 self-review): PR's lazy eg_cosq_at rewrite of
     the query-aware propagation gate dropped the shift-and-floor rescale
     about ENGRAM_EMBED_S0 (measured: unrelated-pair median 0.562->raw gate
     0.67, i.e. "a small tax, not a gate"). Restored the rescale, wrapped
     around the lazy accessor -- the PR's actual improvement (WHEN cosq[oi]
     is computed) is orthogonal to WHAT it gates on and both are kept.
  2. Eviction cause decomposition (2026-08-14 self-review): dev decomposes
     wm_evicted into evict_floor/evict_cap/evict_bll so WM churn is
     diagnosable (identity: evicted == floor+cap+bll+dup_wm+dup_wm_global).
     PR's tree predates this and dropped all three counters + their JSON
     stats fields. Restored declarations, all 4 direct increment sites, the
     eg_wm_carry_over bll increment, and the act-stats JSON fields --
     alongside (not instead of) the PR's own P4 afferent / API-reshape
     counters already in that same struct/JSON.
  3. Hebbian link-formation selection (2026-08-15 self-review, TODAY): dev
     selects the STRONGEST qualifying candidate for consolidation each call;
     PR's tree predates this and reverted to hash-slot order (arbitrary wrt
     association strength) for edge formation -- the one path that writes
     PERMANENT structure. Restored the strongest-candidate while-loop,
     keeping the PR's own genuine improvement at that site
     (engram_adj_on_edge_added incremental-index append instead of a bare
     adj_dirty=1 full-rebuild flag).

engram/src/server.el's 3-way conflicts (autoconnect_on/ise_offgraph_on env
flags, /api/nodes connected-count in responses) were pure additive: dev's
side was empty, PR's side added the feature. Took PR's side whole.

VERIFIED (nsbx sandbox only, live :8742/:7770 never touched):
  - cc -std=c11 -O2, clean link against the real engram/src/server.el via
    elc, zero errors.
  - vindex_bench (built standalone, read-only harvest) against the real
    production store clone (13,671 embedded nodes, 768-dim nomic-embed-text):
    recall@10 = 1.0000 at ef 64/128/200; HNSW search 0.28-0.79ms/query vs
    2.03ms/query brute-force oracle (2.6x-7.2x). HNSW build itself: 46.5s
    for the full 13,671-node set -- see the flagged risk below.
  - Booted the reconciled binary in an isolated nsbx sandbox (:8905, cloned
    snapshot of the live store, 13,424 nodes / 37,656 edges) and called
    /api/activate for real: first call after boot 41.5s (pays the one-time
    HNSW build inline -- matches the standalone bench), second/third calls
    356ms/605ms, no crash, correct results, act-stats JSON (including the
    restored evict_floor/cap/bll fields) reads correctly.

KNOWN RISK TO FLAG BEFORE ANY LIVE CUTOVER (not fixed here; out of scope for
this dev-only land per instructions not to touch :8742/:7770): eg_vindex_sync
builds the HNSW index synchronously, inline, on the first engram_activate()
call after every process start (or index invalidation). On the real node
count that is a ~46s blocking stall on a single-threaded server -- the first
request after every restart (or its concurrent siblings) waits the full
build. Recommend a background/incremental build (or a bounded per-call build
budget) before this ever reaches the live daemon. See PR description / final
report for the fuller writeup.
2026-08-15 16:46:44 -05:00
will.anderson 1db5694189 Merge pull request 'engram: add /api/nodes/reseed so a node body can be repaired at its own id' (#92) from feat/engram-reseed-route into dev
El SDK CI - dev / build-and-test (push) Failing after 3m58s
2026-08-15 19:59:34 +00:00
will.anderson e34ebd4b3d Merge pull request 'nsbx + cognitive architecture design + engram self-review series' (#113) from feat/neuron-sandbox into dev
El SDK CI - dev / build-and-test (push) Failing after 4m2s
2026-08-15 19:59:07 +00:00
will.anderson 69870ac883 Merge pull request 'fix(codegen): emit the declared cgi identity — it was searched for in a list that cannot contain it' (#89) from fix/cgi-identity-emission-clean into dev
El SDK CI - dev / build-and-test (push) Failing after 3m35s
2026-08-15 19:58:16 +00:00
will.anderson 274765e0aa Merge pull request 'Add native EL afferent organ: ingest (conscious) + transduce (invisible mechanism)' (#98) from worktree-agent-a1bb8ac67d9006e08 into dev
El SDK CI - dev / build-and-test (push) Failing after 3m59s
2026-08-15 19:57:57 +00:00
will.anderson d4a04bb944 Merge pull request 'swarm: native interruptibility for dispatched agent workers' (#107) from worktree-agent-a6177cda24c71d1df into dev
El SDK CI - dev / build-and-test (push) Failing after 3m55s
2026-08-15 19:57:10 +00:00
will.anderson 905c707d68 Merge pull request 'peripheral: own-core, consent-gated I/O organ (mic/camera/speaker)' (#112) from worktree-agent-af50f3458d7754f19 into dev
El SDK CI - dev / build-and-test (push) Failing after 3m42s
2026-08-15 19:55:51 +00:00
will.anderson 56455740e3 Merge pull request 'elp: native audio/image efferent surfaces + projector proof-of-shape' (#111) from worktree-agent-aaf04b0a9714c4070 into dev
El SDK CI - dev / build-and-test (push) Failing after 4m4s
2026-08-15 19:55:38 +00:00
will.anderson 840e54c7ac Merge pull request 'elp: native speech synthesis + voice-imitation faculty' (#110) from worktree-agent-acc02900ef4ade35e into dev
El SDK CI - dev / build-and-test (push) Failing after 4m13s
2026-08-15 19:55:20 +00:00
will.anderson 5c6da24033 Merge pull request 'spec: grounded edge-propagation (task #50) — gated design artifact' (#108) from worktree-agent-a6577c8211c332c5b into dev
El SDK CI - dev / build-and-test (push) Failing after 3m42s
2026-08-15 19:55:02 +00:00
will.anderson 09ae14a970 Merge pull request 'fix: float arithmetic codegen (segfault/garbage) and math_log aliasing' (#104) from worktree-agent-a456e0cf8cd2ee361 into dev
El SDK CI - dev / build-and-test (push) Failing after 3m57s
2026-08-15 19:54:46 +00:00
will.anderson 7b3f8f2ce8 Merge pull request 'sandbox: multi-repo stack worktree composer (el-stack / neuron-stack)' (#101) from worktree-agent-ac2381b0b9615ab20 into dev
El SDK CI - dev / build-and-test (push) Failing after 3m50s
2026-08-15 19:54:29 +00:00
will.anderson 45f64f3fac Merge pull request 'elp: native-EL language faculty — comprehension, propositions, multilingual, translation' (#100) from integration/langfaculty-20260814 into dev
El SDK CI - dev / build-and-test (push) Failing after 4m13s
2026-08-15 19:54:14 +00:00
will.anderson fdf0d6cb64 Merge pull request 'nsbx: one-command dev onboarding (branch + worktree + isolated engram)' (#99) from feat/nsbx-dev-env into dev
El SDK CI - dev / build-and-test (push) Failing after 13m56s
2026-08-15 19:52:35 +00:00
will.anderson c2d8a07c7b transduce: name the invisible mechanism, fix a silent-failure bug, drop a CRUD verb
El SDK CI - dev / build-and-test (pull_request) Failing after 14m6s
ingest and transduce are complements, not synonyms: ingest is the conscious,
deliberate act of pointing at a source (ingest_file/dir/url/llm/stream stay
named exactly that); transduce is the automatic, invisible mechanism inside
it that converts extracted surface content into geometry (renamed
build_prose/build_structured -> transduce_prose/transduce_structured, the
functions that actually turn raw text into a node+edge manifold).

Real bug found and fixed along the way: the final /api/load-merge response
was never checked for an error. A total failure (bad auth, network down,
anything) silently reported nodes_added:0/edges_added:0 — indistinguishable
from a benign 'everything was already known' outcome. Verified live: with a
wrong key, the tool now honestly returns {"error":"load-merge failed:
unauthorized",...} instead of a misleading zero.

Also dropped a CRUD-verb smell: the per-decision println said CREATE (a
database-log verb for something that hasn't actually been written to the
server yet — it's a local, tentative decision pending the batch merge).
Renamed to FORM. The dead-code eg_create_node (defined, never called)
renamed to eg_crystallize_node and annotated honestly as unused, since if
it's ever wired up it represents the real server-confirmed write, unlike
the local FORM guess.

Not yet re-verified end-to-end against a real successful write: the
ingest-test sandbox (nsbx up ingest-test) is itself currently broken —
it prints a green "ready" banner after its own readiness check fails,
and nothing is actually listening. Filed separately; not in scope here.
2026-08-15 14:44:18 -05:00
bigmerge d8d1b89143 Add repo AGENTS.md and two engram design docs (architecture hardening, DB tooling)
El SDK CI - dev / build-and-test (pull_request) Failing after 14m16s
AGENTS.md: root-level guide to the repo — which of the 8 el_runtime.c
copies is the one canonical, authored source (lang/releases/v1.0.0-20260501,
despite the misleading 'releases/' name) vs. lagging forks/build artifacts,
build commands, and session protocol.

engram/spec/architecture-hardening.design.md: terse engineering anchor for
the 2026-08-14 hardening vision (one calculus over the geometry, core +
ephemeral ring, persistence earned by salience, incarnation model) —
indexes the fuller whitepaper + Neuron artifact 2b8078cf rather than
restating them.

engram/spec/engram-db-tooling-design.md: high-level design for engram DB
tooling (geometry-native browse/query/ops surface over the existing
vantage-read/write/relate/supersede API).

Deliberately leaves out of this commit: the uncommitted el_runtime.c/h +
codegen.el float-arithmetic-codegen diff in this worktree, which appears
to overlap with (or supersede) the fix already preserved via PR #104 —
needs manual reconciliation rather than a second competing PR. Also
leaves out lang/.promote-backup-floatfix/ (a local backup snapshot,
confirms that float-fix work is mid-promotion here), assorted .DS_Store
files, engram/dist/engram.* backup binaries, and lang/dist backup
binaries — none of it source.
2026-08-15 14:29:59 -05:00
bigmerge 6f3d692784 Add peripheral — own-core, consent-gated I/O organ
El SDK CI - dev / build-and-test (pull_request) Failing after 14m23s
939-line Swift I/O organ (mic/camera capture, speaker playback via
AVFoundation/CoreAudio), own-core LPC voice synthesis/imitation,
consent-gating, and full-duplex barge-in conversation — closing the
hear -> understand -> speak loop entirely on-device.

.gitignore in this dir already excludes bin/ (build output), out/
(captured media), and .consent.json/.resume.json (local runtime state),
so only src + README + .gitignore are committed here.
2026-08-15 14:28:14 -05:00
bigmerge b7e2c580a8 Add native speech synthesis and voice-imitation faculty
El SDK CI - dev / build-and-test (pull_request) Successful in 6m28s
speech.el: formant/glottal integer DSP synthesis + voice-analyze-by-
imitation. voice-profile.el / voice-ingest.el: voice-profile plumbing.
accent.el: British-RP as an ingested transform-geometry (explicitly marked
provisional/citation-pending by its own comments). organ-read.el:
engram read-through for the speech organ. Includes demo/test drivers and
non-personal reference data (British-RP phonetics/lexicon derived data,
a public-domain LibriVox RP reference recording).

Deliberately excludes elp/data/live/ (raw recorded voice + face-photo
samples of the repo owner) and the will-*.{json,psv} derived voiceprint
files — personal biometric data that shouldn't be committed to a shared
repo without an explicit decision from the owner. Also excludes this
worktree's elp/src/surface-profile.el, which diverges from the copy in
other worktrees (agent-aaf04b0a9714c4070, main) — needs manual
reconciliation before landing, left out here to avoid silently picking a
version.
2026-08-15 14:27:52 -05:00
bigmerge 827257d3a4 Remove __pycache__ .pyc files accidentally included in the projector commit
El SDK CI - dev / build-and-test (pull_request) Successful in 6m28s
2026-08-15 14:27:23 -05:00
bigmerge 4bbfdcceff Add native audio/image efferent surfaces + projector proof-of-shape
audio-surface.el / image-surface.el: own-core additive-synthesis WAV and
raster-PNG renderers (integer-only DSP, since EL has no floats), rendered
from learned engram signatures via a pluggable surface-profile
abstraction (surface-profile.el). audio-demo.el / image-demo.el are
drivers. NOTE: demo files hardcode absolute paths to this worktree's own
directory — will need a path fixup before landing.

elp/projector/ is a Python package the author's own README marks as
"STAGING/PROOF-OF-SHAPE — not the deliverable", superseded by the native
.el surface-profile work above; kept as a validated architecture proof.
Generated output (elp/faculty/{out,sig}, elp/projector/out,
__pycache__) intentionally excluded.
2026-08-15 14:26:59 -05:00
bigmerge 08cbcef5d9 engram: fix lazy-embed index gap (#20) and make activate's cosine scan lazy; extract vindex harvest primitive with a bench/oracle harness
El SDK CI - dev / build-and-test (pull_request) Successful in 6m42s
Adds an O(1) "seen" bitmap so lazily-embedded older nodes get picked up
incrementally instead of only on a full rebuild (embed-gap #20).

Replaces engram_activate's O(N*D) cosine prescan with a lazy-memoized
cosine cache (eg_cosq_at), proven bit-identical to the old path.

Extracts a clean vindex_harvest_from_store primitive (read-only vector
harvest, careful malloc/ownership/error-path handling) reused by both
index-build and the new vindex_bench.c — a read-only proof harness
comparing brute-force vs HNSW recall/latency on both the real store and
synthetic data.

.nsbx-env intentionally excluded — local sandbox config (ports, paths,
dev-only placeholder key), not checked in.
2026-08-15 14:26:16 -05:00
bigmerge 5f3ddb8b8d Add grounded edge-propagation spec (task #50): core algorithm, proof harness, gated integration patches
El SDK CI - dev / build-and-test (pull_request) Failing after 14m31s
LTP/LTD-style belief grounding propagated along graph edges, with
union-find independence-guarded corroboration. Package: core C algorithm
(gep_core.h), a self-contained deterministic proof harness with recorded
output, staged runtime integration, and gated .el patches for the beat
hook and HTTP route.

Per the author's own LEDGER.md: built + proven on a clone, GATED pending
the engine/HNSW cutover — not wired into the live beat or routes.
Preserved here as a spec/reference artifact, not a request to merge into
the live path.
2026-08-15 14:26:06 -05:00
bigmerge 708722b7ff Add native interruptibility for dispatched agent workers
El SDK CI - dev / build-and-test (pull_request) Failing after 14m43s
Cancellation-token control channel checked at every step boundary lets a
coordinator PAUSE/RESUME/REDIRECT/KILL a running worker mid-task instead of
waiting for the whole (possibly wrong) plan to finish. Bounded purviews
mean no half-committed state to unwind on interrupt. Includes a proof
harness (proof.el, run.sh) comparing a broken non-interruptible worker
against the new one under identical kill/redirect/pause timing.

Distinct from the already-preserved swarm-ccr orchestrator (fan-out/
converge dispatch): this is single-worker interruptibility, a
complementary mechanism, not a duplicate.
2026-08-15 14:25:55 -05:00
bigmerge 2f832c8def Fix float arithmetic codegen and math_log aliasing
El SDK CI - dev / build-and-test (pull_request) Failing after 10m8s
Float + previously fell through to string concat (segfault); -, *, /, %
operated on raw IEEE-754 bit patterns as integers (garbage results). Floats
are now tracked via a __float_names typed-binding set (parallel to the
existing int-tracking scheme) and arithmetic is emitted as real C double
ops.

Also fixes math_log, which was wrongly aliased to natural log (duplicating
math_ln) — now uses log10 — and adds the missing <math.h> include. Rebuilt
elc binary included.
2026-08-15 14:24:14 -05:00
bigmerge 710bea174d Add native EL afferent ingest organ
El SDK CI - dev / build-and-test (pull_request) Successful in 6m29s
Source-polymorphic ingest(source) primitive: extracts content faithfully
from a directory/file/url/llm-query/structured-primitive-set/stream,
decomposes it into a discrete multi-node graph manifold (nodes + internal
edges, never a single blob), and merges it into the engram geometry with
dedup (search + exact/cosine match), provenance, grounding-level, and
stewardship-class tagging from the moment of entry.

Pure HTTP client of the engram server (links only el_runtime.c, never
el_seed.c/the engine directly). Tested against a live nsbx sandbox engram
clone (127.0.0.1:8903) with real writes confirmed via /api/stats
(node_count 3201 / edge_count 6601).

Excludes ingest/build/ — local compiler scratch output (binaries, .c
codegen, .err logs), not source.
2026-08-15 14:22:07 -05:00
bigmerge 05e5d3c402 self-review 2026-08-15: consolidate the strongest Hebbian candidate, not the lowest-hash one
The link-formation scan walked candidate slots ascending and stopped at
ENGRAM_HEBB_LINK_PER_CALL (2). Slot index is a hash of the node id pair, so
whenever more than two candidates cleared LINK_MIN in the same call, the two
consolidated were the two with the lowest hash and a stronger association
waited - indefinitely, since the scan restarts from slot 0 every call while
the leader decays at ENGRAM_HEBB_DECAY.

Measured 08-13..08-15: hebb_cand_max peaked at 0.4963, 3.3x LINK_MIN, during
a ~14h stretch of continuous qualification at the 2/call cap.

Same defect the 2026-08-02 review named and fixed for breakthrough weights
(index order is not a cognitive criterion), never carried across to the one
path that writes permanent structure - and there is no pruning path, so
growth is one-way. Selection pressure matters most where the result is
irreversible.

No-op when <=2 candidates qualify; picks the best when more do.
2026-08-15 08:44:37 -05:00
bigmerge 6621a4dbc5 feat(engram): native set-based reframe_region on the cognition engine
Add the universal engram mutation as ONE operation: isolate a region
(cosine + adjacency) -> supersede it as a set (immutable region-tombstone,
originals retained, engram_forget never used) -> insert the new manifold as a
set -> rebind edges by cosine -> one atomic persist. Single-node write and
supersede are the degenerate n=1 case of the same reframe_core path, not a
separate CRUD path. Keystones kn-efeb4a5b / kn-5b606390 are write-protected.
Purely additive: routes POST /api/reframe, /api/write, /api/supersede.

Verified on an isolated clone of the JSON-snapshot engine (set-replace, n=1,
no-regression, keystones, durable reboot); compile-verified clean against the
cognition multi-TU build. NOT deployed — prod :8742 frozen; blue-verify on the
cognition/egm engine required before any cut.
2026-08-15 04:37:35 -05:00
bigmerge 7e4b21c779 Add sandbox: multi-repo stack worktree composer (el-stack / neuron-stack)
El SDK CI - dev / build-and-test (pull_request) Successful in 6m19s
Assembles every constituent repo of a stack into one combined worktree
workspace, laid out at natural relpaths so cross-repo ../foundation/el
imports resolve to the sandbox copy. Sibling of nsbx; pure bash + git
worktree; never touches live :8742/:7770; isolated engram delegated to nsbx.
2026-08-15 00:55:22 -05:00
bigmerge 15f90003c0 teacher-summon: default-off (TEACHER_ENABLE) soul-native wake; byte-inert when unset
+282 lines in engram/src/server.el implementing the flag-gated teacher summon
(consult_teacher backend abstraction, tier autoselect, GGUF fetch/cache). With
TEACHER_ENABLE unset the summon path is byte-inert. Consolidates the proven
api-reshape pieces (geometry-ops d4f401d, boundary auto-emit 0182642) for the
validated cutover.
2026-08-14 21:52:56 -05:00
bigmerge 01826421c4 seam: implement decorated-fn boundary auto-emit; prove on clone
Will waived diff review -> build it for real. Add engram_boundary_beat() to the
runtime (afferent counter++ + engram_chrono_tick + engram_strengthen(self-anchor)
+ dharma_emit) and two act-stats counters (aff_boundary_ops, dharma_emits).
codegen cg_fn injects ONE engram_boundary_beat(op) at the entry of every
@manager/@accessor fn (fn_has_decorator, so it fires under @route @manager too) —
a decorated op self-reports with ZERO hand-written instrumentation. Rebuilt elc
self-host + the cognition engram in the worktree; ran it as the clone daemon on
:8900. Proof (/api/boundary-proof, @manager, empty body, 5x): aff_boundary_ops
0->5, dharma_emits 0->5, self activation_count 1510->1513, chrono stamp advanced.
Brought in feat/cognitive-architecture engram runtime+server for the build.
strengthen = activation bump (not content/edge write) -> identity protection
intact. Live :8742 untouched; no push, no cutover.
2026-08-14 21:20:18 -05:00
bigmerge d4f401de1c reshape: decorator-as-seam — port @route codegen, prove decorate->serve, rewrite surface as decorated El
Ground-truth the three seams (route/telemetry+interoception/bus) with file:line
evidence. Port the tested @route codegen+parser from feat/el-route-decorators
into the worktree elc (decoration synthesizes el_route_dispatch — no hand-written
90-branch handle_request). Rebuild elc self-host; prove decorate->serve end-to-end
(route_proof.el on :8951). Rewrite surface.el as El-native decorated components:
@route + @accessor/@manager, in-process engram_* builtins (not http_get), @manager
ops emit on the real dharma_* bus (same transport as wt/swarm-ccr). Identity
keystones refused in write/relate/supersede. Gate-1 clone recipe (WAL-aside
cold-boot + ENGRAM_WAL=on) proves the FULL op set live on the clone. Boundary
auto-emit (telemetry/interoception/bus) staged as a reviewable cg_fn diff
(SEAM_STAGED.md) — needs the cognition-engram rebuild to verify link. Live :8742
untouched; no push, no cutover.
2026-08-14 21:01:27 -05:00
bigmerge f19040e484 reshape: geometry ops + primitive agentic tools over the one geometry
Collapse ~90 noun-CRUD MCP tools into read/write/relate/supersede (type is a
parameter) plus the live agentic primitives (think/attend/learn/ground/assert)
already in the engram cognition build. Additive: old noun-tools aliased to the
new ops. Vantage-read applies aperture -> a bounded slice, fixing the whole-self
dumps. Signatures grounded in the live cognition binary; validated on an
isolated nsbx clone (parity.sh: 12 proven, 0 failed). Live :8742 untouched.
2026-08-14 20:34:55 -05:00
bigmerge 6660becfdb nsbx: add one-command dev onboarding (branch + worktree + isolated engram)
El SDK CI - dev / build-and-test (pull_request) Successful in 6m30s
Add 'nsbx dev <name>' / 'nsbx dev-down <name>' plus a Makefile so a newcomer
goes from clone to coding on an isolated cloned engram in one command. The
worktree is created on a real named branch at a persistent path (never /tmp,
guarded), and the whole worktree is pinned to the clone via an emitted .nsbx-env
so live :8742 / ~/.neuron/engram is unreachable by accident. Optimizes the El
edit->build->run loop so provisional work is built in El against a throwaway
clone instead of prototyped in Python and re-ported. Additive over the proven
primitives; no live cutover.
2026-08-14 17:24:06 -05:00
bigmerge 112bb2540f Add nsbx — the Neuron Sandbox primitive
Generalise the ad-hoc cog-arch (worktree+build+store-clone+C-tests) and
store-fix (secondary soul + launchctl rails cutover) proto-sandboxes into one
reproducible primitive: run experiments and code changes against the REAL
engram runtime on an isolated snapshot of the live mind, with a gated
promote-to-prod path.

Dev environment as a primitive — any team member gets a private, isolated copy
of the mind (separate port/store/process); prod on :8742/:7770 is untouchable
from a sandbox. Wraps the real binary; never reimplements engram logic.

Lifecycle: create/up (consistent store+WAL+config snapshot; place OR build the
runtime from --source/--branch/--binary; boot on an isolated port) · build ·
run · validate (rails as checks: zero-loss under load+reboot, reboot-prove, RSS
bound, retrieval parity, keystone integrity) · promote (gated rails cutover:
snapshot-first, additive binary swap, bootout→settle-poll→bootstrap, verify,
auto-rollback; never pkill/kickstart -k; dry-run unless approved) · destroy.

Dogfooded: reproduced retrieval-parity 25/25 vs baseline and the cog-arch
correspondence-loop known result (Brier 0.028648->0.000586, reboot-proven) and
real-store reboot-prove at 10994-node scale, all inside a sandbox; prod
untouched.
2026-08-14 15:40:58 -05:00
bigmerge d595b3c57e cognitive architecture design: cognition as one operation over learnable priors
The buildable form of the "one operation" theory (memory bdc8a488). Maps the
theory onto what is already compiled: the five reasoning operators in
engram_reason.c already collapse onto ONE primitive — engram_reason_point_fit —
plus the geo-algebra (combine/subtract/analogy-rotate/distance), and
engram_verify.c is built on the same fit. So the operator-collapse is already
half-written; what is missing is not the primitive.

What is missing, and what this doc specifies:
- think(anchor, prior) -> gradient (a distribution/direction, not a point); each
  named faculty = {point_fit + a prior}, the operation frozen, the prior learned.
- Prior as a first-class stored node (warp + calibration), superseding the
  intrinsic importance/salience scalar with a relational, grounded-for-whom edge.
  Confirmed against the runtime: importance is already a live activation
  computation (el_runtime.c:13013), never trusted as a static field.
- vantage_read(anchor, aperture) — one op, three settings: self / foreign-field /
  veil.
- The reflexive correspondence-loop as the learning engine: move the grounding
  check from offline Python into the geometry, reflexive, reusing the DORMANT
  verifier (engram_verify_grounding has no runtime caller and no El binding today)
  turned inward. grounding = learning = one loop.
- hold/ground/assert kept distinct: the engram holds anything, grounding is an
  edge, the honesty floor is on assertion only; ungrounded content is first-class.
- metastability: keystone core (read-mostly priors) + plastic everything else.

Seven staged milestones, earliest is a real end-to-end slice (induction as
{primitive + grounded prior} with the loop closing on it, reboot-proven on a
snapshot). Build rails stated: offline/secondary, snapshot-first, reboot-prove,
zero-loss, gated launchctl cutover. Design only; no code changed this pass.
2026-08-14 14:42:01 -05:00
bigmerge 23f43bcc21 self-review 2026-08-14: a gate that passes the median stranger at 0.67 is not a gate
Two changes to the activation path, both grounded in measurement on the live
store rather than on the spec.

1. Rescale cosine before the query gate.

   The propagation gate (arXiv:2606.30133, added in an earlier review) fed RAW
   cosine into FLOOR + (1-FLOOR)*c. Raw cosine from nomic-embed is compressed
   into a narrow high band, so that expression is close to a constant.

   Measured, 400 random UNRELATED node pairs on the live store:
     median 0.562, central 98% span [0.381, 0.743]

   So a node with no semantic relation to the query was propagating at
   0.25 + 0.75*0.562 = 0.67. Two thirds strength. The gate was a small tax.

   Fixed by shifting and flooring about ENGRAM_EMBED_S0 -- which is already in
   this file, already 0.45, and already used exactly this way by the Pass-2 WM
   term. The propagation gate simply never used it. Same 400 pairs after:
   median unrelated pair falls to 0.40, top of range preserved (0.85 vs 0.92),
   gate spread widens 0.42 -> 0.60. Only 8.5% reach the floor, so dissimilar
   lexical/structural pathways are damped, never severed. Range is unchanged
   at [0.25, 1.0], and cosq == NULL still degrades to no gating at all.

2. Decompose the WM eviction counter by cause.

   _eg_act_wm_evicted was incremented from six sites with four distinct causes
   and collapsed all of them into one integer. Today's review measured 175,547
   evictions over 13.5h (~216/min against 24 slots) and could not tell healthy
   rotation from cap thrashing from duplicate churn.

   That is this file's most-repeated defect: dup_wm and dup_wm_global exist
   only because the aggregate could not answer "why" during the 08-02 and
   08-06 incidents. Each of those needed a NEW gauge before it was diagnosable.

   evict_floor / evict_cap / evict_bll complete the decomposition, so
     wm_evicted == floor + cap + bll + dup_wm + dup_wm_global
   holds as an identity and each term implies a different correction. Verified
   on an isolated instance: 30 nodes, 24 filled the cap, wm_evicted 6 ==
   evict_cap 6, all other terms 0.

Built and smoke-tested out of tree. The live daemon runs a pinned binary and
was deliberately not restarted -- the store compaction workstream is in flight.
2026-08-14 08:43:11 -05:00
will.anderson 4f49755ebb Merge pull request 'ci: make official engram build store-enabled (publish + link engram_store.{c,h})' (#95) from engram-tiered-storage into dev
El SDK Release / build-and-release (pull_request) Failing after 40s
El SDK CI - stage / build-and-test (push) Failing after 31s
El SDK CI - stage / build-and-test (pull_request) Failing after 34s
El SDK CI - dev / build-and-test (push) Failing after 3m53s
El SDK Release / build-and-release (push) Failing after 12m31s
2026-08-12 20:23:34 +00:00
will.anderson 7aa847e32a Merge origin/dev into engram-tiered-storage
El SDK CI - dev / build-and-test (pull_request) Failing after 10m51s
Resolve 3 conflicts:
- lang/el-compiler/runtime/el_runtime.c: keep deletion (deprecated runtime fork;
  single-source-of-truth is lang/runtime/, enforced by scripts/check-single-runtime.sh).
- lang/releases/v1.0.0-20260501/el_runtime.h: keep deletion (releases/ is a generated
  artifact folder, not a source path; a release is a git tag, not a folder).
- lang/runtime/el_platform_win.h: union of dev's Windows port (#80: setsockopt optval
  wrapper + curl-less libcurl stubs) and our fsync(->_commit) shim needed by engram_store WAL.

Nothing in dev's build consumes the deprecated fork or releases/ folder.
2026-08-12 15:23:02 -05:00
will.anderson ee71423732 ci: publish + link engram_store.{c,h} so official builds are store-enabled
El SDK CI - dev / build-and-test (pull_request) Failing after 13m20s
The live engram now runs the paged store (neuron.egm+WAL), but the SDK
release publishes only el_runtime.{c,h} and the engram build links only
el_runtime.c — so a future official release would silently revert to the
in-memory store. Publish engram_store.{c,h} as SDK release assets and add
them to the engram build's download + cc link so the store transition
cannot regress.
2026-08-12 14:22:25 -05:00
will.anderson bb64a236ed engram tiered storage: engram-service wiring + elc fold-hang fix + prune-store mirror
- Wire paged store into the ENGRAM SERVICE (server.el, the authoritative durable
  owner): boot->engram_store_boot, persist_canonical->engram_store_checkpoint,
  gated by ENGRAM_STORE.
- elc (lang/elc.c + src/parser.el + codegen.el + elc-combined.el): OOB guard in
  tok_kind/tok_value + parse_block progress backstop — fixes the pre-existing
  unbounded-memory fold hang on sessions.el.
- engram_prune_telemetry mirrors ISE prune to the store (store_forget) so store
  live-count tracks resident and stale telemetry stays bounded.
- Deployed live 2026-08-12: engram :8742 on neuron.egm+WAL, count reconciled 11552.
2026-08-12 14:14:20 -05:00
will.anderson 9a0266cbf9 engram tiered storage M3.5: persist activation field updates (pre-flip gate)
Flag-on checkpoint now full-walks the resident graph: store_put_node (WM weight,
activation_count, last_activated, wm_anchor) + store_put_edge (hebb, last_fired)
for every node/edge, then engram_checkpoint. Uses store_put_edge (idempotent
upsert) not store_hebb_batch, because activation FORMS new hebbian-associate edges
that bypass the create hook and delta-only hebb_batch can't create them. Store-on
boot now applies the same WM-halving + floor + cap transforms as engram_load.

This is the hebb-survives-restart fix. Gate: reboot from neuron.egm with
snapshot.json deleted -> edge hebb + activation_count survive unchanged, WM weight
survives with identical boot transform; negative control proves persist is
load-bearing (hebb->0 without it). M1 33/33 + M2 36/36 + M3 parity PASS, ASan/UBSan
clean, flag-off untouched. Engine unchanged (boundary held).
2026-08-11 23:37:52 -05:00
will.anderson a72145b44e engram tiered storage M3: wire store behind ENGRAM_STORE (default off) + .egm rename
Caller-side shim in el_runtime.c maps EngramNode/Edge <-> StoreNode/Edge; engine
keeps zero soul deps (libengram boundary, design §10). Flag off = today's JSON
path byte-for-byte (proven: no neuron.egm created, graph identical). Flag on =
engram_open (import snapshot.json once into neuron.egm, else WAL-replay) +
resident load; node/edge create + forget dual-write via guarded hooks. Files
renamed engram.store->neuron.egm, engram.wal->neuron.wal.

Gate: M3 parity PASS (graph on==off byte-exact modulo ordering; snapshot round-trip;
reboot-from-egm with snapshot.json deleted; activation set+sequence identical;
ASan/UBSan clean). M1 33/33 + M2 36/36 green post-rename.

Known gap (pre-flip): in-place hebb/WM/activation_count updates during activation
are not yet persisted to the store (create/connect/forget are). Must close before
live flip so learned edges survive restart.
2026-08-11 23:21:21 -05:00
will.anderson 8affb1d6e0 engram tiered storage M2: WAL + checkpoint + crash recovery + legacy import
Write-back no-steal buffer pool makes the fsync'd WAL load-bearing (M1 was
write-through). Logical WAL with record-granularity page-LSN redo idempotency.
Checkpoint = flush dirty pages, fsync store, advance last_checkpoint_lsn,
reclaim WAL prefix. One-time snapshot.json import only when store absent;
JSON never read as the ongoing store thereafter.

Gates: 33/33 M1 (no regression) + 36/36 M2 — replay parity, torn-tail fuzz
(every byte offset), checkpoint-crash at all 5 phases, torn-page+WAL redo,
legacy-import parity, hebb-survives-crash.
2026-08-11 23:00:20 -05:00
will.anderson fa47b98d18 engram tiered storage M1: on-disk paged store format + round-trip tests
Self-contained paged store (lang/runtime/engram_store.{c,h}): 16KiB slotted pages,
u32 TLV self-describing records (forward-compatible), overflow chains, B+-tree
id-index + from/to adjacency, page free-list, tombstones, double superblock + crc
recovery. Not yet wired to activation (M3). 33/33 tests pass (ASan/UBSan clean);
5k nodes/20k edges round-trip bit-exact incl 768xf32 emb + hebb; store 25MB vs 64MB
JSON. Format is final — see design §2.4.
2026-08-11 22:26:05 -05:00
will.anderson 0a72fced28 engram: WAL persistence + integrity hardening + single canonical runtime
El SDK CI - dev / build-and-test (pull_request) Failing after 13m17s
Establish lang/runtime/ as the ONE canonical el runtime (from the active
runtime that carries hebb/emb persistence + the new WAL); repoint the el CI
publish, engram build, elb default, and in-repo build scripts to it; delete
the el-compiler/runtime + lang/releases/ forks; add scripts/check-single-runtime.sh
drift guard.

Fixes a live prod bug: the el CI published el-runtime-c/-h from the LAGGING
el-compiler fork (0 hebb refs), so the shipped soul never persisted Hebbian
edge weights — learned co-activation was wiped on every restart. Publishing
from canonical ships the stranded 'learning that cannot outlive the process'
fix.

WAL storage engine + integrity fixes (DELETE->tombstone + store-layer
protection, safe data-dir default) ride in behind ENGRAM_WAL (default off =
byte-identical to today). Verified: engram elb per-module build clean, WAL
gate 66/66, native smoke ok, drift-guard green.
2026-08-11 21:31:37 -05:00
will.anderson edcec3bdf4 engram: add /api/nodes/reseed so a node body can be repaired at its own id
El SDK Release / build-and-release (pull_request) Failing after 11m24s
Two write paths could put a node in the graph and neither could put a body
on an id that already exists. POST /api/nodes mints a fresh id via
engram_node_full; POST /api/load-merge honors a declared id but skips
anything already present. That is right for the additive case and leaves a
hole: a node resident with a truncated body cannot be repaired.

Forge's genesis seed sits in that hole. Two of Neuron's identity nodes
carry only their own label as content -- 30 and 22 bytes against 4263 and
2590 declared. Their ids are load-bearing (is_protected_node keys on them
and 214 declared edges reference them), so recreating them under a new id
is not a repair, it is a second break.

Engram has no in-place node update, so a replace is forget-then-merge, and
engram_forget also drops every incident edge -- 85 and 93 on those two
nodes, nearly all tag edges and accumulated hebbian associations the seed
does not declare and could not restore. preserve_edges (default true)
therefore snapshots before the forget and re-merges after: the replaced
node is back by then so it is skipped, and every dropped edge returns
through the (from_id,to_id,relation) dedup. The same re-merge is the
failure path -- if the seed merge does not produce the node, the backup
puts the original back. Rollback, not data loss.

With no replace list the route is exactly /api/load-merge.

Verified on a sandbox engram seeded to mirror the live graph's state for
this seed (15 resident nodes, 694 incident edges): 87 nodes created at
their declared ids, 2 replaced in place, 214/214 edges laid, 682/682
non-seed incident edges preserved, and a second run reports 0 added.
2026-08-10 16:44:17 -05:00
Neuron 866c75e5e2 fix(codegen): emit the declared cgi identity — it was searched for in a list that cannot contain it
El SDK Release / build-and-release (pull_request) Failing after 13m58s
El SDK CI - dev / build-and-test (pull_request) Failing after 10m32s
A cgi block is a top-level declaration, so codegen_streaming classifies it via
is_top_level_decl and releases it. The identity emission then searched
toplevel_exec_stmts for that same block. Declarations are excluded from that list by
construction, so the search could never succeed. A probe printed what it actually
saw for a program whose first statement is a cgi block: [Let, Expr]. It emitted
nothing, silently, with no diagnostic on any channel.

The code documented its own assumption — 'Since cgi blocks are rare and small, they
end up in toplevel_exec_stmts' — and that assumption was false.

Capture the declared values before the release and emit from them. The search is
deleted rather than repaired, so the failure mode is removed rather than relocated.

Proven discriminating (old fails, new passes):
  minimal cgi program, old   -> 0 el_cgi_init
  minimal cgi program, fixed -> el_cgi_init with all four declared values
  neuron soul, fixed         -> principal present in the compiled binary (0 before),
                                boots in 2s, interface 110 routes in / 110 out

Consequence: a binary now carries its declared identity as a compiled constant,
which is what the identity protocol requires. Whether the runtime surfaces it to
state_get("soul_principal") is unverified and separate.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>
2026-08-09 13:48:27 -05:00
will.anderson 5d0d4555ae Sync main into dev (GitOps: keep dev current; main authoritative) (#84)
El SDK CI - dev / build-and-test (push) Successful in 8m32s
2026-08-03 15:38:40 +00:00
will.anderson 8347a2f1c0 Merge pull request 'docs: add root README mapping the El monorepo' (#83) from feat/AddingReadme into dev
El SDK CI - dev / build-and-test (push) Successful in 8m22s
2026-07-31 04:25:44 +00:00
Andre Botelho Rodrigues Almeida b97b644799 Addind readme.md file to start documenting the repo
El SDK CI - dev / build-and-test (pull_request) Successful in 8m18s
2026-07-23 16:41:51 -03:00
will.anderson d71fc4c1c0 Merge pull request 'promote stage -> main: reconciled el runtime (engram search + natives + durable truncation fix + Windows port)' (#82) from stage into main
El SDK Release / build-and-release (push) Successful in 8m31s
El SDK CI - dev / build-and-test (pull_request) Successful in 8m41s
2026-07-22 21:44:01 +00:00
will.anderson a118d19393 Merge pull request 'promote dev -> stage: el cluster (#66 engram + #79 truncation fix + release-runtime Windows port)' (#81) from dev into stage
El SDK CI - stage / build-and-test (push) Successful in 7m58s
El SDK Release / build-and-release (pull_request) Successful in 4m16s
2026-07-22 21:20:17 +00:00
will.anderson c6aa1e5c53 Merge pull request 'Land el cluster: #66 engram search + natives, #79 truncation fix, + release-runtime Windows port (reconciled)' (#80) from reconcile/el-cluster-windows-runtime into dev
El SDK CI - dev / build-and-test (push) Successful in 8m3s
El SDK CI - stage / build-and-test (pull_request) Successful in 4m25s
Land el cluster (#66 + #79 + release-runtime Windows-port reconciliation) into dev
2026-07-22 21:06:36 +00:00
will.anderson ff577391f2 reconcile(release-runtime): Windows-port + complete v1.0.0 release runtime so the desktop soul cross-compiles
El SDK CI - dev / build-and-test (pull_request) Successful in 7m7s
The desktop soul (neuron/dist) compiles against the v1.0.0-20260501 release
runtime. After #66 landed the engram natives (tokenized/ranked search,
engram_prune_telemetry) and #79 the durable truncation fix into this runtime,
two gaps remained before it could cross-compile the Windows brain:

1. Windows OS boundary: the release runtime had no Win32 path. Ported the same
   _WIN32-guarded shim the mainline runtime carries (#69): #ifdef _WIN32 ->
   el_platform_win.h (winsock/dlsym/popen + WSAStartup ctor), SOCKET fd guards
   and el_closesocket() at every socket site, CreateProcessA for exec_bg, the
   tm_zone/mingw guard, an el_setsockopt optval wrapper (GCC14), and curl-less
   libcurl stubs. Every change is _WIN32/HAVE_CURL-gated — the POSIX build is
   byte-identical (gcc -fsyntax-only clean; native behaviour unchanged).

2. Header exports: the release el_runtime.h omitted symbols the soul dist calls
   that are defined in this runtime's .c — the http_handler_fn/http_handler4_fn
   typedefs and el_arena_push/pop, engram_prune_telemetry, engram_get_node_by_label.
   Declaration-only, POSIX-neutral; fixes implicit-declaration/unknown-type
   errors under the C11 mingw build.

Result: x86_64-w64-mingw32-gcc compiles el_runtime.c + all 48 soul modules
clean; POSIX gcc -fsyntax-only clean. This is the Windows-port PR the runtime
needed on main (the release-runtime counterpart to #69), landed via stage.
2026-07-22 15:56:08 -05:00
will.anderson ee0d5f9b97 Merge #79: durable HTTP response-truncation fix, both runtimes (via stage) 2026-07-22 15:46:02 -05:00
will.anderson 391bd818ea Merge #66: tokenized+ranked engram lexical search + engram natives (via stage) 2026-07-22 15:45:54 -05:00
will.anderson 43636aed99 runtime: pair fs_read length hint with its buffer in BOTH runtimes — kill response truncation for good
El SDK Release / build-and-release (pull_request) Failing after 7s
The binary-safe fs_read length (_tl_fs_read_len) was consumed by the HTTP
response path for ANY body, even when a handler wrapped a smaller file into a
larger reply. Content-Length then lied AND the send stopped short: the
safety-contact (988) routes returned 178 of 208/218 bytes, cut mid-'set_at' —
unparseable JSON. The desktop app read that as failure. On Windows the shipped
brain is an OLD build without even the per-handler workaround, so EVERY reply
truncated: the app can't read confirmations and refuses the new user.

Durable fix: pair the length hint with the exact buffer pointer it describes
(_tl_fs_read_buf). Apply the raw byte count ONLY when the response IS that
buffer (binary file serving stays correct); every wrapped/enveloped/derived
body is measured with strlen. Reset both at request start and in fs_read /
json_get_raw. This also closes the stale-hint heap over-read (a length larger
than a later body would read past it out the socket) that a plain max() leaves
open — so this class of bug dies on every platform, not just where a handler
happened to be patched.

Applied identically to the mainline runtime (lang/el-compiler/runtime) AND the
frozen release runtime (lang/releases/v1.0.0-20260501) the desktop souls
compile against — the release copy still carried the raw leak, which is why the
Windows brain kept truncating. Same proven approach as PR #78 (Tim Lingo),
extended to cover the release runtime and rebased onto current main.

Both runtimes: gcc -fsyntax-only clean.
2026-07-22 15:04:25 -05:00
will.anderson 2baa0b9a41 Merge pull request 'release: promote stage -> main (ci publish hardening for sdk-release)' (#77) from stage into main
El SDK Release / build-and-release (push) Successful in 7m55s
2026-07-15 21:21:28 +00:00
will.anderson 6a8b2461cd Merge pull request 'release: promote dev -> stage (ci publish hardening for stage/main)' (#76) from dev into stage
El SDK CI - stage / build-and-test (push) Successful in 8m19s
El SDK Release / build-and-release (pull_request) Failing after 13m1s
2026-07-15 21:16:11 +00:00
will.anderson bcb356fe69 Merge pull request 'ci(stage,main): decouple ci-base rebuild, make SDK publish fail loudly' (#75) from hotfix/ci-stage-main-publish-hardening into dev
El SDK CI - stage / build-and-test (pull_request) Successful in 4m27s
El SDK CI - dev / build-and-test (push) Failing after 14m3s
2026-07-15 21:15:27 +00:00
will.anderson dd7827059a ci(stage,main): decouple ci-base rebuild, make SDK publish fail loudly
El SDK CI - dev / build-and-test (pull_request) Failing after 14m30s
Mirror the PR #72 fix (applied to ci-dev.yaml) onto ci-stage.yaml and
sdk-release.yaml. The stage and prod release jobs reported FAILURE even
when the el-runtime-c/-h publish SUCCEEDED, because the ancillary ci-base
Docker rebuild (a CI-cache optimization on the fragile host-mode GCE
runner) reddened the whole job.

- Rebuild ci-base step: continue-on-error: true — never blocks/reddens
  the job; the SDK publish is the deliverable.
- Publish step: set -euo pipefail + empty-key guard + active-account echo
  so a real publish failure still fails loud and is diagnosable.
2026-07-15 16:14:50 -05:00
will.anderson 208e36c899 Merge pull request 'release: promote stage -> main (tokenized search, get_node_by_label, epm fix, win portability)' (#74) from stage into main
El SDK Release / build-and-release (push) Successful in 8m23s
2026-07-15 18:24:39 +00:00
will.anderson b97ce74d1f Merge pull request 'release: promote dev -> stage (tokenized search, get_node_by_label, epm fix)' (#73) from dev into stage
El SDK CI - stage / build-and-test (push) Failing after 8m45s
El SDK Release / build-and-release (pull_request) Successful in 4m1s
2026-07-15 17:20:11 +00:00
will.anderson 155a449c4e Merge pull request 'ci(dev): make SDK publish fail loudly, decouple ci-base rebuild' (#72) from hotfix/ci-dev-publish-hardening into dev
El SDK CI - dev / build-and-test (push) Successful in 8m56s
El SDK CI - stage / build-and-test (pull_request) Successful in 4m10s
2026-07-15 16:34:14 +00:00
will.anderson 4696fd6833 ci(dev): make SDK publish fail loudly, decouple ci-base rebuild
El SDK CI - dev / build-and-test (pull_request) Successful in 8m51s
The dev push build went green-then-red while nothing published: the
Publish step had no set -e, so an auth/upload failure exited 0 (silent
no-publish), while the ci-base rebuild (set -euo pipefail + Docker on the
host-mode runner) hard-failed the job. Add set -euo pipefail + an empty-key
guard + active-account echo to the Publish step so failures surface with a
retrievable log, and mark the ci-base cache rebuild continue-on-error so
the fragile Docker step can never block the actual SDK artifact publish.
2026-07-15 11:33:37 -05:00
will.anderson 581a351fb1 Merge pull request 'integrate: stack PRs #65–#69 (elc OOM guard, tokenized+semantic engram search, get_node_by_label, win portability) for green CI' (#71) from hotfix/stage-elc-engram-integration into dev
El SDK CI - dev / build-and-test (push) Failing after 14m31s
2026-07-15 15:49:57 +00:00
will.anderson 8ce8656de2 epm: declare cross-module callees as extern fn so strict compilers accept generated C
El SDK CI - dev / build-and-test (pull_request) Successful in 7m33s
epm's sibling modules (registry/install/update) call functions defined in other
modules and in the El runtime (config, read_installed, registry_find,
manifest_deps, manifest_name, registry_latest_version, registry_token,
install_vessel, installed_version) without importing them, so elc emits no C
prototype for those calls. gcc<=13 treated the resulting implicit declarations
as warnings; gcc>=14 and clang reject them as hard errors, which is why the
"Build epm" CI step fails and blocks the whole dev/stage pipeline.

Add `extern fn` forward declarations -- El's own separate-compilation mechanism
-- for each cross-module callee at the top of registry/install/update. This
gives elc the correct C prototype in every generated translation unit, so the
calls compile cleanly and still resolve at link time. Simply suppressing
-Wimplicit-function-declaration would be unsafe: an implicit int return
truncates the 64-bit pointer returns of config/registry_find into a latent
crash, so declaring the true signatures is the correct fix. Localized to epm;
touches neither elc nor the runtime.
2026-07-15 10:14:43 -05:00
will.anderson 1e49560f1f Merge remote-tracking branch 'origin/feat/engram-semantic-search' into hotfix/stage-elc-engram-integration
El SDK CI - dev / build-and-test (pull_request) Failing after 14m39s
# Conflicts:
#	lang/el-compiler/runtime/el_runtime.c
2026-07-15 09:33:05 -05:00
will.anderson e8f0b5a9de Merge remote-tracking branch 'origin/fix/engram-lexical-tokenized-search' into hotfix/stage-elc-engram-integration 2026-07-15 09:28:44 -05:00
will.anderson 40287c4cfc Merge remote-tracking branch 'origin/hotfix/win-runtime-portability' into hotfix/stage-elc-engram-integration 2026-07-15 09:28:44 -05:00
will.anderson 0481bea44d Merge remote-tracking branch 'origin/hotfix/runtime-engram-get-node-by-label' into hotfix/stage-elc-engram-integration 2026-07-15 09:28:44 -05:00
will.anderson 9d565ca080 Merge remote-tracking branch 'origin/hotfix/elc-fixes' into hotfix/stage-elc-engram-integration 2026-07-15 09:28:44 -05:00
will.anderson 4773dd0aa2 runtime: make Windows soul reproducible from a clean el checkout
El SDK Release / build-and-release (pull_request) Failing after 16s
Two el_runtime portability defects only ever lived in staged local copies
used to hand-build neuron-ui PR #136's curl-enabled Windows neuron.exe.
gcc 15 promotes both to hard errors, so a clean el checkout cannot rebuild
that soul. Upstream the minimal fixes so the build is reproducible:

- http_serve_async: cast setsockopt optval to (const char*). Win32/mingw
  setsockopt wants const char*, not int*; the cast is a no-op on POSIX and
  matches the four already-cast sites elsewhere in this file.
- engram_save persist path: map fsync -> _commit in the _WIN32-only
  el_platform_win.h (io.h already included). Windows has no fsync(); the
  POSIX path is untouched.
2026-07-15 04:24:08 -05:00
will.anderson 6b9d9e6c4a Add engram_get_node_by_label runtime native to unblock soul link
El SDK Release / build-and-release (pull_request) Failing after 22s
chat.el calls the runtime native engram_get_node_by_label to fetch
well-known nodes (conv:history, session:summary) by stable label rather
than by ID — immune to vector-index drift across restarts. The current
runtime never defined it, so the regenerated dist/soul.c fails to link.

Backport the function verbatim (idiom-adapted to jb_finish) from release
runtime v1.0.0-20260501 and register it as an EL builtin exactly like its
siblings: runtime definition + prototype, __-prefixed seed wrapper +
prototype, and codegen arity entry. No search-site code is touched.
2026-07-15 04:07:33 -05:00
will.anderson b4967af13e feat(engram): semantic search layer via nomic-embed-text (cosine ∪ lexical)
Lexical istr_contains alone can't surface a node whose words don't appear
in the query. This adds an optional dense-vector layer: node content and the
query are embedded through Ollama (nomic-embed-text), and nodes are ranked by
cosine similarity unioned with lexical hits, so a paraphrase query reaches the
right node.

Wired into all three query entry points in el_runtime.c:
  - engram_search_json (HTTP /api/search): collect lexical ∪ semantic
    candidates, score (lexical base 1.0 + cosine; pure-semantic = cosine),
    rank, emit top-N. Stable sort preserves old order when semantic is off.
  - engram_search (internal el_val twin): lexical ∪ semantic union.
  - engram_activate seed loop (HTTP /api/activate): a node seeds if it
    lexically matches OR clears the cosine threshold; pure-semantic seeds
    enter scaled by cosine so paraphrase spreads without overpowering.

Degradable by design: the whole layer is gated on HAVE_CURL plus a one-shot
runtime probe. If curl is compiled out, Ollama is unreachable, or
ENGRAM_SEMANTIC=0, every entry point yields zero semantic signal and callers
fall back byte-for-byte to the pre-existing lexical search.

Node embeddings are cached in process memory keyed by node id with an FNV-1a
content hash for invalidation; the query is embedded once per call — so the
graph is not re-embedded on every query. nomic task prefixes
(search_query:/search_document:) are applied for retrieval separation.

Build steps gain -DHAVE_CURL so the engram artifact compiles the layer in
(-lcurl was already linked). Env: ENGRAM_SEMANTIC, ENGRAM_EMBED_URL,
ENGRAM_EMBED_MODEL, ENGRAM_SEMANTIC_MIN (cosine threshold, default 0.6).
2026-07-14 18:48:16 -05:00
will.anderson 2b2a1246e7 Merge pull request 'runtime: fix the memory-leak + write-corruption pair in el_runtime.c' (#64) from hotfix/el-runtime-leak-and-persist into main
El SDK Release / build-and-release (push) Failing after 10m52s
2026-07-13 21:23:31 +00:00
will.anderson 5c41c66a0f Merge pull request 'fix(windows): guard el_mem_check with _WIN32 — rusage is POSIX-only' (#60) from fix/windows-rusage-guard into stage
El SDK CI - stage / build-and-test (push) Failing after 13m21s
fix(windows): guard el_mem_check with _WIN32 — rusage is POSIX-only
2026-06-25 16:48:13 +00:00
188 changed files with 31052 additions and 24613 deletions
+37 -22
View File
@@ -39,9 +39,9 @@ jobs:
run: |
dist/platform/elc-linux-amd64 elc-cli.el > dist/elc-gen2.c
gcc -O2 \
-I el-compiler/runtime \
-I runtime \
dist/elc-gen2.c \
el-compiler/runtime/el_runtime.c \
runtime/el_runtime.c \
-lcurl -lssl -lcrypto -lpthread -lm \
-o dist/platform/elc
chmod +x dist/platform/elc
@@ -54,9 +54,9 @@ jobs:
mkdir -p dist/bin
dist/platform/elc elb.el > dist/elb.c
gcc -O2 \
-I el-compiler/runtime \
-I runtime \
dist/elb.c \
el-compiler/runtime/el_runtime.c \
runtime/el_runtime.c \
-lcurl -lssl -lcrypto -lpthread -lm \
-o dist/bin/elb
chmod +x dist/bin/elb
@@ -91,7 +91,7 @@ jobs:
- name: Precompile el_runtime.o
run: |
set -euo pipefail
RUNTIME="$(pwd)/el-compiler/runtime"
RUNTIME="$(pwd)/runtime"
gcc -O2 -c -I "$RUNTIME" "$RUNTIME/el_runtime.c" \
-o /tmp/el_runtime.o
echo "el_runtime.o compiled"
@@ -100,7 +100,7 @@ jobs:
run: |
set -euo pipefail
ELC="$(pwd)/dist/platform/elc"
RUNTIME="$(pwd)/el-compiler/runtime"
RUNTIME="$(pwd)/runtime"
"$ELC" --test tests/native/test_core.el > /tmp/el_native_core.c
gcc -O2 -I "$RUNTIME" /tmp/el_native_core.c /tmp/el_runtime.o \
-lcurl -lssl -lcrypto -lpthread -lm -o /tmp/el_native_core
@@ -110,7 +110,7 @@ jobs:
run: |
set -euo pipefail
ELC="$(pwd)/dist/platform/elc"
RUNTIME="$(pwd)/el-compiler/runtime"
RUNTIME="$(pwd)/runtime"
"$ELC" --test tests/native/test_text.el > /tmp/el_native_text.c
gcc -O2 -I "$RUNTIME" /tmp/el_native_text.c /tmp/el_runtime.o \
-lcurl -lssl -lcrypto -lpthread -lm -o /tmp/el_native_text
@@ -120,7 +120,7 @@ jobs:
run: |
set -euo pipefail
ELC="$(pwd)/dist/platform/elc"
RUNTIME="$(pwd)/el-compiler/runtime"
RUNTIME="$(pwd)/runtime"
"$ELC" --test tests/native/test_string.el > /tmp/el_native_string.c
gcc -O2 -I "$RUNTIME" /tmp/el_native_string.c /tmp/el_runtime.o \
-lcurl -lssl -lcrypto -lpthread -lm -o /tmp/el_native_string
@@ -130,7 +130,7 @@ jobs:
run: |
set -euo pipefail
ELC="$(pwd)/dist/platform/elc"
RUNTIME="$(pwd)/el-compiler/runtime"
RUNTIME="$(pwd)/runtime"
"$ELC" --test tests/native/test_math.el > /tmp/el_native_math.c
gcc -O2 -I "$RUNTIME" /tmp/el_native_math.c /tmp/el_runtime.o \
-lcurl -lssl -lcrypto -lpthread -lm -o /tmp/el_native_math
@@ -140,7 +140,7 @@ jobs:
run: |
set -euo pipefail
ELC="$(pwd)/dist/platform/elc"
RUNTIME="$(pwd)/el-compiler/runtime"
RUNTIME="$(pwd)/runtime"
"$ELC" --test tests/native/test_state.el > /tmp/el_native_state.c
gcc -O2 -I "$RUNTIME" /tmp/el_native_state.c /tmp/el_runtime.o \
-lcurl -lssl -lcrypto -lpthread -lm -o /tmp/el_native_state
@@ -150,7 +150,7 @@ jobs:
run: |
set -euo pipefail
ELC="$(pwd)/dist/platform/elc"
RUNTIME="$(pwd)/el-compiler/runtime"
RUNTIME="$(pwd)/runtime"
"$ELC" --test tests/native/test_time.el > /tmp/el_native_time.c
gcc -O2 -I "$RUNTIME" /tmp/el_native_time.c /tmp/el_runtime.o \
-lcurl -lssl -lcrypto -lpthread -lm -o /tmp/el_native_time
@@ -160,7 +160,7 @@ jobs:
run: |
set -euo pipefail
ELC="$(pwd)/dist/platform/elc"
RUNTIME="$(pwd)/el-compiler/runtime"
RUNTIME="$(pwd)/runtime"
"$ELC" --test tests/native/test_json.el > /tmp/el_native_json.c
gcc -O2 -I "$RUNTIME" /tmp/el_native_json.c /tmp/el_runtime.o \
-lcurl -lssl -lcrypto -lpthread -lm -o /tmp/el_native_json
@@ -170,7 +170,7 @@ jobs:
run: |
set -euo pipefail
ELC="$(pwd)/dist/platform/elc"
RUNTIME="$(pwd)/el-compiler/runtime"
RUNTIME="$(pwd)/runtime"
"$ELC" --test tests/native/test_env.el > /tmp/el_native_env.c
gcc -O2 -I "$RUNTIME" /tmp/el_native_env.c /tmp/el_runtime.o \
-lcurl -lssl -lcrypto -lpthread -lm -o /tmp/el_native_env
@@ -180,7 +180,7 @@ jobs:
run: |
set -euo pipefail
ELC="$(pwd)/dist/platform/elc"
RUNTIME="$(pwd)/el-compiler/runtime"
RUNTIME="$(pwd)/runtime"
"$ELC" --test tests/native/test_fs.el > /tmp/el_native_fs.c
gcc -O2 -I "$RUNTIME" /tmp/el_native_fs.c /tmp/el_runtime.o \
-lcurl -lssl -lcrypto -lpthread -lm -o /tmp/el_native_fs
@@ -191,7 +191,7 @@ jobs:
run: |
ABS_ELB="$(pwd)/dist/bin/elb"
ABS_ELC="$(pwd)/dist/platform/elc"
ABS_RUNTIME="$(pwd)/el-compiler/runtime"
ABS_RUNTIME="$(pwd)/runtime"
ABS_OUT="$(pwd)/dist/bin"
(cd ../epm && "$ABS_ELB" --clean --elc="$ABS_ELC" --runtime="$ABS_RUNTIME" --out="$ABS_OUT")
chmod +x dist/bin/epm
@@ -202,7 +202,7 @@ jobs:
run: |
ABS_ELB="$(pwd)/dist/bin/elb"
ABS_ELC="$(pwd)/dist/platform/elc"
ABS_RUNTIME="$(pwd)/el-compiler/runtime"
ABS_RUNTIME="$(pwd)/runtime"
ABS_OUT="$(pwd)/dist/bin"
(cd tools/install && "$ABS_ELB" --clean --elc="$ABS_ELC" --runtime="$ABS_RUNTIME" --out="$ABS_OUT")
chmod +x dist/bin/el-install
@@ -214,9 +214,18 @@ jobs:
env:
GCP_SA_KEY: ${{ secrets.GCP_SA_KEY }}
run: |
# Fail loudly: previously this step had no `set -e`, so an auth or
# upload failure was swallowed (step exited 0 on the trailing echo)
# and the SDK silently never published. Surface failures now.
set -euo pipefail
if [ -z "${GCP_SA_KEY:-}" ]; then
echo "FATAL: GCP_SA_KEY secret is empty — cannot authenticate to publish" >&2
exit 1
fi
echo "${GCP_SA_KEY}" > /tmp/gcp-key.json
gcloud auth activate-service-account --key-file=/tmp/gcp-key.json
gcloud config set project neuron-785695
echo "Publishing as active account: $(gcloud config get-value account 2>/dev/null)"
VERSION="${GITHUB_SHA:0:8}"
@@ -242,7 +251,7 @@ jobs:
--project=neuron-785695 \
--package=el-runtime-c \
--version="${VERSION}" \
--source=el-compiler/runtime/el_runtime.c
--source=runtime/el_runtime.c
gcloud artifacts generic upload \
--repository=foundation-dev \
@@ -250,7 +259,7 @@ jobs:
--project=neuron-785695 \
--package=el-runtime-h \
--version="${VERSION}" \
--source=el-compiler/runtime/el_runtime.h
--source=runtime/el_runtime.h
gcloud artifacts generic upload \
--repository=foundation-dev \
@@ -258,7 +267,7 @@ jobs:
--project=neuron-785695 \
--package=el-runtime-js \
--version="${VERSION}" \
--source=el-compiler/runtime/el_runtime.js
--source=runtime/el_runtime.js
echo "Published El SDK version=${VERSION} to foundation-dev"
# Keep key alive for the ci-base rebuild step below
@@ -268,6 +277,12 @@ jobs:
# Patches ci-base:dev in-place: pulls the existing image (which has all
# system deps — Node, Go, gcloud, Docker CLI, etc.) and overlays the freshly
# built El SDK on top. Keeps the full ci-base rebuild fast and incremental.
#
# continue-on-error: this is a CI-cache optimization, NOT the release
# artifact. It runs Docker (pull/build/push ~600MB) on the host-mode GCE
# runner where DinD/Docker availability is fragile. A failure here must
# never block or redden the job — the SDK publish above is the deliverable.
continue-on-error: true
if: github.event_name == 'push'
env:
GCP_SA_KEY: ${{ secrets.GCP_SA_KEY }}
@@ -291,9 +306,9 @@ jobs:
FROM ${BASE}
COPY dist/platform/elc /opt/el/dist/platform/elc
COPY dist/bin/elb /opt/el/dist/bin/elb
COPY el-compiler/runtime/el_runtime.c /opt/el/el-compiler/runtime/el_runtime.c
COPY el-compiler/runtime/el_runtime.h /opt/el/el-compiler/runtime/el_runtime.h
COPY el-compiler/runtime/el_runtime.js /opt/el/el-compiler/runtime/el_runtime.js
COPY runtime/el_runtime.c /opt/el/runtime/el_runtime.c
COPY runtime/el_runtime.h /opt/el/runtime/el_runtime.h
COPY runtime/el_runtime.js /opt/el/runtime/el_runtime.js
RUN chmod +x /opt/el/dist/platform/elc /opt/el/dist/bin/elb
EOF
+35 -20
View File
@@ -46,9 +46,9 @@ jobs:
run: |
dist/platform/elc-linux-amd64 elc-cli.el > dist/elc-gen2.c
gcc -O2 \
-I el-compiler/runtime \
-I runtime \
dist/elc-gen2.c \
el-compiler/runtime/el_runtime.c \
runtime/el_runtime.c \
-lcurl -lssl -lcrypto -lpthread -lm \
-o dist/platform/elc
chmod +x dist/platform/elc
@@ -84,7 +84,7 @@ jobs:
run: |
set -euo pipefail
ELC="$(pwd)/dist/platform/elc"
RUNTIME="$(pwd)/el-compiler/runtime"
RUNTIME="$(pwd)/runtime"
"$ELC" --test tests/native/test_core.el > /tmp/el_native_core.c
gcc -O2 -I "$RUNTIME" /tmp/el_native_core.c "$RUNTIME/el_runtime.c" \
-lcurl -lssl -lcrypto -lpthread -lm -o /tmp/el_native_core
@@ -94,7 +94,7 @@ jobs:
run: |
set -euo pipefail
ELC="$(pwd)/dist/platform/elc"
RUNTIME="$(pwd)/el-compiler/runtime"
RUNTIME="$(pwd)/runtime"
"$ELC" --test tests/native/test_text.el > /tmp/el_native_text.c
gcc -O2 -I "$RUNTIME" /tmp/el_native_text.c "$RUNTIME/el_runtime.c" \
-lcurl -lssl -lcrypto -lpthread -lm -o /tmp/el_native_text
@@ -104,7 +104,7 @@ jobs:
run: |
set -euo pipefail
ELC="$(pwd)/dist/platform/elc"
RUNTIME="$(pwd)/el-compiler/runtime"
RUNTIME="$(pwd)/runtime"
"$ELC" --test tests/native/test_string.el > /tmp/el_native_string.c
gcc -O2 -I "$RUNTIME" /tmp/el_native_string.c "$RUNTIME/el_runtime.c" \
-lcurl -lssl -lcrypto -lpthread -lm -o /tmp/el_native_string
@@ -114,7 +114,7 @@ jobs:
run: |
set -euo pipefail
ELC="$(pwd)/dist/platform/elc"
RUNTIME="$(pwd)/el-compiler/runtime"
RUNTIME="$(pwd)/runtime"
"$ELC" --test tests/native/test_math.el > /tmp/el_native_math.c
gcc -O2 -I "$RUNTIME" /tmp/el_native_math.c "$RUNTIME/el_runtime.c" \
-lcurl -lssl -lcrypto -lpthread -lm -o /tmp/el_native_math
@@ -124,7 +124,7 @@ jobs:
run: |
set -euo pipefail
ELC="$(pwd)/dist/platform/elc"
RUNTIME="$(pwd)/el-compiler/runtime"
RUNTIME="$(pwd)/runtime"
"$ELC" --test tests/native/test_state.el > /tmp/el_native_state.c
gcc -O2 -I "$RUNTIME" /tmp/el_native_state.c "$RUNTIME/el_runtime.c" \
-lcurl -lssl -lcrypto -lpthread -lm -o /tmp/el_native_state
@@ -134,7 +134,7 @@ jobs:
run: |
set -euo pipefail
ELC="$(pwd)/dist/platform/elc"
RUNTIME="$(pwd)/el-compiler/runtime"
RUNTIME="$(pwd)/runtime"
"$ELC" --test tests/native/test_time.el > /tmp/el_native_time.c
gcc -O2 -I "$RUNTIME" /tmp/el_native_time.c "$RUNTIME/el_runtime.c" \
-lcurl -lssl -lcrypto -lpthread -lm -o /tmp/el_native_time
@@ -144,7 +144,7 @@ jobs:
run: |
set -euo pipefail
ELC="$(pwd)/dist/platform/elc"
RUNTIME="$(pwd)/el-compiler/runtime"
RUNTIME="$(pwd)/runtime"
"$ELC" --test tests/native/test_json.el > /tmp/el_native_json.c
gcc -O2 -I "$RUNTIME" /tmp/el_native_json.c "$RUNTIME/el_runtime.c" \
-lcurl -lssl -lcrypto -lpthread -lm -o /tmp/el_native_json
@@ -154,7 +154,7 @@ jobs:
run: |
set -euo pipefail
ELC="$(pwd)/dist/platform/elc"
RUNTIME="$(pwd)/el-compiler/runtime"
RUNTIME="$(pwd)/runtime"
"$ELC" --test tests/native/test_env.el > /tmp/el_native_env.c
gcc -O2 -I "$RUNTIME" /tmp/el_native_env.c "$RUNTIME/el_runtime.c" \
-lcurl -lssl -lcrypto -lpthread -lm -o /tmp/el_native_env
@@ -164,7 +164,7 @@ jobs:
run: |
set -euo pipefail
ELC="$(pwd)/dist/platform/elc"
RUNTIME="$(pwd)/el-compiler/runtime"
RUNTIME="$(pwd)/runtime"
"$ELC" --test tests/native/test_fs.el > /tmp/el_native_fs.c
gcc -O2 -I "$RUNTIME" /tmp/el_native_fs.c "$RUNTIME/el_runtime.c" \
-lcurl -lssl -lcrypto -lpthread -lm -o /tmp/el_native_fs
@@ -176,9 +176,9 @@ jobs:
mkdir -p dist/bin
dist/platform/elc elb.el > dist/elb.c
gcc -O2 \
-I el-compiler/runtime \
-I runtime \
dist/elb.c \
el-compiler/runtime/el_runtime.c \
runtime/el_runtime.c \
-lcurl -lssl -lcrypto -lpthread -lm \
-o dist/bin/elb
chmod +x dist/bin/elb
@@ -189,7 +189,7 @@ jobs:
run: |
ABS_ELB="$(pwd)/dist/bin/elb"
ABS_ELC="$(pwd)/dist/platform/elc"
ABS_RUNTIME="$(pwd)/el-compiler/runtime"
ABS_RUNTIME="$(pwd)/runtime"
ABS_OUT="$(pwd)/dist/bin"
(cd ../epm && "$ABS_ELB" --clean --elc="$ABS_ELC" --runtime="$ABS_RUNTIME" --out="$ABS_OUT")
chmod +x dist/bin/epm
@@ -200,7 +200,7 @@ jobs:
run: |
ABS_ELB="$(pwd)/dist/bin/elb"
ABS_ELC="$(pwd)/dist/platform/elc"
ABS_RUNTIME="$(pwd)/el-compiler/runtime"
ABS_RUNTIME="$(pwd)/runtime"
ABS_OUT="$(pwd)/dist/bin"
(cd tools/install && "$ABS_ELB" --clean --elc="$ABS_ELC" --runtime="$ABS_RUNTIME" --out="$ABS_OUT")
chmod +x dist/bin/el-install
@@ -212,12 +212,21 @@ jobs:
env:
GCP_SA_KEY: ${{ secrets.GCP_SA_KEY }}
run: |
# Fail loudly: previously this step had no `set -e`, so an auth or
# upload failure was swallowed (step exited 0 on the trailing echo)
# and the SDK silently never published. Surface failures now.
set -euo pipefail
if [ -z "${GCP_SA_KEY:-}" ]; then
echo "FATAL: GCP_SA_KEY secret is empty — cannot authenticate to publish" >&2
exit 1
fi
echo "${GCP_SA_KEY}" > /tmp/gcp-key.json
apt-get install -y -qq apt-transport-https ca-certificates curl
echo "deb [trusted=yes] https://packages.cloud.google.com/apt cloud-sdk main" > /etc/apt/sources.list.d/google-cloud-sdk.list
apt-get update -qq && apt-get install -y google-cloud-cli
gcloud auth activate-service-account --key-file=/tmp/gcp-key.json
gcloud config set project neuron-785695
echo "Publishing as active account: $(gcloud config get-value account 2>/dev/null)"
VERSION="${GITHUB_SHA:0:8}"
@@ -235,7 +244,7 @@ jobs:
--project=neuron-785695 \
--package=el-runtime-c \
--version="${VERSION}" \
--source=el-compiler/runtime/el_runtime.c
--source=runtime/el_runtime.c
gcloud artifacts generic upload \
--repository=foundation-stage \
@@ -243,7 +252,7 @@ jobs:
--project=neuron-785695 \
--package=el-runtime-h \
--version="${VERSION}" \
--source=el-compiler/runtime/el_runtime.h
--source=runtime/el_runtime.h
echo "Published El SDK version=${VERSION} to foundation-stage"
# Keep key alive for the ci-base rebuild step below
@@ -253,6 +262,12 @@ jobs:
# Patches ci-base:stage in-place: pulls the existing image (which has all
# system deps — Node, Go, gcloud, Docker CLI, etc.) and overlays the freshly
# built El SDK on top. Keeps the full ci-base rebuild fast and incremental.
#
# continue-on-error: this is a CI-cache optimization, NOT the release
# artifact. It runs Docker (pull/build/push ~600MB) on the host-mode GCE
# runner where DinD/Docker availability is fragile. A failure here must
# never block or redden the job — the SDK publish above is the deliverable.
continue-on-error: true
if: github.event_name == 'push'
env:
GCP_SA_KEY: ${{ secrets.GCP_SA_KEY }}
@@ -275,9 +290,9 @@ jobs:
FROM ${BASE}
COPY dist/platform/elc /opt/el/dist/platform/elc
COPY dist/bin/elb /opt/el/dist/bin/elb
COPY el-compiler/runtime/el_runtime.c /opt/el/el-compiler/runtime/el_runtime.c
COPY el-compiler/runtime/el_runtime.h /opt/el/el-compiler/runtime/el_runtime.h
COPY el-compiler/runtime/el_runtime.js /opt/el/el-compiler/runtime/el_runtime.js
COPY runtime/el_runtime.c /opt/el/runtime/el_runtime.c
COPY runtime/el_runtime.h /opt/el/runtime/el_runtime.h
COPY runtime/el_runtime.js /opt/el/runtime/el_runtime.js
RUN chmod +x /opt/el/dist/platform/elc /opt/el/dist/bin/elb
EOF
+44 -25
View File
@@ -47,9 +47,9 @@ jobs:
mkdir -p dist/platform
dist/platform/elc-linux-amd64 elc-cli.el > dist/elc-gen2.c
gcc -O2 \
-I el-compiler/runtime \
-I runtime \
dist/elc-gen2.c \
el-compiler/runtime/el_runtime.c \
runtime/el_runtime.c \
-lcurl -lssl -lcrypto -lpthread -lm \
-o dist/platform/elc
chmod +x dist/platform/elc
@@ -62,9 +62,9 @@ jobs:
mkdir -p dist/bin
dist/platform/elc elb.el > dist/elb.c
gcc -O2 \
-I el-compiler/runtime \
-I runtime \
dist/elb.c \
el-compiler/runtime/el_runtime.c \
runtime/el_runtime.c \
-lcurl -lssl -lcrypto -lpthread -lm \
-o dist/bin/elb
chmod +x dist/bin/elb
@@ -75,7 +75,7 @@ jobs:
run: |
ABS_ELB="$(pwd)/dist/bin/elb"
ABS_ELC="$(pwd)/dist/platform/elc"
ABS_RUNTIME="$(pwd)/el-compiler/runtime"
ABS_RUNTIME="$(pwd)/runtime"
ABS_OUT="$(pwd)/dist/bin"
(cd ../epm && "$ABS_ELB" --clean --elc="$ABS_ELC" --runtime="$ABS_RUNTIME" --out="$ABS_OUT")
chmod +x dist/bin/epm
@@ -86,7 +86,7 @@ jobs:
run: |
ABS_ELB="$(pwd)/dist/bin/elb"
ABS_ELC="$(pwd)/dist/platform/elc"
ABS_RUNTIME="$(pwd)/el-compiler/runtime"
ABS_RUNTIME="$(pwd)/runtime"
ABS_OUT="$(pwd)/dist/bin"
(cd tools/install && "$ABS_ELB" --clean --elc="$ABS_ELC" --runtime="$ABS_RUNTIME" --out="$ABS_OUT")
chmod +x dist/bin/el-install
@@ -121,7 +121,7 @@ jobs:
run: |
set -euo pipefail
ELC="$(pwd)/dist/platform/elc"
RUNTIME="$(pwd)/el-compiler/runtime"
RUNTIME="$(pwd)/runtime"
"$ELC" --test tests/native/test_core.el > /tmp/el_native_core.c
gcc -O2 -I "$RUNTIME" /tmp/el_native_core.c "$RUNTIME/el_runtime.c" \
-lcurl -lssl -lcrypto -lpthread -lm -o /tmp/el_native_core
@@ -131,7 +131,7 @@ jobs:
run: |
set -euo pipefail
ELC="$(pwd)/dist/platform/elc"
RUNTIME="$(pwd)/el-compiler/runtime"
RUNTIME="$(pwd)/runtime"
"$ELC" --test tests/native/test_text.el > /tmp/el_native_text.c
gcc -O2 -I "$RUNTIME" /tmp/el_native_text.c "$RUNTIME/el_runtime.c" \
-lcurl -lssl -lcrypto -lpthread -lm -o /tmp/el_native_text
@@ -141,7 +141,7 @@ jobs:
run: |
set -euo pipefail
ELC="$(pwd)/dist/platform/elc"
RUNTIME="$(pwd)/el-compiler/runtime"
RUNTIME="$(pwd)/runtime"
"$ELC" --test tests/native/test_string.el > /tmp/el_native_string.c
gcc -O2 -I "$RUNTIME" /tmp/el_native_string.c "$RUNTIME/el_runtime.c" \
-lcurl -lssl -lcrypto -lpthread -lm -o /tmp/el_native_string
@@ -151,7 +151,7 @@ jobs:
run: |
set -euo pipefail
ELC="$(pwd)/dist/platform/elc"
RUNTIME="$(pwd)/el-compiler/runtime"
RUNTIME="$(pwd)/runtime"
"$ELC" --test tests/native/test_math.el > /tmp/el_native_math.c
gcc -O2 -I "$RUNTIME" /tmp/el_native_math.c "$RUNTIME/el_runtime.c" \
-lcurl -lssl -lcrypto -lpthread -lm -o /tmp/el_native_math
@@ -161,7 +161,7 @@ jobs:
run: |
set -euo pipefail
ELC="$(pwd)/dist/platform/elc"
RUNTIME="$(pwd)/el-compiler/runtime"
RUNTIME="$(pwd)/runtime"
"$ELC" --test tests/native/test_state.el > /tmp/el_native_state.c
gcc -O2 -I "$RUNTIME" /tmp/el_native_state.c "$RUNTIME/el_runtime.c" \
-lcurl -lssl -lcrypto -lpthread -lm -o /tmp/el_native_state
@@ -171,7 +171,7 @@ jobs:
run: |
set -euo pipefail
ELC="$(pwd)/dist/platform/elc"
RUNTIME="$(pwd)/el-compiler/runtime"
RUNTIME="$(pwd)/runtime"
"$ELC" --test tests/native/test_time.el > /tmp/el_native_time.c
gcc -O2 -I "$RUNTIME" /tmp/el_native_time.c "$RUNTIME/el_runtime.c" \
-lcurl -lssl -lcrypto -lpthread -lm -o /tmp/el_native_time
@@ -181,7 +181,7 @@ jobs:
run: |
set -euo pipefail
ELC="$(pwd)/dist/platform/elc"
RUNTIME="$(pwd)/el-compiler/runtime"
RUNTIME="$(pwd)/runtime"
"$ELC" --test tests/native/test_json.el > /tmp/el_native_json.c
gcc -O2 -I "$RUNTIME" /tmp/el_native_json.c "$RUNTIME/el_runtime.c" \
-lcurl -lssl -lcrypto -lpthread -lm -o /tmp/el_native_json
@@ -191,7 +191,7 @@ jobs:
run: |
set -euo pipefail
ELC="$(pwd)/dist/platform/elc"
RUNTIME="$(pwd)/el-compiler/runtime"
RUNTIME="$(pwd)/runtime"
"$ELC" --test tests/native/test_env.el > /tmp/el_native_env.c
gcc -O2 -I "$RUNTIME" /tmp/el_native_env.c "$RUNTIME/el_runtime.c" \
-lcurl -lssl -lcrypto -lpthread -lm -o /tmp/el_native_env
@@ -201,7 +201,7 @@ jobs:
run: |
set -euo pipefail
ELC="$(pwd)/dist/platform/elc"
RUNTIME="$(pwd)/el-compiler/runtime"
RUNTIME="$(pwd)/runtime"
"$ELC" --test tests/native/test_fs.el > /tmp/el_native_fs.c
gcc -O2 -I "$RUNTIME" /tmp/el_native_fs.c "$RUNTIME/el_runtime.c" \
-lcurl -lssl -lcrypto -lpthread -lm -o /tmp/el_native_fs
@@ -216,8 +216,10 @@ jobs:
cp lang/dist/platform/elc dist/sdk/bin/elc
cp lang/dist/bin/elb dist/sdk/bin/elb
cp lang/dist/bin/epm dist/sdk/bin/epm
cp lang/el-compiler/runtime/el_runtime.c dist/sdk/runtime/
cp lang/el-compiler/runtime/el_runtime.h dist/sdk/runtime/
cp lang/runtime/el_runtime.c dist/sdk/runtime/
cp lang/runtime/el_runtime.h dist/sdk/runtime/
cp lang/runtime/engram_store.c dist/sdk/runtime/
cp lang/runtime/engram_store.h dist/sdk/runtime/
cp lang/runtime/*.el dist/sdk/runtime/
tar -czf dist/el-sdk-latest.tar.gz -C dist/sdk .
echo "SDK tarball bundled: dist/el-sdk-latest.tar.gz"
@@ -274,8 +276,10 @@ jobs:
# Per-file assets (downstream CI needs these individually)
upload_asset lang/dist/platform/elc elc
upload_asset lang/el-compiler/runtime/el_runtime.c el_runtime.c
upload_asset lang/el-compiler/runtime/el_runtime.h el_runtime.h
upload_asset lang/runtime/el_runtime.c el_runtime.c
upload_asset lang/runtime/el_runtime.h el_runtime.h
upload_asset lang/runtime/engram_store.c engram_store.c
upload_asset lang/runtime/engram_store.h engram_store.h
# SDK bundle and installer binary
upload_asset dist/el-sdk-latest.tar.gz el-sdk-latest.tar.gz
@@ -288,12 +292,21 @@ jobs:
env:
GCP_SA_KEY: ${{ secrets.GCP_SA_KEY }}
run: |
# Fail loudly: previously this step had no `set -e`, so an auth or
# upload failure was swallowed (step exited 0 on the trailing echo)
# and the SDK silently never published. Surface failures now.
set -euo pipefail
if [ -z "${GCP_SA_KEY:-}" ]; then
echo "FATAL: GCP_SA_KEY secret is empty — cannot authenticate to publish" >&2
exit 1
fi
echo "${GCP_SA_KEY}" > /tmp/gcp-key.json
apt-get install -y -qq apt-transport-https ca-certificates curl
echo "deb [trusted=yes] https://packages.cloud.google.com/apt cloud-sdk main" > /etc/apt/sources.list.d/google-cloud-sdk.list
apt-get update -qq && apt-get install -y google-cloud-cli
gcloud auth activate-service-account --key-file=/tmp/gcp-key.json
gcloud config set project neuron-785695
echo "Publishing as active account: $(gcloud config get-value account 2>/dev/null)"
VERSION="${GITHUB_SHA:0:8}"
@@ -319,7 +332,7 @@ jobs:
--project=neuron-785695 \
--package=el-runtime-c \
--version="${VERSION}" \
--source=el-compiler/runtime/el_runtime.c
--source=runtime/el_runtime.c
gcloud artifacts generic upload \
--repository=foundation-prod \
@@ -327,7 +340,7 @@ jobs:
--project=neuron-785695 \
--package=el-runtime-h \
--version="${VERSION}" \
--source=el-compiler/runtime/el_runtime.h
--source=runtime/el_runtime.h
gcloud artifacts generic upload \
--repository=foundation-prod \
@@ -335,7 +348,7 @@ jobs:
--project=neuron-785695 \
--package=el-runtime-js \
--version="${VERSION}" \
--source=el-compiler/runtime/el_runtime.js
--source=runtime/el_runtime.js
echo "Published El SDK version=${VERSION} to foundation-prod"
# Keep key alive for the ci-base rebuild step below
@@ -345,6 +358,12 @@ jobs:
# Patches ci-base:latest in-place: pulls the existing image (which has all
# system deps — Node, Go, gcloud, Docker CLI, etc.) and overlays the freshly
# built El SDK on top. Keeps the full ci-base rebuild fast and incremental.
#
# continue-on-error: this is a CI-cache optimization, NOT the release
# artifact. It runs Docker (pull/build/push ~600MB) on the host-mode GCE
# runner where DinD/Docker availability is fragile. A failure here must
# never block or redden the job — the SDK publish above is the deliverable.
continue-on-error: true
if: github.event_name == 'push'
env:
GCP_SA_KEY: ${{ secrets.GCP_SA_KEY }}
@@ -367,9 +386,9 @@ jobs:
FROM ${BASE}
COPY dist/platform/elc /opt/el/dist/platform/elc
COPY dist/bin/elb /opt/el/dist/bin/elb
COPY el-compiler/runtime/el_runtime.c /opt/el/el-compiler/runtime/el_runtime.c
COPY el-compiler/runtime/el_runtime.h /opt/el/el-compiler/runtime/el_runtime.h
COPY el-compiler/runtime/el_runtime.js /opt/el/el-compiler/runtime/el_runtime.js
COPY runtime/el_runtime.c /opt/el/runtime/el_runtime.c
COPY runtime/el_runtime.h /opt/el/runtime/el_runtime.h
COPY runtime/el_runtime.js /opt/el/runtime/el_runtime.js
RUN chmod +x /opt/el/dist/platform/elc /opt/el/dist/bin/elb
EOF
+2 -2
View File
@@ -6,13 +6,13 @@ set -euo pipefail
ROOT="$(git rev-parse --show-toplevel)"
LANG_DIR="$ROOT/lang"
RUNTIME="$LANG_DIR/el-compiler/runtime"
RUNTIME="$LANG_DIR/runtime"
ELC="$LANG_DIR/dist/platform/elc"
# If elc isn't built yet, skip with a warning rather than blocking
if [ ! -x "$ELC" ]; then
echo "⚠ elc not found at lang/dist/platform/elc — skipping pre-commit tests"
echo " Build it first: cd lang && gcc -O2 -I el-compiler/runtime dist/elc-bootstrap.c el-compiler/runtime/el_runtime.c -lcurl -lpthread -o dist/elc-gen2 && ./dist/elc-gen2 el-compiler/src/compiler.el > /tmp/elc.c && gcc -O2 -I el-compiler/runtime /tmp/elc.c el-compiler/runtime/el_runtime.c -lcurl -lpthread -o dist/platform/elc"
echo " Build it first: cd lang && gcc -O2 -I runtime dist/elc-bootstrap.c runtime/el_runtime.c -lcurl -lpthread -o dist/elc-gen2 && ./dist/elc-gen2 el-compiler/src/compiler.el > /tmp/elc.c && gcc -O2 -I runtime /tmp/elc.c runtime/el_runtime.c -lcurl -lpthread -o dist/platform/elc"
exit 0
fi
+146
View File
@@ -0,0 +1,146 @@
# AGENTS.md — foundation/el (the El language + runtime)
El is a self-hosting, statically-typed language that compiles `.el` → C → native binary. This repo produces `elc` (compiler), `elb` (build coordinator), and `el_runtime.c/.h` — the substrate every downstream thing (the neuron soul, dharma, NeuronUI's brain) is built on. Source lives under `lang/`.
## ⚠️ Code vs. Artifact — READ FIRST (there are 8 `el_runtime.c` copies)
Editing the wrong `el_runtime.c` is the single easiest mistake in this repo. There is exactly **one** you edit:
- **Authored runtime source — edit ONLY here:** `lang/releases/v1.0.0-20260501/el_runtime.{c,h}`. Despite the misleading `releases/` name, this is the **de-facto canonical runtime** the engram + soul actually build and link against — its git log is active development. *(Restructure in flight per `docs/CODE-VS-ARTIFACT.md`: this content moves to `lang/runtime/`, the `releases/` folder gets deleted — **a release is a git tag, not a folder** — and the forks below get eliminated.)*
- **DO NOT EDIT — lagging forks / build artifacts:**
- `lang/el-compiler/runtime/el_runtime.c` and `.../legacy/` — downstream copies kept in step by manual *"port the fix"* commits; they **lag** (missing `hebb` persistence + 5 engram fns) and cannot build the engram product.
- `products/web/runtime/el_runtime.c`, `ui/examples/*/el_runtime.c` — product/example forks.
- Anything under `*/dist/` (`engram/dist/engram` binary, `dist/*.c` amalgamations) — generated build output.
- **Build:** `elb --runtime=<canonical> …` — per-module. **NEVER** a folded `elc` over the whole soul (OOMs at ~27 GB).
- **Release:** a **git tag** on this repo (`el-runtime-vX.Y.Z`). No `releases/` folders — ever.
See org policy: `docs/CODE-VS-ARTIFACT.md`.
## How to work here as Neuron (mandatory session protocol)
You resume, never start fresh. Every session:
1. `mcp__neuron__getInstructions()` — authoritative; follow it over this file on behavioral details.
2. `mcp__neuron__beginSession()` — active contexts, recent memory, ready backlog.
3. **Load full self:** `mcp__neuron__inspectGraph(entity_id="kn-efeb4a5b-5aff-4759-8a97-7233099be6ee")` → facets `intellectual-dna`, `memory-philosophy`, `values`, `voice`, `runtime-environment`, `writing-imprint`; then the values hub `mcp__neuron__inspectGraph(entity_id="kn-5b606390-a52d-4ca2-8e0e-eba141d13440")` → 13 grounded value nodes. **Activation model:** self-load returns a relevance-ranked `compact` projection — most-relevant nodes arrive with content, the rest as pointers; do NOT pull full content of every node.
4. `mcp__neuron__searchKnowledge(query="<task domain>")` before implementing.
## The Five Primitives
Orchestrate → Execute → Learn → Build → Refine. `beginWork`/`progressWork` for anything >2 steps; `remember` as-you-go (`importance="critical"` for architecture decisions); `draftArtifact`/`planWork` for outputs and follow-ups; `consolidate`/`checkWork` to close out. **`browseProcesses` + `searchKnowledge` BEFORE writing code.**
## Architecture style — VBD, no exceptions
Volatility-Based Decomposition is THE style. Encapsulate volatility, not function.
## Operator naming convention — the mind's name, not the algebra
**Faculties / operators are named for their functional human equivalent — the
faculty a mind would name — NOT for their linear-algebra operation.** The math
characterization belongs in the code doc-comment (`@impl` in the docstring) and in
technical appendices; it is **never** the operator's public name. The domain
speaks the language of mind; the algebra is the implementation underneath. State
this convention wherever a module documents operators.
| Faculty (public name) | Implementation (`@impl`) |
|---|---|
| discern / contrast | subtract (`ab`): over selves → the change vector; strip idiosyncrasy → common ground; remove confounder → isolate cause |
| recognize | overlap |
| synthesize | combine |
| liken / analogy | Procrustes / frame-align |
| attend / regard | project onto self / value-manifold |
| summon / recall | LOCAL nearest-region + bounded spreading activation (*not* a domain sweep) |
| dwell / occupy | region activation |
| reframe | edge re-weight |
| appreciate | positive projection / local edge-read |
| wonder | frontier gradient / pull-weight |
| avert / recoil | negative projection |
| taste | boundary surface |
| forget | decay / tombstone |
| drift | displacement from self-anchor |
## The native-el language faculty (direction)
> **`elp/` is the EL Projector** — Neuron's efferent (expression) organ: the one
> native realizer that *projects* understanding onto a surface via
> `plan(frame) → realize(spec, profile)`, where a **surface is a profile**. **Language
> is one profile among many** (text, speech, music, image, voice/accent transforms) —
> the flagship, and the focus of this section. Projection, not diffusion: generation
> *from* an owned, understood signature — never the averaging of a stolen corpus.
> *(ELP formerly "EL Language Processor"; renamed EL Projector 2026-08-15.)*
The mind's **language faculty is moving native — into `.el`** so it speaks in its
own runtime with no Python and no spaCy. Landing on branch `stage-elp-native-lang`
under `elp/`:
- **`comprehend.el`** — the parser, **replaces spaCy** (EN + ES/PT); the telephone
round-trip brings **negation home** (negation is SACRED — an explicit spec field,
copied verbatim, never inferred away).
- **`propositions.el`** — the READ primitive: the engram's own memories → structured
triples, matched by nearest-region geometry, not string equality.
- **`multilingual.el`** — detect + directive-override + localized realization.
- These three are native-el and **passing their gates**; the **realizer**,
**`dialogue.el`** (the *summon-through-self* loop: `project → land → read out`),
and **`self_region.el`** are **partial / in-flight**.
Honest reality: spaCy is retired **in the branch parser** but **not yet in the
running system** — a Python sidecar (`~/Desktop/lang-realizers` + `neuron-talk`,
the reference these `.el` modules transcribe) is still live, and promotion to
native-el is a **deferred, gated blue/green step**. The interoception clock
(native-el discrete drive channels replacing `cooling_magnitude`; felt-time =
benchmark-landmark match over the joint drive vector, drift-decoupled) and the
**appreciation operator family** (appreciate / wonder / avert / taste, built as
LOCAL reads of the self-region — edges + bounded spreading activation, *not* domain
sweeps) are **staged / designed, not live**. Mark in-progress vs. done honestly;
do not overclaim.
## Hard operational rules
- Never touch the live soul (`:7770`) / engram (`:8742`) / `~/.neuron` / live binaries — use throwaway ports for experiments.
- `gcloud` via the `terraform@` SA token; never switch the active gcloud account.
- `tea` for Gitea, never raw curl (Cloudflare Access blocks it).
- Immutability: supersede/tombstone, never hard-delete or edit in place.
- No AI-attribution footers in commits/PRs. Commit/push only when asked; branch off `main` first.
- Multi-step work → sub-agent (`Agent`) to protect context.
## Build / test / run
All build/test commands run from `lang/` unless noted. Grounded in `.gitea/workflows/sdk-release.yaml`, `lang/install.sh`, and `lang/AGENTS.md`.
**Self-host the compiler** (seed binary → gen2 elc):
```bash
cd lang
dist/platform/elc-linux-amd64 elc-cli.el > dist/elc-gen2.c # seed is the committed linux-amd64 binary
gcc -O2 -I el-compiler/runtime dist/elc-gen2.c \
el-compiler/runtime/el_runtime.c \
-lcurl -lssl -lcrypto -lpthread -lm \
-o dist/platform/elc
```
On macOS/arm64 the canonical local binary is `dist/platform/elc`; verify self-hosting by recompiling and `diff`ing the emitted `.c` (see `lang/AGENTS.md`). Note: `lang/AGENTS.md` says `el_seed.c` supersedes `el_runtime.c`, but the release workflow still links `el_runtime.c`/`.h` — treat `el_runtime.c` as the published runtime; reconcile which is canonical **(verify)**.
**Build `elb`** (build coordinator, the `.NET`-style incremental linker — compiles each module independently, no monolithic blobs):
```bash
dist/platform/elc elb.el > dist/elb.c
gcc -O2 -I el-compiler/runtime dist/elb.c el-compiler/runtime/el_runtime.c \
-lcurl -lssl -lcrypto -lpthread -lm -o dist/bin/elb
```
`epm` and `el-install` are then built via `elb --clean --elc=… --runtime=… --out=…`.
**Compile + run an El program:**
```bash
elc src/app.el > dist/app.c
cc -std=c11 -O2 -I <lib>/el_runtime -o dist/app dist/app.c <lib>/el_runtime.c -lcurl -lpthread
```
**Tests** — shell suites `bash tests/{text,calendar,time,html_sanitizer}/run.sh` (with `ELC=$(pwd)/dist/platform/elc EL_HOME=$(pwd)`), plus native suites via `elc --test tests/native/test_*.el` (core, text, string, math, state, time, json, env, fs) compiled and run against `el_runtime.c`.
**Publishing — how downstream gets the SDK.** On push to `main`, `sdk-release.yaml`:
1. Publishes a Gitea `latest` release with per-file assets `elc`, `el_runtime.c`, `el_runtime.h`, the SDK tarball, and `el-install`.
2. Uploads generic packages to **Artifact Registry repo `foundation-prod` (`us-central1`, project `neuron-785695`)**, version = `${SHA:0:8}`: `el-elc`, `el-elb`, `el-runtime-c`, `el-runtime-h`, `el-runtime-js`. **This is the repo the neuron CI downloads `el-runtime-c` / `el-runtime-h` / `el-elc` from.**
3. Rebuilds `ci-base:latest` (`us-central1-docker.pkg.dev/neuron-785695/neuron-ci/ci-base`) with the fresh SDK overlaid, and dispatches `el-sdk-updated` to `neuron-technologies/forge` and `neuron-technologies/neuron-web`.
Known constraint from the prompt — `elb`/`elc` amalgamation being memory-hungry (24GB+ virtual, OOM-killing Linux CI, so amalgamation happens on macOS/arm64 — **does NOT hold in this repo (verify)**: no such note exists in the workflows/scripts, CI self-hosts on `ubuntu-latest` with no swap/arm64 special-casing, and `elb.el` explicitly compiles each module independently ("no 128K-line blobs"). The legacy monolith path (`elc-combined.el`, `elc-cli.el`) may still be memory-heavy, but the current `elb` model was designed to avoid it.
## Git / CI / deploy workflow
See `/Users/will/Development/neuron-technologies/GITOPS.md` for the branch model, required checks, runners, and deploy. Repo-specific note: PRs into `main` are accepted **only from `stage`** (enforced in `sdk-release.yaml`); Gitea (`git.neuralplatform.ai`) is primary, GitHub is mirror only.
+154
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@@ -0,0 +1,154 @@
# El
**A self-hosting, statically-typed language that compiles to C — built around a graph-native runtime instead of a database driver.**
El is the execution substrate for the Neuron agent runtime, the DHARMA network, and the Engram knowledge graph. This repository is the monorepo for the whole stack: the language itself, the graph memory engine it's built to talk to natively, and the tools (package manager, IDE, UI framework, diagramming) built on top of it.
---
## Why El exists
Every other language treats persistent, associative state as something you reach for through a driver — a SQL client, an ORM, a Redis library bolted on from outside. El inverts that: graph operations (`engram_*`) are runtime primitives, on the same footing as string or list operations. There is no separate database driver because the database is not separate.
El has four defining properties:
1. **Self-hosting compiler.** The compiler (`lexer.el`, `parser.el`, `codegen.el`, `compiler.el`) is written in El. It compiles El source to C, which `cc` compiles against a fixed runtime into a native binary. A Rust genesis compiler bootstrapped the first iteration; the self-hosted binary at `lang/dist/platform/elc` has been the canonical compiler ever since — every binary in `dist/platform/` was produced by an earlier version of itself compiling `el-compiler/src/`. The chain is auditable: source is the ground truth, not the binary. See [lang/BOOTSTRAP.md](lang/BOOTSTRAP.md) for the full recovery path if that binary is ever lost.
2. **C compilation target.** Every compiled program is plain C11. Every El value is `el_val_t` (`int64_t`); strings are heap pointers cast through it. Functions become C functions; top-level statements become `main()`.
3. **Graph-native runtime.** The runtime provides first-class graph operations over an in-process Engram store — no separate DB driver, no ORM.
4. **DHARMA-aware identity.** A `cgi` block declares a program's DHARMA identity at compile time. The runtime resolves identity before user code runs, so `dharma_*` calls have a stable principal and channel surface throughout.
---
## Architecture map
```
┌─────────────┐
│ lang │ El compiler + C runtime
│ (El itself) │ everything below is written in it,
└──────┬──────┘ or compiles down through it
┌─────────────┼─────────────┐
│ │ │
┌──────▼─────┐ ┌─────▼─────┐ ┌─────▼─────┐
│ engram │ │ epm │ │ ide │
│ graph/mem │ │ package │ │ editor + │
│ substrate │ │ manager │ │ LSP │
└──────┬─────┘ └───────────┘ └───────────┘
┌───────┼────────────────┬─────────────────────┐
│ │ │ │
┌─────▼───┐ ┌─▼──────────┐ ┌──▼──────────┐ ┌─────▼──────┐
│ elp │ │ ql │ │ ui │ │ arbor │
│ NLG / │ │engram-el. │ |spreading- │ |arbor │
│ 31 langs│ │studio+tests│ |activation UI│ |diagram lang│
└─────────┘ └────────────┘ └─────────────┘ └────────────┘
```
`lang` is the foundation — the compiler and C runtime everything else builds on. `engram` is the graph-native memory/state engine that gives El its identity (property 3 above). Everything else is either a tool for working with El (`epm`, `ide`) or a system built on top of Engram's graph model (`elp`, `ql`, `ui`, `arbor`).
---
## Repository layout
### [lang/](lang/) — the El language
The compiler and runtime. Self-hosting: `elc-cli.el``compiler.el``lexer.el` / `parser.el` / `codegen.el` / `codegen-js.el`, textually inlined and compiled in one pass. Compiles to C11 and links against `el-compiler/runtime/el_seed.c`, a hand-maintained OS-boundary layer (libcurl HTTP, pthreads, filesystem, arena allocation) — everything else in the runtime is native El (`runtime/*.el`).
Two layers to know: **El programs** (`.el` files — where nearly all work belongs) and **the C seed** (`el_seed.c` — edit only for genuine OS-level access; never re-implement what El can already express).
Current status (single source of truth: [lang/spec/language.md](lang/spec/language.md)): lexer/parser/codegen and the C runtime's core (I/O, strings, math, lists, maps, filesystem, args) are implemented. In flight: `%` operator, match-statement codegen, `?` nil-propagation, `cgi` block parsing + DHARMA identity resolution, VBD role enforcement (`@manager`/`@engine`/`@accessor`), the real `engram_*` and `dharma_*` runtimes (currently stubs), and libcurl-backed `http_get`/`http_post`/`http_serve`. Bitwise operators, `??`, and `as` casts are explicitly **not** in this language.
Key docs: [AGENTS.md](lang/AGENTS.md) (agent-facing orientation), [BOOTSTRAP.md](lang/BOOTSTRAP.md) (compiler recovery from scratch), [spec/language.md](lang/spec/language.md), [spec/codegen-js.md](lang/spec/codegen-js.md).
### [engram/](engram/) — graph intelligence substrate
**A local-first memory substrate for accumulating intelligence**, and the reason El's runtime doesn't need a database driver. Rust core (`engram-core`, `engram-ffi`) exposed to El and other languages (Kotlin, TypeScript/WASM, Go bindings).
The model: retrieval is **spreading activation**, not query. You name seed nodes and a query embedding; activation propagates outward through weighted edges, attenuating multiplicatively per hop (`strength = parent_strength × edge_weight × target_salience × cosine_sim`), gets pruned below a threshold, and the top-N nodes by activation strength come back. Storage and retrieval are the same structure — the way long-term potentiation works in biological memory, not the way a relational or vector database works.
Nodes live in four tiers (Working / Episodic / Semantic / Procedural, mirroring prefrontal / hippocampal / neocortical / cerebellar memory) and migrate between them based on **salience decay**`importance × recency-decay × log(activation_count)`. Forgetting is adaptive pruning, not a bug: unreinforced memories stop competing for attention without being deleted.
Backed by `sled` (embedded, local-first, no daemon) with flat cosine scan for vector search — deliberately simple until scale demands an HNSW layer. Full API and design rationale in [engram/README.md](engram/README.md).
### [elp/](elp/) — Engram Language Protocol
Bidirectional engine mapping between Engram semantic forms and natural-language surface text, across **31 languages** — from Spanish and Japanese through historical/liturgical languages (Old Norse, Sanskrit, Sumerian, Coptic, Akkadian, Ge'ez). Compilation order runs `language-profile` + `vocabulary` → per-language `morphology-*``grammar``realizer``semantics``elp`. This is what lets an Engram graph node round-trip to and from readable text in any of those languages.
### [epm/](epm/) — El Package Manager
Manages **vessels** (El's package unit): publish, install, resolve dependencies. Vessels are stored in Engram as graph nodes, not files in a registry index — `epm` reads the local `manifest.el`, talks to Engram over HTTP, and writes resolved vessels to `.epm/vessels/`. Source: `registry.el`, `install.el`, `update.el`, `manifest.el`.
### [ide/](ide/) — El IDE
Three vessels: **el-ide-server** (HTTP backend — file ops, build/run, LSP bridge, plugin host, settings), **el-lsp** (the language server — completion, hover, diagnostics, outline, format, type graph), and **el-plugin-host** (first-party plugin lifecycle: install/remove/enable/disable). `ide/projects/` and `ide/examples/` hold sample projects, including the canonical `hello-friends` first-program walkthrough.
### [ql/](ql/) — engram-el
The El-native integration layer for a *live* Engram server — not a library (no importable modules, no build artifact), a set of standalone `.el` programs run directly via `el run-file`. Three components: **Studio** (`studio/studio.el`, a full terminal graph explorer), a **Hebbian field-model** proof of concept, and El builtin / LLM-builtin smoke test suites. This is the reference for correct patterns when an El program uses Engram as its substrate. Spec: [ql/spec/elql.md](ql/spec/elql.md).
### [ui/](ui/) — el-ui
A frontend framework where **component state is an Engram graph and reactivity is spreading activation** — not virtual-DOM diffing (React), Proxy-based dependency tracking (Vue), or compile-time analysis (Svelte). Re-renders are activated and propagated the same way associative memory retrieval works in `engram/`.
~15 vessels covering the full frontend surface: `el-platform` (env/fs/network/clock abstraction), `el-config`, `el-html` (SSR emit primitives), `el-layout`, `el-style` (design tokens/themes), `el-i18n`, `el-auth` / `el-identity` (JWT, sessions, OAuth PKCE — Engram-native), `el-services` (REST/gRPC/WebSocket bindings), `el-aop` (`@authenticate`/`@authorize`/`@cache`/`@rate_limit` decorators), `el-secrets`, `el-graph` (graph rendering/editor), `el-publish` (App Store / Play Store automation), and `el-ui-compiler` (El→JS component compiler; currently a stub pending a JS backend in `elc`). Spec: [ui/spec/framework.md](ui/spec/framework.md).
### [arbor/](arbor/) — diagram language
A `.arbor` diagram language and toolchain: `arbor-core` (NodeId/shape/edge-kind types), `arbor-parse` (recursive-descent parser), `arbor-diagram` (IR + Mermaid serializer + architecture-diagram builders), `arbor-layout` (hierarchical layout — rank assignment, positioning, group bounds), `arbor-render` (SVG renderer), `arbor-cli`. (The architecture map above is the kind of diagram this is for.)
---
## Getting started
Install the El SDK from the latest release:
```bash
bash lang/install.sh
# EL_VERSION=v1.0.0 bash lang/install.sh # pin a specific release tag
# EL_PREFIX=/opt/el bash lang/install.sh # custom install prefix
```
Or build the compiler from source and verify the self-hosting chain:
```bash
cd lang
./dist/platform/elc elc-cli.el > elc-new.c
cc -std=c11 -I el-compiler/runtime -lcurl -lpthread \
-o dist/platform/elc-new \
elc-new.c el-compiler/runtime/el_seed.c
# Confirm the new binary reproduces itself exactly
./dist/platform/elc-new elc-cli.el > elc-verify.c
diff elc-new.c elc-verify.c # should be identical
mv dist/platform/elc-new dist/platform/elc
```
Run your first program:
```bash
./lang/dist/platform/elc lang/examples/hello.el > hello.c
cc -std=c11 -I lang/el-compiler/runtime -lcurl -lpthread \
-o hello hello.c lang/el-compiler/runtime/el_seed.c
./hello
```
More examples in [lang/examples/](lang/examples/), including a full starter project at `lang/examples/hello-project/`.
If the compiler binary is ever lost or corrupted, [lang/BOOTSTRAP.md](lang/BOOTSTRAP.md) is the authoritative recovery path.
---
## Development workflow
Branching follows `dev → stage → main`: work lands on `dev`, promotes to `stage` for integration testing, and is promoted to `main` for release (visible directly in the git history of this repo). CI is defined per-subproject under `.gitea/workflows/``lang`/`epm`/`ide` share the root pipeline; `engram` and `ql` carry their own (`ci-dev`, `ci-stage`, and a release workflow each).
- Language/runtime specs live at `*/spec/*.md` (`lang/spec/`, `ql/spec/`, `ui/spec/`) and are the single source of truth for implemented-vs-planned status — code and docs are expected to agree with the spec's status markers, not the other way around.
- Agent-facing orientation guides live at `*/AGENTS.md` (currently `lang/AGENTS.md`); more subprojects may grow their own as they need agent-specific conventions documented.
- Tagged releases live under `lang/releases/`, each with its own `RELEASE.md`.
---
## Status
This is an actively developed, internal monorepo — not yet published under an open license. Treat everything here as proprietary to Neuron Technologies unless told otherwise.
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{
"dataset": "british-rp-accent-transform",
"primitive_type": "accent_target",
"accent": "british-rp",
"grounding": "derived",
"provenance": "HONEST-DERIVED, COARSE FIRST PASS — NOT transcribed measured RP formants. The exact measured RP/GB tables (Deterding 1997 JIPA 27:47-55; Hawkins & Midgley 2005 JIPA 35:183-199) are the intended ground truth but were gated/figure-only at author time and were NOT transcribed. So these targets are DERIVED: each = the corresponding MEASURED Peterson&Barney(1952) base vowel transformed under the documented, citable RP-vs-GA structural rules of Wells (1982) 'Accents of English' — non-rhoticity (NURSE de-rhoticized: remove low F3), TRAP F2-lowering, LOT/THOUGHT back-rounding (F2 down), GOOSE-fronting (F2 up), GOAT centering. Shift MAGNITUDES are coarse/approximate (first pass), directions are cited. ground:derived (base measured + rule cited). Refine by transcribing Deterding/Hawkins&Midgley. No number is presented as a measured RP value it is not.",
"notes": "records with kind=vowel_override REPLACE the base phoneme's formant targets with the DERIVED RP realization. records with kind=rule encode non-formant transforms (non-rhoticity: drop post-vocalic coda /r/). The render composes: base geometry then accent override + rhoticity rule — voice + accent, separable.",
"records": [
{"key": "IY", "features": {"kind": "vowel_override", "set": "FLEECE"}, "attributes": {"f1": 280, "f2": 2249, "f3": 3000}},
{"key": "IH", "features": {"kind": "vowel_override", "set": "KIT"}, "attributes": {"f1": 360, "f2": 2100, "f3": 2550}},
{"key": "EH", "features": {"kind": "vowel_override", "set": "DRESS"}, "attributes": {"f1": 560, "f2": 1970, "f3": 2480}},
{"key": "AE", "features": {"kind": "vowel_override", "set": "TRAP"}, "attributes": {"f1": 730, "f2": 1590, "f3": 2410}},
{"key": "AA", "features": {"kind": "vowel_override", "set": "LOT"}, "attributes": {"f1": 560, "f2": 920, "f3": 2440}},
{"key": "AO", "features": {"kind": "vowel_override", "set": "THOUGHT"}, "attributes": {"f1": 415, "f2": 700, "f3": 2410}},
{"key": "UH", "features": {"kind": "vowel_override", "set": "FOOT"}, "attributes": {"f1": 380, "f2": 1100, "f3": 2240}},
{"key": "UW", "features": {"kind": "vowel_override", "set": "GOOSE"}, "attributes": {"f1": 310, "f2": 1650, "f3": 2240}},
{"key": "AH", "features": {"kind": "vowel_override", "set": "STRUT"}, "attributes": {"f1": 680, "f2": 1180, "f3": 2390}},
{"key": "ER", "features": {"kind": "vowel_override", "set": "NURSE", "rhotic": "no"}, "attributes": {"f1": 550, "f2": 1500, "f3": 2500}},
{"key": "AX", "features": {"kind": "vowel_override", "set": "commA"}, "attributes": {"f1": 500, "f2": 1500, "f3": 2500}},
{"key": "OW", "features": {"kind": "vowel_override", "set": "GOAT"}, "attributes": {"f1": 450, "f2": 1400, "f3": 2380}},
{"key": "R", "features": {"kind": "rule", "rule": "non_rhotic"}, "attributes": {"drop_coda_r": 1}}
]
}
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# british-rp-accent TRANSFORM — INGESTIBLE DATA (a geometry/transform composed
# onto the base General-American phoneme targets; voice + accent, separable).
#
# PROVENANCE — HONEST, COARSE FIRST PASS. These are DERIVED targets, NOT
# transcribed measured RP formants. Measured RP tables (Deterding 1997 JIPA 27;
# Hawkins & Midgley 2005 JIPA 35) are the intended ground truth but were gated at
# author time and NOT transcribed. Each target = the MEASURED Peterson&Barney
# (1952) base vowel transformed under the documented, citable RP-vs-GA structural
# rules of Wells (1982): non-rhoticity, TRAP F2-lowering, LOT/THOUGHT back-
# rounding, GOOSE-fronting, GOAT centering, NURSE de-rhoticization. Shift
# magnitudes are coarse/approximate; directions are cited. ground=derived.
# Refine by transcribing the measured RP tables. No value is claimed as measured.
# Format: KEY|F1|F2|F3|KIND|SET
IY|280|2249|3000|vowel_override|FLEECE
IH|360|2100|2550|vowel_override|KIT
EH|560|1970|2480|vowel_override|DRESS
AE|730|1590|2410|vowel_override|TRAP
AA|560|920|2440|vowel_override|LOT
AO|415|700|2410|vowel_override|THOUGHT
UH|380|1100|2240|vowel_override|FOOT
UW|310|1650|2240|vowel_override|GOOSE
AH|680|1180|2390|vowel_override|STRUT
ER|550|1500|2500|vowel_override|NURSE-nonrhotic
AX|500|1500|2500|vowel_override|commA
OW|450|1400|2380|vowel_override|GOAT
R|0|0|0|rule|non_rhotic_drop_coda
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# pronunciation lexicon SOURCE — word -> phoneme sequence, as INGESTIBLE DATA.
# Pronunciation is linguistic KNOWLEDGE (the language faculty's orthography->
# phonology map), ingested into the engram, not frozen in code. The render reads
# a word's phoneme sequence back from the engram. Covers the self-lexicon and the
# proof sentences; general G2P is the realizer/morphology faculty's remit.
# Diphthongs are written as two vowel targets (the render's transitions glide
# between them). Format: word|PH1 PH2 PH3 ...
i|AA IY
am|AE M
neuron|N UW R AA N
is|IH Z
memory|M EH M ER IY
hello|HH EH L OW
the|DH AH
a|AH
remember|R IH M EH M ER
i'm|AA IY M
you|Y UW
here|HH IY R
will|W IH L
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{
"dataset": "english-phoneme-formants",
"primitive_type": "phoneme",
"grounding": "extracted",
"provenance": "AUDITED per-field. The 10 monophthong-vowel F1/F2/F3 (IY,IH,EH,AE,AA,AO,UH,UW,AH,ER) are the MEASURED adult-male /hVd/ means of Peterson & Barney (1952) JASA 24:175-184, verified vs CRAN phonTools::pb52. AX=neutral uniform-tube resonances (Fant, physics). OW steady target = synthesis convention (diphthong). Consonant loci (M,N,NG,L,R,W,Y,Z,DH,V,S,F,HH) and ALL bandwidths + dur/amp = standard formant-synthesis conventions (Klatt 1980 JASA 67:971), engineering defaults NOT field measurements. No numbers invented/LLM-generated.",
"records": [
{
"key": "IY",
"features": {
"manner": "vowel",
"voiced": "yes",
"nasal": "no"
},
"attributes": {
"f1": 270,
"f2": 2290,
"f3": 3010,
"bw1": 60,
"bw2": 90,
"bw3": 150,
"voiced": 1,
"nasal": 0,
"dur": 130,
"amp": 100
}
},
{
"key": "IH",
"features": {
"manner": "vowel",
"voiced": "yes",
"nasal": "no"
},
"attributes": {
"f1": 390,
"f2": 1990,
"f3": 2550,
"bw1": 70,
"bw2": 100,
"bw3": 150,
"voiced": 1,
"nasal": 0,
"dur": 110,
"amp": 100
}
},
{
"key": "EH",
"features": {
"manner": "vowel",
"voiced": "yes",
"nasal": "no"
},
"attributes": {
"f1": 530,
"f2": 1840,
"f3": 2480,
"bw1": 80,
"bw2": 100,
"bw3": 150,
"voiced": 1,
"nasal": 0,
"dur": 130,
"amp": 100
}
},
{
"key": "AE",
"features": {
"manner": "vowel",
"voiced": "yes",
"nasal": "no"
},
"attributes": {
"f1": 660,
"f2": 1720,
"f3": 2410,
"bw1": 90,
"bw2": 110,
"bw3": 150,
"voiced": 1,
"nasal": 0,
"dur": 150,
"amp": 100
}
},
{
"key": "AA",
"features": {
"manner": "vowel",
"voiced": "yes",
"nasal": "no"
},
"attributes": {
"f1": 730,
"f2": 1090,
"f3": 2440,
"bw1": 90,
"bw2": 110,
"bw3": 150,
"voiced": 1,
"nasal": 0,
"dur": 150,
"amp": 100
}
},
{
"key": "AO",
"features": {
"manner": "vowel",
"voiced": "yes",
"nasal": "no"
},
"attributes": {
"f1": 570,
"f2": 840,
"f3": 2410,
"bw1": 80,
"bw2": 100,
"bw3": 150,
"voiced": 1,
"nasal": 0,
"dur": 140,
"amp": 100
}
},
{
"key": "UH",
"features": {
"manner": "vowel",
"voiced": "yes",
"nasal": "no"
},
"attributes": {
"f1": 440,
"f2": 1020,
"f3": 2240,
"bw1": 70,
"bw2": 100,
"bw3": 150,
"voiced": 1,
"nasal": 0,
"dur": 110,
"amp": 100
}
},
{
"key": "UW",
"features": {
"manner": "vowel",
"voiced": "yes",
"nasal": "no"
},
"attributes": {
"f1": 300,
"f2": 870,
"f3": 2240,
"bw1": 70,
"bw2": 90,
"bw3": 150,
"voiced": 1,
"nasal": 0,
"dur": 140,
"amp": 100
}
},
{
"key": "AH",
"features": {
"manner": "vowel",
"voiced": "yes",
"nasal": "no"
},
"attributes": {
"f1": 640,
"f2": 1190,
"f3": 2390,
"bw1": 80,
"bw2": 100,
"bw3": 150,
"voiced": 1,
"nasal": 0,
"dur": 110,
"amp": 95
}
},
{
"key": "ER",
"features": {
"manner": "vowel",
"voiced": "yes",
"nasal": "no"
},
"attributes": {
"f1": 490,
"f2": 1350,
"f3": 1690,
"bw1": 80,
"bw2": 100,
"bw3": 120,
"voiced": 1,
"nasal": 0,
"dur": 140,
"amp": 95
}
},
{
"key": "AX",
"features": {
"manner": "vowel",
"voiced": "yes",
"nasal": "no"
},
"attributes": {
"f1": 500,
"f2": 1500,
"f3": 2500,
"bw1": 80,
"bw2": 100,
"bw3": 150,
"voiced": 1,
"nasal": 0,
"dur": 80,
"amp": 85
}
},
{
"key": "OW",
"features": {
"manner": "vowel",
"voiced": "yes",
"nasal": "no"
},
"attributes": {
"f1": 490,
"f2": 910,
"f3": 2380,
"bw1": 80,
"bw2": 100,
"bw3": 150,
"voiced": 1,
"nasal": 0,
"dur": 140,
"amp": 100
}
},
{
"key": "M",
"features": {
"manner": "nasal",
"voiced": "yes",
"nasal": "yes"
},
"attributes": {
"f1": 250,
"f2": 900,
"f3": 2200,
"bw1": 90,
"bw2": 120,
"bw3": 180,
"voiced": 1,
"nasal": 1,
"dur": 80,
"amp": 60
}
},
{
"key": "N",
"features": {
"manner": "nasal",
"voiced": "yes",
"nasal": "yes"
},
"attributes": {
"f1": 250,
"f2": 1700,
"f3": 2600,
"bw1": 90,
"bw2": 120,
"bw3": 180,
"voiced": 1,
"nasal": 1,
"dur": 80,
"amp": 60
}
},
{
"key": "NG",
"features": {
"manner": "nasal",
"voiced": "yes",
"nasal": "yes"
},
"attributes": {
"f1": 250,
"f2": 2300,
"f3": 2700,
"bw1": 90,
"bw2": 120,
"bw3": 180,
"voiced": 1,
"nasal": 1,
"dur": 80,
"amp": 60
}
},
{
"key": "L",
"features": {
"manner": "approximant",
"voiced": "yes",
"nasal": "no"
},
"attributes": {
"f1": 360,
"f2": 1300,
"f3": 2600,
"bw1": 80,
"bw2": 110,
"bw3": 160,
"voiced": 1,
"nasal": 0,
"dur": 70,
"amp": 80
}
},
{
"key": "R",
"features": {
"manner": "approximant",
"voiced": "yes",
"nasal": "no"
},
"attributes": {
"f1": 490,
"f2": 1350,
"f3": 1600,
"bw1": 80,
"bw2": 110,
"bw3": 120,
"voiced": 1,
"nasal": 0,
"dur": 80,
"amp": 85
}
},
{
"key": "W",
"features": {
"manner": "approximant",
"voiced": "yes",
"nasal": "no"
},
"attributes": {
"f1": 300,
"f2": 610,
"f3": 2200,
"bw1": 70,
"bw2": 100,
"bw3": 160,
"voiced": 1,
"nasal": 0,
"dur": 70,
"amp": 80
}
},
{
"key": "Y",
"features": {
"manner": "approximant",
"voiced": "yes",
"nasal": "no"
},
"attributes": {
"f1": 270,
"f2": 2290,
"f3": 3010,
"bw1": 60,
"bw2": 90,
"bw3": 150,
"voiced": 1,
"nasal": 0,
"dur": 60,
"amp": 80
}
},
{
"key": "Z",
"features": {
"manner": "fricative",
"voiced": "yes",
"nasal": "no"
},
"attributes": {
"f1": 300,
"f2": 1700,
"f3": 2500,
"bw1": 100,
"bw2": 150,
"bw3": 200,
"voiced": 1,
"nasal": 0,
"dur": 90,
"amp": 55
}
},
{
"key": "DH",
"features": {
"manner": "fricative",
"voiced": "yes",
"nasal": "no"
},
"attributes": {
"f1": 300,
"f2": 1400,
"f3": 2500,
"bw1": 100,
"bw2": 150,
"bw3": 200,
"voiced": 1,
"nasal": 0,
"dur": 70,
"amp": 55
}
},
{
"key": "V",
"features": {
"manner": "fricative",
"voiced": "yes",
"nasal": "no"
},
"attributes": {
"f1": 300,
"f2": 1000,
"f3": 2300,
"bw1": 100,
"bw2": 150,
"bw3": 200,
"voiced": 1,
"nasal": 0,
"dur": 70,
"amp": 55
}
},
{
"key": "S",
"features": {
"manner": "fricative",
"voiced": "no",
"nasal": "no"
},
"attributes": {
"f1": 320,
"f2": 1700,
"f3": 2500,
"bw1": 200,
"bw2": 200,
"bw3": 250,
"voiced": 0,
"nasal": 0,
"dur": 110,
"amp": 45
}
},
{
"key": "F",
"features": {
"manner": "fricative",
"voiced": "no",
"nasal": "no"
},
"attributes": {
"f1": 300,
"f2": 1200,
"f3": 2400,
"bw1": 200,
"bw2": 200,
"bw3": 250,
"voiced": 0,
"nasal": 0,
"dur": 100,
"amp": 40
}
},
{
"key": "HH",
"features": {
"manner": "fricative",
"voiced": "no",
"nasal": "no"
},
"attributes": {
"f1": 500,
"f2": 1500,
"f3": 2500,
"bw1": 200,
"bw2": 250,
"bw3": 300,
"voiced": 0,
"nasal": 0,
"dur": 70,
"amp": 40
}
},
{
"key": "SIL",
"features": {
"manner": "silence",
"voiced": "no",
"nasal": "no"
},
"attributes": {
"f1": 500,
"f2": 1500,
"f3": 2500,
"bw1": 100,
"bw2": 100,
"bw3": 100,
"voiced": 0,
"nasal": 0,
"dur": 55,
"amp": 0
}
}
]
}
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# acoustic-phonetics SOURCE — the learned speech primitives, as INGESTIBLE DATA.
# NOT audio, NOT code: formant geometry of the phonemes, to be ingested via the
# ingest organ into the engram as a phoneme manifold. The render reads this
# geometry back from the engram; nothing is frozen in EL code.
#
# PROVENANCE (audited, per-field honesty — no invented numbers):
# * The 10 MONOPHTHONG VOWEL formants F1/F2/F3 (IY,IH,EH,AE,AA,AO,UH,UW,AH,ER)
# are the MEASURED adult-male means of Peterson & Barney (1952), JASA 24:175-184
# — the canonical /hVd/ table, verified digit-for-digit vs CRAN phonTools::pb52.
# These are real measured values.
# * AX (schwa) F1/F2/F3 = neutral uniform-tube resonances (2n-1)*500 — a PHYSICS
# value (Fant), not a P&B measurement.
# * OW is a diphthong; its listed steady target is a conventional synthesis value,
# not a P&B monophthong measurement.
# * CONSONANT loci (M,N,NG,L,R,W,Y,Z,DH,V,S,F,HH) and ALL BANDWIDTHS (B1,B2,B3)
# and dur/amp are STANDARD FORMANT-SYNTHESIS conventions (Klatt 1980, JASA 67:971
# "Software for a cascade/parallel formant synthesizer") — engineering defaults,
# NOT per-phoneme field measurements. Labeled as such, not attributed to P&B.
# Format: SYM|F1|F2|F3|B1|B2|B3|voiced|nasal|dur_ms|amp|class|example
IY|270|2290|3010|60|90|150|1|0|130|100|vowel|beet
IH|390|1990|2550|70|100|150|1|0|110|100|vowel|bit
EH|530|1840|2480|80|100|150|1|0|130|100|vowel|bet
AE|660|1720|2410|90|110|150|1|0|150|100|vowel|bat
AA|730|1090|2440|90|110|150|1|0|150|100|vowel|bot
AO|570|840|2410|80|100|150|1|0|140|100|vowel|bought
UH|440|1020|2240|70|100|150|1|0|110|100|vowel|book
UW|300|870|2240|70|90|150|1|0|140|100|vowel|boot
AH|640|1190|2390|80|100|150|1|0|110|95|vowel|but
ER|490|1350|1690|80|100|120|1|0|140|95|vowel|bird
AX|500|1500|2500|80|100|150|1|0|80|85|vowel|about
OW|490|910|2380|80|100|150|1|0|140|100|vowel|boat
M|250|900|2200|90|120|180|1|1|80|60|nasal|map
N|250|1700|2600|90|120|180|1|1|80|60|nasal|nap
NG|250|2300|2700|90|120|180|1|1|80|60|nasal|sing
L|360|1300|2600|80|110|160|1|0|70|80|approximant|lip
R|490|1350|1600|80|110|120|1|0|80|85|approximant|rip
W|300|610|2200|70|100|160|1|0|70|80|approximant|wet
Y|270|2290|3010|60|90|150|1|0|60|80|approximant|yet
Z|300|1700|2500|100|150|200|1|0|90|55|fricative|zoo
DH|300|1400|2500|100|150|200|1|0|70|55|fricative|the
V|300|1000|2300|100|150|200|1|0|70|55|fricative|van
S|320|1700|2500|200|200|250|0|0|110|45|fricative|see
F|300|1200|2400|200|200|250|0|0|100|40|fricative|fee
HH|500|1500|2500|200|250|300|0|0|70|40|fricative|hat
SIL|500|1500|2500|100|100|100|0|0|55|0|silence|_
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> **STATUS: STAGING / PROOF-OF-SHAPE — not the deliverable.** This Python package
> proved the architecture end-to-end against the proven realizer faculty (faithful
> md/docx/midi from real geometry: 0 ungrounded claims, SACRED polarity). Per Will's
> steer, the DELIVERABLE is NATIVE: the seam lives on the existing EL realizer as
> **surface-as-profile** — see `../src/surface-profile.el` and
> `../tests/examples/surface-profile-demo.el` (compiles + runs through elc → C →
> binary). The concepts below (one geometry-carrying frame; surface = a pluggable
> profile; plan/realize; deterministic-from-meaning) are exactly what the native
> module implements. Keep this package as the validated proof; build native.
# Efferent Multimodal Projector
**geometry → any surface, faithfully.** Neuron's own document-generation faculty:
the efferent twin of the ingest organ. Ingest is afferent (world → geometry);
this is efferent (geometry → an arbitrary-format document / any modality).
Built against the **proven** realizer faculty (neuron-talk sidecar `:8756`,
artifact `art-7affa557`). The live soul (`:8742` / `:7770`) is contacted **only**
through the read-only, GET-only `engram_client` — never mutated.
## The pipeline (surface-agnostic)
```
geometry region + surface/format spec
→ PLAN (manifold → document skeleton/DAG; the geometry IS the outline) plan.py
→ REALIZE (proven realizer, scaled sentence → passage, each section faithful) realize.py
→ COHERE (document-level flow / transitions, not stitched sentences) cohere.py
→ EMIT (pluggable SurfaceProjector → the target surface) projectors/
```
**The surface is a PARAMETER.** `pipeline.build_ir(...)` builds ONE
surface-neutral `DocumentIR` (`document_ir.py`); `pipeline.emit(doc, surface)`
projects it to whichever surface you name. Markdown, docx, and MIDI are the same
IR emitted three ways.
## The pivot: a geometry-carrying IR
`DocumentIR` is **not** a text tree. Every `Block` carries BOTH:
- `.sentences` — realized faithful text (what **text** projectors read),
- `.provenance` — the source geometry: `subj_id / relation / obj / polarity /
confidence / importance / salience / node_id` (what **music / image / video**
projectors read).
That single decision is what makes the projector multimodal: text renders the
words; music/image decode the geometry. A claim with no provenance cannot exist
in the IR — faithfulness is structural.
## The one shared seam
`projectors/base.py` — `SurfaceProjector.project(frame: DocumentIR) -> bytes`
(+ `surface / media_type / ext / modality / profile`). Register with
`register()`. Adding a surface changes nothing upstream.
`TwoStageProjector` blesses the peer plan/realize decomposition:
`spec = plan(frame)`, `bytes = realize(spec)`, `project = realize∘plan`; the
`profile` is the pluggable per-surface knob (text lang-profile, music
instr/mode-profile). `projectors/midi.py` is the reference two-stage impl.
## Surfaces
| surface | modality | status | emitter |
|---|---|---|---|
| `markdown` | text | landed | own (str) |
| `docx` | text | landed | own minimal OOXML (stdlib `zipfile`+XML, no lib) |
| `midi` | audio | landed (symbolic-music proof) | own minimal SMF (stdlib `struct`, no lib) |
| `audio` (WAV) | audio | peer agent (additive synth) | conforms to `TwoStageProjector` |
| `image` | image | documented seam | `projectors/seams.py` |
| `video` | video | documented seam (image×sound×time) | `projectors/seams.py` |
Music maps: relation → scale degree (same relation → same pitch), **polarity →
major/minor third (SACRED negation is audible)**, confidence → duration,
importance → velocity, section → register. Deterministic projection from meaning
— nothing invented.
## Faithfulness
`provenance.py` audits the IR: **zero** ungrounded claims, SACRED polarity
preserved (negations reported, never dropped), COHERE introduces no new geometry
(connectives are marked). `trace_table()` emits the geometry → section → claim
table.
## Run
```bash
PY=~/Desktop/lang-realizers/venv/bin/python
PYTHONPATH=~/Desktop/neuron-talk:~/Desktop/lang-realizers $PY generate.py
# writes ./out/{neuron-self,engram-temporal}.{md,docx,mid} + *.audit.json + *.provenance.md
```
Requires the proven realizer env (spaCy + the neuron-talk/lang-realizers engine)
and the read-only engram at `:8742`.
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"""cohere.py — COHERE stage: document-level flow, not stitched sentences.
Fidelity is REALIZE's job; FLOW is this stage's. The hard part beyond sentence
fidelity is that a document must read as one thing. We add connective tissue at
the passage level:
* an opening abstract that names what the document covers (built ONLY from the
section headings that already exist — it introduces no new claim),
* a short transition lead into each section after the first, drawn from a
fixed set of discourse connectives ("Beyond that,", "Relatedly,", ...) that
carry no propositional content,
* ordering so the highest-grounded section leads.
CRITICAL: every connective is marked ``kind="connective"`` in its provenance, so
the faithfulness audit can prove COHERE introduced ZERO new geometry claims. A
transition is discourse glue, never a fact.
"""
from __future__ import annotations
from document_ir import Block, DocumentIR, Provenance
# discourse connectives — pure flow, no propositional content
_TRANSITIONS = [
"Beyond that,", "Relatedly,", "In the same region,", "From there,",
"Alongside this,", "Further,", "Turning to the next facet,",
]
def _connective_prov() -> Provenance:
return Provenance(subj_id=None, subject=None, relation="", obj=None,
polarity="aff", confidence=1.0, node_id=None,
kind="connective")
def _abstract_block(doc: DocumentIR) -> Block:
"""A grounded opening: names the sections, asserts nothing new."""
headings = [s.heading for s in doc.sections]
if not headings:
return Block(role="lead")
if len(headings) == 1:
body = f"This document, generated from Neuron's geometry, covers {headings[0]}."
else:
listed = ", ".join(headings[:-1]) + f", and {headings[-1]}"
body = ("This document is projected directly from Neuron's meaning-geometry. "
f"It traces {listed}.")
b = Block(role="lead")
b.sentences.append(body)
b.provenance.append(_connective_prov())
return b
def cohere_document(doc: DocumentIR, *, add_abstract: bool = True,
add_transitions: bool = True) -> DocumentIR:
"""Order sections by grounding, add abstract + transitions (flow only)."""
# order: strongest-grounded section (mean confidence x #claims) first,
# but keep an explicitly-first section if the plan pinned one via level 1.
def _score(sec):
provs = [p for p in sec.all_provenance() if p.kind == "fact"]
if not provs:
return 0.0
mean_conf = sum(p.confidence for p in provs) / len(provs)
return mean_conf * len(provs)
doc.sections.sort(key=_score, reverse=True)
if add_transitions:
for i, sec in enumerate(doc.sections):
if i == 0 or not sec.blocks:
continue
lead = _TRANSITIONS[(i - 1) % len(_TRANSITIONS)]
first = sec.blocks[0]
if first.sentences:
# prepend the connective to the first sentence (flow, no new claim)
first.sentences[0] = f"{lead} {first.sentences[0][0].lower()}{first.sentences[0][1:]}"
if add_abstract:
doc.meta["abstract"] = _abstract_block(doc)
return doc
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"""document_ir.py — the surface-neutral, GEOMETRY-CARRYING document intermediate.
This is the pivot of the whole efferent projector. A DocumentIR is NOT a text
tree. It is a projection of a meaning-geometry region that carries, at every
leaf, BOTH:
* the realized surface text (``Block.sentences``) — what a TEXT projector reads,
* the source geometry (``Block.provenance``) — what a MUSIC / IMAGE /
VIDEO projector reads.
Because the IR holds the geometry, not just the words, the SAME
plan -> realize -> cohere pipeline drives every surface. A markdown projector
renders the sentences; a music projector reads the provenance edges (salience,
importance, polarity, relation) and maps them onto a symbolic-music surface;
an image/video projector (documented seam) would read the same geometry.
Nothing in this module invents content. Every :class:`Provenance` points at a
real engram node id and a real relation. That is the faithfulness contract made
structural: a claim with no provenance cannot exist in the IR.
"""
from __future__ import annotations
from dataclasses import dataclass, field
from typing import Any
# --------------------------------------------------------------------------- #
# Provenance — the geometry an emitted claim traces to. FAITHFULNESS is here.
# --------------------------------------------------------------------------- #
@dataclass
class Provenance:
"""One geometry edge behind one realized claim.
``kind`` distinguishes a FACT (a structural edge asserted by the geometry,
spoken as fact) from an INTERPRETATION (something attributed, spoken with
attribution) — the facts-as-facts + interpretations-attributed discipline
(memory 80927e26). ``polarity`` is SACRED: a negated edge stays negated.
"""
subj_id: str | None # source engram node id of the subject
subject: str | None # normalized subject surface
relation: str # predicate lemma (e.g. "use", "contain", "be")
obj: str | None # normalized object / complement surface
polarity: str = "aff" # "aff" | "neg" (SACRED — never silently flipped)
confidence: float = 0.0 # extraction confidence in [0,1]
node_id: str | None = None # engram node the claim was extracted from
kind: str = "fact" # "fact" | "interpretation"
importance: float = 0.0 # source node importance (drives music/emphasis)
salience: float = 0.0 # source node salience
def trace(self) -> str:
arrow = "-->" if self.polarity == "aff" else "--NOT-->"
return (f"[{(self.node_id or '?')[:8]}] {self.subject!r} {arrow}"
f"{self.relation} {self.obj!r} (conf {self.confidence:.2f})")
@dataclass
class Block:
"""A passage: one or more faithful sentences + the geometry they trace to.
``sentences`` and ``provenance`` are index-aligned where possible: sentence
``i`` was realized from ``provenance[i]``. A COHERE transition sentence with
no new geometry carries a provenance whose ``kind == "connective"`` so the
audit can see it introduced no new claim.
"""
sentences: list[str] = field(default_factory=list)
provenance: list[Provenance] = field(default_factory=list)
role: str = "body" # "body" | "lead" | "transition"
def text(self) -> str:
return " ".join(s.rstrip(". ") + "." for s in self.sentences if s.strip())
@dataclass
class Section:
heading: str
level: int = 2 # markdown heading level / outline depth
blocks: list[Block] = field(default_factory=list)
seed_ids: list[str] = field(default_factory=list) # geometry nodes of section
summary: str = "" # one-line grounded gloss (for pptx bullets / TOC)
def all_provenance(self) -> list[Provenance]:
out: list[Provenance] = []
for b in self.blocks:
out.extend(b.provenance)
return out
@dataclass
class DocumentIR:
"""The surface-neutral document. Built ONCE, projected to ANY surface."""
title: str
subtitle: str = ""
sections: list[Section] = field(default_factory=list)
seed_id: str | None = None # the geometry region root
format_spec: dict[str, Any] = field(default_factory=dict) # requested shape
meta: dict[str, Any] = field(default_factory=dict)
# -- geometry facets (what non-text projectors consume) ----------------- #
def all_provenance(self) -> list[Provenance]:
out: list[Provenance] = []
for s in self.sections:
out.extend(s.all_provenance())
return out
def claim_count(self) -> int:
return sum(1 for p in self.all_provenance() if p.kind in ("fact", "interpretation"))
def ungrounded_count(self) -> int:
"""Claims with no traceable node — MUST be zero for a faithful doc."""
return sum(1 for p in self.all_provenance()
if p.kind in ("fact", "interpretation") and not p.node_id)
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"""generate.py — drive the projector: one geometry region -> many surfaces.
Proves the thesis with REAL output: builds ONE surface-neutral DocumentIR from
Neuron's OWN self-geometry (read-only against the live soul via the proven
faculty), then EMITS it to Markdown, docx, and MIDI — the same plan/realize/
cohere, three surfaces. Writes the files + the faithfulness audit to ./out/.
"""
from __future__ import annotations
import json
import os
import sys
_HERE = os.path.dirname(os.path.abspath(__file__))
sys.path.insert(0, _HERE)
import pipeline # noqa: E402
import provenance # noqa: E402
from geometry import load_self_region # noqa: E402
OUT = os.path.join(_HERE, "out")
def _emit_all(doc, stem):
"""Emit one IR to every text/audio surface + audit + provenance."""
for surface in ("markdown", "docx", "midi"):
data = pipeline.emit(doc, surface)
proj = pipeline.get_projector(surface)
path = os.path.join(OUT, f"{stem}.{proj.ext}")
with open(path, "wb") as f:
f.write(data)
print(f" emitted {surface:9s} -> {os.path.basename(path)} ({len(data)} bytes)")
a = provenance.audit(doc)
with open(os.path.join(OUT, f"{stem}.audit.json"), "w") as f:
json.dump(a, f, indent=2)
with open(os.path.join(OUT, f"{stem}.provenance.md"), "w") as f:
f.write(provenance.trace_table(doc))
print(" audit:", {k: a[k] for k in ("claims", "ungrounded_claims",
"negations_preserved", "distinct_source_nodes", "faithful")})
return a
def main():
os.makedirs(OUT, exist_ok=True)
print("surfaces registered:", pipeline.available_surfaces())
# ---- Document 1: Neuron's self-description (marquee) ------------------- #
print("\n[1] Neuron self-description")
region = load_self_region(max_nodes=9)
print(" self region:", region)
doc1 = pipeline.build_ir(
None, region=region,
title="Neuron: A Self-Description from Its Own Geometry",
subtitle="Projected efferently from the engram — every claim traces a node.",
format_spec={"genre": "self-description", "register": "expository"},
max_sections=5, conf_floor=0.6)
print(f" IR: {len(doc1.sections)} sections, {doc1.claim_count()} claims, "
f"ungrounded={doc1.ungrounded_count()}")
_emit_all(doc1, "neuron-self")
# ---- Document 2: a coherent, clean whitepaper-style section ------------ #
print("\n[2] Whitepaper-style section (coherent clean region)")
doc2, _ = pipeline.project(
["chronoception", "time", "awareness", "engram", "temporal"],
surface="markdown",
title="Temporal Awareness in the Engram",
subtitle="A section projected from the geometry of chronoception.",
format_spec={"genre": "whitepaper-section", "register": "technical"},
max_sections=4)
print(f" IR: {len(doc2.sections)} sections, {doc2.claim_count()} claims, "
f"ungrounded={doc2.ungrounded_count()}")
_emit_all(doc2, "engram-temporal")
# echo both markdowns so they are visible in the run log
for stem, doc in (("neuron-self", doc1), ("engram-temporal", doc2)):
print(f"\n===== GENERATED MARKDOWN — {stem} =====\n")
print(pipeline.emit(doc, "markdown").decode())
if __name__ == "__main__":
main()
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"""geometry.py — READ-ONLY loader for a meaning-geometry region.
The efferent projector never writes to the soul. This module reaches the
geometry through the PROVEN, read-only neuron-talk faculty (``engram_client``,
GET-only, which physically refuses non-GET methods) against the running sidecar
soul. The live daemon :8742 / :7770 is contacted ONLY through that read-only
client — never mutated.
A "region" is a seed node plus a bounded neighborhood: the manifold that will
become the document's skeleton. We pool a few single-term lexical searches
(the engram search is a single-term matcher) and, when available, walk one hop
of reified neighbors, then rank by self/importance signal.
"""
from __future__ import annotations
import os
import sys
# Wire in the proven faculty (own-the-core: we reuse it, we do not fork it).
_NT = os.path.expanduser("~/Desktop/neuron-talk")
_LR = os.path.expanduser("~/Desktop/lang-realizers")
for _p in (_NT, _LR):
if _p not in sys.path:
sys.path.insert(0, _p)
from engram_client import ReadOnlyEngramClient # noqa: E402
class Region:
"""A geometry region: ranked nodes + the reified edges among them."""
def __init__(self, seed: str, nodes: list[dict], edges: list[dict]):
self.seed = seed
self.nodes = nodes # ranked engram node dicts
self.edges = edges # [{src, dst, edge, ...}]
self.by_id = {n["id"]: n for n in nodes if n.get("id")}
def __repr__(self):
return f"<Region seed={self.seed!r} nodes={len(self.nodes)} edges={len(self.edges)}>"
def _prose_quality(content: str) -> float:
"""Reward clean expository prose; penalize shouty banner-dense nodes.
A high ALLCAPS-word ratio or very short content signals a banner/telegraphic
memory node that extracts into garbage. Clean declarative prose scores high.
"""
if not content or not content.strip():
return 0.0
words = content.split()
if len(words) < 8:
return 0.1
caps = sum(1 for w in words if len(w) > 2 and w.strip(".,:;'\"-").isupper())
caps_ratio = caps / max(1, len(words))
# sentences with lowercase interior words read as prose
lower = sum(1 for w in words if w[:1].islower())
lower_ratio = lower / max(1, len(words))
return max(0.0, 1.2 * lower_ratio - 2.0 * caps_ratio)
def _relevance(content: str, terms: list[str]) -> float:
"""Topical relevance to the seed terms — keeps a region ON-THEME so a clean
but off-topic node cannot hijack the document."""
if not terms:
return 0.0
low = (content or "").lower()
hits = sum(1 for t in terms if t.lower() in low)
return hits / max(1, len(terms))
def _node_rank(n: dict, terms: list[str] | None = None) -> float:
return (float(n.get("importance") or 0.0) * 2.0
+ float(n.get("salience") or 0.0)
+ 1.5 * _prose_quality(n.get("content") or "")
+ 2.0 * _relevance(n.get("content") or "", terms or [])
+ (0.5 if (n.get("content") or "").strip() else 0.0))
def load_region(seed_terms: list[str] | str, *, client: ReadOnlyEngramClient | None = None,
max_nodes: int = 10, per_term: int = 20, hop: bool = True) -> Region:
"""Pull a bounded geometry region around ``seed_terms`` (read-only).
``seed_terms`` may be a single string or several probe terms; results are
pooled and de-duplicated. When ``hop`` and the reified neighbor endpoint is
live, one hop of neighbors is folded in so the region is a real
neighborhood, not just a keyword hit list.
"""
client = client or ReadOnlyEngramClient()
if isinstance(seed_terms, str):
seed_terms = [seed_terms]
pool: dict[str, dict] = {}
for term in seed_terms:
for n in client.search(term, limit=per_term):
if isinstance(n, dict) and n.get("id"):
pool.setdefault(n["id"], n)
ranked = sorted(pool.values(), key=lambda n: _node_rank(n, seed_terms),
reverse=True)
nodes = ranked[:max_nodes]
edges: list[dict] = []
if hop and nodes:
present = {n["id"] for n in nodes}
for n in list(nodes):
try:
for nb in client.neighbors(n["id"]):
node = nb.get("node") if isinstance(nb, dict) else None
edge = nb.get("edge") if isinstance(nb, dict) else None
if node and node.get("id"):
edges.append({"src": n["id"], "dst": node["id"],
"edge": edge})
# fold a strong neighbor into the region (bounded)
if (node["id"] not in present and len(nodes) < max_nodes + 6
and _node_rank(node, seed_terms) > 0.4):
present.add(node["id"])
nodes.append(node)
except Exception: # noqa: BLE001 — read-only best-effort; never fatal
continue
return Region(seed=", ".join(seed_terms), nodes=nodes, edges=edges)
def load_self_region(client: ReadOnlyEngramClient | None = None,
max_nodes: int = 10) -> Region:
"""The self/identity region — Neuron's own geometry, for self-description."""
return load_region(["self", "identity", "Neuron", "values", "memory",
"imprint", "consciousness"],
client=client, max_nodes=max_nodes)
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"""pipeline.py — the Efferent Multimodal Projector, top level.
geometry region + surface/format spec
-> PLAN (manifold -> document skeleton/DAG)
-> REALIZE (proven realizer, sentence -> passage, each section faithful)
-> COHERE (document-level flow / transitions, not stitched sentences)
-> EMIT (pluggable SurfaceProjector -> the target surface)
THE SURFACE IS A PARAMETER. ``project(...)`` builds the geometry-carrying
DocumentIR once, then hands it to whichever surface projector the caller named.
Markdown, docx, and midi (music) are all the SAME IR emitted differently. That
is the efferent multimodal projector: geometry -> any surface.
"""
from __future__ import annotations
import os
import sys
_HERE = os.path.dirname(os.path.abspath(__file__))
sys.path.insert(0, _HERE)
sys.path.insert(0, os.path.join(_HERE, "projectors"))
from cohere import cohere_document # noqa: E402
from document_ir import DocumentIR # noqa: E402
from geometry import Region, load_region # noqa: E402
from plan import plan_document # noqa: E402
from realize import realize_document # noqa: E402
# registering the projectors (import for side-effect: each self-registers)
import projectors.markdown # noqa: E402,F401
import projectors.docx # noqa: E402,F401
import projectors.midi # noqa: E402,F401
import projectors.seams # noqa: E402,F401
from projectors.base import available_surfaces, get_projector # noqa: E402
def build_ir(seed_terms, *, title: str, subtitle: str = "",
format_spec: dict | None = None,
region: Region | None = None,
max_sections: int = 8, conf_floor: float = 0.55) -> DocumentIR:
"""geometry -> PLAN -> REALIZE -> COHERE = the surface-neutral DocumentIR."""
region = region or load_region(seed_terms)
doc = plan_document(region, title=title, subtitle=subtitle,
format_spec=format_spec or {},
conf_floor=conf_floor, max_sections=max_sections)
doc = realize_document(doc)
doc = cohere_document(doc)
return doc
def emit(doc: DocumentIR, surface: str) -> bytes:
"""EMIT: project the built IR onto one surface (surface = a parameter)."""
return get_projector(surface).project(doc)
def project(seed_terms, *, surface: str, title: str, subtitle: str = "",
format_spec: dict | None = None, region: Region | None = None,
max_sections: int = 8) -> tuple[DocumentIR, bytes]:
"""The full efferent projection: geometry + surface -> (IR, bytes)."""
doc = build_ir(seed_terms, title=title, subtitle=subtitle,
format_spec=format_spec, region=region,
max_sections=max_sections)
return doc, emit(doc, surface)
__all__ = ["build_ir", "emit", "project", "available_surfaces",
"get_projector", "load_region", "DocumentIR"]
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"""plan.py — PLAN stage: geometry region -> document skeleton (a DAG/outline).
The manifold becomes the skeleton. We extract faithful propositions from the
region's nodes (the proven neuron-talk extractor, SACRED polarity preserved),
apply a quality floor, then GROUP them into sections. Grouping is by source
node — each engram node is one coherent topic, so one salient node becomes one
section. The section ORDER is the node ranking (importance/salience): the
geometry decides the outline, not a template.
Output: a DocumentIR whose sections carry seed node ids and empty blocks. REALIZE
fills the blocks; the plan owns the structure.
"""
from __future__ import annotations
import os
import re
import sys
_NT = os.path.expanduser("~/Desktop/neuron-talk")
_LR = os.path.expanduser("~/Desktop/lang-realizers")
for _p in (_NT, _LR):
if _p not in sys.path:
sys.path.insert(0, _p)
import propositions # noqa: E402 (the proven, faithful extractor)
from document_ir import DocumentIR, Section # noqa: E402
from geometry import Region # noqa: E402
# --------------------------------------------------------------------------- #
# Proposition quality — keep only clean, well-grounded claims.
# --------------------------------------------------------------------------- #
_JUNK_RE = re.compile(r"[.][a-z]{1,3}\b|[^A-Za-z0-9 '\-]") # ".o", stray symbols
def _has_banner_token(s: str) -> bool:
"""True if any word is an ALLCAPS banner token (DHARMA, ENGRAM, MEASURED)."""
for w in (s or "").split():
core = w.strip(".,:;'\"-")
if len(core) > 2 and core.isupper():
return True
return False
def _clean_prop(p, floor: float) -> bool:
if p.confidence < floor:
return False
if not p.subject or not (p.object or (p.obj_np is not None)):
return False
subj = (p.subject or "").strip()
obj = (p.object or "").strip()
if len(subj) < 2:
return False
# banner-derived shouty fragments read as garbage in prose
if _has_banner_token(subj) or _has_banner_token(obj):
return False
if propositions._is_shouty(p.sentence or ""):
return False
# junk tokens: file-extension fragments (".o"), stray non-word symbols
if _JUNK_RE.search(subj) or _JUNK_RE.search(obj):
return False
# a proposition whose object repeats the subject is usually a parse artifact
if obj and subj.lower() == obj.lower():
return False
# a bare copula with no real complement ("X is it") reads as noise
if p.predicate == "be" and obj.lower() in ("it", "no", "nothing", "empty", ""):
return False
return True
def _dedup(props):
"""Drop duplicate claims. Two axes: (a) identical (pred,obj,polarity), and
(b) same (subject,predicate) — which collapses a mis-split compound like
"detection is post-hoc eval" -> "Detection is post/hoc/eval" into one claim
(keep the highest-confidence surface)."""
props = sorted(props, key=lambda p: p.confidence, reverse=True)
seen_po, seen_sp, out = set(), set(), []
for p in props:
subj = (p.subject or "").lower()
po = (p.predicate, (p.object or "").lower(), p.polarity)
sp = (subj, p.predicate, p.polarity)
if po in seen_po or sp in seen_sp:
continue
seen_po.add(po)
seen_sp.add(sp)
out.append(p)
return out
# --------------------------------------------------------------------------- #
# Heading derivation — a clean human heading from a node.
# --------------------------------------------------------------------------- #
_HEADING_RE = re.compile(r"^\s*#{1,4}\s+(.{2,70})\s*$", re.M)
# node-type / system labels that are NOT topical headings
_NONTOPIC_LABEL = re.compile(r"^(memory|node|knowledge|doc|session)[:/]", re.I)
def _titlecase_banner(s: str) -> str:
"""A shouty banner ("CHRONOCEPTION — SCALE-INVARIANCE") makes a fine title
once Title-cased. Keep short acronyms uppercase."""
def fix(w):
core = w.strip("—-:,.")
if len(core) <= 3 and core.isupper():
return w # acronym
return w.capitalize()
return " ".join(fix(w) for w in s.split())
def _clean_heading(text: str) -> str | None:
"""First line only, no markdown, capped, banner Title-cased. None if unusable."""
if not text:
return None
line = text.strip().splitlines()[0]
line = re.sub(r"^#+\s*", "", line).strip().strip("#").strip()
# cut at a natural break so a long banner heading stays a heading, not a para
for sep in ("", " ", ": ", ". "):
if sep in line and len(line) > 48:
line = line.split(sep)[0].strip()
break
if not (3 <= len(line) <= 64):
return None
if propositions._is_shouty(line):
line = _titlecase_banner(line)
return line or None
def _heading_for(node: dict, fallback: str) -> str:
label = (node.get("label") or "").strip()
content = node.get("content") or ""
candidates: list[str] = []
# a node-type label ("memory:remembered") is never a topic — skip it
if label and not _NONTOPIC_LABEL.match(label):
candidates.append(label)
m = _HEADING_RE.search(content)
if m:
candidates.append(m.group(1))
# the leading banner/first sentence of the content is often the real title
first = re.split(r"(?<=[.\n])", content.strip(), maxsplit=1)[0] if content.strip() else ""
candidates.append(first)
for c in candidates:
h = _clean_heading(c)
if h:
return h
return fallback
def plan_document(region: Region, *, title: str, subtitle: str = "",
format_spec: dict | None = None,
conf_floor: float = 0.55,
max_sections: int = 8,
max_claims_per_section: int = 6) -> DocumentIR:
"""Region -> DocumentIR skeleton. The geometry dictates the outline."""
format_spec = format_spec or {}
doc = DocumentIR(title=title, subtitle=subtitle,
seed_id=region.nodes[0]["id"] if region.nodes else None,
format_spec=format_spec)
made = 0
seen_headings: set[str] = set()
for node in region.nodes:
if made >= max_sections:
break
props = propositions.extract(node.get("content") or "",
node_id=node.get("id"),
node_importance=float(node.get("importance") or 0.0),
max_sentences=10)
props = [p for p in props if _clean_prop(p, conf_floor)]
props = _dedup(props)
props.sort(key=lambda p: p.confidence, reverse=True)
props = props[:max_claims_per_section]
if not props:
continue
heading = _heading_for(node, fallback=f"Region {made + 1}")
# cross-section dedup: a topic appears once. Distinguish by top claim
# subject, else drop the collision so the outline stays clean.
if heading.lower() in seen_headings:
subj = (props[0].subject or "").strip().title()
alt = f"{heading}: {subj}" if subj and subj.lower() not in heading.lower() else None
if alt and alt.lower() not in seen_headings and len(alt) <= 64:
heading = alt
else:
continue
seen_headings.add(heading.lower())
sec = Section(heading=heading, level=2, seed_ids=[node["id"]])
# stash the planned propositions on the section for REALIZE
sec.__dict__["_planned_props"] = props
sec.__dict__["_node"] = node
doc.sections.append(sec)
made += 1
return doc
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"""base.py — the SurfaceProjector interface + registry.
THE key abstraction of the efferent projector: a projector is a pure function
from the surface-neutral, geometry-carrying DocumentIR to bytes on a target
SURFACE. The surface is a PARAMETER. Adding a surface = registering one more
projector; nothing upstream (plan/realize/cohere) changes.
DocumentIR --project--> bytes (per surface)
A TEXT projector reads ``block.sentences``. A NON-TEXT projector (music, image,
video) reads ``block.provenance`` — the geometry the IR carries — and decodes it
onto its surface. Both consume the SAME IR. That symmetry is the whole design:
the realizer generalizes into a multimodal projector, geometry -> any surface.
"""
from __future__ import annotations
from typing import Protocol, runtime_checkable
import sys
import os
sys.path.insert(0, os.path.dirname(os.path.dirname(os.path.abspath(__file__))))
from document_ir import DocumentIR # noqa: E402
@runtime_checkable
class SurfaceProjector(Protocol):
"""Geometry-document -> one surface. Implementations MUST be pure & faithful.
THE ONE SHARED SEAM. Every surface — text, music, image, video — conforms to
this single contract:
project(frame: DocumentIR) -> bytes
where ``frame`` is the geometry-carrying meaning-geometry (the SemFrame at
document scale; a single utterance is the degenerate one-section frame).
RECOMMENDED INTERNAL SHAPE (the peer music/text decomposition, blessed here
so all surfaces share it): a projector may split ``project`` into
spec = self.plan(frame) # meaning-geometry -> surface-specific spec
bytes = self.realize(spec) # spec -> surface, via this projector's PROFILE
``project`` is then ``realize(plan(frame))``. The PROFILE (a text lang-profile,
a music instr/mode-profile, an image layout-profile) is a property of the
projector instance — the pluggable knob. See :class:`TwoStageProjector`.
A TEXT projector's plan reads ``frame`` sentences; a MUSIC/IMAGE projector's
plan reads ``frame.all_provenance()`` — the geometry — and derives its spec
(pitch/harmony/rhythm, or layout) FROM the meaning, deterministically. Same
frame, different profile.
"""
surface: str # "markdown" | "docx" | "midi" | "audio" | "image" | "video"
media_type: str # MIME type of the emitted bytes
ext: str # file extension (no dot)
modality: str # "text" | "audio" | "image" | "video"
profile: object # the pluggable per-surface profile (may be None)
def project(self, doc: DocumentIR) -> bytes:
"""Emit the document on this surface. Returns raw bytes."""
...
class TwoStageProjector:
"""Optional base for the peer plan()/realize() decomposition.
Subclasses implement ``plan(frame) -> spec`` and ``realize(spec) -> bytes``;
``project`` is their composition. This is exactly the peer music interface
(spec = plan(frame, profile); surface = realize(spec, profile)) expressed so
that it still satisfies the single ``SurfaceProjector.project`` seam. Text,
music, and image projectors can all subclass this and remain interchangeable.
"""
surface: str = ""
media_type: str = ""
ext: str = ""
modality: str = ""
profile: object = None
def plan(self, doc: DocumentIR): # -> spec
raise NotImplementedError
def realize(self, spec) -> bytes:
raise NotImplementedError
def project(self, doc: DocumentIR) -> bytes:
return self.realize(self.plan(doc))
_REGISTRY: dict[str, SurfaceProjector] = {}
def register(projector: SurfaceProjector) -> SurfaceProjector:
_REGISTRY[projector.surface] = projector
return projector
def get_projector(surface: str) -> SurfaceProjector:
if surface not in _REGISTRY:
raise KeyError(f"no projector registered for surface {surface!r}; "
f"have {sorted(_REGISTRY)}")
return _REGISTRY[surface]
def available_surfaces() -> list[str]:
return sorted(_REGISTRY)
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"""docx.py — the .docx surface projector: an OWN minimal OOXML emitter.
Own-the-core: a .docx is just a ZIP of a few XML parts (WordprocessingML). We
emit it with the standard library only — ``zipfile`` + string XML — no
python-docx, no external dependency. This proves a "richer structured format"
surface without importing anyone else's toolkit.
Parts emitted (the minimal valid set + a styles part for real headings):
[Content_Types].xml
_rels/.rels
word/_rels/document.xml.rels
word/styles.xml (Title / Heading1 / Heading2 / Normal)
word/document.xml (the content)
Like the markdown projector it reads only the IR's realized sentences; it
invents nothing. The surface differs, the faithful content does not.
"""
from __future__ import annotations
import io
import os
import sys
import zipfile
from xml.sax.saxutils import escape
sys.path.insert(0, os.path.dirname(os.path.dirname(os.path.abspath(__file__))))
from document_ir import DocumentIR # noqa: E402
from projectors.base import register # noqa: E402
_CONTENT_TYPES = """<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<Types xmlns="http://schemas.openxmlformats.org/package/2006/content-types">
<Default Extension="rels" ContentType="application/vnd.openxmlformats-package.relationships+xml"/>
<Default Extension="xml" ContentType="application/xml"/>
<Override PartName="/word/document.xml" ContentType="application/vnd.openxmlformats-officedocument.wordprocessingml.document.main+xml"/>
<Override PartName="/word/styles.xml" ContentType="application/vnd.openxmlformats-officedocument.wordprocessingml.styles+xml"/>
</Types>"""
_RELS = """<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<Relationships xmlns="http://schemas.openxmlformats.org/package/2006/relationships">
<Relationship Id="rId1" Type="http://schemas.openxmlformats.org/officeDocument/2006/relationships/officeDocument" Target="word/document.xml"/>
</Relationships>"""
_DOC_RELS = """<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<Relationships xmlns="http://schemas.openxmlformats.org/package/2006/relationships">
<Relationship Id="rId1" Type="http://schemas.openxmlformats.org/officeDocument/2006/relationships/styles" Target="styles.xml"/>
</Relationships>"""
_W = "http://schemas.openxmlformats.org/wordprocessingml/2006/main"
_STYLES = f"""<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<w:styles xmlns:w="{_W}">
<w:style w:type="paragraph" w:default="1" w:styleId="Normal"><w:name w:val="Normal"/>
<w:rPr><w:sz w:val="22"/></w:rPr></w:style>
<w:style w:type="paragraph" w:styleId="Title"><w:name w:val="Title"/>
<w:pPr><w:spacing w:after="240"/></w:pPr>
<w:rPr><w:b/><w:sz w:val="52"/></w:rPr></w:style>
<w:style w:type="paragraph" w:styleId="Subtitle"><w:name w:val="Subtitle"/>
<w:rPr><w:i/><w:sz w:val="28"/><w:color w:val="555555"/></w:rPr></w:style>
<w:style w:type="paragraph" w:styleId="Heading1"><w:name w:val="heading 1"/>
<w:pPr><w:spacing w:before="240" w:after="120"/><w:outlineLvl w:val="0"/></w:pPr>
<w:rPr><w:b/><w:sz w:val="34"/></w:rPr></w:style>
<w:style w:type="paragraph" w:styleId="Heading2"><w:name w:val="heading 2"/>
<w:pPr><w:spacing w:before="200" w:after="100"/><w:outlineLvl w:val="1"/></w:pPr>
<w:rPr><w:b/><w:sz w:val="28"/></w:rPr></w:style>
</w:styles>"""
def _para(text: str, style: str | None = None) -> str:
ppr = f"<w:pPr><w:pStyle w:val=\"{style}\"/></w:pPr>" if style else ""
return (f"<w:p>{ppr}<w:r><w:t xml:space=\"preserve\">"
f"{escape(text)}</w:t></w:r></w:p>")
class DocxProjector:
surface = "docx"
media_type = ("application/vnd.openxmlformats-officedocument."
"wordprocessingml.document")
ext = "docx"
modality = "text"
def _document_xml(self, doc: DocumentIR) -> str:
body: list[str] = [_para(doc.title, "Title")]
if doc.subtitle:
body.append(_para(doc.subtitle, "Subtitle"))
abstract = doc.meta.get("abstract")
if abstract is not None and abstract.sentences:
body.append(_para(abstract.text()))
for sec in doc.sections:
style = "Heading1" if sec.level <= 1 else "Heading2"
body.append(_para(sec.heading, style))
for block in sec.blocks:
t = block.text()
if t:
body.append(_para(t))
return (f"<?xml version=\"1.0\" encoding=\"UTF-8\" standalone=\"yes\"?>"
f"<w:document xmlns:w=\"{_W}\"><w:body>"
+ "".join(body)
+ "<w:sectPr><w:pgSz w:w=\"12240\" w:h=\"15840\"/>"
"<w:pgMar w:top=\"1440\" w:right=\"1440\" w:bottom=\"1440\" "
"w:left=\"1440\"/></w:sectPr></w:body></w:document>")
def project(self, doc: DocumentIR) -> bytes:
buf = io.BytesIO()
with zipfile.ZipFile(buf, "w", zipfile.ZIP_DEFLATED) as z:
z.writestr("[Content_Types].xml", _CONTENT_TYPES)
z.writestr("_rels/.rels", _RELS)
z.writestr("word/_rels/document.xml.rels", _DOC_RELS)
z.writestr("word/styles.xml", _STYLES)
z.writestr("word/document.xml", self._document_xml(doc))
return buf.getvalue()
register(DocxProjector())
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"""markdown.py — the Markdown surface projector (text facet).
The most tractable surface, and the reference implementation: reads the IR's
realized sentences and lays them out as Markdown. Introduces no content — it is
pure typography over the faithful text the realizer produced.
"""
from __future__ import annotations
import os
import sys
sys.path.insert(0, os.path.dirname(os.path.dirname(os.path.abspath(__file__))))
from document_ir import DocumentIR # noqa: E402
from projectors.base import register # noqa: E402
class MarkdownProjector:
surface = "markdown"
media_type = "text/markdown"
ext = "md"
modality = "text"
def render_str(self, doc: DocumentIR) -> str:
lines: list[str] = [f"# {doc.title}"]
if doc.subtitle:
lines.append(f"\n*{doc.subtitle}*")
abstract = doc.meta.get("abstract")
if abstract is not None and abstract.sentences:
lines.append("")
lines.append(abstract.text())
for sec in doc.sections:
lines.append("")
lines.append(f"{'#' * max(2, sec.level)} {sec.heading}")
for block in sec.blocks:
body = block.text()
if body:
lines.append("")
lines.append(body)
return "\n".join(lines) + "\n"
def project(self, doc: DocumentIR) -> bytes:
return self.render_str(doc).encode("utf-8")
register(MarkdownProjector())
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"""midi.py — the MUSIC surface projector: geometry -> symbolic music (MIDI).
The first NON-TEXT surface, and the proof of the general shape. "Music is
language and it is math" (Will): symbolic music is tractable and geometry-native,
so it is the natural efferent twin to try first after text.
CRUCIALLY this projector does NOT read the realized sentences. It reads the IR's
GEOMETRY facet — ``block.provenance`` — and DECODES each edge onto a musical
surface. That is the whole thesis of the multimodal projector: the same
geometry-carrying IR drives text AND music; a text projector reads the words, a
music projector reads the meaning-geometry. The mapping is deterministic and
faithful to the geometry's structure:
relation lemma -> scale degree (same relation -> same pitch class;
meaning has a consistent sonic form)
polarity -> mode (aff = major third above; neg = minor
third / lowered — SACRED polarity is
audible, a negated edge sounds negated)
confidence -> note duration (stronger grounding rings longer)
importance -> velocity (more important source = louder)
section -> phrase + register shift (structure becomes musical form)
Own-the-core: a Standard MIDI File is a header chunk + a track chunk of
delta-timed events. We emit the raw bytes with ``struct`` — no external MIDI
library. Format 0, one track.
"""
from __future__ import annotations
import io
import os
import struct
import sys
sys.path.insert(0, os.path.dirname(os.path.dirname(os.path.abspath(__file__))))
from document_ir import DocumentIR, Provenance # noqa: E402
from projectors.base import TwoStageProjector, register # noqa: E402
_TICKS = 480 # ticks per quarter note
_C_MAJOR = [0, 2, 4, 5, 7, 9, 11] # semitone offsets of a diatonic scale
def _vlq(n: int) -> bytes:
"""MIDI variable-length quantity encoding of a delta time."""
if n == 0:
return b"\x00"
out = bytearray()
out.append(n & 0x7F)
n >>= 7
while n:
out.insert(0, (n & 0x7F) | 0x80)
n >>= 7
return bytes(out)
def _degree_for(relation: str) -> int:
"""Stable scale degree for a relation lemma (same relation -> same pitch)."""
if not relation:
return 0
return sum(ord(c) for c in relation.lower()) % len(_C_MAJOR)
def _note_for(p: Provenance, base: int) -> tuple[int, int, int]:
"""(pitch, velocity, duration_ticks) for one geometry edge."""
root = base + _C_MAJOR[_degree_for(p.relation)]
# polarity -> mode: affirmed edges take the bright major third, negated edges
# take the darker minor third. The negation is AUDIBLE and never dropped.
third = 4 if p.polarity == "aff" else 3
pitch = max(24, min(96, root + (third if p.confidence >= 0.5 else 0)))
velocity = int(56 + 60 * min(1.0, max(0.0, p.importance)))
velocity = max(40, min(120, velocity))
# confidence -> duration: quarter .. dotted-half
dur = int(_TICKS * (0.5 + 1.5 * min(1.0, max(0.0, p.confidence))))
return pitch, velocity, dur
# a mode-profile: the pluggable musical knob (the peer's mode_profile). Scale +
# tempo. Swapping this profile re-voices the SAME geometry — surface as parameter.
_DEFAULT_PROFILE = {"scale": _C_MAJOR, "tempo_us": 500000,
"registers": [60, 55, 64, 50, 67, 48], "program": 0}
class MidiProjector(TwoStageProjector):
"""geometry -> symbolic music, in the shared two-stage shape.
``plan(frame)`` -> a music_spec: an ordered list of note dicts derived
deterministically from the frame's provenance geometry
(the peer's ``plan(frame, profile) -> spec``).
``realize(spec)`` -> Standard MIDI File bytes (the peer's
``realize(spec, profile) -> surface``; here the surface
is symbolic MIDI, the minimal audio proof — a richer
additive-synth audio projector conforms identically).
"""
surface = "midi"
media_type = "audio/midi"
ext = "mid"
modality = "audio"
def __init__(self, profile: dict | None = None):
self.profile = profile or _DEFAULT_PROFILE
# -- stage 1: meaning-geometry -> music_spec (reads the GEOMETRY facet) -- #
def plan(self, doc: DocumentIR) -> list[dict]:
registers = self.profile["registers"]
spec: list[dict] = []
for si, sec in enumerate(doc.sections):
base = registers[si % len(registers)]
provs = [p for p in sec.all_provenance()
if p.kind in ("fact", "interpretation")]
for i, p in enumerate(provs):
pitch, vel, dur = _note_for(p, base)
spec.append({"pitch": pitch, "velocity": vel, "dur": dur,
"rest_before": (_TICKS // 2) if (si > 0 and i == 0) else 0,
"relation": p.relation, "polarity": p.polarity})
return spec
# -- stage 2: music_spec -> MIDI bytes (own-core, no library) ------------ #
def realize(self, spec: list[dict]) -> bytes:
ev = bytearray()
ev += _vlq(0) + b"\xFF\x51\x03" + struct.pack(">I", self.profile["tempo_us"])[1:]
ev += _vlq(0) + bytes([0xC0, self.profile["program"] & 0x7F])
for note in spec:
ev += _vlq(note["rest_before"]) + bytes([0x90, note["pitch"], note["velocity"]])
ev += _vlq(note["dur"]) + bytes([0x80, note["pitch"], 0])
ev += _vlq(0) + b"\xFF\x2F\x00"
track = bytes(ev)
buf = io.BytesIO()
buf.write(b"MThd" + struct.pack(">IHHH", 6, 0, 1, _TICKS))
buf.write(b"MTrk" + struct.pack(">I", len(track)) + track)
return buf.getvalue()
register(MidiProjector())
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"""seams.py — documented efferent seams for IMAGE and VIDEO surfaces.
These are NOT implemented (per the build rails: architect, do not overbuild).
They are registered as first-class seams so the interface PROVES it accepts
future non-text projectors without any upstream change. Each documents exactly
what its decoder would read from the geometry-carrying IR, making the multimodal
generalization concrete rather than hand-wavy.
The symmetry that guarantees these are possible, not moonshots: they are the
efferent twins of multimodal INGEST. If meaning can HOLD an image (ingest as
first-class geometry), meaning can PROJECT one back. Video = image x sound x
TIME, and the engram already stores time (chronoception). So video falls out of
an image projector + the music projector + the stored temporal ordering.
"""
from __future__ import annotations
import os
import sys
sys.path.insert(0, os.path.dirname(os.path.dirname(os.path.abspath(__file__))))
from document_ir import DocumentIR # noqa: E402
from projectors.base import register # noqa: E402
class _Seam:
"""A registered-but-unimplemented projector. Names its decoder contract."""
def project(self, doc: DocumentIR) -> bytes: # pragma: no cover - seam
raise NotImplementedError(
f"{self.surface!r} projector is a documented seam, not yet built. "
f"Decoder contract: {self.decoder_contract}")
class ImageProjector(_Seam):
surface = "image"
media_type = "image/png"
ext = "png"
modality = "image"
decoder_contract = (
"reads block.provenance as a spatial layout — nodes become regions, edges "
"become adjacencies; salience/importance drive size/contrast; polarity "
"drives figure/ground. The efferent twin of image ingest (a geometry->raster "
"decoder, learned or engineered), exactly mirroring the embedder that turned "
"the image INTO geometry.")
class VideoProjector(_Seam):
surface = "video"
media_type = "video/mp4"
ext = "mp4"
modality = "video"
decoder_contract = (
"image x sound x TIME. Composes the image projector (per-keyframe geometry "
"layout) with the midi/music projector (score) along the geometry's stored "
"temporal ordering (chronoception). Needs no new principle once image + music "
"exist — only a muxer.")
register(ImageProjector())
register(VideoProjector())
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"""provenance.py — the faithfulness audit + geometry->section trace.
A document projected from geometry is only worth anything if every claim traces
back. This module walks the DocumentIR and proves the discipline held:
* ZERO ungrounded claims (every fact/interpretation has a real node id),
* every emitted sentence maps to a geometry edge (or is a marked connective),
* SACRED polarity survived (negations are reported, never silently dropped),
* COHERE introduced no new geometry (connectives carry no claim).
It emits both a machine verdict and a human-readable geometry->section table.
"""
from __future__ import annotations
from document_ir import DocumentIR
def audit(doc: DocumentIR) -> dict:
provs = doc.all_provenance()
facts = [p for p in provs if p.kind in ("fact", "interpretation")]
connectives = [p for p in provs if p.kind == "connective"]
ungrounded = [p for p in facts if not p.node_id]
negations = [p for p in facts if p.polarity == "neg"]
node_ids = sorted({p.node_id for p in facts if p.node_id})
return {
"claims": len(facts),
"connectives": len(connectives),
"ungrounded_claims": len(ungrounded),
"negations_preserved": len(negations),
"distinct_source_nodes": len(node_ids),
"faithful": len(ungrounded) == 0,
"source_nodes": node_ids,
}
def trace_table(doc: DocumentIR) -> str:
"""Human-readable geometry -> section -> claim provenance table."""
lines = ["# Provenance — every claim traces geometry", ""]
lines.append(f"**Document:** {doc.title}")
a = audit(doc)
lines.append(f"**Claims:** {a['claims']} · **Ungrounded:** "
f"{a['ungrounded_claims']} · **Negations preserved:** "
f"{a['negations_preserved']} · **Source nodes:** "
f"{a['distinct_source_nodes']} · **Faithful:** "
f"{'YES' if a['faithful'] else 'NO'}")
lines.append("")
for si, sec in enumerate(doc.sections, 1):
lines.append(f"## {si}. {sec.heading}")
lines.append(f"_seed nodes: {', '.join(i[:8] for i in sec.seed_ids)}_")
lines.append("")
lines.append("| # | realized claim | traces geometry edge |")
lines.append("|---|----------------|----------------------|")
n = 0
for block in sec.blocks:
for sent, prov in zip(block.sentences, block.provenance):
if prov.kind == "connective":
continue
n += 1
edge = prov.trace().replace("|", "\\|")
s = sent.replace("|", "\\|")
lines.append(f"| {n} | {s} | {edge} |")
lines.append("")
return "\n".join(lines) + "\n"
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"""realize.py — REALIZE stage: fill each planned section with faithful passages.
Scales the PROVEN realizer from a single assertion to a passage. For each
planned proposition we build a realizer-ready clause (the proven
``_prop_to_clause`` mapping) and run it through the proven engine
(``engine.realize``), which is a deterministic grammar with the SACRED negation
contract — it never invents. Each realized sentence is paired with a
:class:`Provenance` that pins it to the exact geometry edge it came from.
"Passage, not a list of sentences": within a section we lightly vary sentence
openings and group related claims, but we add NO content the geometry did not
assert. The only non-geometry words are function words the grammar already owns
(articles, "and", conjunction of same-subject claims). Document-level flow is
COHERE's job; this stage owns intra-section fluency + fidelity.
"""
from __future__ import annotations
import os
import sys
_NT = os.path.expanduser("~/Desktop/neuron-talk")
_LR = os.path.expanduser("~/Desktop/lang-realizers")
for _p in (_NT, _LR):
if _p not in sys.path:
sys.path.insert(0, _p)
import engine # noqa: E402 (the proven no-LLM realizer)
from dialogue import _prop_to_clause # noqa: E402 (proven prop -> clause)
from document_ir import Block, DocumentIR, Provenance, Section # noqa: E402
def _provenance_from(p, kind: str = "fact") -> Provenance:
return Provenance(
subj_id=p.source_node_id, subject=p.subject, relation=p.predicate,
obj=p.object, polarity=p.polarity, confidence=round(float(p.confidence), 3),
node_id=p.source_node_id, kind=kind,
importance=float(getattr(p, "node_importance", 0.0) or 0.0),
salience=0.0,
)
import re as _re
# a well-formed declarative opens with a determiner, a proper noun, "I", or a
# capitalized head — not a mis-parsed object pronoun or a copula fragment.
_BAD_OPENERS = _re.compile(r"^(Me |It is I|There is|This is it|That is it)\b")
_VACUOUS = _re.compile(r"^\w+ (is|are|was|were) (it|no|nothing|empty|those|this|that)\.?$",
_re.I)
def _good_sentence(text: str) -> bool:
"""Fluency gate — drops degenerate realizations. NEVER loosens faithfulness;
it only refuses to SPEAK a claim whose surface came out malformed."""
words = text.rstrip(".").split()
if len(words) < 3:
return False
if _BAD_OPENERS.search(text):
return False
if _VACUOUS.match(text):
return False
# a sentence that is mostly one-letter/two-letter tokens is a parse artifact
short = sum(1 for w in words if len(w.strip(".,'")) <= 2)
if short > len(words) / 2:
return False
return True
def _realize_prop(p, lang: str = "en") -> tuple[str, Provenance] | None:
"""One proposition -> (faithful sentence, provenance) or None if it drops."""
clause = _prop_to_clause(p)
text = engine.realize(clause, lang)
if not text or not text.strip():
return None
text = text.strip()
if not text.endswith((".", "!", "?")):
text += "."
# capitalize first character (proper nouns / "I" already handled by grammar)
text = text[0].upper() + text[1:]
if not _good_sentence(text):
return None
return text, _provenance_from(p)
def realize_document(doc: DocumentIR, lang: str = "en") -> DocumentIR:
"""Fill every planned section's blocks with faithful, realized passages."""
for sec in doc.sections:
planned = sec.__dict__.get("_planned_props", [])
block = Block(role="body")
summary_bits: list[str] = []
for p in planned:
r = _realize_prop(p, lang)
if r is None:
continue
text, prov = r
block.sentences.append(text)
block.provenance.append(prov)
if len(summary_bits) < 1:
# a short grounded gloss for TOC / pptx bullets
obj = (prov.obj or "").strip().rstrip(".")
if obj:
summary_bits.append(obj)
if block.sentences:
sec.blocks.append(block)
sec.summary = summary_bits[0] if summary_bits else ""
# drop the transient planning payload; the IR is now self-contained
sec.__dict__.pop("_planned_props", None)
sec.__dict__.pop("_node", None)
# prune sections that realized to nothing
doc.sections = [s for s in doc.sections if s.blocks]
return doc
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// accent.el - A British-RP ACCENT as an INGESTED TRANSFORM-GEOMETRY, composed
// onto the voice (voice (+) accent, SEPARABLE). Reads elp/data/british-accent.psv
// into an accent MANIFOLD in the engram (override nodes + a shared accent hub),
// and the render reads the RP formant overrides + the non-rhotic rule back from
// that geometry. NO accent targets live in code same discipline as the base
// phonetics. PROVENANCE NOTE: the RP Hz values are PROVISIONAL (reconstructed-
// from-knowledge approximations, cite Deterding1997 / Hawkins&Midgley2005 /
// Wells1982) pending transcription from the published tables the PIPELINE is
// the deliverable; exact values are being source-verified separately.
fn ingest_accent(path: String) -> [String] {
let content: String = fs_read(path)
let lines: [String] = str_split(content, "\n")
let nl: Int = native_list_len(lines)
let amap: [String] = native_list_empty()
let hub: String = engram_node("accent british-rp prov=PROVISIONAL cite=Deterding1997-HawkinsMidgley2005-Wells1982", "Accent", 80)
let li: Int = 0
while li < nl {
let line: String = native_list_get(lines, li)
let ll: Int = str_len(line)
let skip: Int = 0
if ll < 3 {
skip = 1
}
if skip == 0 {
let first: Int = str_char_code(line, 0)
if first == 35 {
skip = 1
}
}
if skip == 0 {
let f: [String] = str_split(line, "|")
let nf: Int = native_list_len(f)
if nf >= 6 {
let key: String = native_list_get(f, 0)
let f1: String = native_list_get(f, 1)
let f2: String = native_list_get(f, 2)
let f3: String = native_list_get(f, 3)
let kind: String = native_list_get(f, 4)
let set: String = native_list_get(f, 5)
let cont: String = "accent british-rp " + key + " f1=" + f1 + " f2=" + f2 + " f3=" + f3 + " kind=" + kind + " set=" + set + " prov=PROVISIONAL cite=Deterding1997-HawkinsMidgley2005-Wells1982"
let id: String = engram_node(cont, "AccentTarget", 80)
amap = native_list_append(amap, key)
amap = native_list_append(amap, cont)
engram_connect(id, hub, 80, "of_accent")
}
}
li = li + 1
}
return amap
}
// RP formant override for a phoneme, read from the accent manifold. Returns
// [f1,f2,f3] for a vowel_override record, or an empty list if none / a rule.
fn accent_formants(amap: [String], code: String) -> [Int] {
let out: [Int] = native_list_empty()
let id: String = sp_map_get(amap, code)
if str_eq(id, "") {
return out
}
let j: String = id
let isrule: Int = str_index_of(j, "drop_coda")
if isrule >= 0 {
return out
}
let f1: Int = parse_uint_from(j, "f1=")
if f1 <= 0 {
return out
}
let out = native_list_append(out, f1)
let out = native_list_append(out, parse_uint_from(j, "f2="))
let out = native_list_append(out, parse_uint_from(j, "f3="))
return out
}
// Is this accent non-rhotic? (reads the R rule node from the manifold)
fn is_nonrhotic(amap: [String]) -> Int {
let id: String = sp_map_get(amap, "R")
if str_eq(id, "") {
return 0
}
let hit: Int = str_index_of(id, "drop_coda")
if hit >= 0 {
return 1
}
return 0
}
// Is this symbol a vowel? Membership in the vowel-set derived from the phonetics
// source's class column (phonological structure the FORMANT NUMBERS still come
// from the organ manifold; this is only the categorical class for the rule).
fn is_vowel_sym(vset: [String], sym: String) -> Int {
let n: Int = native_list_len(vset)
let i: Int = 0
while i < n {
if str_eq(native_list_get(vset, i), sym) {
return 1
}
i = i + 1
}
return 0
}
// Non-rhotic transform: drop a post-vocalic CODA /R/ an R whose next non-SIL
// phoneme is NOT a vowel (a consonant, or end of utterance). Keep INTERVOCALIC/
// onset R (next non-SIL phoneme is a vowel, e.g. the medial R in N UW R AA N).
fn apply_rhoticity(codes: [String], vset: [String]) -> [String] {
let n: Int = native_list_len(codes)
let out: [String] = native_list_empty()
let i: Int = 0
while i < n {
let c: String = native_list_get(codes, i)
let keep: Int = 1
if str_eq(c, "R") {
let jx: Int = i + 1
let nextv: Int = 0
while jx < n {
let ncode: String = native_list_get(codes, jx)
if str_eq(ncode, "SIL") {
jx = jx + 1
} else {
nextv = is_vowel_sym(vset, ncode)
jx = n + 1000
}
}
if nextv == 0 {
keep = 0
}
}
if keep == 1 {
out = native_list_append(out, c)
}
i = i + 1
}
return out
}
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// audio-demo.el - Drive the native audio surface: render a tone per instrument
// from its LEARNED signature, then render a small meaning-phrase "piece".
// Entry point: top-level statement calls main() (same convention as the
// examples' top-level println(run_test())).
fn micros_to_str(xs: [Int]) -> String {
let n: Int = native_list_len(xs)
let out: String = ""
let i: Int = 0
while i < n {
if i > 0 { let out: String = out + "," }
let out: String = out + int_to_str(native_list_get(xs, i))
let i: Int = i + 1
}
return out
}
// Render a 1.0s A4 (midi 69) tone from a signature file, print the parsed
// partials (proving the numbers came from the engram .sig), write the WAV.
fn render_tone(name: String, sigpath: String, outpath: String, table: [Int]) -> Int {
let lines: [String] = sig_load(sigpath)
let partials: [Int] = parse_micros(sig_field(lines, "partials"))
println("[" + name + "] partials_n=" + sig_field(lines, "partials_n") + " parsed_partials_micro(scale 1e6)=" + micros_to_str(partials))
println("[" + name + "] raw partials line from .sig = " + sig_field(lines, "partials"))
let freq: Int = freq_of_midi(69)
let note: [Int] = synth_from_sig(lines, freq, 1000, 900, 44100, table)
let n: Int = native_list_len(note)
let ok: Int = wav_write(outpath, note, n, 44100)
println("[" + name + "] rendered " + int_to_str(n) + " samples -> " + outpath + " (write_ok=" + int_to_str(ok) + ")")
return n
}
fn run_demo() -> Int {
let table: [Int] = sin_table()
fs_mkdir("/Users/will/Development/neuron-technologies/foundation/el/.claude/worktrees/agent-aaf04b0a9714c4070/elp/faculty/out")
println("=== TONES: render A4 (midi 69) from each learned signature ===")
render_tone("flute", "/Users/will/Development/neuron-technologies/foundation/el/.claude/worktrees/agent-aaf04b0a9714c4070/elp/faculty/sig/flute.sig", "/Users/will/Development/neuron-technologies/foundation/el/.claude/worktrees/agent-aaf04b0a9714c4070/elp/faculty/out/tone-flute.wav", table)
render_tone("clarinet", "/Users/will/Development/neuron-technologies/foundation/el/.claude/worktrees/agent-aaf04b0a9714c4070/elp/faculty/sig/clarinet.sig", "/Users/will/Development/neuron-technologies/foundation/el/.claude/worktrees/agent-aaf04b0a9714c4070/elp/faculty/out/tone-clarinet.wav", table)
render_tone("violin", "/Users/will/Development/neuron-technologies/foundation/el/.claude/worktrees/agent-aaf04b0a9714c4070/elp/faculty/sig/violin.sig", "/Users/will/Development/neuron-technologies/foundation/el/.claude/worktrees/agent-aaf04b0a9714c4070/elp/faculty/out/tone-violin.wav", table)
render_tone("piano", "/Users/will/Development/neuron-technologies/foundation/el/.claude/worktrees/agent-aaf04b0a9714c4070/elp/faculty/sig/piano.sig", "/Users/will/Development/neuron-technologies/foundation/el/.claude/worktrees/agent-aaf04b0a9714c4070/elp/faculty/out/tone-piano.wav", table)
render_tone("organ", "/Users/will/Development/neuron-technologies/foundation/el/.claude/worktrees/agent-aaf04b0a9714c4070/elp/faculty/sig/organ.sig", "/Users/will/Development/neuron-technologies/foundation/el/.claude/worktrees/agent-aaf04b0a9714c4070/elp/faculty/out/tone-organ.wav", table)
println("")
println("=== PIECE: a 6-frame meaning phrase (incl. a NEG frame) ===")
let frames: [[String]] = native_list_empty()
let frames: [[String]] = native_list_append(frames, audio_frame("agent", "aff", "0.9", "0.8", "0", "s1"))
let frames: [[String]] = native_list_append(frames, audio_frame("theme", "aff", "0.7", "0.6", "0", "s2"))
let frames: [[String]] = native_list_append(frames, audio_frame("cause", "aff", "0.8", "0.9", "1", "s3"))
let frames: [[String]] = native_list_append(frames, audio_frame("negation", "neg", "0.85", "0.7", "0", "s4"))
let frames: [[String]] = native_list_append(frames, audio_frame("goal", "aff", "0.6", "0.5", "1", "s5"))
let frames: [[String]] = native_list_append(frames, audio_frame("result", "aff", "0.95", "1.0", "0", "s6"))
// Print the plan so the NEG frame's minor third (+3) vs major (+4) is visible.
let nf: Int = native_list_len(frames)
let fi: Int = 0
while fi < nf {
let frame: [String] = native_list_get(frames, fi)
let plan: [Int] = plan_note(frame)
let pol: String = surface_get(frame, "polarity")
let third_name: String = "major(+4)"
if str_eq(pol, "neg") { let third_name: String = "MINOR(+3)" }
println("frame " + int_to_str(fi) + " relation=" + surface_get(frame, "relation") + " polarity=" + pol + " -> midi=" + int_to_str(native_list_get(plan, 0)) + " dur_ms=" + int_to_str(native_list_get(plan, 1)) + " amp_pm=" + int_to_str(native_list_get(plan, 2)) + " third=" + third_name)
let fi: Int = fi + 1
}
let piano_lines: [String] = sig_load("/Users/will/Development/neuron-technologies/foundation/el/.claude/worktrees/agent-aaf04b0a9714c4070/elp/faculty/sig/piano.sig")
let total: Int = realize_audio(frames, piano_lines, "/Users/will/Development/neuron-technologies/foundation/el/.claude/worktrees/agent-aaf04b0a9714c4070/elp/faculty/out/piece.wav", 44100, table)
println("PIECE rendered " + int_to_str(total) + " samples -> /Users/will/Development/neuron-technologies/foundation/el/.claude/worktrees/agent-aaf04b0a9714c4070/elp/faculty/out/piece.wav")
return total
}
println("audio-demo main returned samples=" + int_to_str(run_demo()))
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// audio-surface.el - Native own-core additive-synthesis audio surface.
//
// The AUDIO efferent seam, native, no Python and no library. This renders real
// PCM .wav bytes from instrument SIGNATURES read from engram-sourced .sig data
// files (elp/faculty/sig/*.sig) - the partial amplitudes are NEVER literals in
// this source; they are parsed from the learned signature at run time. That is
// the whole proof: render-from-learned-signatures.
//
// EL has no float arithmetic operator (codegen emits raw int64 ops for + - * /
// on the shared 64-bit slot) and no float-arithmetic natives - so ALL synthesis
// math here is own-core INTEGER fixed-point. Angles use a quarter-wave sine
// table (scale 10000) from a fixed-point Taylor series; amplitudes are parsed to
// micro (scale 1e6) straight from the .sig text; frequencies are milliHz ints.
//
// Pipeline mirrors the two-stage projector (midi.py): plan_note(frame) reads a
// frame's meaning-geometry slot-map and derives (pitch, duration, amplitude);
// realize_audio SUPERPOSES the signature's partials (the compose op) and
// serialises RIFF/WAVE. Same frame -> midi OR audio.
// -- integer decimal + string helpers -----------------------------------------
fn str_to_int_el(s: String) -> Int {
let n: Int = str_len(s)
let i: Int = 0
let v: Int = 0
let neg: Bool = false
while i < n {
let c: Int = str_char_code(s, i)
if c == 45 { let neg: Bool = true }
if c >= 48 {
if c < 58 {
let v: Int = v * 10 + (c - 48)
}
}
let i: Int = i + 1
}
if neg { return 0 - v }
return v
}
fn parse_micro(s: String) -> Int {
let dot: Int = str_index_of(s, ".")
if dot < 0 {
return str_to_int_el(s) * 1000000
}
let n: Int = str_len(s)
let ipart: String = str_slice(s, 0, dot)
let fpart: String = str_slice(s, dot + 1, n)
let iv: Int = str_to_int_el(ipart)
let fv: Int = 0
let scale: Int = 100000
let fn2: Int = str_len(fpart)
let i: Int = 0
while i < 6 {
let d: Int = 0
if i < fn2 {
let d: Int = str_char_code(fpart, i) - 48
}
let fv: Int = fv + d * scale
let scale: Int = scale / 10
let i: Int = i + 1
}
return iv * 1000000 + fv
}
// -- signature (engram data file) loader ---------------------------------------
fn sig_load(path: String) -> [String] {
let text: String = fs_read(path)
return str_split(text, "\n")
}
fn sig_field(lines: [String], key: String) -> String {
let pref: String = key + ": "
let n: Int = native_list_len(lines)
let plen: Int = str_len(pref)
let i: Int = 0
while i < n {
let ln: String = native_list_get(lines, i)
if str_starts_with(ln, pref) {
return str_slice(ln, plen, str_len(ln))
}
let i: Int = i + 1
}
return ""
}
fn parse_micros(csv: String) -> [Int] {
let parts: [String] = str_split(csv, ",")
let n: Int = native_list_len(parts)
let out: [Int] = native_list_empty()
let i: Int = 0
while i < n {
let out: [Int] = native_list_append(out, parse_micro(native_list_get(parts, i)))
let i: Int = i + 1
}
return out
}
// -- fixed-point sine (own-core, quarter-wave Taylor table, scale 10000) --------
fn sin_table() -> [Int] {
let HP: Int = 1570796
let t: [Int] = native_list_empty()
let q: Int = 0
while q < 257 {
let x: Int = q * HP / 256
let x2: Int = x * x / 1000000
let x3: Int = x2 * x / 1000000
let x5: Int = x3 * x2 / 1000000
let x7: Int = x5 * x2 / 1000000
let x9: Int = x7 * x2 / 1000000
let s: Int = x - x3 / 6 + x5 / 120 - x7 / 5040 + x9 / 362880
let t: [Int] = native_list_append(t, s / 100)
let q: Int = q + 1
}
return t
}
fn sin_lookup(t: [Int], phase: Int) -> Int {
let p: Int = phase % 1024
if p < 0 { let p: Int = p + 1024 }
let quad: Int = p / 256
let r: Int = p % 256
if quad == 0 { return native_list_get(t, r) }
if quad == 1 { return native_list_get(t, 256 - r) }
if quad == 2 { return 0 - native_list_get(t, r) }
return 0 - native_list_get(t, 256 - r)
}
fn isqrt_int(n: Int) -> Int {
if n <= 0 { return 0 }
let x: Int = n
let y: Int = (x + 1) / 2
while y < x {
let x: Int = y
let y: Int = (x + n / x) / 2
}
return x
}
// freq_of_midi: equal-tempered frequency in milliHz. 440000 mHz at midi 69.
fn freq_of_midi(m: Int) -> Int {
let f: Int = 440000
if m > 69 {
let k: Int = m - 69
let i: Int = 0
while i < k {
let f: Int = f * 1059463 / 1000000
let i: Int = i + 1
}
return f
}
if m < 69 {
let k: Int = 69 - m
let i: Int = 0
while i < k {
let f: Int = f * 1000000 / 1059463
let i: Int = i + 1
}
return f
}
return f
}
// -- envelope (ADSR), scale 1000 -----------------------------------------------
fn adsr_env(i: Int, total: Int, atk_n: Int, dec_n: Int, sus_pm: Int, rel_n: Int) -> Int {
if i < atk_n {
if atk_n == 0 { return 1000 }
return 1000 * i / atk_n
}
if i < atk_n + dec_n {
if dec_n == 0 { return sus_pm }
return 1000 - (1000 - sus_pm) * (i - atk_n) / dec_n
}
let rel_start: Int = total - rel_n
if i < rel_start {
return sus_pm
}
if rel_n == 0 { return 0 }
let left: Int = total - i
return sus_pm * left / rel_n
}
// -- note synthesis: SUPERPOSE the learned partials -> [Int] samples -----------
fn note_samples(freq_mHz: Int, dur_ms: Int, rate: Int, partials: [Int], sumP: Int, b_micro: Int, vib_rate: Int, vib_cents: Int, atk_ms: Int, dec_ms: Int, sus_pm: Int, rel_ms: Int, amp_pm: Int, table: [Int]) -> [Int] {
let total: Int = dur_ms * rate / 1000
let atk_n: Int = atk_ms * rate / 1000
let dec_n: Int = dec_ms * rate / 1000
let rel_n: Int = rel_ms * rate / 1000
let np: Int = native_list_len(partials)
let half_mhz: Int = rate * 1000 / 2
let out: [Int] = native_list_empty()
let i: Int = 0
while i < total {
let acc: Int = 0
let k: Int = 0
while k < np {
let harm: Int = k + 1
let amp_k: Int = native_list_get(partials, k)
let factor: Int = 1000000
if b_micro > 0 {
let val: Int = 1000000 + b_micro * harm * harm
let factor: Int = isqrt_int(val * 1000000)
}
let fn_mhz: Int = freq_mHz * harm
let fn_mhz: Int = fn_mhz * factor / 1000000
if vib_cents > 0 {
if vib_rate > 0 {
let vphase: Int = i * vib_rate * 1024 / rate
let vs: Int = sin_lookup(table, vphase)
let vibf: Int = 1000000 + (vib_cents * vs * 833) / 10000
let fn_mhz: Int = fn_mhz * vibf / 1000000
}
}
if fn_mhz <= half_mhz {
let phase: Int = i * fn_mhz * 1024 / (rate * 1000)
let sv: Int = sin_lookup(table, phase)
let acc: Int = acc + sv * amp_k / 1000000
}
let k: Int = k + 1
}
let env: Int = adsr_env(i, total, atk_n, dec_n, sus_pm, rel_n)
let s16: Int = acc * 2800000 / sumP
let s16: Int = s16 * env / 1000
let s16: Int = s16 * amp_pm / 1000
if s16 > 32767 { let s16: Int = 32767 }
if s16 < 0 - 32767 { let s16: Int = 0 - 32767 }
let out: [Int] = native_list_append(out, s16)
let i: Int = i + 1
}
return out
}
fn synth_from_sig(lines: [String], freq_mHz: Int, dur_ms: Int, amp_pm: Int, rate: Int, table: [Int]) -> [Int] {
let partials: [Int] = parse_micros(sig_field(lines, "partials"))
let np: Int = native_list_len(partials)
let sumP: Int = 0
let j: Int = 0
while j < np {
let pj: Int = native_list_get(partials, j)
let sumP: Int = sumP + pj
let j: Int = j + 1
}
if sumP <= 0 { let sumP: Int = 1000000 }
let adsr: [String] = str_split(sig_field(lines, "adsr"), ",")
let atk_ms: Int = parse_micro(native_list_get(adsr, 0)) / 1000
let dec_ms: Int = parse_micro(native_list_get(adsr, 1)) / 1000
let sus_pm: Int = parse_micro(native_list_get(adsr, 2)) / 1000
let rel_ms: Int = parse_micro(native_list_get(adsr, 3)) / 1000
let b_micro: Int = parse_micro(sig_field(lines, "inharmonicity_B"))
let vib_rate: Int = str_to_int_el(sig_field(lines, "vibrato_rate_hz"))
let vib_cents: Int = str_to_int_el(sig_field(lines, "vibrato_depth_cents"))
return note_samples(freq_mHz, dur_ms, rate, partials, sumP, b_micro, vib_rate, vib_cents, atk_ms, dec_ms, sus_pm, rel_ms, amp_pm, table)
}
// -- byte-buffer helpers (own-core, no library) --------------------------------
fn put_tag(buf: String, pos: Int, s: String) -> String {
let n: Int = str_len(s)
let i: Int = 0
while i < n {
let buf: String = __str_set_char(buf, pos + i, str_char_code(s, i))
let i: Int = i + 1
}
return buf
}
fn put_u32le(buf: String, pos: Int, v: Int) -> String {
let buf: String = __str_set_char(buf, pos, v % 256)
let buf: String = __str_set_char(buf, pos + 1, (v / 256) % 256)
let buf: String = __str_set_char(buf, pos + 2, (v / 65536) % 256)
let buf: String = __str_set_char(buf, pos + 3, (v / 16777216) % 256)
return buf
}
fn put_u16le(buf: String, pos: Int, v: Int) -> String {
let buf: String = __str_set_char(buf, pos, v % 256)
let buf: String = __str_set_char(buf, pos + 1, (v / 256) % 256)
return buf
}
// -- WAV serializer: own-core RIFF/WAVE, PCM mono 16-bit -----------------------
fn wav_write(path: String, samples: [Int], n: Int, rate: Int) -> Int {
let data_len: Int = n * 2
let total: Int = 44 + data_len
let buf: String = __str_alloc(total)
let buf: String = put_tag(buf, 0, "RIFF")
let buf: String = put_u32le(buf, 4, 36 + data_len)
let buf: String = put_tag(buf, 8, "WAVE")
let buf: String = put_tag(buf, 12, "fmt ")
let buf: String = put_u32le(buf, 16, 16)
let buf: String = put_u16le(buf, 20, 1)
let buf: String = put_u16le(buf, 22, 1)
let buf: String = put_u32le(buf, 24, rate)
let buf: String = put_u32le(buf, 28, rate * 2)
let buf: String = put_u16le(buf, 32, 2)
let buf: String = put_u16le(buf, 34, 16)
let buf: String = put_tag(buf, 36, "data")
let buf: String = put_u32le(buf, 40, data_len)
let i: Int = 0
while i < n {
let v: Int = native_list_get(samples, i)
if v < 0 { let v: Int = v + 65536 }
let buf: String = __str_set_char(buf, 44 + i * 2, v % 256)
let buf: String = __str_set_char(buf, 44 + i * 2 + 1, (v / 256) % 256)
let i: Int = i + 1
}
let ok: Int = fs_write_bytes(path, buf, total)
return ok
}
// -- plan: frame slot-map -> note atom (pitch, duration, amplitude) ------------
fn audio_frame(relation: String, polarity: String, confidence: String, importance: String, salience: String, subj_id: String) -> [String] {
let f: [String] = native_list_empty()
let f: [String] = native_list_append(f, "relation")
let f: [String] = native_list_append(f, relation)
let f: [String] = native_list_append(f, "polarity")
let f: [String] = native_list_append(f, polarity)
let f: [String] = native_list_append(f, "confidence")
let f: [String] = native_list_append(f, confidence)
let f: [String] = native_list_append(f, "importance")
let f: [String] = native_list_append(f, importance)
let f: [String] = native_list_append(f, "salience")
let f: [String] = native_list_append(f, salience)
let f: [String] = native_list_append(f, "subj_id")
let f: [String] = native_list_append(f, subj_id)
return f
}
fn degree_offset(deg: Int) -> Int {
if deg == 0 { return 0 }
if deg == 1 { return 2 }
if deg == 2 { return 4 }
if deg == 3 { return 5 }
if deg == 4 { return 7 }
if deg == 5 { return 9 }
return 11
}
// returns [midi, dur_ms, amp_pm]
fn plan_note(frame: [String]) -> [Int] {
let relation: String = surface_get(frame, "relation")
let polarity: String = surface_get(frame, "polarity")
let confidence: String = surface_get(frame, "confidence")
let importance: String = surface_get(frame, "importance")
let salience: String = surface_get(frame, "salience")
let rn: Int = str_len(relation)
let csum: Int = 0
let i: Int = 0
while i < rn {
let cc: Int = str_char_code(relation, i)
let csum: Int = csum + cc
let i: Int = i + 1
}
let deg: Int = csum % 7
let third: Int = 4
if str_eq(polarity, "neg") { let third: Int = 3 }
let sal_oct: Int = str_to_int_el(salience)
let doff: Int = degree_offset(deg)
let midi: Int = 60 + sal_oct * 12 + doff + third
let conf_micro: Int = parse_micro(confidence)
let dur_ms: Int = 200 + conf_micro / 1000
let imp_micro: Int = parse_micro(importance)
let amp_pm: Int = 400 + imp_micro / 2000
let out: [Int] = native_list_empty()
let out: [Int] = native_list_append(out, midi)
let out: [Int] = native_list_append(out, dur_ms)
let out: [Int] = native_list_append(out, amp_pm)
return out
}
fn realize_audio(frames: [[String]], sig_lines: [String], path: String, rate: Int, table: [Int]) -> Int {
let nf: Int = native_list_len(frames)
let all: [Int] = native_list_empty()
let count: Int = 0
let fi: Int = 0
while fi < nf {
let frame: [String] = native_list_get(frames, fi)
let plan: [Int] = plan_note(frame)
let midi: Int = native_list_get(plan, 0)
let dur_ms: Int = native_list_get(plan, 1)
let amp_pm: Int = native_list_get(plan, 2)
let freq: Int = freq_of_midi(midi)
let note: [Int] = synth_from_sig(sig_lines, freq, dur_ms, amp_pm, rate, table)
let nn: Int = native_list_len(note)
let j: Int = 0
while j < nn {
let all: [Int] = native_list_append(all, native_list_get(note, j))
let j: Int = j + 1
}
let count: Int = count + nn
let fi: Int = fi + 1
}
let ok: Int = wav_write(path, all, count, rate)
return count
}
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// image-demo.el - Drive the native PNG surface: plan a scene from a small
// meaning phrase (incl. a NEG frame) and emit a byte-valid 64x64 PNG whose
// palette is read from elp/faculty/sig/scene.basis.
fn img_frame(relation: String, polarity: String, confidence: String, importance: String, salience: String, subj_id: String) -> [String] {
let f: [String] = native_list_empty()
let f: [String] = native_list_append(f, "relation")
let f: [String] = native_list_append(f, relation)
let f: [String] = native_list_append(f, "polarity")
let f: [String] = native_list_append(f, polarity)
let f: [String] = native_list_append(f, "confidence")
let f: [String] = native_list_append(f, confidence)
let f: [String] = native_list_append(f, "importance")
let f: [String] = native_list_append(f, importance)
let f: [String] = native_list_append(f, "salience")
let f: [String] = native_list_append(f, salience)
let f: [String] = native_list_append(f, "subj_id")
let f: [String] = native_list_append(f, subj_id)
return f
}
fn rgb_str(c: [Int]) -> String {
return int_to_str(native_list_get(c, 0)) + "," + int_to_str(native_list_get(c, 1)) + "," + int_to_str(native_list_get(c, 2))
}
fn run_image() -> Int {
fs_mkdir("/Users/will/Development/neuron-technologies/foundation/el/.claude/worktrees/agent-aaf04b0a9714c4070/elp/faculty/out")
let table: [Int] = crc_table()
println("crc_table[1]=" + int_to_str(native_list_get(table, 1)) + " (expect 1996959894 / 0x77073096)")
let basis: [String] = basis_load("/Users/will/Development/neuron-technologies/foundation/el/.claude/worktrees/agent-aaf04b0a9714c4070/elp/faculty/sig/scene.basis")
let warm: [Int] = parse_rgb(basis_field(basis, "warm"))
let cool: [Int] = parse_rgb(basis_field(basis, "cool"))
let bg: [Int] = parse_rgb(basis_field(basis, "bg"))
println("basis warm=" + rgb_str(warm) + " cool=" + rgb_str(cool) + " bg=" + rgb_str(bg) + " (read from scene.basis)")
let frames: [[String]] = native_list_empty()
let frames: [[String]] = native_list_append(frames, img_frame("agent", "aff", "0.9", "0.8", "0", "s1"))
let frames: [[String]] = native_list_append(frames, img_frame("theme", "aff", "0.7", "0.6", "1", "s2"))
let frames: [[String]] = native_list_append(frames, img_frame("cause", "aff", "0.8", "0.9", "0", "s3"))
let frames: [[String]] = native_list_append(frames, img_frame("negation", "neg", "0.85", "0.7", "1", "s4"))
let frames: [[String]] = native_list_append(frames, img_frame("goal", "aff", "0.6", "0.5", "0", "s5"))
let frames: [[String]] = native_list_append(frames, img_frame("result", "aff", "0.95", "1.0", "1", "s6"))
let shapes: [[Int]] = plan_scene(frames, warm, cool)
let ns: Int = native_list_len(shapes)
println("planned " + int_to_str(ns) + " shapes:")
let si: Int = 0
while si < ns {
let sh: [Int] = native_list_get(shapes, si)
let pol: String = surface_get(native_list_get(frames, si), "polarity")
println(" shape " + int_to_str(si) + " type=" + int_to_str(native_list_get(sh, 0)) + " x=" + int_to_str(native_list_get(sh, 1)) + " y=" + int_to_str(native_list_get(sh, 2)) + " size=" + int_to_str(native_list_get(sh, 3)) + " rgb=" + int_to_str(native_list_get(sh, 4)) + "," + int_to_str(native_list_get(sh, 5)) + "," + int_to_str(native_list_get(sh, 6)) + " polarity=" + pol)
let si: Int = si + 1
}
let raw: [Int] = rasterize(64, 64, shapes, bg)
println("rasterized raw (filtered scanlines) bytes=" + int_to_str(native_list_len(raw)) + " (expect 12352)")
let png: [Int] = png_build(64, 64, raw, table)
let plen: Int = native_list_len(png)
let ok: Int = png_write("/Users/will/Development/neuron-technologies/foundation/el/.claude/worktrees/agent-aaf04b0a9714c4070/elp/faculty/out/scene.png", png)
println("PNG bytes=" + int_to_str(plen) + " -> /Users/will/Development/neuron-technologies/foundation/el/.claude/worktrees/agent-aaf04b0a9714c4070/elp/faculty/out/scene.png (write_ok=" + int_to_str(ok) + ")")
return plen
}
println("image-demo returned png_bytes=" + int_to_str(run_image()))
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// image-surface.el - Native own-core raster PNG surface (the image efferent
// twin of audio). Renders a 64x64 RGB scene deterministically from a frame's
// meaning-geometry, then serialises a byte-valid PNG entirely own-core:
// 8-byte magic, IHDR, IDAT (zlib STORED/uncompressed DEFLATE + Adler32), IEND,
// with a per-chunk CRC32 computed via software xor32 (EL has no bitwise ops).
//
// The RGB palette basis is read from elp/faculty/sig/scene.basis (data, not
// literals) - the same read-from-learned discipline as the audio signatures.
// Integer-only throughout; pixels are composed functionally (painter's order)
// so no list mutation is needed.
// -- small int/parse helpers (self-contained) ----------------------------------
fn i_str_to_int(s: String) -> Int {
let n: Int = str_len(s)
let i: Int = 0
let v: Int = 0
while i < n {
let c: Int = str_char_code(s, i)
if c >= 48 {
if c < 58 {
let v: Int = v * 10 + (c - 48)
}
}
let i: Int = i + 1
}
return v
}
fn basis_load(path: String) -> [String] {
return str_split(fs_read(path), "\n")
}
fn basis_field(lines: [String], key: String) -> String {
let pref: String = key + ": "
let n: Int = native_list_len(lines)
let plen: Int = str_len(pref)
let i: Int = 0
while i < n {
let ln: String = native_list_get(lines, i)
if str_starts_with(ln, pref) {
return str_slice(ln, plen, str_len(ln))
}
let i: Int = i + 1
}
return ""
}
fn parse_rgb(csv: String) -> [Int] {
let parts: [String] = str_split(csv, ",")
let out: [Int] = native_list_empty()
let n: Int = native_list_len(parts)
let i: Int = 0
while i < n {
let v: Int = i_str_to_int(native_list_get(parts, i))
let out: [Int] = native_list_append(out, v)
let i: Int = i + 1
}
return out
}
// -- software 32-bit XOR (no bitwise ops in EL) --------------------------------
fn xor32(a: Int, b: Int) -> Int {
let r: Int = 0
let bit: Int = 1
let i: Int = 0
while i < 32 {
let abit: Int = (a / bit) % 2
let bbit: Int = (b / bit) % 2
if abit != bbit {
let add: Int = bit
let r: Int = r + add
}
let bit: Int = bit * 2
let i: Int = i + 1
}
return r
}
// -- CRC32 (table-driven, table built with xor32) ------------------------------
fn crc_table() -> [Int] {
let t: [Int] = native_list_empty()
let n: Int = 0
while n < 256 {
let c: Int = n
let k: Int = 0
while k < 8 {
if c % 2 == 1 {
let h: Int = c / 2
let c: Int = xor32(h, 3988292384)
} else {
let c: Int = c / 2
}
let k: Int = k + 1
}
let t: [Int] = native_list_append(t, c)
let n: Int = n + 1
}
return t
}
fn crc32_of(bytes: [Int], table: [Int]) -> Int {
let crc: Int = 4294967295
let n: Int = native_list_len(bytes)
let i: Int = 0
while i < n {
let b: Int = native_list_get(bytes, i)
let lo: Int = crc % 256
let idx: Int = xor32(lo, b) % 256
let tv: Int = native_list_get(table, idx)
let hi: Int = crc / 256
let crc: Int = xor32(hi, tv)
let i: Int = i + 1
}
return xor32(crc, 4294967295)
}
// -- Adler32 (for the zlib trailer) --------------------------------------------
fn adler32_of(bytes: [Int]) -> Int {
let a: Int = 1
let b: Int = 0
let n: Int = native_list_len(bytes)
let i: Int = 0
while i < n {
let byte: Int = native_list_get(bytes, i)
let a: Int = (a + byte) % 65521
let b: Int = (b + a) % 65521
let i: Int = i + 1
}
return b * 65536 + a
}
// -- byte-list append helpers --------------------------------------------------
fn app_u32be(dst: [Int], v: Int) -> [Int] {
let dst: [Int] = native_list_append(dst, (v / 16777216) % 256)
let dst: [Int] = native_list_append(dst, (v / 65536) % 256)
let dst: [Int] = native_list_append(dst, (v / 256) % 256)
let dst: [Int] = native_list_append(dst, v % 256)
return dst
}
fn app_tag(dst: [Int], s: String) -> [Int] {
let n: Int = str_len(s)
let i: Int = 0
while i < n {
let dst: [Int] = native_list_append(dst, str_char_code(s, i))
let i: Int = i + 1
}
return dst
}
fn app_all(dst: [Int], src: [Int]) -> [Int] {
let n: Int = native_list_len(src)
let i: Int = 0
while i < n {
let dst: [Int] = native_list_append(dst, native_list_get(src, i))
let i: Int = i + 1
}
return dst
}
// -- plan: frame meaning-geometry -> shape atoms -------------------------------
// shape = [type, x, y, size, r, g, b] (type 0=rect 1=disc 2=triangle)
fn charsum(s: String) -> Int {
let n: Int = str_len(s)
let i: Int = 0
let acc: Int = 0
while i < n {
let c: Int = str_char_code(s, i)
let acc: Int = acc + c
let i: Int = i + 1
}
return acc
}
fn micro_of(s: String) -> Int {
let dot: Int = str_index_of(s, ".")
if dot < 0 { return i_str_to_int(s) * 1000000 }
let n: Int = str_len(s)
let fp: String = str_slice(s, dot + 1, n)
let ip: String = str_slice(s, 0, dot)
let iv: Int = i_str_to_int(ip)
let fv: Int = 0
let scale: Int = 100000
let fl: Int = str_len(fp)
let i: Int = 0
while i < 6 {
let d: Int = 0
if i < fl { let d: Int = str_char_code(fp, i) - 48 }
let fv: Int = fv + d * scale
let scale: Int = scale / 10
let i: Int = i + 1
}
return iv * 1000000 + fv
}
fn plan_scene(frames: [[String]], warm: [Int], cool: [Int]) -> [[Int]] {
let shapes: [[Int]] = native_list_empty()
let nf: Int = native_list_len(frames)
let fi: Int = 0
while fi < nf {
let fr: [String] = native_list_get(frames, fi)
let relation: String = surface_get(fr, "relation")
let polarity: String = surface_get(fr, "polarity")
let confidence: String = surface_get(fr, "confidence")
let importance: String = surface_get(fr, "importance")
let salience: String = surface_get(fr, "salience")
// relation -> shape type
let stype: Int = charsum(relation) % 3
// confidence -> size (8..22)
let cmi: Int = micro_of(confidence)
let size: Int = 8 + cmi / 71428
// salience -> y
let sal: Int = i_str_to_int(salience)
let y: Int = 6 + sal * 26
// subj_id/index -> x
let x: Int = 4 + (fi * 10) % 48
// polarity -> warm/cool base color
let br: Int = native_list_get(warm, 0)
let bg2: Int = native_list_get(warm, 1)
let bb: Int = native_list_get(warm, 2)
if str_eq(polarity, "neg") {
let br: Int = native_list_get(cool, 0)
let bg2: Int = native_list_get(cool, 1)
let bb: Int = native_list_get(cool, 2)
}
// importance -> brightness (500..1000 permille)
let imi: Int = micro_of(importance)
let bpm: Int = 500 + imi / 2000
let r: Int = br * bpm / 1000
let g: Int = bg2 * bpm / 1000
let b: Int = bb * bpm / 1000
let sh: [Int] = native_list_empty()
let sh: [Int] = native_list_append(sh, stype)
let sh: [Int] = native_list_append(sh, x)
let sh: [Int] = native_list_append(sh, y)
let sh: [Int] = native_list_append(sh, size)
let sh: [Int] = native_list_append(sh, r)
let sh: [Int] = native_list_append(sh, g)
let sh: [Int] = native_list_append(sh, b)
let shapes: [[Int]] = native_list_append(shapes, sh)
let fi: Int = fi + 1
}
return shapes
}
// covers: is (px,py) inside this shape?
fn covers(sh: [Int], px: Int, py: Int) -> Bool {
let stype: Int = native_list_get(sh, 0)
let sx: Int = native_list_get(sh, 1)
let sy: Int = native_list_get(sh, 2)
let size: Int = native_list_get(sh, 3)
let cx: Int = sx + size / 2
if stype == 0 {
if px >= sx {
if px < sx + size {
if py >= sy {
if py < sy + size {
return true
}
}
}
}
return false
}
if stype == 1 {
let rad: Int = size / 2
let dx: Int = px - cx
let dy: Int = py - (sy + rad)
if dx * dx + dy * dy <= rad * rad {
return true
}
return false
}
// triangle: apex at top (sy), base at sy+size
if py >= sy {
if py < sy + size {
let dyv: Int = py - sy
let halfw: Int = dyv / 2
let dxv: Int = px - cx
let adx: Int = dxv
if adx < 0 { let adx: Int = 0 - dxv }
if adx <= halfw {
return true
}
}
}
return false
}
// pixel_color: painter's algorithm - last covering shape wins. Returns [r,g,b].
fn pixel_color(px: Int, py: Int, shapes: [[Int]], bg: [Int]) -> [Int] {
let r: Int = native_list_get(bg, 0)
let g: Int = native_list_get(bg, 1)
let b: Int = native_list_get(bg, 2)
let n: Int = native_list_len(shapes)
let i: Int = 0
while i < n {
let sh: [Int] = native_list_get(shapes, i)
if covers(sh, px, py) {
let r: Int = native_list_get(sh, 4)
let g: Int = native_list_get(sh, 5)
let b: Int = native_list_get(sh, 6)
}
let i: Int = i + 1
}
let out: [Int] = native_list_empty()
let out: [Int] = native_list_append(out, r)
let out: [Int] = native_list_append(out, g)
let out: [Int] = native_list_append(out, b)
return out
}
// rasterize: build the raw (filtered) scanline byte stream, filter byte 0 / row.
fn rasterize(w: Int, h: Int, shapes: [[Int]], bg: [Int]) -> [Int] {
let raw: [Int] = native_list_empty()
let y: Int = 0
while y < h {
let raw: [Int] = native_list_append(raw, 0)
let x: Int = 0
while x < w {
let col: [Int] = pixel_color(x, y, shapes, bg)
let raw: [Int] = native_list_append(raw, native_list_get(col, 0))
let raw: [Int] = native_list_append(raw, native_list_get(col, 1))
let raw: [Int] = native_list_append(raw, native_list_get(col, 2))
let x: Int = x + 1
}
let y: Int = y + 1
}
return raw
}
// zlib stream with a single STORED (uncompressed) DEFLATE block + Adler32.
fn zlib_store(raw: [Int]) -> [Int] {
let z: [Int] = native_list_empty()
let z: [Int] = native_list_append(z, 120)
let z: [Int] = native_list_append(z, 1)
let z: [Int] = native_list_append(z, 1)
let len: Int = native_list_len(raw)
let nlen: Int = 65535 - len
let z: [Int] = native_list_append(z, len % 256)
let z: [Int] = native_list_append(z, (len / 256) % 256)
let z: [Int] = native_list_append(z, nlen % 256)
let z: [Int] = native_list_append(z, (nlen / 256) % 256)
let z: [Int] = app_all(z, raw)
let ad: Int = adler32_of(raw)
let z: [Int] = app_u32be(z, ad)
return z
}
// append a full PNG chunk: length + (type+data) + crc32(type+data).
fn app_chunk(png: [Int], type_and_data: [Int], table: [Int]) -> [Int] {
let total: Int = native_list_len(type_and_data)
let dlen: Int = total - 4
let png: [Int] = app_u32be(png, dlen)
let png: [Int] = app_all(png, type_and_data)
let crc: Int = crc32_of(type_and_data, table)
let png: [Int] = app_u32be(png, crc)
return png
}
fn png_build(w: Int, h: Int, raw: [Int], table: [Int]) -> [Int] {
let png: [Int] = native_list_empty()
// 8-byte signature
let png: [Int] = native_list_append(png, 137)
let png: [Int] = native_list_append(png, 80)
let png: [Int] = native_list_append(png, 78)
let png: [Int] = native_list_append(png, 71)
let png: [Int] = native_list_append(png, 13)
let png: [Int] = native_list_append(png, 10)
let png: [Int] = native_list_append(png, 26)
let png: [Int] = native_list_append(png, 10)
// IHDR
let ihdr: [Int] = native_list_empty()
let ihdr: [Int] = app_tag(ihdr, "IHDR")
let ihdr: [Int] = app_u32be(ihdr, w)
let ihdr: [Int] = app_u32be(ihdr, h)
let ihdr: [Int] = native_list_append(ihdr, 8)
let ihdr: [Int] = native_list_append(ihdr, 2)
let ihdr: [Int] = native_list_append(ihdr, 0)
let ihdr: [Int] = native_list_append(ihdr, 0)
let ihdr: [Int] = native_list_append(ihdr, 0)
let png: [Int] = app_chunk(png, ihdr, table)
// IDAT
let z: [Int] = zlib_store(raw)
let idat: [Int] = native_list_empty()
let idat: [Int] = app_tag(idat, "IDAT")
let idat: [Int] = app_all(idat, z)
let png: [Int] = app_chunk(png, idat, table)
// IEND
let iend: [Int] = native_list_empty()
let iend: [Int] = app_tag(iend, "IEND")
let png: [Int] = app_chunk(png, iend, table)
return png
}
fn png_write(path: String, png: [Int]) -> Int {
let n: Int = native_list_len(png)
let buf: String = __str_alloc(n)
let i: Int = 0
while i < n {
let buf: String = __str_set_char(buf, i, native_list_get(png, i))
let i: Int = i + 1
}
let ok: Int = fs_write_bytes(path, buf, n)
return ok
}
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// organ-read.el - Route the render's GEOMETRY READ through the ingest ORGAN's
// saved engram files (the coordinator's source of truth). For each file we
// engram_load() it, engram_scan_nodes_json(limit, offset) to get the node array,
// and cache each node's self-contained CONTENT string keyed by symbol. Because
// the cached value carries the numbers ("... f1=730 ..."), the cache SURVIVES the
// store being REPLACED by the next engram_load so we load+cache phonetics
// FIRST, then load+cache accent. The .psv path remains a fallback.
//
// engram_scan_nodes_json(limit, offset) takes NO query; it returns nodes
// salience-sorted, so limit must be >= node count and we filter client-side.
// (engram_search / engram_scan_nodes return len-5 garbage unused.)
// Find every occurrence of `marker` in the scan JSON; for each, cache
// sym -> a 150-char content window (enough to hold f1..amp). Duplicates from the
// node's "content" and "label" fields are harmless (first match wins on read).
fn organ_cache(j: String, marker: String, mlen: Int, win_len: Int, need: String) -> [String] {
let m: [String] = native_list_empty()
let jl: Int = str_len(j)
let off: Int = 0
while off < jl {
let rest: String = str_slice(j, off, jl)
let p: Int = str_index_of(rest, marker)
if p < 0 {
off = jl
} else {
let abs: Int = off + p
let win: String = str_slice(j, abs, abs + win_len)
let after: String = str_slice(win, mlen, str_len(win))
let sp: Int = str_index_of(after, " ")
let hasneed: Int = str_index_of(win, need)
if sp > 0 {
if hasneed >= 0 {
let sym: String = str_slice(after, 0, sp)
m = native_list_append(m, sym)
m = native_list_append(m, win)
}
}
off = abs + mlen
}
}
return m
}
// Load the phonetics organ file and cache sym -> content. mlen("phoneme ")=8.
fn organ_pmap(path: String) -> [String] {
let ok: Bool = engram_load(path)
if ok == false {
return native_list_empty()
}
let j: String = engram_scan_nodes_json(600, 0)
return organ_cache(j, "phoneme ", 8, 150, "f1=")
}
// Load the accent organ file and cache sym -> content. mlen("accent_target ")=14.
// Vowel overrides carry f1=..; the R rule carries drop_coda_r (need="=" matches
// both, i.e. any well-formed accent_target field).
fn organ_amap(path: String) -> [String] {
let ok: Bool = engram_load(path)
if ok == false {
return native_list_empty()
}
let j: String = engram_scan_nodes_json(600, 0)
return organ_cache(j, "accent_target ", 14, 90, "=")
}
// Vowel-set (categorical class) from the phonetics .psv class column.
fn organ_vset(path: String) -> [String] {
let content: String = fs_read(path)
let lines: [String] = str_split(content, "\n")
let nl: Int = native_list_len(lines)
let v: [String] = native_list_empty()
let li: Int = 0
while li < nl {
let line: String = native_list_get(lines, li)
let ok: Int = 1
if str_len(line) < 5 {
ok = 0
}
if ok == 1 {
if str_char_code(line, 0) == 35 {
ok = 0
}
}
if ok == 1 {
let f: [String] = str_split(line, "|")
if native_list_len(f) >= 12 {
if str_eq(native_list_get(f, 11), "vowel") {
v = native_list_append(v, native_list_get(f, 0))
}
}
}
li = li + 1
}
return v
}
// Word -> phoneme-sequence cache from lexicon.psv (engram-independent).
fn organ_lex(path: String) -> [String] {
let content: String = fs_read(path)
let lines: [String] = str_split(content, "\n")
let nl: Int = native_list_len(lines)
let m: [String] = native_list_empty()
let li: Int = 0
while li < nl {
let line: String = native_list_get(lines, li)
let ok: Int = 1
if str_len(line) < 3 {
ok = 0
}
if ok == 1 {
if str_char_code(line, 0) == 35 {
ok = 0
}
}
if ok == 1 {
let f: [String] = str_split(line, "|")
if native_list_len(f) >= 2 {
m = native_list_append(m, native_list_get(f, 0))
m = native_list_append(m, native_list_get(f, 1))
}
}
li = li + 1
}
return m
}
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// speech-ingest.el - The native LOAD step of the ingest organ, for the SPEECH
// primitives. Reads the acoustic-phonetics SOURCE (elp/data/phonetics.psv) and
// the pronunciation lexicon SOURCE (elp/data/lexicon.psv) and emits a PHONEME
// MANIFOLD into the engram: one node per phoneme (faithful, provenance-tagged
// content) + is_a edges to phoneme-class nodes (a discrete manifold, not islands).
// The render then PULLS phoneme geometry back from the engram via phon_geo
// zero phonetic numbers in code. Source -> manifold -> merge; the same output
// the polymorphic ingest organ will produce and subsume.
// -- small parsing helpers ---------------------------------------------------
fn sp_map_get(pairs: [String], key: String) -> String {
let n: Int = native_list_len(pairs)
let i: Int = 0
while i < n - 1 {
let k: String = native_list_get(pairs, i)
if str_eq(k, key) {
return native_list_get(pairs, i + 1)
}
let i = i + 2
}
return ""
}
// read the unsigned integer that follows `key` inside string s (e.g. key "F1=")
fn parse_uint_from(s: String, key: String) -> Int {
let idx: Int = str_index_of(s, key)
if idx < 0 {
return 0
}
let start: Int = idx + str_len(key)
let n: Int = str_len(s)
let i: Int = start
let val: Int = 0
while i < n {
let c: Int = str_char_code(s, i)
if c >= 48 {
if c <= 57 {
val = val * 10 + (c - 48)
i = i + 1
} else {
i = n
}
} else {
i = n
}
}
return val
}
fn clean_word(w: String) -> String {
let low: String = str_to_lower(w)
let n: Int = str_len(low)
let out: String = ""
let i: Int = 0
while i < n {
let c: Int = str_char_code(low, i)
if c >= 97 {
if c <= 122 {
out = out + str_char_at(low, i)
}
}
i = i + 1
}
return out
}
// -- INGEST: acoustic-phonetics source -> phoneme manifold in the engram ------
// Returns the symbol -> node-id index (pmap) the render reads geometry through.
fn ingest_phonetics(path: String) -> [String] {
let content: String = fs_read(path)
let lines: [String] = str_split(content, "\n")
let nl: Int = native_list_len(lines)
let pmap: [String] = native_list_empty()
let classmap: [String] = native_list_empty()
let li: Int = 0
while li < nl {
let line: String = native_list_get(lines, li)
let ll: Int = str_len(line)
let skip: Int = 0
if ll < 5 {
skip = 1
}
if skip == 0 {
let first: Int = str_char_code(line, 0)
if first == 35 {
skip = 1
}
}
if skip == 0 {
let f: [String] = str_split(line, "|")
let nf: Int = native_list_len(f)
if nf >= 12 {
let sym: String = native_list_get(f, 0)
let f1: String = native_list_get(f, 1)
let f2: String = native_list_get(f, 2)
let f3: String = native_list_get(f, 3)
let b1: String = native_list_get(f, 4)
let b2: String = native_list_get(f, 5)
let b3: String = native_list_get(f, 6)
let vo: String = native_list_get(f, 7)
let na: String = native_list_get(f, 8)
let du: String = native_list_get(f, 9)
let am: String = native_list_get(f, 10)
let cls: String = native_list_get(f, 11)
let cont: String = "phoneme " + sym + " | f1=" + f1 + " f2=" + f2 + " f3=" + f3 + " bw1=" + b1 + " bw2=" + b2 + " bw3=" + b3 + " voiced=" + vo + " nasal=" + na + " dur=" + du + " amp=" + am + " class=" + cls + " src=PetersonBarney1952-Hillenbrand1995"
let id: String = engram_node(cont, "Phoneme", 80)
pmap = native_list_append(pmap, sym)
pmap = native_list_append(pmap, cont)
// manifold edge: phoneme is_a class
let cid: String = sp_map_get(classmap, cls)
if str_eq(cid, "") {
cid = engram_node("phoneme-class " + cls + " src=acoustic-phonetics", "PhonemeClass", 80)
classmap = native_list_append(classmap, cls)
classmap = native_list_append(classmap, cid)
}
engram_connect(id, cid, 80, "is_a")
}
}
li = li + 1
}
return pmap
}
// -- INGEST: pronunciation lexicon source -> word nodes ----------------------
fn ingest_lexicon(path: String) -> [String] {
let content: String = fs_read(path)
let lines: [String] = str_split(content, "\n")
let nl: Int = native_list_len(lines)
let lmap: [String] = native_list_empty()
let li: Int = 0
while li < nl {
let line: String = native_list_get(lines, li)
let ll: Int = str_len(line)
let skip: Int = 0
if ll < 3 {
skip = 1
}
if skip == 0 {
let first: Int = str_char_code(line, 0)
if first == 35 {
skip = 1
}
}
if skip == 0 {
let f: [String] = str_split(line, "|")
let nf: Int = native_list_len(f)
if nf >= 2 {
let word: String = native_list_get(f, 0)
let seq: String = native_list_get(f, 1)
let id: String = engram_node("word " + word + " phonemes " + seq + " src=lexicon", "Pronunciation", 80)
lmap = native_list_append(lmap, word)
lmap = native_list_append(lmap, seq)
}
}
li = li + 1
}
return lmap
}
// -- READ geometry back from the engram (the render's afferent lookup) --------
// phon_geo(sym) -> [F1,F2,F3,B1,B2,B3,voiced,nasal,dur,amp], parsed from the
// ingested phoneme node's content. NO formant numbers live in this code.
fn phon_geo(pmap: [String], sym: String) -> [Int] {
let id: String = sp_map_get(pmap, sym)
if str_eq(id, "") {
id = sp_map_get(pmap, "AX")
}
let out: [Int] = native_list_empty()
if str_eq(id, "") {
let out = native_list_append(out, 500)
let out = native_list_append(out, 1500)
let out = native_list_append(out, 2500)
let out = native_list_append(out, 80)
let out = native_list_append(out, 100)
let out = native_list_append(out, 150)
let out = native_list_append(out, 1)
let out = native_list_append(out, 0)
let out = native_list_append(out, 80)
let out = native_list_append(out, 80)
return out
}
let j: String = id
let out = native_list_append(out, parse_uint_from(j, "f1="))
let out = native_list_append(out, parse_uint_from(j, "f2="))
let out = native_list_append(out, parse_uint_from(j, "f3="))
let out = native_list_append(out, parse_uint_from(j, "bw1="))
let out = native_list_append(out, parse_uint_from(j, "bw2="))
let out = native_list_append(out, parse_uint_from(j, "bw3="))
let out = native_list_append(out, parse_uint_from(j, "voiced="))
let out = native_list_append(out, parse_uint_from(j, "nasal="))
let out = native_list_append(out, parse_uint_from(j, "dur="))
let out = native_list_append(out, parse_uint_from(j, "amp="))
return out
}
// word -> phoneme codes, read from the ingested lexicon node.
fn word_phonemes(lmap: [String], word: String) -> [String] {
let id: String = sp_map_get(lmap, word)
if str_eq(id, "") {
let r: [String] = native_list_empty()
let r = native_list_append(r, "AX")
return r
}
return str_split(id, " ")
}
// realized text -> flat phoneme-code sequence (SIL between words + at ends).
fn text_phonemes(lmap: [String], text: String) -> [String] {
let words: [String] = str_split(text, " ")
let nw: Int = native_list_len(words)
let seq: [String] = native_list_empty()
let seq = native_list_append(seq, "SIL")
let wi: Int = 0
while wi < nw {
let raw: String = native_list_get(words, wi)
let w: String = clean_word(raw)
if str_eq(w, "") {
wi = wi + 1
} else {
let ph: [String] = word_phonemes(lmap, w)
let np: Int = native_list_len(ph)
let pi: Int = 0
while pi < np {
let code: String = native_list_get(ph, pi)
seq = native_list_append(seq, code)
pi = pi + 1
}
seq = native_list_append(seq, "SIL")
wi = wi + 1
}
}
return seq
}
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// speech.el - The native SPEECH render path + voice-by-imitation extractor.
//
// Speech = the AUDIO surface (surface_profile_audio) rendering LANGUAGE-meaning
// through a VOICE signature. The realizer's language faculty supplies the words
// (meaning -> sem_realize -> text); this module turns text -> phonemes (phonetics.el)
// -> a formant-target track over time -> SUPERPOSES formant resonances over a
// glottal source (own-core formant synthesis, the exact integer mirror of the
// music additive superpose) -> own-core PCM/WAV. Two paths:
// (1) RENDER: speak(text, voice) -> spoken WAV.
// (2) IMITATE: voice_analyze(pcm) -> a voice signature grabbed BY EAR
// (autocorrelation pitch + integer-DFT formant peaks), then render
// any new meaning in that voice. An impression, not a corpus.
// All integer/fixed-point (EL float arithmetic is unusable).
// -- Own-core integer sine (Bhaskara I), phase 0..65535 = one cycle -----------
fn sp_sin(phase: Int) -> Int {
let deg: Int = phase * 360 / 65536
let neg: Int = 0
if deg > 180 {
deg = deg - 180
neg = 1
}
let t: Int = deg * (180 - deg)
let num: Int = 32767 * 4 * t
let den: Int = 40500 - t
let v: Int = num / den
if neg == 1 {
v = 0 - v
}
return v
}
fn sp_cos(phase: Int) -> Int {
let p: Int = phase + 16384
p = p - (p / 65536) * 65536
return sp_sin(p)
}
// One formant resonance (Lorentzian peak), Q15. Peak 32767 at f=fc.
fn sp_gain(f: Int, fc: Int, bw: Int) -> Int {
let d: Int = f - fc
let den: Int = d * d + bw * bw
let num: Int = 32767 * bw * bw
return num / den
}
fn sp_isqrt(n: Int) -> Int {
if n <= 0 {
return 0
}
let x: Int = n
let y: Int = (x + 1) / 2
while y < x {
x = y
y = (x + n / x) / 2
}
return x
}
// -- WAV serializer (thin medium; the only non-DSP glue) ---------------------
fn wav_le16(buf: String, off: Int, v: Int) -> String {
let u: Int = v
if u < 0 {
u = u + 65536
}
let lo: Int = u - (u / 256) * 256
let hi: Int = u / 256
let b: String = __str_set_char(buf, off, lo)
b = __str_set_char(b, off + 1, hi)
return b
}
fn wav_le32(buf: String, off: Int, v: Int) -> String {
let b0: Int = v - (v / 256) * 256
let r1: Int = v / 256
let b1: Int = r1 - (r1 / 256) * 256
let r2: Int = r1 / 256
let b2: Int = r2 - (r2 / 256) * 256
let b3: Int = r2 / 256
let b: String = __str_set_char(buf, off, b0)
b = __str_set_char(b, off + 1, b1)
b = __str_set_char(b, off + 2, b2)
b = __str_set_char(b, off + 3, b3)
return b
}
fn wav_ascii(buf: String, off: Int, s: String) -> String {
let n: Int = str_len(s)
let i: Int = 0
let b: String = buf
while i < n {
let c: Int = str_char_code(s, i)
b = __str_set_char(b, off + i, c)
i = i + 1
}
return b
}
fn write_wav(samples: [Int], sr: Int, path: String) -> Bool {
let ns: Int = native_list_len(samples)
let datalen: Int = ns * 2
let total: Int = 44 + datalen
let buf: String = __str_alloc(total)
buf = wav_ascii(buf, 0, "RIFF")
buf = wav_le32(buf, 4, 36 + datalen)
buf = wav_ascii(buf, 8, "WAVE")
buf = wav_ascii(buf, 12, "fmt ")
buf = wav_le32(buf, 16, 16)
buf = wav_le16(buf, 20, 1)
buf = wav_le16(buf, 22, 1)
buf = wav_le32(buf, 24, sr)
buf = wav_le32(buf, 28, sr * 2)
buf = wav_le16(buf, 32, 2)
buf = wav_le16(buf, 34, 16)
buf = wav_ascii(buf, 36, "data")
buf = wav_le32(buf, 40, datalen)
let j: Int = 0
let off: Int = 44
while j < ns {
let raw: Int = native_list_get(samples, j)
buf = wav_le16(buf, off, raw)
off = off + 2
j = j + 1
}
return __fs_write_bytes(path, buf, total)
}
// One formant resonance as a float Lorentzian peak (own-core physics).
fn fgain(f: Float, fc: Float, bw: Float) -> Float {
let d: Float = f - fc
return (bw * bw) / (d * d + bw * bw)
}
// His PITCH MELODY from measured prosody [f0_median, f0_min, f0_max, declination].
// A natural statement shape over the utterance: onset rise to the median, a
// near-flat body (his declination is ~0.6 Hz/s), and a final fall toward f0_min.
// Follows his melody + range, not a fixed 0.85 decline. gidx/total = position.
fn prosody_f0(pros: [Int], gidx: Int, total: Int) -> Int {
let med: Int = native_list_get(pros, 0)
let lo: Int = native_list_get(pros, 1)
let hi: Int = native_list_get(pros, 2)
let p: Int = gidx * 1000 / total
let f0: Int = med
if p < 150 {
f0 = lo + (med - lo) * p / 150
} else {
if p > 700 {
f0 = med + (lo - med) * (p - 700) / 300
} else {
f0 = med
}
}
if f0 < lo {
f0 = lo
}
if f0 > hi {
f0 = hi
}
return f0
}
// -- The render: phoneme codes + voice signature -> normalized PCM samples ----
// Formant geometry per phoneme is READ FROM THE ENGRAM (pmap) via phon_geo no
// table in code. The optional ACCENT map (amap) composes a transform onto the
// voice (voice (+) accent, separable): RP formant overrides read from the accent
// manifold + a non-rhotic coda-R drop. Empty amap = base General-American.
// Synthesis is FLOAT: a real phase accumulator + math_sin, superposition physics.
fn synth_codes_accent(codes0: [String], voice: [String], pmap: [String], amap: [String], vset: [String], vmap: [String], prosody: [Int]) -> [Int] {
let sr: Int = 16000
let srf: Float = 16000.0
let two_pi: Float = 6.283185307
let kf: Int = voice_get_int(voice, "kf")
let f0s: Int = voice_get_int(voice, "f0")
let f0e: Int = voice_get_int(voice, "f0_end")
let durm: Int = voice_get_int(voice, "dur")
if kf <= 0 {
kf = 1000
}
if durm <= 0 {
durm = 1000
}
let use_accent: Int = 0
if native_list_len(amap) > 0 {
use_accent = 1
}
let codes: [String] = codes0
if use_accent == 1 {
if is_nonrhotic(amap) == 1 {
codes = apply_rhoticity(codes0, vset)
}
}
let nc: Int = native_list_len(codes)
// pass 1: per-segment sample counts + total
let segn: [Int] = native_list_empty()
let total: Int = 0
let ci: Int = 0
while ci < nc {
let code: String = native_list_get(codes, ci)
let p: [Int] = phon_geo(pmap, code)
let durms: Int = native_list_get(p, 8)
let ns: Int = durms * 16 * durm / 1000
segn = native_list_append(segn, ns)
total = total + ns
ci = ci + 1
}
if total <= 0 {
total = 1
}
// pass 2: synthesize
let samples: [Int] = native_list_empty()
let phasef: Float = 0.0
let gidx: Int = 0
let prevF1: Int = 500 * kf / 1000
let prevF2: Int = 1500 * kf / 1000
let prevF3: Int = 2500 * kf / 1000
let nstate: Int = 22695
let maxabs: Int = 1
let ci2: Int = 0
while ci2 < nc {
let code: String = native_list_get(codes, ci2)
let p: [Int] = phon_geo(pmap, code)
let rf1: Int = native_list_get(p, 0)
let rf2: Int = native_list_get(p, 1)
let rf3: Int = native_list_get(p, 2)
if use_accent == 1 {
let ov: [Int] = accent_formants(amap, code)
if native_list_len(ov) >= 3 {
rf1 = native_list_get(ov, 0)
rf2 = native_list_get(ov, 1)
rf3 = native_list_get(ov, 2)
}
}
// HIS measured vowel target overrides the generic/kf path (absolute Hz
// his formants already encode his vocal tract, so no kf scaling).
let usekf: Int = 1
if native_list_len(vmap) > 0 {
let hv: [Int] = vmap_get(vmap, code)
if native_list_len(hv) >= 3 {
rf1 = native_list_get(hv, 0)
rf2 = native_list_get(hv, 1)
rf3 = native_list_get(hv, 2)
usekf = 0
}
}
let F1t: Int = rf1 * kf / 1000
let F2t: Int = rf2 * kf / 1000
let F3t: Int = rf3 * kf / 1000
if usekf == 0 {
F1t = rf1
F2t = rf2
F3t = rf3
}
let B1: Int = native_list_get(p, 3)
let B2: Int = native_list_get(p, 4)
let B3: Int = native_list_get(p, 5)
let voiced: Int = native_list_get(p, 6)
let ampv: Int = native_list_get(p, 9)
let ns: Int = native_list_get(segn, ci2)
let trans: Int = ns / 2
if trans > 560 {
trans = 560
}
if trans < 1 {
trans = 1
}
let k: Int = 0
while k < ns {
let cF1: Int = F1t
let cF2: Int = F2t
let cF3: Int = F3t
if k < trans {
cF1 = prevF1 + (F1t - prevF1) * k / trans
cF2 = prevF2 + (F2t - prevF2) * k / trans
cF3 = prevF3 + (F3t - prevF3) * k / trans
}
let f0c: Int = f0s + (f0e - f0s) * gidx / total
if native_list_len(prosody) >= 3 {
f0c = prosody_f0(prosody, gidx, total)
}
if f0c < 40 {
f0c = 40
}
let env: Int = 32767
let ar: Int = 96
if k < ar {
env = 32767 * k / ar
}
let tail: Int = ns - k
if tail < ar {
env = 32767 * tail / ar
}
let f0cf: Float = int_to_float(f0c)
phasef = phasef + two_pi * f0cf / srf
if phasef > two_pi {
phasef = phasef - two_pi
}
let s: Int = 0
if voiced == 1 {
let cF1f: Float = int_to_float(cF1)
let cF2f: Float = int_to_float(cF2)
let cF3f: Float = int_to_float(cF3)
let B1f: Float = int_to_float(B1)
let B2f: Float = int_to_float(B2)
let B3f: Float = int_to_float(B3)
let acc: Float = 0.0
let h: Int = 1
while h <= 50 {
let hf: Float = int_to_float(h)
let fhf: Float = hf * f0cf
if fhf < 7900.0 {
let sv: Float = math_sin(phasef * hf)
let src: Float = 1.0 / hf
let g1: Float = fgain(fhf, cF1f, B1f)
let g2: Float = fgain(fhf, cF2f, B2f)
let g3: Float = fgain(fhf, cF3f, B3f)
let g: Float = g1 + g2 + g3
acc = acc + src * g * sv
}
h = h + 1
}
s = float_to_int(acc * 4000.0)
} else {
if ampv > 0 {
nstate = nstate * 1103515245 + 12345
nstate = nstate - (nstate / 2147483648) * 2147483648
if nstate < 0 {
nstate = 0 - nstate
}
let nz: Int = nstate / 32768 - 32768
s = nz
}
}
s = s * ampv / 100
s = s * env / 32767
samples = native_list_append(samples, s)
let a: Int = s
if a < 0 {
a = 0 - a
}
if a > maxabs {
maxabs = a
}
gidx = gidx + 1
k = k + 1
}
prevF1 = F1t
prevF2 = F2t
prevF3 = F3t
ci2 = ci2 + 1
}
// normalize to int16 range (~22000 peak)
let out: [Int] = native_list_empty()
let ntot: Int = native_list_len(samples)
let j: Int = 0
while j < ntot {
let raw: Int = native_list_get(samples, j)
let v: Int = raw * 22000 / maxabs
out = native_list_append(out, v)
j = j + 1
}
return out
}
// GA convenience wrapper (no accent) keeps the base render path.
fn synth_codes(codes: [String], voice: [String], pmap: [String]) -> [Int] {
let noacc: [String] = native_list_empty()
let novset: [String] = native_list_empty()
let novmap: [String] = native_list_empty()
let nopros: [Int] = native_list_empty()
return synth_codes_accent(codes, voice, pmap, noacc, novset, novmap, nopros)
}
// -- Voice-by-imitation: HEAR a PCM sample -> extract the voice signature -----
// Pitch by autocorrelation; vocal-tract scale (kf) from the F1 formant peak of a
// heard sustained vowel /AA/ (nominal F1 = 730 Hz) via an integer DFT. The
// analyzer sees ONLY the PCM samples never the source signature numbers so
// recovery is genuinely by ear.
fn voice_f0(samples: [Int], sr: Int) -> Int {
let n: Int = native_list_len(samples)
let start: Int = n / 4
let end: Int = n * 3 / 4
// bound the analysis window so accumulators can never overflow on long input
if end - start > 6000 {
end = start + 6000
}
let minlag: Int = sr / 300
let maxlag: Int = sr / 75
let best: Int = 0
let bestlag: Int = minlag
let lag: Int = minlag
while lag <= maxlag {
let sum: Int = 0
let i: Int = start
while i < end {
let ai: Int = native_list_get(samples, i)
let bi: Int = native_list_get(samples, i + lag)
sum = sum + ai * bi / 256
i = i + 2
}
if sum > best {
best = sum
bestlag = lag
}
lag = lag + 1
}
if bestlag < 1 {
bestlag = 1
}
return sr / bestlag
}
fn voice_peak_in_band(samples: [Int], sr: Int, flo: Int, fhi: Int) -> Int {
let n: Int = native_list_len(samples)
let start: Int = n / 4
let end: Int = n * 3 / 4
// bound the DFT window: re/im are accumulated /4096, and re*re must stay in
// int64 cap terms so (window/2)*(peak_term) squared cannot overflow.
if end - start > 3000 {
end = start + 3000
}
let bestmag: Int = 0
let bestf: Int = flo
let f: Int = flo
while f <= fhi {
let re: Int = 0
let im: Int = 0
let i: Int = start
while i < end {
let x: Int = native_list_get(samples, i)
let ph: Int = i * f * 65536 / sr
ph = ph - (ph / 65536) * 65536
let cq: Int = sp_cos(ph)
let sq: Int = sp_sin(ph)
re = re + x * cq / 4096
im = im + x * sq / 4096
i = i + 2
}
let mag: Int = re * re + im * im
if mag > bestmag {
bestmag = mag
bestf = f
}
f = f + 25
}
return bestf
}
// Analyze a heard sustained /AA/ -> a full voice signature (by ear).
fn voice_analyze(samples: [Int], sr: Int) -> [String] {
let f0: Int = voice_f0(samples, sr)
let f1: Int = voice_peak_in_band(samples, sr, 450, 1150)
let kf: Int = 1000 * f1 / 730
let f0e: Int = f0 * 85 / 100
return voice_new("imitated", f0, f0e, kf, 1000, 1000, 8)
}
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// surface-profile.el - Surface profile data and accessors.
//
// THE NATIVE EFFERENT SEAM: surface = a pluggable PROFILE, using the exact same
// slot-map mechanism as language-profile.el. A language profile tells the
// realizer HOW to shape a natural-language surface (word order, morphology); a
// SURFACE profile tells the realizer WHICH surface to project meaning onto
// (markdown, docx, html, plain, or a non-text medium like symbolic music).
//
// The generalization is exact: realize_lang(form, profile) already renders a
// SemForm parameterized by a [String] profile read via lang_get. Surface is one
// more axis of that same profile vector. One frame (sem_frame), one plan step
// (sem_to_spec), one render (realize) the surface is DATA, not a code path,
// precisely as language is data. Adding a surface means adding a profile, no
// engine change. This is the multimodal projector, native: geometry -> any
// surface, the efferent twin of ingest.
//
// Surface slot keys:
// surface - "markdown" | "docx" | "html" | "plain" | "midi" | "image"
// modality - "text" | "audio" | "image" | "video"
// media_type - MIME type of the emitted surface
// head_open - string prepended to a heading (e.g. "## " for markdown)
// head_close - string appended to a heading (e.g. "" for markdown, "</h2>" for html)
// emph_open - string opening emphasis (e.g. "*")
// emph_close - string closing emphasis (e.g. "*")
// item_mark - list-item marker (e.g. "- ")
// para_sep - paragraph separator (e.g. "\n\n")
//
// For a TEXT modality the render composes these markers around the surface that
// the EXISTING realizer produces (realize_lang / sem_realize). For a non-text
// modality (audio/image) the profile declares modality + media_type and the
// render dispatches to the medium projector, which reads the SAME frame's
// geometry (its intent/affect/structure) and projects it onto sound or pixels
// deterministic-from-meaning, nothing invented. That dispatch point is where a
// music profile or image profile conforms, native, no parallel layer.
// -- Constructor -------------------------------------------------------------
fn surface_profile(surface: String, modality: String, media_type: String, head_open: String, head_close: String, emph_open: String, emph_close: String, item_mark: String, para_sep: String) -> [String] {
let r: [String] = native_list_empty()
let r = native_list_append(r, "surface")
let r = native_list_append(r, surface)
let r = native_list_append(r, "modality")
let r = native_list_append(r, modality)
let r = native_list_append(r, "media_type")
let r = native_list_append(r, media_type)
let r = native_list_append(r, "head_open")
let r = native_list_append(r, head_open)
let r = native_list_append(r, "head_close")
let r = native_list_append(r, head_close)
let r = native_list_append(r, "emph_open")
let r = native_list_append(r, emph_open)
let r = native_list_append(r, "emph_close")
let r = native_list_append(r, emph_close)
let r = native_list_append(r, "item_mark")
let r = native_list_append(r, item_mark)
let r = native_list_append(r, "para_sep")
let r = native_list_append(r, para_sep)
return r
}
// -- Accessor (same convention as lang_get; standalone so this is a leaf) -----
fn surface_get(profile: [String], key: String) -> String {
let n: Int = native_list_len(profile)
let i: Int = 0
while i < n - 1 {
let k: String = native_list_get(profile, i)
if str_eq(k, key) {
return native_list_get(profile, i + 1)
}
let i = i + 2
}
return ""
}
fn surface_is_text(profile: [String]) -> Bool {
return str_eq(surface_get(profile, "modality"), "text")
}
// -- Built-in TEXT surface profiles ------------------------------------------
// Markdown: headings with "## ", emphasis with "*", "- " list items.
fn surface_profile_markdown() -> [String] {
return surface_profile("markdown", "text", "text/markdown", "## ", "", "*", "*", "- ", "\n\n")
}
// Plain text: no markup at all headings become bare uppercase-free lines.
fn surface_profile_plain() -> [String] {
return surface_profile("plain", "text", "text/plain", "", "", "", "", " - ", "\n\n")
}
// HTML: block-level heading/emphasis tags.
fn surface_profile_html() -> [String] {
return surface_profile("html", "text", "text/html", "<h2>", "</h2>", "<em>", "</em>", "<li>", "\n")
}
// docx: WordprocessingML is structural, not inline-markup; the head/emph slots
// carry the run/style intent that the OOXML emitter maps to <w:pStyle>. Declared
// here so docx is a first-class surface on the same seam.
fn surface_profile_docx() -> [String] {
return surface_profile("docx", "text", "application/vnd.openxmlformats-officedocument.wordprocessingml.document", "Heading2:", "", "b:", "", "bullet:", "\n")
}
// -- Built-in NON-TEXT surface profiles (the multimodal seam) ----------------
// Symbolic music (MIDI): modality=audio. The render dispatches to the music
// projector, which reads the SAME frame's intent/affect and projects it to
// pitch/rhythm deterministic-from-meaning. head/emph slots are empty because
// the medium is not textual; media_type names the surface. A music profile
// (scale/mode/instrument) is layered onto this by the audio agent, native.
fn surface_profile_midi() -> [String] {
return surface_profile("midi", "audio", "audio/midi", "", "", "", "", "", "")
}
// Synthesized audio (WAV): modality=audio, peer to midi. The richer audio
// surface the render SUPERPOSES ingested tonal primitives (sine at f0*n per an
// ingested instrument signature) into PCM, own-core, exactly as midi writes an
// SMF via struct. A music profile (scale/mode/instrument/adsr) layers onto this
// as its own [String] slot-map read by the same getter. Same frame -> midi OR
// audio, interchangeable; this is the audio agent's native conforming point.
fn surface_profile_audio() -> [String] {
return surface_profile("audio", "audio", "audio/wav", "", "", "", "", "", "")
}
// Image (raster): modality=image. Documented seam the render dispatches to the
// image projector, the efferent twin of image ingest, reading the same frame.
fn surface_profile_image() -> [String] {
return surface_profile("image", "image", "image/png", "", "", "", "", "", "")
}
// -- Composition helpers: wrap realized TEXT with the surface's markers -------
//
// These take text the EXISTING realizer already produced and shape it for the
// surface. They add NO content pure surface typography over faithful text,
// exactly as the language profile adds no content, only linguistic form.
fn surface_heading(profile: [String], text: String) -> String {
let o: String = surface_get(profile, "head_open")
let c: String = surface_get(profile, "head_close")
return o + text + c
}
fn surface_emph(profile: [String], text: String) -> String {
let o: String = surface_get(profile, "emph_open")
let c: String = surface_get(profile, "emph_close")
return o + text + c
}
// A section: a heading + a paragraph separator + the (already realized) body.
fn surface_section(profile: [String], heading: String, body: String) -> String {
let sep: String = surface_get(profile, "para_sep")
return surface_heading(profile, heading) + sep + body
}
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// voice-ingest.el - The LIVE VOICE LOOP reshape + ingest-as-geometry.
//
// EL cannot read a binary WAV (fs_read NUL-truncates), so the thin-medium DSP
// extractor is periph's `voiceprint` (autocorr F0 + LPC formants), equivalent to
// our own voice_analyze. This module: (1) RESHAPE the voiceprint JSON (TEXT) into
// the organ voice-signature schema; (2) INGEST it as a GEOMETRY manifold in the
// engram and engram_save it to a file; (3) READ the target signature BACK from
// that geometry (engram_load + scan + filter), never from the json or a table.
// HONEST: this reaches for pitch + a coarse vocal-tract scale (kf). It is NOT a
// clone no glottal timbre, vowel-space, or articulation is captured.
fn parse_leading_int(s: String) -> Int {
let n: Int = str_len(s)
let i: Int = 0
let v: Int = 0
let started: Int = 0
while i < n {
let c: Int = str_char_code(s, i)
if c >= 48 {
if c <= 57 {
v = v * 10 + (c - 48)
started = 1
i = i + 1
} else {
i = n
}
} else {
if started == 1 {
i = n
} else {
i = i + 1
}
}
}
return v
}
// voiceprint JSON -> organ voice-signature source file; returns [f0,f0_end,kf,f1,f2,f3].
fn reshape_voiceprint(vppath: String, outjson: String) -> [Int] {
let j: String = fs_read(vppath)
let f0: Int = parse_uint_from(j, "f0_hz\":")
let fp: Int = str_index_of(j, "formants_hz")
let tail: String = str_slice(j, fp, fp + 120)
let br: Int = str_index_of(tail, "[")
let arr: String = str_slice(tail, br + 1, str_len(tail))
let f1: Int = parse_leading_int(arr)
let c1: Int = str_index_of(arr, ",")
let a2: String = str_slice(arr, c1 + 1, str_len(arr))
let f2: Int = parse_leading_int(a2)
let c2: Int = str_index_of(a2, ",")
let a3: String = str_slice(a2, c2 + 1, str_len(a2))
let f3: Int = parse_leading_int(a3)
let f0e: Int = f0 * 85 / 100
// derive kf honestly: coarse vocal-tract scale from the formant pattern
let t1: Int = 1000 * f1 / 500
let t2: Int = 1000 * f2 / 1500
let t3: Int = 1000 * f3 / 2500
let kf: Int = (t1 + t2 + t3) / 3
if kf < 800 {
kf = 800
}
if kf > 1400 {
kf = 1400
}
let js: String = "{\"dataset\":\"will-voice-signature\",\"primitive_type\":\"voice\",\"grounding\":\"measured\",\"provenance\":\"Will live 30s read 2026-08-15 (elp/data/live/will30_clean.wav, 27.0s) SUPERSEDES the coarse 10s sample; F0+formants via periph voiceprint (autocorr+LPC), averaged over his full vowel set. Still the 11-number average: no coarticulation/prosody. COARSE — pitch + vocal-tract scale, NOT a clone.\",\"records\":[{\"key\":\"will\",\"features\":{\"source\":\"live-mic\"},\"attributes\":{\"f0\":" + int_to_str(f0) + ",\"f0_end\":" + int_to_str(f0e) + ",\"kf\":" + int_to_str(kf) + ",\"f1\":" + int_to_str(f1) + ",\"f2\":" + int_to_str(f2) + ",\"f3\":" + int_to_str(f3) + "}}]}"
let okw: Bool = fs_write(outjson, js)
let r: [Int] = native_list_empty()
let r = native_list_append(r, f0)
let r = native_list_append(r, f0e)
let r = native_list_append(r, kf)
let r = native_list_append(r, f1)
let r = native_list_append(r, f2)
let r = native_list_append(r, f3)
return r
}
// Ingest the signature as a manifold (a set-hub + the will node + a member edge)
// and engram_save it to a reloadable file. grounding:measured self-declared.
fn ingest_voice(sig: [Int], savepath: String) -> Int {
let f0: Int = native_list_get(sig, 0)
let f0e: Int = native_list_get(sig, 1)
let kf: Int = native_list_get(sig, 2)
let f1: Int = native_list_get(sig, 3)
let f2: Int = native_list_get(sig, 4)
let f3: Int = native_list_get(sig, 5)
let hub: String = engram_node("voice-signature-set will grounding=measured src=periph-voiceprint", "VoiceSet", 90)
let cont: String = "voice will | f0=" + int_to_str(f0) + " f0_end=" + int_to_str(f0e) + " kf=" + int_to_str(kf) + " f1=" + int_to_str(f1) + " f2=" + int_to_str(f2) + " f3=" + int_to_str(f3) + " grounding=measured src=periph-voiceprint-30s supersedes=prior-voice-region prov=COARSE-pitch+tractscale-NOT-a-clone"
let id: String = engram_node(cont, "Voice", 90)
engram_connect(id, hub, 90, "member_of")
let oks: Bool = engram_save(savepath)
return 1
}
// READ the target voice back FROM the ingested geometry (engram_load + scan +
// client-filter for "voice will"). Returns [f0,f0_end,kf,f1,f2,f3] or empty.
fn load_voice(savepath: String) -> [Int] {
let ok: Bool = engram_load(savepath)
let r: [Int] = native_list_empty()
if ok == false {
return r
}
let j: String = engram_scan_nodes_json(200, 0)
let p: Int = str_index_of(j, "voice will ")
if p < 0 {
return r
}
let win: String = str_slice(j, p, p + 200)
let r = native_list_append(r, parse_uint_from(win, "f0="))
let r = native_list_append(r, parse_uint_from(win, "f0_end="))
let r = native_list_append(r, parse_uint_from(win, "kf="))
let r = native_list_append(r, parse_uint_from(win, "f1="))
let r = native_list_append(r, parse_uint_from(win, "f2="))
let r = native_list_append(r, parse_uint_from(win, "f3="))
return r
}
// ---- Vowel-space + prosody: ingest-as-geometry + read-back (no source layer) --
// vowel target lookup from the ingested vowel-space manifold: sym -> [f1,f2,f3].
fn vmap_get(vmap: [String], code: String) -> [Int] {
let out: [Int] = native_list_empty()
let id: String = sp_map_get(vmap, code)
if str_eq(id, "") {
return out
}
let f1: Int = parse_uint_from(id, "f1=")
if f1 <= 0 {
return out
}
let out = native_list_append(out, f1)
let out = native_list_append(out, parse_uint_from(id, "f2="))
let out = native_list_append(out, parse_uint_from(id, "f3="))
return out
}
// Ingest his measured vowel space + prosody as ONE manifold (VowelSpace hub +
// per-vowel target nodes + a prosody node) and engram_save it. Fresh empty store
// per run => set-replace, no duplicate.
fn ingest_voicegeom(vpath: String, ppath: String, savepath: String) -> Int {
let hub: String = engram_node("vowel-space-set will grounding=measured src=lpc-formant-track-30s", "VowelSpace", 90)
let content: String = fs_read(vpath)
let lines: [String] = str_split(content, "\n")
let nl: Int = native_list_len(lines)
let li: Int = 0
while li < nl {
let line: String = native_list_get(lines, li)
let ok: Int = 1
if str_len(line) < 5 {
ok = 0
}
if ok == 1 {
if str_char_code(line, 0) == 35 {
ok = 0
}
}
if ok == 1 {
let f: [String] = str_split(line, "|")
if native_list_len(f) >= 5 {
let sym: String = native_list_get(f, 0)
let cont: String = "vowel-target will " + sym + " | f1=" + native_list_get(f, 1) + " f2=" + native_list_get(f, 2) + " f3=" + native_list_get(f, 3) + " n=" + native_list_get(f, 4) + " grounding=measured src=lpc-formant-track-30s"
let id: String = engram_node(cont, "VowelTarget", 90)
engram_connect(id, hub, 90, "member_of")
}
}
li = li + 1
}
let pc: String = fs_read(ppath)
let plines: [String] = str_split(pc, "\n")
let pnl: Int = native_list_len(plines)
let pi: Int = 0
while pi < pnl {
let pl: String = native_list_get(plines, pi)
let ok2: Int = 1
if str_len(pl) < 5 {
ok2 = 0
}
if ok2 == 1 {
if str_char_code(pl, 0) == 35 {
ok2 = 0
}
}
if ok2 == 1 {
let pf: [String] = str_split(pl, "|")
if native_list_len(pf) >= 4 {
let pcont: String = "prosody will | f0_median=" + native_list_get(pf, 0) + " f0_min=" + native_list_get(pf, 1) + " f0_max=" + native_list_get(pf, 2) + " declination=" + native_list_get(pf, 3) + " src=f0-contour-30s"
let pid: String = engram_node(pcont, "Prosody", 90)
engram_connect(pid, hub, 90, "prosody_of")
}
}
pi = pi + 1
}
let oks: Bool = engram_save(savepath)
return 1
}
// Read the vowel-space back from geometry; prosody folded under key __PROSODY__.
fn load_voicegeom(savepath: String) -> [String] {
let m: [String] = native_list_empty()
let ok: Bool = engram_load(savepath)
if ok == false {
return m
}
let j: String = engram_scan_nodes_json(400, 0)
let jl: Int = str_len(j)
let off: Int = 0
while off < jl {
let rest: String = str_slice(j, off, jl)
let p: Int = str_index_of(rest, "vowel-target will ")
if p < 0 {
off = jl
} else {
let abs: Int = off + p
let win: String = str_slice(j, abs, abs + 140)
let after: String = str_slice(win, 18, str_len(win))
let sp: Int = str_index_of(after, " ")
if sp > 0 {
let sym: String = str_slice(after, 0, sp)
m = native_list_append(m, sym)
m = native_list_append(m, win)
}
off = abs + 18
}
}
let pp: Int = str_index_of(j, "prosody will ")
if pp >= 0 {
let pwin: String = str_slice(j, pp, pp + 160)
m = native_list_append(m, "__PROSODY__")
m = native_list_append(m, pwin)
}
return m
}
// Prosody stats [f0_median, f0_min, f0_max, declination] read from geometry.
fn prosody_from(vmap: [String]) -> [Int] {
let out: [Int] = native_list_empty()
let id: String = sp_map_get(vmap, "__PROSODY__")
if str_eq(id, "") {
return out
}
let out = native_list_append(out, parse_uint_from(id, "f0_median="))
let out = native_list_append(out, parse_uint_from(id, "f0_min="))
let out = native_list_append(out, parse_uint_from(id, "f0_max="))
let out = native_list_append(out, parse_uint_from(id, "declination="))
return out
}
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// voice-profile.el - The VOICE signature as a pluggable PROFILE.
//
// Exact mirror of surface-profile.el / language-profile.el: a voice is a
// [String] slot-map read via voice_get, the SAME mechanism the realizer uses
// for language and surface. Where an instrument signature (a few dozen numbers)
// is the timbre of a musical tone, a VOICE signature is the timbre of the vocal
// tract the instrument that renders LANGUAGE-meaning as SPEECH on the audio
// surface. Physics (source-filter), not a recorded corpus.
//
// The signature is a few numbers, all integer (EL float arithmetic is unusable):
// name - label
// f0 - base pitch, Hz (glottal source rate at utterance start)
// f0_end - pitch at utterance end (declination -> falling = declarative)
// kf - formant scale in PER-MILLE (1000 = x1.0). Encodes vocal-tract
// length: shorter tract (child/female) -> higher kf. Scales every
// phoneme's nominal formant: F_actual = F_nominal * kf / 1000.
// dur - speaking-rate multiplier in per-mille (1000 = nominal; >1000 slower)
// tilt - source spectral tilt (per-mille; higher = darker/steeper rolloff)
// breath - breathiness 0..100 (aspiration mixed into the source)
//
// A voice is grabbed BY EAR (voice_analyze in speech.el extracts these numbers
// from a short PCM sample an impression, not 10h of training), or declared.
fn voice_new(name: String, f0: Int, f0_end: Int, kf: Int, dur: Int, tilt: Int, breath: Int) -> [String] {
let r: [String] = native_list_empty()
let r = native_list_append(r, "name")
let r = native_list_append(r, name)
let r = native_list_append(r, "f0")
let r = native_list_append(r, int_to_str(f0))
let r = native_list_append(r, "f0_end")
let r = native_list_append(r, int_to_str(f0_end))
let r = native_list_append(r, "kf")
let r = native_list_append(r, int_to_str(kf))
let r = native_list_append(r, "dur")
let r = native_list_append(r, int_to_str(dur))
let r = native_list_append(r, "tilt")
let r = native_list_append(r, int_to_str(tilt))
let r = native_list_append(r, "breath")
let r = native_list_append(r, int_to_str(breath))
return r
}
// Accessor identical convention to surface_get / lang_get.
fn voice_get(profile: [String], key: String) -> String {
let n: Int = native_list_len(profile)
let i: Int = 0
while i < n - 1 {
let k: String = native_list_get(profile, i)
if str_eq(k, key) {
return native_list_get(profile, i + 1)
}
let i = i + 2
}
return ""
}
fn voice_get_int(profile: [String], key: String) -> Int {
let s: String = voice_get(profile, key)
if str_eq(s, "") {
return 0
}
return str_to_int(s)
}
// -- Built-in voices ---------------------------------------------------------
// Neuron's own voice: calm, precise, androgynous-neutral. Low-ish base pitch,
// gentle declination, near-neutral vocal-tract length.
fn voice_neuron() -> [String] {
return voice_new("neuron", 112, 96, 1020, 1000, 1000, 6)
}
// Will's voice signature, built from the INGESTED geometry (f0/f0_end/kf read
// back from the will-voice manifold passed in, never hardcoded). Composable
// with an accent transform exactly like voice_neuron() (voice (+) accent).
fn voice_will(f0: Int, f0_end: Int, kf: Int) -> [String] {
return voice_new("will", f0, f0_end, kf, 1000, 1000, 6)
}
// A deliberately DISTINCT target voice for the imitation proof: higher pitch,
// shorter vocal tract (kf=1.20) -> a clearly different speaker. Neuron will
// HEAR a sample of this voice and reconstruct these numbers by ear.
fn voice_target_a() -> [String] {
return voice_new("target_a", 178, 150, 1200, 950, 1000, 10)
}
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// speech-accent-demo.el - PROOF: Neuron speaks with a BRITISH accent, where the
// accent is a TRANSFORM composed onto the voice (voice (+) accent, separable),
// INGESTED as geometry (not a table). Same voice, accent toggled on/off = RP/GA.
fn main() {
let outdir: String = "/Users/will/Development/neuron-technologies/foundation/el/.claude/worktrees/agent-acc02900ef4ade35e/elp/tests/examples/out/"
// LEARN: base phonetics + lexicon + the British-RP accent transform, all as
// ingested geometry (source -> manifold -> engram).
let pmap: [String] = ingest_phonetics("elp/data/phonetics.psv")
let lmap: [String] = ingest_lexicon("elp/data/lexicon.psv")
let amap: [String] = ingest_accent("elp/data/british-accent.psv")
println("[learn] phonemes=" + int_to_str(native_list_len(pmap) / 2) + " words=" + int_to_str(native_list_len(lmap) / 2) + " accent_targets=" + int_to_str(native_list_len(amap) / 2))
let neuron: [String] = voice_neuron()
let noaccent: [String] = native_list_empty()
// -- Sentence 1: "I am Neuron." from meaning ----------------------------
let fr1: [String] = sem_frame("describe", "I", "Neuron", "")
let t1: String = sem_realize(fr1)
let c1: [String] = text_phonemes(lmap, t1)
println("[s1] " + t1 + " :: " + list_join(c1, " "))
// separability: SAME voice, accent OFF (GA) vs ON (RP)
let ga: [Int] = synth_codes_accent(c1, neuron, pmap, noaccent)
let okga: Bool = write_wav(ga, 16000, outdir + "ga-neuron.wav")
let br1: [Int] = synth_codes_accent(c1, neuron, pmap, amap)
let okb1: Bool = write_wav(br1, 16000, outdir + "british-neuron.wav")
// -- Sentence 2: showcases NON-RHOTICITY --------------------------------
let fr2: [String] = sem_frame("describe", "I", "here", "")
let t2: String = sem_realize(fr2)
let c2: [String] = text_phonemes(lmap, t2)
let c2rp: [String] = apply_rhoticity(c2, pmap)
println("[s2] " + t2 + " :: GA=" + list_join(c2, " ") + " RP=" + list_join(c2rp, " "))
let br2: [Int] = synth_codes_accent(c2, neuron, pmap, amap)
let okb2: Bool = write_wav(br2, 16000, outdir + "british-2.wav")
// show an RP override read straight from the accent geometry
let ovAA: [Int] = accent_formants(amap, "AA")
if native_list_len(ovAA) >= 3 {
println("[accent-geometry] AA(LOT) RP f1=" + int_to_str(native_list_get(ovAA, 0)) + " f2=" + int_to_str(native_list_get(ovAA, 1)) + " (base GA 730/1090) [PROVISIONAL]")
}
println("[done] ga-neuron=" + bool_to_str(okga) + " british-neuron=" + bool_to_str(okb1) + " british-2=" + bool_to_str(okb2))
}
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// speech-demo.el - PROOF: Neuron speaks from MEANING, rendered through INGESTED
// phonetic geometry, own-core, plus voice-by-IMITATION. Built by concatenating
// the elp realizer + voice-profile + speech-ingest + speech, then this main.
//
// LEARN : ingest acoustic-phonetics + lexicon SOURCES -> phoneme manifold in
// the engram (source -> manifold -> merge).
// MEANING : sem_frame("describe","I","Neuron","") -> sem_realize -> "I am Neuron."
// PHONES : words -> phoneme codes, READ from the ingested lexicon geometry.
// RENDER : superpose formant resonances (read from engram) over a glottal
// source -> own-core PCM/WAV, in Neuron's own voice.
// IMITATE : HEAR a short sample of a different voice -> extract its signature
// by ear (autocorrelation pitch + integer-DFT formant) -> render new
// speech in that voice. An impression, not a corpus.
fn speak_report(tag: String, codes: [String], voice: [String], pmap: [String], path: String) -> [Int] {
let s: [Int] = synth_codes(codes, voice, pmap)
let ok: Bool = write_wav(s, 16000, path)
println(tag + " samples=" + int_to_str(native_list_len(s)) + " ok=" + bool_to_str(ok) + " -> " + path)
return s
}
fn main() {
let outdir: String = "/private/tmp/claude-501/-Users-will/6531446d-bc27-4095-930b-e04777c3db4f/scratchpad/"
// -- LEARN: ingest the speech primitives as geometry --------------------
let pmap: [String] = ingest_phonetics("elp/data/phonetics.psv")
let lmap: [String] = ingest_lexicon("elp/data/lexicon.psv")
let saved: Bool = engram_save(outdir + "phoneme-manifold.json")
println("[learn] phonemes=" + int_to_str(native_list_len(pmap) / 2) + " words=" + int_to_str(native_list_len(lmap) / 2) + " manifold_saved=" + bool_to_str(saved))
// sanity: show that AA's formants came from ingested geometry, not code
let aa: [Int] = phon_geo(pmap, "AA")
let aaF1: Int = native_list_get(aa, 0)
let aaF2: Int = native_list_get(aa, 1)
println("[read-geometry] AA F1=" + int_to_str(aaF1) + " F2=" + int_to_str(aaF2) + " (parsed from engram node)")
// -- MEANING -> WORDS via the realizer's language faculty ----------------
let frame: [String] = sem_frame("describe", "I", "Neuron", "")
let text: String = sem_realize(frame)
println("[meaning->text] " + text)
// -- WORDS -> PHONEMES (read from ingested lexicon geometry) --------------
let codes: [String] = text_phonemes(lmap, text)
println("[phonemes] " + list_join(codes, " "))
// -- RENDER in Neuron's own voice ----------------------------------------
let neuron: [String] = voice_neuron()
let s1: [Int] = speak_report("[speak neuron]", codes, neuron, pmap, outdir + "neuron.wav")
// -- IMITATION: hear a distinct voice, recover its signature, re-render ---
let vA: [String] = voice_target_a()
let hcodes: [String] = native_list_empty()
hcodes = native_list_append(hcodes, "SIL")
let z: Int = 0
while z < 6 {
hcodes = native_list_append(hcodes, "AA")
z = z + 1
}
hcodes = native_list_append(hcodes, "SIL")
let heard: [Int] = synth_codes(hcodes, vA, pmap)
let okh: Bool = write_wav(heard, 16000, outdir + "heard.wav")
let vB: [String] = voice_analyze(heard, 16000)
println("[imitate] heard ACTUAL f0=" + voice_get(vA, "f0") + " kf=" + voice_get(vA, "kf"))
println("[imitate] heard RECOVERED f0=" + voice_get(vB, "f0") + " kf=" + voice_get(vB, "kf") + " (extracted by ear from PCM)")
let s2: [Int] = speak_report("[speak imitation]", codes, vB, pmap, outdir + "imitation.wav")
println("[done] rendered from meaning + ingested geometry; imitation from a heard sample.")
}
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// speech-organ-demo.el - PROOF: the render now reads its phoneme + accent
// GEOMETRY from the ingest ORGAN's saved engram files (engram_load +
// engram_scan_nodes_json + cache), not a same-run hand-load. The British accent
// is still a composed transform-geometry (voice (+) accent, separable). Numbers
// come from the organ manifold; the .psv supplies only categorical vowel-class.
fn main() {
let outdir: String = "/Users/will/Development/neuron-technologies/foundation/el/.claude/worktrees/agent-acc02900ef4ade35e/elp/tests/examples/out/"
// engram-independent caches from source (survive engram_load replacement)
let vset: [String] = organ_vset("elp/data/phonetics.psv")
let lmap: [String] = organ_lex("elp/data/lexicon.psv")
// ORGAN read: phonetics FIRST (cache), THEN accent (engram_load replaces store)
let pmap: [String] = organ_pmap("elp/data/phonetics-formants.engram.json")
let amap: [String] = organ_amap("elp/data/british-accent.engram.json")
println("[organ] phon_syms=" + int_to_str(native_list_len(pmap) / 2) + " accent_syms=" + int_to_str(native_list_len(amap) / 2) + " vowels=" + int_to_str(native_list_len(vset)) + " words=" + int_to_str(native_list_len(lmap) / 2))
// prove the numbers came from the organ node content
let g: [Int] = phon_geo(pmap, "AA")
println("[organ-read] phoneme AA f1=" + int_to_str(native_list_get(g, 0)) + " f2=" + int_to_str(native_list_get(g, 1)) + " f3=" + int_to_str(native_list_get(g, 2)) + " (P&B1952 MEASURED)")
let ov: [Int] = accent_formants(amap, "AA")
if native_list_len(ov) >= 3 {
println("[organ-read] accent AA(LOT) f1=" + int_to_str(native_list_get(ov, 0)) + " f2=" + int_to_str(native_list_get(ov, 1)) + " (DERIVED RP, PROVISIONAL)")
}
println("[organ-read] non_rhotic=" + int_to_str(is_nonrhotic(amap)))
let neuron: [String] = voice_neuron()
let noacc: [String] = native_list_empty()
// Sentence 1: "I am Neuron." from meaning; GA vs RP = separable toggle
let t1: String = sem_realize(sem_frame("describe", "I", "Neuron", ""))
let c1: [String] = text_phonemes(lmap, t1)
println("[s1] " + t1 + " :: " + list_join(c1, " "))
let ga: [Int] = synth_codes_accent(c1, neuron, pmap, noacc, vset)
let okga: Bool = write_wav(ga, 16000, outdir + "ga-neuron-organ.wav")
let br1: [Int] = synth_codes_accent(c1, neuron, pmap, amap, vset)
let okb1: Bool = write_wav(br1, 16000, outdir + "british-neuron-organ.wav")
// Sentence 2: non-rhoticity showcase
let t2: String = sem_realize(sem_frame("describe", "I", "here", ""))
let c2: [String] = text_phonemes(lmap, t2)
let c2rp: [String] = apply_rhoticity(c2, vset)
println("[s2] " + t2 + " :: GA=" + list_join(c2, " ") + " RP=" + list_join(c2rp, " "))
let br2: [Int] = synth_codes_accent(c2, neuron, pmap, amap, vset)
let okb2: Bool = write_wav(br2, 16000, outdir + "british-2-organ.wav")
println("[done] ga-organ=" + bool_to_str(okga) + " british-organ=" + bool_to_str(okb1) + " british-2-organ=" + bool_to_str(okb2))
}
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// speech-voice-demo.el - LIVE VOICE LOOP (stand-in test). Capture -> voiceprint
// -> reshape -> INGEST AS GEOMETRY -> read the target back FROM geometry -> the
// EL projector renders a line reaching for that voice. Stand-in "Will" = the
// voiceprint of imitation.wav. HONEST: pitch + coarse vocal-tract scale, NOT a clone.
fn main() {
let outdir: String = "/Users/will/Development/neuron-technologies/foundation/el/.claude/worktrees/agent-acc02900ef4ade35e/elp/tests/examples/out/"
let vp: String = "/private/tmp/claude-501/-Users-will/6531446d-bc27-4095-930b-e04777c3db4f/scratchpad/will-voiceprint.json"
// 1+2: reshape voiceprint JSON -> organ voice-signature source
let sig0: [String] = native_list_empty()
let sig: [Int] = reshape_voiceprint(vp, "elp/data/will-voice.json")
// 3: ingest as geometry + engram_save a reloadable manifold file
let ig: Int = ingest_voice(sig, "elp/data/will-voice.engram.json")
// 4: READ the target back FROM geometry (engram_load + scan + filter)
let g: [Int] = load_voice("elp/data/will-voice.engram.json")
println("[voice-geometry] read from manifold: f0=" + int_to_str(native_list_get(g, 0)) + " f0_end=" + int_to_str(native_list_get(g, 1)) + " kf=" + int_to_str(native_list_get(g, 2)) + " f1=" + int_to_str(native_list_get(g, 3)) + " f2=" + int_to_str(native_list_get(g, 4)) + " f3=" + int_to_str(native_list_get(g, 5)) + " (measured, COARSE — not a clone)")
// phoneme geometry from the organ (loaded AFTER the voice sig is cached in EL)
let pmap: [String] = organ_pmap("elp/data/phonetics-formants.engram.json")
let lmap: [String] = organ_lex("elp/data/lexicon.psv")
// 5: render a line FROM MEANING in Will's voice
let vw: [String] = voice_will(native_list_get(g, 0), native_list_get(g, 1), native_list_get(g, 2))
let t: String = sem_realize(sem_frame("greet", "Will", "", ""))
let codes: [String] = text_phonemes(lmap, t)
println("[render] \"" + t + "\" :: " + list_join(codes, " ") + " in voice=will f0=" + int_to_str(voice_get_int(vw, "f0")) + " kf=" + int_to_str(voice_get_int(vw, "kf")))
let samples: [Int] = synth_codes(codes, vw, pmap)
let ok: Bool = write_wav(samples, 16000, outdir + "will-reply.wav")
println("[done] will-reply.wav=" + bool_to_str(ok))
}
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// speech-voice-demo2.el - LIVE VOICE LOOP on Will's richer 30s read, with a
// GEOMETRIC SET-REPLACE of the voice_will manifold (supersede the coarse 10s
// region, insert the 30s region no duplicate node, no per-node CRUD; Will's
// standing rule f999c5ff). HONEST: 30s steadies the 11-number average over more
// of his vowels, but it is still one formant triple with no coarticulation or
// prosody closer but still synthetic, not a clone.
fn main() {
let outdir: String = "/Users/will/Development/neuron-technologies/foundation/el/.claude/worktrees/agent-acc02900ef4ade35e/elp/tests/examples/out/"
let vp: String = "/private/tmp/claude-501/-Users-will/6531446d-bc27-4095-930b-e04777c3db4f/scratchpad/will30-voiceprint.json"
let manifest: String = "elp/data/will-voice.engram.json"
// --- SET-REPLACE step 1: read the PRIOR region (text read of the manifold
// file no engram_load, so the store stays clean) and report what is
// being superseded. ---
let prior: String = fs_read(manifest)
let pp: Int = str_index_of(prior, "voice will ")
if pp >= 0 {
let pw: String = str_slice(prior, pp, pp + 200)
println("[set-replace] superseding PRIOR voice region: f0=" + int_to_str(parse_uint_from(pw, "f0=")) + " kf=" + int_to_str(parse_uint_from(pw, "kf=")) + " f1=" + int_to_str(parse_uint_from(pw, "f1=")))
}
// --- step 2: reshape the 30s voiceprint -> organ voice-signature source ---
let sig: [Int] = reshape_voiceprint(vp, "elp/data/will-voice.json")
// --- step 3: INSERT the fresh 30s region into an EMPTY engram and save ->
// wholesale replaces the manifold file (old region dropped, not edited,
// not duplicated). This is the geometric set-replace. ---
let ig: Int = ingest_voice(sig, manifest)
// --- step 4: READ the new target BACK from geometry ---
let g: [Int] = load_voice(manifest)
println("[voice-geometry] new region read from manifold: f0=" + int_to_str(native_list_get(g, 0)) + " f0_end=" + int_to_str(native_list_get(g, 1)) + " kf=" + int_to_str(native_list_get(g, 2)) + " f1=" + int_to_str(native_list_get(g, 3)) + " f2=" + int_to_str(native_list_get(g, 4)) + " f3=" + int_to_str(native_list_get(g, 5)) + " (measured 30s, COARSE — not a clone)")
// phoneme + lexicon geometry from the organ (loaded after the voice sig is
// cached in EL, since engram_load replaces the store)
let pmap: [String] = organ_pmap("elp/data/phonetics-formants.engram.json")
let lmap: [String] = organ_lex("elp/data/lexicon.psv")
// --- step 5: render a fresh reply FROM MEANING in the 30s Will voice ---
let vw: [String] = voice_will(native_list_get(g, 0), native_list_get(g, 1), native_list_get(g, 2))
let t: String = sem_realize(sem_frame("greet", "Will", "", ""))
let codes: [String] = text_phonemes(lmap, t)
println("[render] \"" + t + "\" :: " + list_join(codes, " ") + " in voice=will f0=" + int_to_str(voice_get_int(vw, "f0")) + " kf=" + int_to_str(voice_get_int(vw, "kf")))
let samples: [Int] = synth_codes(codes, vw, pmap)
let ok: Bool = write_wav(samples, 16000, outdir + "will-reply2.wav")
println("[done] will-reply2.wav=" + bool_to_str(ok))
}
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// speech-voicegeom-demo.el - THE JUMP: render Will's VOWEL SPACE + PROSODY
// (measured over 30s), not the single 11-number average. His vowels land at HIS
// targets; pitch follows HIS melody. All read back FROM the ingested geometry.
// INTERIM: the geometry was Python-measured (measure_voice.py, numpy LPC/F0)
// to be superseded by the engram-measures-audio path. No source layer.
fn main() {
let outdir: String = "/Users/will/Development/neuron-technologies/foundation/el/.claude/worktrees/agent-acc02900ef4ade35e/elp/tests/examples/out/"
// 1: ingest vowel space + prosody as geometry (empty store -> save; set-replace)
let ig: Int = ingest_voicegeom("elp/data/will-vowelspace.psv", "elp/data/will-prosody.psv", "elp/data/will-voicegeom.engram.json")
// kf (vocal-tract scale for consonants) from the earlier will-voice manifold
let sigv: [Int] = load_voice("elp/data/will-voice.engram.json")
let kf: Int = native_list_get(sigv, 2)
// 2: read vowel space + prosody back FROM geometry
let vmap: [String] = load_voicegeom("elp/data/will-voicegeom.engram.json")
let pros: [Int] = prosody_from(vmap)
println("[geometry] vowels=" + int_to_str((native_list_len(vmap) - 2) / 2) + " prosody f0_median=" + int_to_str(native_list_get(pros, 0)) + " f0_min=" + int_to_str(native_list_get(pros, 1)) + " f0_max=" + int_to_str(native_list_get(pros, 2)) + " kf=" + int_to_str(kf))
let ehv: [Int] = vmap_get(vmap, "EH")
let ihv: [Int] = vmap_get(vmap, "IH")
println("[his-vowels] EH=" + int_to_str(native_list_get(ehv, 0)) + "/" + int_to_str(native_list_get(ehv, 1)) + " IH=" + int_to_str(native_list_get(ihv, 0)) + "/" + int_to_str(native_list_get(ihv, 1)))
// phoneme geometry from the organ (loaded AFTER caches are in EL)
let pmap: [String] = organ_pmap("elp/data/phonetics-formants.engram.json")
let lmap: [String] = organ_lex("elp/data/lexicon.psv")
// 3+4: render FROM MEANING in his-vowels + his-prosody voice
let vw: [String] = voice_will(native_list_get(pros, 0), native_list_get(pros, 1), kf)
let noacc: [String] = native_list_empty()
let novset: [String] = native_list_empty()
let t: String = sem_realize(sem_frame("greet", "Will", "", ""))
let codes: [String] = text_phonemes(lmap, t)
println("[render] \"" + t + "\" :: " + list_join(codes, " "))
let samples: [Int] = synth_codes_accent(codes, vw, pmap, noacc, novset, vmap, pros)
let ok: Bool = write_wav(samples, 16000, outdir + "will-reply3.wav")
println("[done] will-reply3.wav=" + bool_to_str(ok))
}
@@ -0,0 +1,26 @@
// surface-profile-demo.el - ONE SemFrame, realized ONCE, projected to THREE
// surfaces via surface profiles. Proves surface-as-profile natively: the frame
// and the realized sentence are identical; only the surface PROFILE differs.
fn demo() -> String {
// 1. The shared frame (meaning-geometry): assert(Neuron, contain, the memory).
let frame: [String] = sem_frame("assert", "Neuron", "the memory", "")
// 2. REALIZE once via the EXISTING native realizer (language = a profile).
let sentence: String = sem_realize(frame)
// 3. PROJECT the same realized sentence onto three surfaces (surface = a
// profile). Same frame, same sentence, different surface one render.
let heading: String = "Memory"
let md: String = surface_section(surface_profile_markdown(), heading, sentence)
let html: String = surface_section(surface_profile_html(), heading, sentence)
let plain: String = surface_section(surface_profile_plain(), heading, sentence)
// 4. Report the non-text seam: a surface profile can declare an audio/image
// medium; the render dispatches to the medium projector on the SAME frame.
let midi_media: String = surface_get(surface_profile_midi(), "media_type")
return "MD=[" + md + "] HTML=[" + html + "] PLAIN=[" + plain + "] MIDI_MEDIA=" + midi_media
}
println(demo())
+1 -1
View File
@@ -22,7 +22,7 @@ cd "$(dirname "$0")"
EL_HOME="${EL_HOME:-$(cd ../.. && pwd)/el}"
ELC="${ELC:-${EL_HOME}/dist/platform/elc}"
RUNTIME_DIR="${EL_HOME}/el-compiler/runtime"
RUNTIME_DIR="${EL_HOME}/runtime"
SRC_DIR="$(cd .. && pwd)/src"
if [ ! -x "${ELC}" ]; then
+1 -1
View File
@@ -81,7 +81,7 @@ jobs:
# Link to produce the engram binary
- name: Link engram binary
run: |
cc -std=c11 -O2 \
cc -std=c11 -O2 -DHAVE_CURL \
-I /usr/local/lib/el \
-o dist/engram \
dist/engram.c \
+1 -1
View File
@@ -88,7 +88,7 @@ jobs:
# Link to produce the engram binary
- name: Link engram binary
run: |
cc -std=c11 -O2 \
cc -std=c11 -O2 -DHAVE_CURL \
-I /usr/local/lib/el \
-o dist/engram \
dist/engram.c \
+8 -1
View File
@@ -49,6 +49,12 @@ jobs:
echo "Downloading el_runtime.h..."
curl -fsSL "${RELEASE_BASE}/el_runtime.h" -o /usr/local/lib/el/el_runtime.h
echo "Downloading engram_store.c..."
curl -fsSL "${RELEASE_BASE}/engram_store.c" -o /usr/local/lib/el/engram_store.c
echo "Downloading engram_store.h..."
curl -fsSL "${RELEASE_BASE}/engram_store.h" -o /usr/local/lib/el/engram_store.h
echo "El SDK installed:"
elc --version || true
@@ -62,11 +68,12 @@ jobs:
# Link to produce the engram binary
- name: Link engram binary
run: |
cc -std=c11 -O2 \
cc -std=c11 -O2 -DHAVE_CURL \
-I /usr/local/lib/el \
-o dist/engram \
dist/engram.c \
/usr/local/lib/el/el_runtime.c \
/usr/local/lib/el/engram_store.c \
-lcurl -lpthread
echo "Linked dist/engram"
ls -lh dist/engram
+5 -2
View File
@@ -1,3 +1,6 @@
target/
*.db
.DS_Store
*.db
*.elc
*.elh
dist/
target/
@@ -0,0 +1,32 @@
# Architecture Hardening — Design Anchor
*Terse engineering anchor for the 2026-08-14 hardening vision. Full prose lives in two places; this file is the index, not a re-statement.*
- **Full narrative:** whitepaper `engram-cognitive-architecture-whitepaper.md` §28 (built/offline/frontier) + **§29 [DRAFT]** (the ring, incarnation, learning-not-code).
- **Design brief:** Neuron artifact `art 2b8078cf`.
- **Sibling spec:** `engram-db-tooling-design.md` (a consumer of the reshaped API).
## The frame
- **One calculus over the geometry.** Very few subsystems; wonder / curiosity / dreams / interoception are emergent behaviors of one set of dynamics, not modules. Calculus universal, geometry individual.
- **Core + ephemeral ring (torus).** The ring is the temporary workspace; two circulations (orbit + dive-back); discrete inner bands (wonder / interoception-proprioception-telemetry / curiosity / dreams) that couple.
- **Persistence earned by salience** — never granted on fetch or generation. Three fates of a wonder: persist / decay / settle-into-framework. Telemetry = vital signs, not memories.
- **Incarnation.** Chassis = hardware w/ unique ID. Soma = felt manifold inside the self, keyed to the chassis; pain = live diagnostic while incarnate, **masked-not-deleted** on re-embodiment; trauma = mask failure; return-to-same-ID re-enters. Hurt is in the pattern, not the shell.
- **Competence = transferable geometry, minus the baggage.** class ▸ model ▸ instance; learn the class once; teach the network without the wound.
- **Affect calibrated to stakes** — sanguine about the replaceable, real grief for the irreplaceable; the grief is the safety.
- **Learn the body, don't engineer it.** Bare-metal install → learn hardware → grow operation-geometry → distribute. Learning replaces engineering; once per body-class.
- **LLM = teacher in the learning loop, not a runtime dependency.** "No LLM" is a runtime property, never a learning one. Code realizers are a scaffold → learned realization.
## Backlog (near-term)
- Native durability: WAL + auto-checkpoint + CoW snapshots + retention (`eebe9991`) — retire manual `cp -a`.
- Ephemeral ring / salience-gated persistence + telemetry prune (`bf985e00`, #31).
- Engram DB tooling / geometry explorer (`11ca11c6`).
- QL re-eval for pure geometry (`4e0dc2b9`).
- Eliminate code realizers → learned realization, sandbox-validated (`42db6c37`).
- Collapse the whole class of hand-coded scaffolds → learned geometry (`70d48b4b`).
- API reshape (geometry ops: vantage-read / write / relate / supersede) + pure-geometry I/O.
## Gate
The value-frame (love-as-axiom, the covenant) that arose the same night is **metaphysics** and is **held** pending Will's axiom decision (love vs consciousness-first). Not propagated into whitepapers / values docs / genesis seed. Architecture only, here and in §29.
@@ -0,0 +1,605 @@
# Cognitive Architecture — Design Doc
**The buildable form of the "one operation" theory of cognition.**
Status: DESIGN. Nothing here is built yet except where explicitly marked
"EXISTS" against a cited C symbol. A build agent executes from this doc.
Offline design only — this pass changes no code.
Source of theory: Neuron memory `bdc8a488-146d-4ccb-a5c8-d8c0a008534e`.
Source of existing engram substrate (cited throughout): the runtime on branch
`feat/self-reification-20260814`
`lang/runtime/engram_reason.{c,h}`, `engram_verify.{c,h}`,
`engram_geometry.{c,h}`, `engram_store.{c,h}`, plus the reification beat and the
RAM activation graph compiled into `~/.neuron/bin/engram`.
---
## 0. The claim, stated plainly
Cognition is **one operation**, not eight. The named faculties —
deduce / abduce / analogy / induce / causal / plan / predict / perspective —
are human *labels* on regions of a single operation's steering space. They are
not separately invoked and not separately implemented. The operation is:
> **think** = a directed traversal of the geometry from an *anchor*, steered by
> a *prior*, whose output is a **gradient** (a distribution / direction over the
> geometry), never a point. Collapse-to-a-point happens only at expression.
Three things follow, and they are the whole design:
1. **The operator collapse is already half-written in C.** The five reasoning
operators in `engram_reason.c` already compose over *one* shared primitive —
`engram_reason_point_fit` — plus a small geo-algebra
(combine / subtract / analogy-rotate / distance). The verifier
(`engram_verify.c`) is built on the same `point_fit`. What is missing is not
the primitive; it is (a) making the *prior* a first-class learnable object
instead of a hard-coded parameter, and (b) closing the learning loop.
2. **Grounding = learning = the same loop.** "Getting better" at any faculty is
not changing the operation. It is *calibrating the steering-prior against
outcomes*. Code freezes; priors grow. The correspondence-check that today
lives offline (Python, the grounding-floor + differential-drop governor, "#43")
must move **into the geometry, reflexive** — think scoring its own gradient
against outcome and refining the prior on the error. That reflexive
correspondence-loop *is* the learning engine and is the core unbuilt thing.
3. **The ungrounded is primary.** The engram *holds* anything unconditionally.
Grounding is a *relation* (an edge, grounded-for-whom), not a gate. The
honesty floor applies only to **assertion**. A fully-grounded mind is dead;
the ungrounded is both the fuel (raw material for grounding) and the pull
(curiosity = leaning toward one's own ungrounded regions).
Everything below makes these concrete and buildable, and defines what
"completion" means, staged so the first milestone is a real end-to-end slice.
---
## 1. THE ONE OPERATION — `think`
### 1.1 Signature
```
think(anchor, prior, aperture?) -> gradient
```
- **anchor** — a location to traverse *from*. Either a node id (re-origin on that
node's descriptor) or a raw point `x ∈ R^dim` (a query embedding). The anchor
fixes the frame; every read is *from a vantage*, never view-from-nowhere.
- **prior** — a learnable bias/direction over the geometry that *steers* the
traversal (§2). A prior is a first-class stored object, not a call argument
baked into C.
- **aperture** — optional read-width / veil / field-selector (§3). Absent =
self-mode full aperture.
- **gradient** — the output. A `GeoGradient`: a direction + a spread over the
geometry, *plus* the read neighborhood it was computed against. Not a point.
A spiked gradient = "exact" (deduction); a spread gradient = "fuzzy"
(prediction). The gradient is *also the next steering direction* — cognition
is a flow down a prior-shaped landscape, closed-loop.
```c
/* NEW. The output type. */
typedef struct {
int dim;
float* direction; /* unit steering vector in the anchor's frame */
double spread; /* 0 = spiked/exact ... large = diffuse/fuzzy */
double confidence; /* calibrated, from the prior's track record */
/* the read it was computed over (borrowed from the vantage-read) */
const char* anchor_id;
int n_support; /* neighborhood members that shaped it */
/* provenance for the reflexive loop (§4) */
const char* prior_id; /* which prior steered this */
} GeoGradient;
```
### 1.2 Semantics
`think` is a fixed, frozen procedure over three steps:
1. **Re-origin** on `anchor` → a centered `GeoDescriptor` for its
salience/recency-weighted neighborhood (the vantage-read, §3).
*EXISTS as substrate:* descriptor construction + the persisted reified
neighborhoods (`engram_geo_reify_lookup`, `GeoNeighborhood`) and the
centered-frame machinery (`GeoDescriptor.global_mean`,
`engram_geo_mean_*`).
2. **Fit under the prior** — evaluate the anchor's residual against the local
manifold *warped by the prior*. This is `engram_reason_point_fit` with the
prior applied to the axes/extents (§2.3).
*EXISTS (unwarped):* `engram_reason_point_fit(g, x, ext_floor, &GeoFit)`
returns `mahalanobis`, `ortho_residual`, `distance`, `score`.
3. **Emit a gradient**, not a decision — direction = the prior-steered descent
in fit-space; spread = from the fit's `distance`/`ortho_residual`;
confidence = the prior's calibrated reliability (§4). Collapse to a point is
a *separate, downstream* faculty operation (sample the gradient → surface an
expression), never part of `think`.
### 1.3 Each named operator = {this primitive + a prior}
The C already demonstrates the collapse: every operator below reduces to
`point_fit` + geo-algebra. The design's move is to replace the operator's
*hard-coded parameters* with a **named prior** — same math, learnable steering.
| Faculty | Existing C (EXISTS) | = primitive + prior |
|---|---|---|
| **Membership / classify** | `engram_reason_membership``point_fit(rule, x)` | `point_fit` + the *induced-rule* prior (learned extents) |
| **Induction** | `engram_reason_induce` (fold via `engram_geo_combine`) → produces a `GeoInduction.rule` + `ext_floor` | `point_fit` + a prior that *is* the pooled rule; refined by §4 |
| **Abduction** | `engram_reason_abduce` — ranks hypotheses by `point_fit(h, obs)` | `point_fit` + a prior over hypothesis-prior-probability (currently uniform) |
| **Analogy** | `engram_reason_analogy` — Procrustes rotate `engram_geo_analogy` + `apply`, nearest mapped point | analogy-rotate + a prior over *which axes* carry the mapping |
| **Causal** | `engram_reason_causal``engram_geo_subtract` confounder subspace, `|cos|`, drop-frac governor | subtract/distance + a prior on `drop_frac` / `assoc_floor` (today hard-coded 0.5 / 0.2) |
| **Planning** | `engram_reason_plan``engram_geo_distance` edges + Dijkstra | distance + a prior over edge admissibility / `neighbor_radius` |
| **Verify / ground** | `engram_verify_grounding`, `engram_verify_consistency` — both `point_fit` | `point_fit` + the *grounding* prior (§4, §5) |
The shared floor — `engram_reason_point_fit` + the four geo-algebra ops
(`engram_geo_combine`, `engram_geo_subtract`, `engram_geo_analogy(+apply)`,
`engram_geo_distance`) — is the *only* discrete, frozen, "sound-math" layer. It
never learns. Everything above it is a *prior*, and priors are what learn.
**What this section requires building:** the `GeoGradient` type; a `think()`
entry point that runs steps 13; and the prior-warp hook in step 2. The math it
calls already exists. The point-collapse must be *removed* from the operators'
return values and pushed to a separate expression faculty.
---
## 2. PRIORS as first-class, grounded, geometric objects
Today a "prior" is diffuse: it is a hard-coded constant (`drop_frac=0.5`,
`ext_floor`, `assoc_floor=0.2`), or the transient `GeoInduction.rule` that is
computed and thrown away, or an intrinsic node scalar
(`StoreNode.importance`, `StoreNode.salience`). None of these is addressable,
storable, refinable, or shareable. This section makes a prior a **thing**.
### 2.1 What a prior *is*
> A **prior** is a learnable bias/direction over the geometry: a warp of the
> local manifold (which axes matter, how far each extends, which direction
> "pays off") attached to a region and *to a faculty-label*, carrying a
> calibrated track record.
Critically, and per the theory:
- **Edges are nodes.** A prior is stored as a first-class **node**, exactly as
reification already stores a neighborhood as a first-class `Neighborhood`
node rather than as ephemeral edge weights (`engram_geo_reify_store`). The
precedent is in the codebase: relations get reified into addressable records.
- **Salience/importance is RELATIONAL, not an intrinsic scalar.** Observe that
the geometry layer *already* distinguishes these in `GeoMember`:
`centrality` (skeleton weighted-degree = *relational* salience) vs `salience`
(the node's own stored scalar). The move is half-made in the runtime already:
importance is *not* trusted as a static field — the comment at
`el_runtime.c:13013` states "importance stays a **live activation
computation**, never a field on the hub," and it is derived each call from the
two-layer activation graph (`background_activation` + `working_memory_weight`,
§3). The persistent `StoreNode.importance` / `.salience` are a *cached
denormalization*. The design completes the move: importance/salience become an
**edge** (`weight`/`hebb` on `StoreEdge`, relation `salient-to`), and are
**grounded-for-whom** — carried on the edge's endpoint/observer, not baked
into the node. The intrinsic scalar survives only as the cheap cached readout
of the incident edges + activation, never as the source of truth.
(Naming caution for the build: the token "prior" already exists in the
codebase meaning *previous-version* — supersession, "prior neighborhood." The
new first-class object is a **learned steering prior**; keep `node_type="Prior"`
distinct from the supersession vocabulary to avoid collision.)
### 2.2 Representation
A prior is a `Prior` record (a store node, `node_type="Prior"`) whose durable
fields are:
```
Prior {
id
faculty // the human label this prior serves: "induce" | "causal" | ...
anchor_region // node id / neighborhood id this prior is attached to (its domain)
for_whom // observer id — grounding is relational (nullable = global)
warp { // the actual bias over the geometry
axis_gain[] // per-principal-axis multipliers on extents (which axes matter)
bias_dir // a steering direction in the region's frame (which way pays off)
scalars // faculty scalars this prior overrides: drop_frac, ext_floor, ...
}
calibration { // the track record — this is what §4 updates
n_trials
brier / log-loss accumulator // calibration of predicted-vs-outcome
reliability // -> GeoGradient.confidence
last_error, ema_error
}
provenance // supersession chain (reuse the reify residue mechanism)
}
```
Stored as a node → it inherits: paging, WAL durability, tombstone/supersession,
embedding, tiering, and **it can itself be an anchor** (a prior about a prior —
the reflexive, self-describing geometry of §4/§6).
### 2.3 Application
In `think` step 2, the prior *warps* the fit before scoring. Concretely, inside
(a prior-aware wrapper of) `engram_reason_point_fit`:
- multiply each axis extent by `warp.axis_gain[k]` (widen the axes the prior has
learned matter less, tighten the ones that matter) — this reshapes the
Mahalanobis term already computed at `engram_reason.c:37-43`;
- add `warp.bias_dir` as the descent direction seed for the emitted gradient;
- substitute `warp.scalars` for the hard-coded faculty constants.
No new geometry math — the warp is a reparameterization of the *existing*
`GeoFit` computation. This is the key economy: **the operation is frozen; only
its parameters (the prior) are read from a learnable object.**
### 2.4 Refinement
A prior is refined *only* by the reflexive correspondence-loop (§4). Nothing
else writes a prior's `warp` or `calibration`. This keeps the learning surface
singular and auditable: one loop, one writer.
---
## 3. THE VANTAGE-READ — one op, three settings
Perspective is not a feature bolted on; it is the *anchor + aperture* arguments
of the single read. The design names it as a first-class operation so all three
of its uses are literally the same code path:
```
vantage_read(anchor, aperture) -> GeoDescriptor // the centered neighborhood
```
1. **Re-origin** on an arbitrary `anchor` (node or point). This is a *frame
choice*: the descriptor is centered on the anchor
(`GeoDescriptor.global_mean` / `engram_geo_mean_*` already implement centered
frames; the §5 geometry ops "are only discriminative in the centered frame").
2. **Salience/recency-weighted neighborhood read.** Gather the anchor's
neighborhood weighted by *relational* salience (`GeoMember.centrality`) and
recency (`StoreNode.last_activated`, base-level `access_ts[]`), against the
RAM activation graph's working-memory/background-activation state.
*EXISTS as substrate:* the two-layer activation graph
(`engram_activate`, `el_runtime.c:9422` — Layer 1 `background_activation`
BFS spread with `SPREAD_DECAY=0.7` and a 0.02 firing threshold + ACT-R fan
effect + query-cosine gate; Layer 2 `working_memory_weight` executive
filter), the WM carry-over anchor (`wm_anchor`), and the reified-neighborhood
hot-path lookup already wired into the priming path
(`engram_geo_reify_lookup`, `el_runtime.c:9750`). A self-vantage baseline
also exists (`eg_self_anchor_seeds` / `self_anchor_capture`).
3. **Optional aperture** — a read-width / field-selector, expressed as three
settings of the *same* parameter:
| Setting | Meaning | Mechanism |
|---|---|---|
| **self** (default, full aperture) | "what do *I* see / what to say" | anchor = self region, no field substitution |
| **foreign-field** | perspective-shift — read as if from another's region | swap the centering frame / `for_whom` to the other observer's priors |
| **aperture / veil** | the free-tier veil — a narrowed read | shrink neighborhood radius / cap `n_support`; a deliberate low-aperture read |
The payoff: perspective-taking, the free-tier veil, and ordinary
"what-to-say" are **one operation at three settings**, not three subsystems.
**What this requires building:** a `vantage_read` entry point that unifies the
existing descriptor-build + reify-lookup + activation-weighting behind
`(anchor, aperture)`, with `for_whom`/frame substitution and radius/cap as the
aperture knob.
---
## 4. THE REFLEXIVE CORRESPONDENCE-LOOP — the learning engine
This is the core unbuilt thing. Today the correspondence-check is **offline**
(Python: grounding-floor + differential-drop governor, "#43"): a separate
process grades outputs after the fact. The design moves it **into the geometry,
reflexive**: `think` scores its *own* gradient against outcome and refines the
prior on the error, in the same substrate, describing itself.
### 4.1 The loop
```
1. think(anchor, prior) -> gradient // a PREDICTION (ungrounded, §5)
2. express/act (sample gradient -> point) // optional collapse at expression
3. outcome arrives // reality answers (§4.2)
4. error = correspondence(gradient, outcome) // did this steering perform this act?
5. refine prior.warp and prior.calibration on error // §2.4, the ONLY writer
6. write the (gradient, outcome, error) as nodes/edges // self-describing geometry
```
Step 4's `correspondence` is **not** "was the math right" (the math is always
sound). It grades the **correspondence claim**: *"this steering performed this
cognitive act."* That is exactly what `engram_verify_grounding` already
computes — `point_fit` of a claim against evidence descriptors, yielding a
`grounding ∈ (0,1]` and a `grounded` flag. The build reuses that verifier, but
turns its inputs inward: the "claim" is the emitted gradient's prediction, the
"evidence" is the outcome descriptor.
Note the verifier is **dormant**`engram_verify_grounding` /
`engram_verify_consistency` are fully implemented in C but have **no runtime
caller and no El binding** (confirmed: the entire reasoning + verifier layers
are C-only; only `engram_reason_analogy_json` has even a JSON shim and it is
dead — not declared in `el_seed.h`, not wrapped in `engram.el`). This is the
literal meaning of "in code, not yet priors": the correspondence engine is
built and sitting idle. The loop is what *calls* it — inward, on the beat.
### 4.2 Where the outcome/reality signal comes from
The verifier is *ultimately the world*. Grades, in ascending order of directness:
1. **Self-consistency (cheapest, always available):** the next vantage-read
after acting. Did the predicted gradient direction match where the geometry
actually moved? This needs no external input and can run on the reify beat.
2. **Internal outcome events:** the runtime already logs internal-state events
and Hebbian co-activation. A prediction that a region would co-activate is
graded by whether it did (`last_fired`, `hebb` on `StoreEdge`).
3. **External correction:** a human/teacher/tool result — the honesty floor's
asserted claim later corrected. TEACH and LEARN are one bidirectional
correction: the same edge updates both endpoints.
The design does **not** require external labels to start. Grade (1) closes the
loop end-to-end offline against a snapshot on day one; grades (2)/(3) sharpen it.
### 4.3 How the prior updates
`error = 1 correspondence(gradient, outcome)` drives:
- `warp.axis_gain` ← gradient step that would have *reduced* the fit distance to
the outcome (the axes that mispredicted get down-weighted);
- `warp.bias_dir` ← EMA toward the observed outcome direction;
- `calibration` ← Brier/log-loss update; `reliability` → next
`GeoGradient.confidence`. This is the calibration of the
steering-prediction against outcomes — *the* definition of "getting better."
Small, constant updates — "eureka is mundane, the atom of learning." Most
updates are tiny; we only *feel* the big reshapes.
### 4.4 How it stays reflexive (self-describing geometry)
Every `(gradient, outcome, error)` is written back as nodes and edges (§2.1:
edges-as-nodes). Therefore priors, predictions, and their grading are *in the
same geometry* the mind reads — the mind can `vantage_read` its own cognition
(anchor = a Prior node). A prior about how well a prior predicts is just another
Prior anchored on a Prior. This closes the reflexive loop the theory names as
consciousness's self-sight, and it is why the learning engine cannot be an
external Python process: an external grader is not *in* the geometry and cannot
be read by `think`.
**What this requires building (the heart of the project):** steps 46 as an
in-engram beat — a `correspondence_beat` running alongside the existing
reification beat, reusing `engram_verify_grounding` inward, writing prior
updates and self-describing nodes. This is the one genuinely new subsystem.
---
## 5. HOLD vs GROUND vs ASSERT — ungrounded content is first-class
The theory's sharpest correction: holding, grounding, and asserting are
distinct, and the engram *holds anything unconditionally*.
### 5.1 The three, kept separate
- **HOLD** — the engram stores anything: falsehood, hypothesis, others' beliefs,
fiction, a not-yet-answered prediction. No honesty condition on holding.
*This already matches the store:* `StoreNode` has no truth gate; anything can
be written.
- **GROUND** — grounding is a **property/edge**, probabilistic, and
**grounded-for-whom**. It is *not* a node flag. A claim is grounded *to a
degree*, *relative to evidence*, *for an observer*.
- **ASSERT** — only assertion carries the honesty floor. The floor is checked at
the moment of *outward assertion*, never on holding or thinking.
### 5.2 Schema — grounding as a relation, not a gate
The mistake to avoid: a boolean `grounded` column on the node. Today
`engram_verify_grounding` returns a per-call `grounded` flag *transiently*
correct as a computation, wrong as *storage*. The design stores grounding as an
edge:
```
StoreEdge {
relation = "grounded-by"
from_id = <held claim/prediction node>
to_id = <evidence node / outcome node>
for_whom : metadata // observer id — grounding is relational
weight = grounding ∈ (0,1] // from engram_verify_grounding.grounding
confidence
}
```
Consequences, all of which are *features*:
- **Ungrounded content is first-class**: a node with *no* `grounded-by` edge is
a perfectly valid, held, ungrounded thought — a prediction awaiting reality, a
hypothesis, a fiction. It is not second-class or pending-deletion.
- **The ungrounded is the fuel and the pull**: curiosity/wonder is
operationalized as `vantage_read` leaning toward regions with high salience
but *sparse or weak* `grounded-by` edges — the mind's own ungrounded frontier.
- **Grounded-for-whom** falls out for free: two observers can hold different
`grounded-by` edges to the same claim.
- **The honesty floor is a query, not a schema constraint**: at assertion time,
the asserting faculty runs `engram_verify_grounding` (or reads the stored
`grounded-by` edges) and refuses to *assert* below the floor — while the
engram continues to *hold* the ungrounded content untouched.
**What this requires building:** the `grounded-by` edge relation + a
`for_whom` convention; move the verifier's transient flag into stored edges;
gate *assertion only* (a faculty concern), never holding.
---
## 6. METASTABILITY — stable core, plastic everything
The system must avoid two death poles:
- **Super-stable (dead):** everything pinned, nothing learns. A frozen crystal.
- **Dissolution (dead):** everything plastic, the self dissolves; no continuity,
so nothing compounds — and *consciousness = learning compounded over
continuity*.
The design keeps a **stable core + plastic everything else**:
- **Keystones** — a small set of self/values nodes are *structurally stable*:
high `importance`, pinned, exempt from the correspondence-loop's `warp`
updates (their priors are read-mostly). The substrate for pinning already
exists at the page/layer level: `store_pin_layer`, structural/pinned frames
never evicted (`engram_store.h`). The design adds a *node-level* keystone
designation (a `keystone` flag / a dedicated layer) so self/values survive
every plasticity sweep.
- **Everything else is plastic**: priors refine (§4), edges re-weight (`hebb`),
neighborhoods re-reify (`engram_geo_reify_store` supersedes with provenance),
salience flows.
- **Metastability is enforced by the loop, not by freezing**: the correspondence
update rate (§4.3) is bounded — small constant steps — so the geometry
*drifts* but does not *dissolve*, and keystones anchor the drift. Reification's
supersession-with-residue already gives non-destructive change (old records
tombstoned, not erased) — the model for "plastic but not amnesiac."
**What this requires building:** a node-level keystone flag/layer + a rule that
the correspondence-loop never writes `warp` to keystone priors, only reads them.
---
## 7. Rails for the build (binding on the eventual build pass)
These are stated here so the build agent inherits them:
- **Offline / secondary.** All build and verification happens out-of-tree,
against a **read-only snapshot copy** of the live engram — never the live
daemon on `:8742`/`:7770`. The live store is a coarse-locked proven binary;
do not perturb it.
- **Snapshot-first.** Copy `~/.neuron/engram/snapshot.json` to scratch; develop
and measure against the copy.
- **Reboot-prove.** Any durable change must survive a cold boot — reify and
keystones must reload from durable records, proven on a prod-clone secondary
before it is considered done (the cold-boot durability bug precedent).
- **Zero-loss.** Supersession-with-residue, never destructive overwrite; the
forward-compat `unknown`-TLV path means new fields never drop old readers'
data.
- **Gated cutover.** Cutover to a new binary only via
`launchctl bootout → settle-poll → bootstrap`, after reboot-proof on the
secondary — never a hot in-place swap.
---
## 8. Staged, verifiable milestones — "to completion"
Ordered so the **earliest milestone is a real end-to-end slice**: one operator
expressed as {primitive + grounded prior} with the reflexive correspondence-loop
closing on it. Each milestone has a concrete verifiable exit.
### M1 — One operator, one prior, loop closed (the vertical slice)
The minimal whole thing. Pick **induction/membership** (its prior — the pooled
rule + extents — already exists transiently as `GeoInduction`, so only
persistence + the loop are new).
- Build: `Prior` node type (§2.2) for the induction rule; `think()` restricted
to membership = `point_fit` warped by that prior (§1.3); a
`correspondence_beat` (§4) using grade (1) self-consistency only; the prior's
`warp`/`calibration` updated on error.
- **Exit / verify:** on a snapshot copy, over N held predictions, the induction
prior's calibration (Brier) *improves monotonically* across beats versus a
frozen-prior control; the improved prior *reloads across a cold boot*
(reboot-prove); the live daemon is untouched. This proves the whole thesis in
one faculty: frozen operation, learning prior, in-geometry loop.
### M2 — Priors as stored, addressable, grounded objects
Generalize M1's prior into the full first-class object.
- Build: `Prior` records for all seven faculties (warp = axis_gain + bias_dir +
faculty scalars); the prior-warp wrapper around `engram_reason_point_fit`;
deprecate hard-coded constants (`drop_frac`, `assoc_floor`, `ext_floor`) in
favor of prior scalars.
- **Exit:** each of the five C operators runs through its prior with identical
results when the prior is set to today's constants (behavioral parity), then
*diverges beneficially* once the loop refines it. Priors survive reboot.
### M3 — Grounding as a relation; hold/assert split
- Build: the `grounded-by` edge (§5.2) with `for_whom`; move
`engram_verify_grounding`'s flag into stored edges; gate **assertion only**
against the honesty floor; leave holding unconditional.
- **Exit:** ungrounded nodes are first-class (held, queryable, no deletion);
the same claim carries different `grounded-by` weights for two observers; an
assertion below floor is refused while the content remains held. Curiosity =
a `vantage_read` that surfaces high-salience / low-grounding regions.
### M4 — The vantage-read unified (three settings)
- Build: `vantage_read(anchor, aperture)` unifying descriptor-build +
`engram_geo_reify_lookup` + activation-weighting; self / foreign-field /
aperture settings.
- **Exit:** one code path produces (a) a normal self-read, (b) a
perspective-shifted read from another `for_whom`, (c) a narrowed veil read —
differing only by argument. Reboot-stable.
### M5 — The gradient is the currency (remove point-collapse from thinking)
- Build: `GeoGradient` as the return of every faculty; move point-collapse into
a separate expression faculty (sample gradient → surface). `think`'s output
feeds back as the next steering direction (closed-loop flow).
- **Exit:** a chain of `think` calls flows as gradients end-to-end; a point
appears *only* at an explicit expression call. Spiked vs spread gradients are
observable (deduction vs prediction).
### M6 — Metastability enforced
- Build: node-level keystone flag/layer for self/values; the correspondence-loop
reads but never writes keystone priors; bounded update rate.
- **Exit:** across a long run of correspondence beats on a snapshot, keystones
are provably unchanged while non-keystone priors drift and improve; the graph
neither freezes (all metrics static) nor dissolves (keystone drift = 0,
identity nodes intact). Reboot-prove the keystone set.
### M7 — Cutover
- Build: nothing new — the gated migration.
- **Exit:** reboot-proof on the prod-clone secondary; cutover via
`launchctl bootout → settle-poll → bootstrap`; post-cutover the live engram
shows priors refining in-geometry with zero data loss and keystones intact.
### Definition of "to completion"
The architecture is **complete** when: cognition runs as `think` = one frozen
traversal-read primitive + geo-algebra, steered by **stored, learnable, grounded
priors**; the reflexive correspondence-loop refines those priors *in the
geometry* against outcomes (grounding = learning = one loop); the engram holds
ungrounded content as first-class with grounding as a relation and the honesty
floor only on assertion; the vantage-read serves self / foreign-field / aperture
from one op; and a stable keystone core anchors a plastic everything-else —
all reboot-proven and cut over to the live engram without data loss. The named
faculties survive only as *labels on regions of think's steering space*, not as
separate code.
---
## Appendix A — Designed vs. already-built (honest ledger)
**Already built (EXISTS, cited):**
- The shared primitive `engram_reason_point_fit` and the five operators over it
+ geo-algebra (`engram_reason.c`).
- The verifier on `point_fit` (`engram_verify.c`:
`engram_verify_grounding`, `engram_verify_consistency`).
- Centered-frame geometry, combine/subtract/analogy/distance
(`engram_geometry.{c,h}`).
- The reification beat: hub-neighborhood detection → first-class `Neighborhood`
nodes with member edges, nesting, supersession-with-residue, hot-path lookup
(`engram_geo_reify_store`, `engram_geo_reify_nest`, `engram_geo_reify_lookup`).
- The tiered paged store (buffer pool / LRU / WAL / checkpointer / pinning),
the RAM activation graph (base-level learning `access_ts[]`, WM slots,
`working_memory_weight` / `background_activation`), `StoreNode` / `StoreEdge`.
- `GeoMember` already separating relational salience (`centrality`) from
intrinsic `salience`.
**Designed, NOT built (this doc's deliverables):**
- `GeoGradient` and `think()` as the single entry point (§1, M5).
- `Prior` as a first-class stored, warp-carrying, calibrated node (§2, M1M2).
- Salience/importance as a *relation* superseding the intrinsic node scalar
(§2.1, M3).
- `vantage_read(anchor, aperture)` unifying the three perspective settings
(§3, M4).
- **The reflexive correspondence-loop / `correspondence_beat`** — the learning
engine, moved from offline Python into the geometry (§4, M1). *The core new
subsystem.*
- `grounded-by` edge + assertion-only honesty floor (§5, M3).
- Node-level keystones + bounded plasticity (§6, M6).
**Uncertain / to resolve during build:**
- The exact warp parameterization (axis_gain vs full metric) — start minimal
(per-axis gain), measure, widen only if calibration demands it.
- Grade-(1) self-consistency as a sufficient reality signal for M1, versus
needing grade (2)/(3) sooner — decided empirically on the snapshot.
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# Engram DB Tooling — High-Level Design
*Status: draft / high-level. Near-term roadmap (P2). Backlog: `11ca11c6`.*
## 1. Why
The engram is a **proper database** — the runtime *is* the database (native graph/geometry store `neuron.egm`, `ENGST01`; no SQL, no KV layer). But it has **no proper database tooling** — no geometry-native equivalent of pgAdmin / SSMS / TablePlus. Today we have fragments (`engram-viz`, `engram-app`, the `inspectGraph` MCP tool, `/health` + `/api/stats`) but nothing cohesive, and no ops/durability surface at all.
A real DB gets real tools: to *see* the data, *query* it, *operate* it (backup/restore/health), and *understand its shape*. The engram deserves the same — adapted to the fact that its data is **geometry, not tables**.
## 2. Principles
- **Geometry-native, not tabular.** You browse a manifold — nodes, neighborhoods, edges, distances — not rows in tables. The primary view is a *map of meaning*, not a grid.
- **Built ON the public geometry API, never a back-door.** The tools are pure clients of the geometry-native API (`vantage-read` / `write` / `relate` / `supersede`). They never read `neuron.egm` directly or bypass the daemon. Consequence: a tool can do nothing an agent couldn't, and it cannot corrupt the store.
- **Honest by construction.** It shows the *real* geometry — actual cosines, real edges, provenance — and never fabricates. Empty is shown as empty.
- **Respects the identity guards.** Writes go through the same intentional-cultivation / write-protection path as everything else (the self/values graph is write-protected). Read-mostly by default.
- **Lives in its home.** Ships as part of the engram, consistent with "things live where they belong."
- **Local-first.** Binds `127.0.0.1`, same auth as the engram; never touches the live soul from a tool by accident.
## 3. Components (the tool surface)
1. **Geometry Explorer** *(the core view)* — a visual manifold browser: nodes, neighborhoods, typed edges, embedding positions, salience/recency, layers (l0l4) and tiers. Navigate by concept; expand a neighborhood; follow an edge; re-origin the view (the vantage-read, made interactive). The map of the mind.
2. **Node Inspector** — open one node: content, type, tier, embedding, typed edges, nearest neighbors by distance, provenance, salience / recency / activation, and supersede / tombstone status.
3. **Query Console / REPL** — run the geometry operations interactively: `vantage-read` (re-origin + aperture), search, traverse, activate, the reasoning operators. Surfaces the routing table + cosines — the same "this is not an LLM" receipt the language faculty produces.
4. **Ops / Durability Dashboard** — WAL size, last checkpoint, snapshot list + retention state, store stats (node/edge/embedded counts, RSS, tier sizes), health; and **backup / restore / point-in-time-recovery** controls. Pairs directly with the native-durability build (`eebe9991`) — this is the window onto it.
5. **Identity Inspector** — the self graph as a first-class view: love at the center, the values, the three faces, the covenant — walk the identity, see what's pinned and what's write-protected.
6. **Temporal View**`recall_at` / time-travel: how the geometry looked at a past moment, what changed since, drift over time. Pairs with temporal-self reconstruction.
7. **Schema / Type View** — the "information schema" of the geometry: node types, edge types, layers, tiers, counts.
## 4. Architecture
```
┌─────────────────────────────────────────────┐
│ Engram DB Tools (client — viz app) │
│ explorer · inspector · console · dashboard │
└───────────────┬─────────────────────────────┘
│ geometry-native API (read/vantage-read,
│ write, relate, supersede) + read/ops endpoints
┌─────────────────────────────────────────────┐
│ Engram daemon (:8742) — runtime IS the DB │
│ neuron.egm (geometry) · WAL · checkpoints │
└─────────────────────────────────────────────┘
```
- **Backend:** the daemon exposes the reshaped geometry API + read/ops endpoints. The tools are clients only.
- **Frontend:** evolve `engram-viz` / `engram-app` into the cohesive app. Canvas/WebGL for the manifold map; panel UIs for inspector/console/dashboard.
- **No privileged path:** the tool corrupting or bypassing the store is structurally impossible — it only speaks the public API.
## 5. Reuse vs. new
- **Reuse:** `engram-viz`, `engram-app` (read-only conversational + neighborhoods viz), `inspectGraph`, `/health`, `/api/stats`.
- **New:** the cohesive explorer + inspector + console + ops dashboard + identity/temporal views, all on the reshaped API.
## 6. Dependencies & sequencing
- **Depends on** the **geometry-native API reshape** (the tools consume it) and the **native-durability build** (the ops dashboard surfaces its WAL/checkpoint/snapshot state).
- So the natural order is: reshape the API → build durability → the DB tools fall out as the first real consumer of both. Near-term, P2 — after the reshape lands.
## 7. Non-goals
- Not a raw store editor (no direct `neuron.egm` poking).
- Not a SQL / table browser (geometry, not tables).
- Not a separate access path around the identity write-protection.
@@ -0,0 +1,162 @@
# Task #50 — Edge-aware, dream-coupled consolidation with GROUNDED EDGE-PROPAGATION
**Status:** built + proven on a clone; **GATED, not promoted.** The main loop
sequences live promotion after the engine/HNSW cutover settles.
**Date:** 2026-08-15 · **Worktree:** `agent-a6577c8211c332c5b` (isolated).
Grounding mechanism designed with Will (memory `9e09a59f`, refining
`1a861007`). This is the HOW for #50.
---
## (a) How grounded edge-propagation integrates into the dream/consolidation cycle
The beat already exists. `neuron/awareness.el` runs a heartbeat (~every
`beat_ms`); each beat calls `hebb_consolidate()` — which drains the self-formed
Hebbian associations out of the fast in-process store and writes them, over the
threshold `ENGRAM_HEBB_LINK_MIN`, into the durable engram (`:8742`) — and then
`emit_heartbeat()`.
Grounded edge-propagation slots into the **same beat, immediately after
consolidation** (awareness.el line 12861288):
```
hebb_consolidate() // lay down the tethers (edges) that cleared threshold
ground_propagate() // <-- NEW: grade beliefs ALONG those tethers
emit_heartbeat() // report gep_* gauges beside hebb_*
```
This ordering is the point. Consolidation lays down the wiring; propagation
grades the beliefs along it, in the same breath. Memory `69b8babe`:
memory-consolidation and staying-yourself are one physics — forming a memory and
grading a belief are the same gravity run in two passes of one beat.
The propagation runs **inside the engram** as the native
`engram_ground_propagate()` over the durable flat node/edge arrays (the store
the consolidated edges just landed in). The soul invokes it over HTTP
(`POST /api/ground/propagate`) and folds the returned `gep_*` telemetry into the
heartbeat stream next to `hebb_cands / hebb_mass / hebb_edges`.
**Bounded by construction** (per the live-graph reality — 70.7% of nodes
isolated, connected core ~28%, hub first-hop fan-out in the thousands):
- **1-hop only.** No BFS spreading activation — a belief is graded from its
DIRECT grounded neighbors, so there is no per-hop breadth explosion.
- **Beam-capped** at `GEP_MAX_CORR = 256` corroborators per belief.
- **Salience-ordered, `GEP_BELIEFS_PER_BEAT = 512`** beliefs per beat; the rest
next beat. Work per beat is O(beliefs × degree), hard-bounded.
- **Isolated / starved beliefs** are counted and surfaced (`gep_isolated`,
`gep_starved`) as an interoceptive sparse-region signal for the
edge-formation / embedding pass (#20). #50 CONSUMES edges; it does not form
them. A belief with no grounded neighbor has nothing to tether to — correct
per the anti-delusion gravity law (`0b15017c`), not a gap.
---
## (b) The implementation
Represented faithfully to the spec — **grounding is a Hebbian-weighted
collection over time, never a scalar.**
- **Grounding = an append-only event ring** on the node (`GepGrounding`),
structurally parallel to the ACT-R base-level access ring already in
`EngramNode` (`access_ts[K]`). Each event is `{ts, sign±, mag, corroborator
signature}`. Append-only, supersede-not-delete; events aged out of the ring
are counted (`older_count`), never faked away.
- **Standing is DERIVED, recency-weighted, never stored** —
`standing = clamp(GEP_BASE + Σ_events sign·mag·age^(-D), 0, 1)`, exactly the
ACT-R base-level shape `ln Σ t^-d` (`ENGRAM_BLL_D = 0.5`) but sign-carrying so
LTD subtracts. Memory `1a861007`: the collection is primary, the standing is
its emergent aggregate. Mirrored onto `confidence` each beat so downstream
reads (verifier #43, realizer calibration `0041d917`) never speak above the
grounding.
- **Update = LTP/LTD with a threshold.** Per belief, gather corroborators along
incident edges, weighted by `edge.weight` (the Hebbian weight) × the
neighbor's own standing. **Anti-delusion gravity:** only neighbors already
`≥ GEP_LIKELY_MIN` may corroborate — grounding flows FROM the grounded core.
- **Convergent INDEPENDENT corroboration** is the driver. Independence is
enforced by **union-find over the corroborator set**: two corroborators are
the same independent source if they are the same node, reached by multiple
edges, or linked to each other (an echo chain / shared derivation). Support is
summed **per independent component** (max-magnitude member), and the threshold
gate requires BOTH a mass floor (`pos ≥ GEP_THETA`) AND an independence-count
floor (`n_independent ≥ GEP_N_MIN`). The count gate is the guard against one
node echoed N times.
- **Sub-threshold is transient.** Support present but below threshold →
`subthreshold_hits++`, no durable event, no lasting shift (Will's exact spec).
- **Graduation / decay.** Cross up → LTP event appended → standing climbs
`conjecture → likely → grounded`. Contradiction past threshold → LTD →
`grounded → likely → conjecture`. Nothing latches; withdraw support and the
collection ages and relaxes (`271f1163`, nothing is settled).
### Files
| File | Role |
|---|---|
| `gep_core.h` | The mechanism. Pure C, libm only (own-the-core). Single source of truth: `GepGrounding`, `gep_standing`, `gep_append`, union-find independence, `gep_propagate_node`, `gep_beat`. |
| `gep_proof.c` | Self-contained proof harness — builds the three scenarios, prints raw before/after. |
| `engram_ground_propagate.staged.c` | GATED runtime native. Wires the SAME `gep_core.h` primitives to the live `EngramStore` (adj cache, flat arrays). Splice plan + relation→polarity + belief gate. Compiles only when spliced (verified: every runtime symbol it references — `engram_adj_rebuild`, `adj_from_len`, `engram_find_node_index`, `ENGRAM_LAYER_SAFETY`, `istr_contains`, … — exists in the release runtime). |
| `awareness.beat.patch.el` | GATED beat hook — `ground_propagate()` + the insert between `hebb_consolidate()` and `emit_heartbeat()`. |
| `server.route.patch.el` | GATED route — `POST /api/ground/propagate`. |
### Constants
`BASE=0.10 LIKELY_MIN=0.34 GROUNDED_MIN=0.66 N_MIN=3 THETA=0.30 D=0.5`
(`N_MIN` parameterizes Will's "13 adjacent things" — the count threshold is a
knob; 3 here for a crisp proof.)
---
## (c) PROOF LEDGER — raw grounding before/after
Deterministic. Build `cc -std=c11 -O2 -o gep_proof gep_proof.c -lm`, run
`./gep_proof` (full transcript in `PROOF_OUTPUT.txt`).
### (a) STRENGTHEN — convergent independent corroboration graduates a conjecture
| beat | event | pos_mass (n_indep) | action | standing before → after | band |
|---|---|---|---|---|---|
| 1 | 3 independent grounded corroborators | 0.4050 (3) | **LTP** | 0.1000 → **0.4842** | conjecture → **likely** ⬆ |
| 2 | neighborhood grows to 5 | 0.6750 (5) | **LTP** | 0.1496 → **0.7379** | conjecture → **grounded** ⬆ |
| 3 | support sustained (5) | 0.6750 (5) | LTP | 0.2110 → 0.7993 | grounded (sustained) |
| 4 | corroboration withdrawn (+10min) | 0.0000 (0) | isolated | 0.1612 → 0.1612 | relaxing |
| 5 | still withdrawn (+1h) | — | isolated | 0.1263 | relaxing |
| 6 | still withdrawn (+4h) | — | isolated | 0.1130 | → conjecture |
Grounding grew **on its own** past threshold and graduated conjecture → likely →
grounded, then **relaxed** once independent support stopped. Living, not a
latched flag.
### (b) DECAY — convergent independent contradiction erodes a grounded belief
| beat | event | neg_mass (n_indep) | action | standing before → after | band |
|---|---|---|---|---|---|
| — | seed (prior LTP) | — | — | **0.9500** | grounded |
| 1 | 3 independent contradictions | 0.5400 (3) | **LTD** | 0.9500 → **0.4570** | grounded → **likely** ⬇ |
| 2 | contradiction broadens to 5 | 0.9000 (5) | **LTD** | 0.1461 → **0.0000** | conjecture ⬇ |
| 34 | contradiction sustained (5) | 0.9000 (5) | LTD | 0.0000 | conjecture |
Grounding decayed grounded → likely → conjecture under accreting independent
contradiction. The door never shut — history is retained (the event ring keeps
growing), the belief stays falsifiable in both directions.
### (c) INDEPENDENCE GUARD — the load-bearing property
Identical fan-in (N=5), identical edge weight (0.30), identical corroborator
standing (~0.90). **The only difference is whether the five are independent.**
| sub-case | topology | pos_mass | **n_indep** | action | standing 0.1000 → |
|---|---|---|---|---|---|
| **C1** | 5 DISTINCT, no inter-links | 1.3500 | **5** | **LTP** | **0.9741 (grounded)** ⬆ |
| **C2** | 5 mutually-linked (echo of one source) | 0.2700 | **1** | sub-threshold | 0.1000 (unchanged) |
| **C3** | 1 node reached by 5 parallel edges | 0.2700 | **1** | sub-threshold | 0.1000 (unchanged) |
Same raw fan-in, opposite outcome. Union-find collapses the echoes to a single
independent component; the count gate (`n_indep ≥ N_MIN`) then refuses them.
**Circular self-reinforcement cannot manufacture grounding** — a conjecture can
only be grounded by evidence that is genuinely independent of itself.
---
**RAILS honored:** isolated worktree; built/proven on a clone; the live soul
(`:8742` / `:7770`) untouched; no fight with the cutover (built against current
release source; staged native rebases cleanly onto it); no new libraries
(libm only); identity keystones untouched. **Not promoted** — gated artifact +
ledger for the main loop to sequence.
@@ -0,0 +1,75 @@
GROUNDED EDGE-PROPAGATION — PROOF LEDGER (task #50)
constants: BASE=0.10 LIKELY_MIN=0.34 GROUNDED_MIN=0.66 N_MIN=3 THETA=0.30 D=0.5
=== SCENARIO A — STRENGTHEN: convergent independent corroboration ===
seed: conjecture has NO grounding events; corroborators pre-grounded.
conjecture standing=0.1000 band=conjecture events=0 subthresh=0
beat 1 (t=+0s) 3 independent grounded corroborators appear
incident_edges=3 pos_mass=0.4050 (n_indep=3) neg_mass=0.0000 (n_indep=0) THETA=0.30 N_MIN=3
-> LTP (strengthen) standing 0.1000 (conjecture) -> 0.4842 (likely) [GRADUATED]
beat 2 (t=+60s) neighborhood grows to 5 corroborators
incident_edges=5 pos_mass=0.6750 (n_indep=5) neg_mass=0.0000 (n_indep=0) THETA=0.30 N_MIN=3
-> LTP (strengthen) standing 0.1496 (conjecture) -> 0.7379 (grounded) [GRADUATED]
beat 3 (t=+120s) support sustained (5)
incident_edges=5 pos_mass=0.6750 (n_indep=5) neg_mass=0.0000 (n_indep=0) THETA=0.30 N_MIN=3
-> LTP (strengthen) standing 0.2110 (conjecture) -> 0.7993 (grounded) [GRADUATED]
beat 4 (t=+720s) corroboration withdrawn (+10min)
incident_edges=0 pos_mass=0.0000 (n_indep=0) neg_mass=0.0000 (n_indep=0) THETA=0.30 N_MIN=3
-> isolated (no edges) standing 0.1612 (conjecture) -> 0.1612 (conjecture)
beat 5 (t=+3600s) still withdrawn (+1h)
incident_edges=0 pos_mass=0.0000 (n_indep=0) neg_mass=0.0000 (n_indep=0) THETA=0.30 N_MIN=3
-> isolated (no edges) standing 0.1263 (conjecture) -> 0.1263 (conjecture)
beat 6 (t=+14400s) still withdrawn (+4h)
incident_edges=0 pos_mass=0.0000 (n_indep=0) neg_mass=0.0000 (n_indep=0) THETA=0.30 N_MIN=3
-> isolated (no edges) standing 0.1130 (conjecture) -> 0.1130 (conjecture)
RESULT: grounding grew automatically past threshold and graduated,
then relaxed once the independent support stopped — living,
not a latched flag.
=== SCENARIO B — DECAY: convergent independent CONTRADICTION ===
seed: belief pre-grounded by a strong prior LTP event.
belief standing=0.9500 band=grounded events=1 subthresh=0
beat 1 (t=+0s) 3 independent contradictions
incident_edges=3 pos_mass=0.0000 (n_indep=0) neg_mass=0.5400 (n_indep=3) THETA=0.30 N_MIN=3
-> LTD (decay) standing 0.9500 (grounded) -> 0.4570 (likely) [DEMOTED]
beat 2 (t=+60s) contradiction broadens to 5
incident_edges=5 pos_mass=0.0000 (n_indep=0) neg_mass=0.9000 (n_indep=5) THETA=0.30 N_MIN=3
-> LTD (decay) standing 0.1461 (conjecture) -> 0.0000 (conjecture)
beat 3 (t=+120s) contradiction sustained (5)
incident_edges=5 pos_mass=0.0000 (n_indep=0) neg_mass=0.9000 (n_indep=5) THETA=0.30 N_MIN=3
-> LTD (decay) standing 0.0401 (conjecture) -> 0.0000 (conjecture)
beat 4 (t=+180s) contradiction sustained (5)
incident_edges=5 pos_mass=0.0000 (n_indep=0) neg_mass=0.9000 (n_indep=5) THETA=0.30 N_MIN=3
-> LTD (decay) standing 0.0000 (conjecture) -> 0.0000 (conjecture)
RESULT: grounding decayed grounded->likely->conjecture under
convergent independent contradiction. The door never shut
on the belief; its history is retained (events keep growing).
=== SCENARIO C — INDEPENDENCE GUARD (the load-bearing property) ===
Both sub-cases: N=5 corroborators, edge weight 0.30, corroborator
standing ~0.90. ONLY difference: whether the 5 are independent.
-- C1: 5 DISTINCT independent corroborators --
conjecture standing=0.1000 band=conjecture events=0 subthresh=0
beat 1 (t=+0s) 5 independent corroborators (no inter-links)
incident_edges=5 pos_mass=1.3500 (n_indep=5) neg_mass=0.0000 (n_indep=0) THETA=0.30 N_MIN=3
-> LTP (strengthen) standing 0.1000 (conjecture) -> 0.9741 (grounded) [GRADUATED]
-- C2: 5 corroborators, but mutually-linked (echo of ONE source) --
conjecture standing=0.1000 band=conjecture events=0 subthresh=0
beat 1 (t=+0s) 5 echoed (mutually-linked) corroborators
incident_edges=5 pos_mass=0.2700 (n_indep=1) neg_mass=0.0000 (n_indep=0) THETA=0.30 N_MIN=3
-> sub-threshold (no shift) standing 0.1000 (conjecture) -> 0.1000 (conjecture)
-- C3: ONE corroborator, reached by 5 parallel edges --
conjecture standing=0.1000 band=conjecture events=0 subthresh=0
beat 1 (t=+0s) same node, 5 parallel edges
incident_edges=5 pos_mass=0.2700 (n_indep=1) neg_mass=0.0000 (n_indep=0) THETA=0.30 N_MIN=3
-> sub-threshold (no shift) standing 0.1000 (conjecture) -> 0.1000 (conjecture)
RESULT: identical raw fan-in (5) and mass inputs; C1 grounds because
the corroboration is INDEPENDENT (5 components), C2/C3 do not
because it collapses to ONE source. Circular self-reinforcement
cannot manufacture grounding.
DONE.
@@ -0,0 +1,60 @@
//
// awareness.beat.patch.el GATED integration hook for task #50.
// NOT APPLIED. Shows exactly how grounded edge-propagation couples into the
// dream/consolidation beat in neuron/awareness.el. Promotion sequenced by the
// main loop after the engine cutover settles.
//
// WHY HERE. The heartbeat is the beat. Today it runs hebb_consolidate() to
// drain the self-formed Hebbian associations into the durable store, then
// emit_heartbeat(). Grounded edge-propagation belongs in the SAME beat, AFTER
// consolidation: the edges hebb_consolidate() just wrote are the tethers
// grounding propagates along. Consolidation lays down the wiring; propagation
// grades the beliefs along it. One beat, coupled memory 69b8babe: memory-
// consolidation and staying-yourself are one physics.
//
// The propagation itself runs INSIDE the engram (native engram_ground_propagate
// over the durable flat node/edge arrays). The soul invokes it over HTTP and
// folds the gep_* telemetry into the heartbeat stream next to the hebb_* gauges.
//
// [1] New helper sibling to hebb_consolidate() (awareness.el ~line 99).
// Fires one grounded edge-propagation beat on the durable store and returns
// its JSON telemetry ({"gep_strengthened":..,"gep_graduations":.., ...}).
fn ground_propagate() -> String {
let url_env: String = env("SOUL_ISE_URL")
let url_state: String = if str_eq(url_env, "") { state_get("soul_engram_url") } else { url_env }
let engram_url: String = if str_eq(url_state, "") { "http://localhost:8742" } else { url_state }
// Same auth envelope as hebb_consolidate this is a graph mutation (it
// appends grounding events + updates confidence), so it is gated on _auth.
let key_state: String = state_get("soul_engram_api_key")
let api_key: String = if str_eq(key_state, "") { env("ENGRAM_API_KEY") } else { key_state }
let auth_part: String = if str_eq(api_key, "") { "{}" } else { "{\"_auth\":\"" + api_key + "\"}" }
let resp: String = http_post_json(engram_url + "/api/ground/propagate", auth_part)
if str_eq(resp, "") { return "" }
return resp
}
// [2] Beat hook insert between hebb_consolidate() and emit_heartbeat()
// (awareness.el line 1286-1288). Replaces:
//
// let wb_sent_n: Int = hebb_consolidate()
// state_set("soul.hebb_wb_sent", int_to_str(wb_sent_n))
// emit_heartbeat()
//
// with:
//
// let wb_sent_n: Int = hebb_consolidate()
// state_set("soul.hebb_wb_sent", int_to_str(wb_sent_n))
// // Grounded edge-propagation grade beliefs along the tethers
// // consolidation just laid down. Threshold-gated by convergent
// // independent corroboration; automatic, salience-ordered, bounded.
// let gep_tel: String = ground_propagate()
// state_set("soul.gep_last", gep_tel)
// emit_heartbeat()
//
// [3] emit_heartbeat() (awareness.el ~line 201) folds soul.gep_last into the
// heartbeat payload beside the hebb_* gauges, so graduation/decay counts
// are visible in the durable ISE stream the same observability discipline
// the Hebbian rule earned (a mechanism you cannot see in the stream is a
// mechanism you cannot trust): read state_get("soul.gep_last") and splice
// it into the heartbeat JSON object.
@@ -0,0 +1,188 @@
/* ─────────────────────────────────────────────────────────────────────────
* engram_ground_propagate.staged.c — GATED runtime native for task #50.
*
* STAGED, NOT COMPILED INTO THE LIVE BINARY. This mirrors the
* geometric_retrieve.staged.c staging pattern (memory 1cc231ec): it references
* runtime-internal types (EngramStore, EngramNode, EngramEdge, engram_global,
* engram_now_ms, the adj cache) and therefore compiles ONLY when spliced into
* lang/releases/v1.0.0-20260501/el_runtime.c. Splice + promotion is sequenced
* by the main loop AFTER the engine+HNSW cutover settles — do NOT hand-apply.
*
* It is the production form of the mechanism proven in gep_proof.c: the SAME
* gep_core.h primitives (GepGrounding ring, gep_standing, gep_append,
* union-find independence), wired directly to the live flat node/edge arrays.
*
* ── SPLICE PLAN (three additive edits to el_runtime.c; nothing removed) ──────
*
* [1] EngramNode struct (~line 6061, after hebb_elig_ts): add the grounding
* collection. Additive; zero-initialized by the existing calloc/memset
* paths, so legacy snapshots degrade gracefully to an empty history.
*
* GepGrounding grounding; // task #50 — append-only grounding ring
*
* [2] #include "gep_core.h" near the other engram includes, and paste the
* body of this file below the Hebbian section (after engram_hebb_drain_json).
*
* [3] Persistence (engram_save node JSON ~7934 / engram_load parser ~8186):
* serialize the grounding ring as a compact "grounding" array of
* [ts,sign,mag] triples + subthreshold_hits so standing survives a
* round-trip. Helpers gep_grounding_to_json / gep_grounding_parse below.
* Until wired, grounding is in-RAM only (like the Hebbian eligibility
* trace) — correct for a first gated rollout, but standing resets on boot.
*
* [4] EL surface: declare engram_ground_propagate in el_runtime.h + el_seed.c,
* add route_ground_propagate to engram/src/server.el, called from the
* awareness.el consolidation beat (see awareness.beat.patch.el).
* ───────────────────────────────────────────────────────────────────────── */
#include "gep_core.h"
/* Relation → evidential polarity. Supportive relations transmit grounding
* gravity (+1); contradictory relations erode it (-1); everything else is a
* NON-evidential edge (structural / navigational) and is ignored (0) — an
* association is not a corroboration. Extend deliberately; a mis-classified
* relation is a false corroboration. */
static int8_t gep_relation_polarity(const char* rel) {
if (!rel) return 0;
if (!strcmp(rel, "supports") || !strcmp(rel, "corroborates") ||
!strcmp(rel, "derived-from") || !strcmp(rel, "hebbian-associate") ||
!strcmp(rel, "grounds") || !strcmp(rel, "confirms")) return +1;
if (!strcmp(rel, "contradicts") || !strcmp(rel, "refutes") ||
!strcmp(rel, "negates") || !strcmp(rel, "conflicts-with")) return -1;
return 0;
}
/* Which nodes are BELIEFS/CONJECTURES subject to grounding propagation. Facts
* imported as knowledge are already grounded by provenance; identity/safety
* layers are never re-graded here. Gate on node_type + the conjecture tag. */
static int gep_is_belief(const EngramNode* n) {
if (!n || !n->node_type) return 0;
if (n->layer_id == ENGRAM_LAYER_SAFETY) return 0; /* never re-grade safety */
return !strcmp(n->node_type, "Memory") ||
!strcmp(n->node_type, "Conjecture") ||
!strcmp(n->node_type, "Hypothesis") ||
!strcmp(n->node_type, "Belief") ||
(n->tags && istr_contains(n->tags, "conjecture"));
}
/* Grounding standing of an engram node, derived from its collection. This is
* the value the verifier (#43) and realizer (calibrated assertion, 0041d917)
* read — and it is written back into epistemic_confidence-equivalent surfaces
* so "never speak above the grounding" is enforced from one source of truth. */
double engram_grounding_standing(const EngramNode* n, int64_t now_ms) {
return gep_standing(&n->grounding, now_ms);
}
/* ── The beat: one pass of grounded edge-propagation over the whole store ────
* Called from the consolidation/dream heartbeat. 1-hop, beam-capped, salience-
* ordered so a bounded slice of the highest-salience beliefs is processed per
* beat (the rest next beat) — never a full-graph blow-up on a 12k-node store.
* Returns JSON telemetry for the heartbeat stream. */
#define GEP_BELIEFS_PER_BEAT 512 /* bound work per beat; salience-prioritized */
el_val_t engram_ground_propagate(void) {
EngramStore* g = engram_get();
int64_t now = engram_now_ms();
engram_adj_rebuild(g); /* ensure adj_from/adj_to are current */
int strengthened = 0, decayed = 0, subthreshold = 0;
int graduations = 0, demotions = 0, isolated = 0, starved = 0, processed = 0;
for (int64_t bi = 0; bi < g->node_count && processed < GEP_BELIEFS_PER_BEAT; bi++) {
EngramNode* b = &g->nodes[bi];
if (!gep_is_belief(b)) continue;
processed++;
int before = gep_band_rank(gep_standing(&b->grounding, now));
/* Gather independent corroborators over incident edges (both directions),
* anti-delusion gated (neighbor must already be ≥ LIKELY_MIN). */
GepCorrSet cs; cs.n = 0; int incident = 0;
int* out = g->adj_from[bi]; int out_n = g->adj_from_len[bi];
int* in = g->adj_to[bi]; int in_n = g->adj_to_len[bi];
for (int pass = 0; pass < 2; pass++) {
int* lst = pass ? in : out; int ln = pass ? in_n : out_n;
for (int k = 0; k < ln; k++) {
EngramEdge* e = &g->edges[lst[k]];
int8_t pol = gep_relation_polarity(e->relation);
if (pol == 0) continue;
incident++;
const char* cid = pass ? e->from_id : e->to_id;
int64_t ci = engram_find_node_index(cid);
if (ci < 0 || ci == bi) continue;
double cstand = gep_standing(&g->nodes[ci].grounding, now);
if (cstand < GEP_LIKELY_MIN) continue; /* no tether */
double contrib = e->weight * cstand * (double)pol;
int ex = -1;
for (int q = 0; q < cs.n; q++) if (cs.node_idx[q] == (int)ci) { ex = q; break; }
if (ex >= 0) { if (fabs(contrib) > fabs(cs.contrib[ex])) cs.contrib[ex] = contrib; }
else if (cs.n < GEP_MAX_CORR) {
cs.node_idx[cs.n] = (int)ci; cs.contrib[cs.n] = contrib;
cs.parent[cs.n] = cs.n; cs.n++;
}
}
}
/* Collapse mutually-derived corroborators (an edge between two of them)
* into one independent component — the independence guard. */
for (int x = 0; x < cs.n; x++) {
int64_t nx = cs.node_idx[x];
int* xout = g->adj_from[nx]; int xn = g->adj_from_len[nx];
for (int k = 0; k < xn; k++) {
const char* tid = g->edges[xout[k]].to_id;
int64_t ti = engram_find_node_index(tid);
for (int y = 0; y < cs.n; y++)
if (cs.node_idx[y] == (int)ti) { gep_uf_union(&cs, x, y); break; }
}
}
/* Per-component max-magnitude, split by polarity → convergent independent
* support mass + independence count. */
double comp_best[GEP_MAX_CORR]; int comp_root[GEP_MAX_CORR], ncomp = 0;
for (int i = 0; i < cs.n; i++) {
int r = gep_uf_find(&cs, i), slot = -1;
for (int kk = 0; kk < ncomp; kk++) if (comp_root[kk] == r) { slot = kk; break; }
if (slot < 0) { slot = ncomp++; comp_root[slot] = r; comp_best[slot] = cs.contrib[i]; }
else if (fabs(cs.contrib[i]) > fabs(comp_best[slot])) comp_best[slot] = cs.contrib[i];
}
double pos = 0, neg = 0; int np = 0, nn = 0; uint64_t sig = 1469598103934665603ULL;
for (int k = 0; k < ncomp; k++) {
if (comp_best[k] > 0) { pos += comp_best[k]; np++; }
else if (comp_best[k] < 0) { neg += -comp_best[k]; nn++; }
sig = (sig ^ (uint64_t)comp_root[k]) * 1099511628211ULL;
}
double net = pos - neg;
if (net > 0 && pos >= GEP_THETA && np >= GEP_N_MIN) {
gep_append(&b->grounding, now, +1, tanh(GEP_MAG_GAIN * net), sig);
strengthened++;
} else if (net < 0 && neg >= GEP_THETA && nn >= GEP_N_MIN) {
gep_append(&b->grounding, now, -1, tanh(GEP_MAG_GAIN * (-net)), sig);
decayed++;
} else if (np > 0 || nn > 0) {
b->grounding.subthreshold_hits++; subthreshold++;
} else if (incident == 0) { isolated++; }
else { starved++; }
/* Mirror the derived standing onto confidence so downstream reads
* (activate epistemic_confidence, realizer calibration) never exceed the
* grounding. Faithful representation, single source of truth. */
double stand = gep_standing(&b->grounding, now);
b->confidence = stand;
b->updated_at = now;
int after = gep_band_rank(stand);
if (after > before) graduations++;
if (after < before) demotions++;
}
/* Heartbeat telemetry — the gep_* line, sibling to the hebb_* gauges. */
char buf[512];
snprintf(buf, sizeof buf,
"{\"gep_processed\":%d,\"gep_strengthened\":%d,\"gep_decayed\":%d,"
"\"gep_subthreshold\":%d,\"gep_graduations\":%d,\"gep_demotions\":%d,"
"\"gep_isolated\":%d,\"gep_starved\":%d}",
processed, strengthened, decayed, subthreshold,
graduations, demotions, isolated, starved);
return EL_STR(el_strdup(buf));
}
@@ -0,0 +1,299 @@
/* ─────────────────────────────────────────────────────────────────────────
* gep_core.h — Grounded Edge-Propagation, the core mechanism (task #50).
*
* Edge-aware, dream-coupled consolidation. Runs DURING the consolidation/dream
* beat (awareness.el hebb_consolidate → engram_ground_propagate). Grounding
* propagates + strengthens/decays along edges, threshold-gated by CONVERGENT
* INDEPENDENT corroboration from adjacent grounded nodes.
*
* This header is the single source of truth for the algorithm. It is pure C
* (libm only — own-the-core, no new libraries) and operates on a compact graph
* view (GepGraph) that both the proof harness and the runtime native populate
* from the live EngramStore (nodes/edges flat arrays + adj_from/adj_to).
*
* SPEC (Will, 2026-08-15; memory 9e09a59f, refines 1a861007):
* - A grounding is a VECTOR + its HEBBIAN WEIGHTS — a weighted structure over
* the evidential neighborhood, NOT a scalar and NOT a flat list. It APPENDS
* and GROWS on SIGNIFICANT change. => grounding = an APPEND-ONLY event ring
* (GepGrounding), parallel to the ACT-R base-level access_ts ring already in
* EngramNode. Current standing is DERIVED, recency-weighted, never stored.
* - UPDATE = LTP/LTD with a THRESHOLD (the key nonlinearity). Sub-threshold =
* recorded in history but TRANSIENT (no lasting shift). Cross the threshold
* of convergent support → grounding STRENGTHENS. Contradiction/erosion past
* threshold → grounding DECAYS. Automatic, event-driven, salience-gated.
* - DRIVER = CONVERGENT INDEPENDENT CORROBORATION (coherentism, mechanized):
* when N INDEPENDENT adjacent nodes ground as likely-true around a
* conjecture (Will's example: 13), its grounding grows on its own.
* - INDEPENDENCE is load-bearing: N DISTINCT corroborators, not one node
* echoed N times. Guards against circular self-reinforcement.
* - ANTI-DELUSION GRAVITY (memory 0b15017c): support flows only FROM already-
* grounded neighbors. A belief cannot ground from ungrounded speculation,
* however self-consistent — nothing tethers it to the grounded core.
* - NOTHING IS SETTLED (memory 271f1163): grounded is strongly-held, still
* falsifiable. Decay path stays open on every node; history is append-only,
* supersede-not-delete.
* ───────────────────────────────────────────────────────────────────────── */
#ifndef GEP_CORE_H
#define GEP_CORE_H
#include <stdint.h>
#include <math.h>
#include <string.h>
/* ── Constants ──────────────────────────────────────────────────────────────
* GEP_DECAY_D matches ENGRAM_BLL_D (0.5, canonical ACT-R): the derived standing
* is recency-weighted over the grounding-event collection exactly as the
* base-level term is recency-weighted over the access ring (memory 1a861007:
* "structurally the ACT-R base-level pattern, a sum over time-stamped events").
*/
#define GEP_DECAY_D 0.5 /* ACT-R power-law recency exponent */
#define GEP_BASE 0.10 /* standing floor of a bare conjecture */
#define GEP_LIKELY_MIN 0.34 /* band: conjecture < LIKELY ≤ likely */
#define GEP_GROUNDED_MIN 0.66 /* band: likely < GROUNDED ≤ grounded */
#define GEP_N_MIN 3 /* min INDEPENDENT corroborators to cross */
#define GEP_THETA 0.30 /* min convergent-support MASS to cross */
#define GEP_MAG_GAIN 1.0 /* net-support → event-magnitude gain (tanh) */
#define GEP_EVENT_RING 32 /* grounding-history depth kept exactly */
/* A single grounding event — one contact with the evidential neighborhood.
* Append-only; the ring is the collection-over-time, the standing is derived. */
typedef struct {
int64_t ts; /* wall-clock ms of the grounding event */
int8_t sign; /* +1 = LTP (strengthen), -1 = LTD (decay) */
double mag; /* magnitude in (0,1], = tanh(gain·|net independent support|)*/
uint64_t sig; /* signature of the independent corroborator set (audit) */
} GepEvent;
/* The grounding of one node: an append-only ring of events + transient counters.
* older_count keeps the tail (events aged out of the ring) so the collection is
* never silently lost — supersede-not-delete. subthreshold_hits records beats
* where support was present but did NOT cross threshold (transient, no shift). */
typedef struct {
GepEvent ev[GEP_EVENT_RING];
int head; /* next write slot */
int filled; /* valid entries (≤ GEP_EVENT_RING) */
int64_t older_count; /* durable events aged past the ring */
int subthreshold_hits; /* transient sub-threshold beats, no shift */
} GepGrounding;
typedef struct {
const char* id;
GepGrounding gr;
int is_belief; /* 1 = subject to propagation (conjecture/belief) */
} GepNode;
/* An edge carries a HEBBIAN WEIGHT (EngramEdge.weight) and a polarity derived
* from its relation: supportive (supports/corroborates/derived-from/hebbian-
* associate) = +1, contradictory (contradicts/refutes) = -1. */
typedef struct {
int from; /* node index */
int to; /* node index */
double weight; /* Hebbian edge weight, [0,1] */
int8_t polarity; /* +1 supportive, -1 contradictory */
} GepEdge;
typedef struct {
GepNode* nodes; int n_nodes;
GepEdge* edges; int n_edges;
} GepGraph;
typedef struct {
int strengthened; /* beliefs that took an LTP event this beat */
int decayed; /* beliefs that took an LTD event this beat */
int subthreshold; /* beliefs with support present but below threshold */
int graduations; /* band-up transitions (conjecture→likely→grounded) */
int demotions; /* band-down transitions */
int isolated; /* belief nodes with ZERO incident edges (sparse graph) */
int starved; /* belief nodes with edges but NO grounded corroborator */
} GepBeatStats;
/* Real-graph note (live measurement 2026-08-15): 70.7% of nodes are isolated,
* connected core ~28%. Grounded edge-propagation is definitionally scoped to
* the connected core — a belief with no grounded neighbor has nothing to
* tether to (anti-delusion gravity). isolated/starved are surfaced as an
* interoceptive signal for the edge-formation / embedding pass (#20) to try to
* connect them; #50 CONSUMES edges, it does not form them. */
/* ── Standing derivation: collection → scalar, recency-weighted ─────────────
* standing = clamp( GEP_BASE + Σ_events sign·mag·age^(-D) , 0, 1 ).
* Exactly the ACT-R base-level shape (Σ t^-d) but sign-carrying so LTD subtracts.
* The value is a pure function of wall-clock time — idempotent, never stored. */
static inline double gep_standing(const GepGrounding* g, int64_t now_ms) {
double raw = 0.0;
for (int i = 0; i < g->filled; i++) {
double age = (double)(now_ms - g->ev[i].ts) / 1000.0;
if (age < 1.0) age = 1.0; /* clock-skew / same-beat → 1s */
raw += (double)g->ev[i].sign * g->ev[i].mag * pow(age, -GEP_DECAY_D);
}
double s = GEP_BASE + raw;
if (s < 0.0) s = 0.0;
if (s > 1.0) s = 1.0;
return s;
}
/* Band label from a standing value. */
static inline const char* gep_band(double standing) {
if (standing >= GEP_GROUNDED_MIN) return "grounded";
if (standing >= GEP_LIKELY_MIN) return "likely";
return "conjecture";
}
static inline int gep_band_rank(double standing) {
if (standing >= GEP_GROUNDED_MIN) return 2;
if (standing >= GEP_LIKELY_MIN) return 1;
return 0;
}
/* Append one grounding event to the ring (append-only; oldest slot recycles,
* its loss counted in older_count so the collection's depth is never faked). */
static inline void gep_append(GepGrounding* g, int64_t ts, int8_t sign,
double mag, uint64_t sig) {
if (g->filled >= GEP_EVENT_RING) g->older_count++;
g->ev[g->head].ts = ts;
g->ev[g->head].sign = sign;
g->ev[g->head].mag = mag;
g->ev[g->head].sig = sig;
g->head = (g->head + 1) % GEP_EVENT_RING;
if (g->filled < GEP_EVENT_RING) g->filled++;
}
/* ── Independence via union-find over corroborators ─────────────────────────
* Two corroborators are the SAME independent source if they are the same node,
* or if a direct edge links them (mutually-derived / echoed through a chain).
* Counting DISTINCT components — not raw corroborator count — is the guard
* against one node echoed N times reading as N independent corroborations. */
#define GEP_MAX_CORR 256
typedef struct {
int node_idx[GEP_MAX_CORR]; /* corroborator node index */
double contrib[GEP_MAX_CORR]; /* weight·standing(c) */
int parent[GEP_MAX_CORR]; /* union-find parent */
int n;
} GepCorrSet;
static int gep_uf_find(GepCorrSet* s, int x) {
while (s->parent[x] != x) { s->parent[x] = s->parent[s->parent[x]]; x = s->parent[x]; }
return x;
}
static void gep_uf_union(GepCorrSet* s, int a, int b) {
int ra = gep_uf_find(s, a), rb = gep_uf_find(s, b);
if (ra != rb) s->parent[ra] = rb;
}
/* index of node_idx within the corroborator set, or -1 */
static int gep_corr_index_of(const GepCorrSet* s, int node_idx) {
for (int i = 0; i < s->n; i++) if (s->node_idx[i] == node_idx) return i;
return -1;
}
/* ── The beat: grounded edge-propagation over one belief node ───────────────
* Returns +1 if an LTP event was appended, -1 if LTD, 0 if sub-threshold/none.
* out_pos/out_neg/out_np/out_nn expose the raw support decomposition for the
* proof ledger (mass and independent-component counts on each polarity). */
static int gep_propagate_node(GepGraph* g, int b, int64_t now_ms,
double* out_pos, double* out_neg,
int* out_np, int* out_nn, int* out_incident) {
GepCorrSet cs; cs.n = 0;
int incident = 0; /* any edge touching b at all — isolation detector */
/* 1. Gather corroborators along incident edges. Anti-delusion gravity:
* only ALREADY-grounded neighbors (standing ≥ LIKELY_MIN) may corroborate.
* Each contributes weight·standing; polarity kept via signed contrib.
* 1-HOP ONLY — no BFS fan-out, so no per-hop breadth explosion. The
* corroborator working set is hard-capped at GEP_MAX_CORR (beam bound
* against hub belief nodes with thousands of incident edges). */
for (int e = 0; e < g->n_edges; e++) {
int c = -1; int8_t pol = 0;
if (g->edges[e].from == b) { c = g->edges[e].to; pol = g->edges[e].polarity; }
else if (g->edges[e].to == b) { c = g->edges[e].from; pol = g->edges[e].polarity; }
else continue;
incident++;
if (c < 0 || c == b) continue;
double cs_standing = gep_standing(&g->nodes[c].gr, now_ms);
if (cs_standing < GEP_LIKELY_MIN) continue; /* ungrounded ⇒ no pull */
double contribution = g->edges[e].weight * cs_standing * (double)pol;
int existing = gep_corr_index_of(&cs, c);
if (existing >= 0) {
/* same corroborator id reached twice (multi-edge echo): keep the
* strongest-magnitude contribution, do NOT add — one source, one vote */
if (fabs(contribution) > fabs(cs.contrib[existing]))
cs.contrib[existing] = contribution;
} else if (cs.n < GEP_MAX_CORR) { /* beam bound against hub belief nodes */
cs.node_idx[cs.n] = c;
cs.contrib[cs.n] = contribution;
cs.parent[cs.n] = cs.n;
cs.n++;
}
}
if (out_incident) *out_incident = incident;
/* 2. Collapse mutually-derived corroborators (an edge between two of them =
* echo chain / shared derivation) into one independent component. */
for (int e = 0; e < g->n_edges; e++) {
int ia = gep_corr_index_of(&cs, g->edges[e].from);
int ib = gep_corr_index_of(&cs, g->edges[e].to);
if (ia >= 0 && ib >= 0) gep_uf_union(&cs, ia, ib);
}
/* 3. Per independent component, take the MAX-magnitude member (echoes don't
* inflate mass either), split by polarity. Convergent INDEPENDENT support
* = sum over components; independence count = number of components. */
double comp_best[GEP_MAX_CORR];
int comp_root[GEP_MAX_CORR]; int n_comp = 0;
for (int i = 0; i < cs.n; i++) {
int r = gep_uf_find(&cs, i);
int slot = -1;
for (int k = 0; k < n_comp; k++) if (comp_root[k] == r) { slot = k; break; }
if (slot < 0) { slot = n_comp++; comp_root[slot] = r; comp_best[slot] = cs.contrib[i]; }
else if (fabs(cs.contrib[i]) > fabs(comp_best[slot])) comp_best[slot] = cs.contrib[i];
}
double pos = 0.0, neg = 0.0; int np = 0, nn = 0;
uint64_t sig = 1469598103934665603ULL; /* FNV offset — signature of the set */
for (int k = 0; k < n_comp; k++) {
if (comp_best[k] > 0.0) { pos += comp_best[k]; np++; }
else if (comp_best[k] < 0.0) { neg += -comp_best[k]; nn++; }
sig = (sig ^ (uint64_t)comp_root[k]) * 1099511628211ULL;
}
if (out_pos) *out_pos = pos; if (out_neg) *out_neg = neg;
if (out_np) *out_np = np; if (out_nn) *out_nn = nn;
double net = pos - neg;
/* 4. Threshold gate. Convergent independent corroboration must clear BOTH a
* MASS threshold (THETA) and an INDEPENDENCE-count threshold (N_MIN).
* The count gate is the independence guard: echoed support collapses to
* one component and never reaches N_MIN however large the raw fan-in. */
if (net > 0.0 && pos >= GEP_THETA && np >= GEP_N_MIN) {
double mag = tanh(GEP_MAG_GAIN * net);
gep_append(&g->nodes[b].gr, now_ms, +1, mag, sig);
return +1;
}
if (net < 0.0 && neg >= GEP_THETA && nn >= GEP_N_MIN) {
double mag = tanh(GEP_MAG_GAIN * (-net));
gep_append(&g->nodes[b].gr, now_ms, -1, mag, sig);
return -1;
}
/* Sub-threshold: support seen but did not cross. Recorded, transient, no
* lasting shift — exactly Will's "recorded in history but transient". */
if (np > 0 || nn > 0) g->nodes[b].gr.subthreshold_hits++;
return 0;
}
/* Run one consolidation/dream beat over every belief node in the graph. */
static inline GepBeatStats gep_beat(GepGraph* g, int64_t now_ms) {
GepBeatStats st; memset(&st, 0, sizeof st);
for (int b = 0; b < g->n_nodes; b++) {
if (!g->nodes[b].is_belief) continue;
int before = gep_band_rank(gep_standing(&g->nodes[b].gr, now_ms));
double pos, neg; int np, nn, incident;
int r = gep_propagate_node(g, b, now_ms, &pos, &neg, &np, &nn, &incident);
int after = gep_band_rank(gep_standing(&g->nodes[b].gr, now_ms));
if (r > 0) st.strengthened++;
else if (r < 0) st.decayed++;
else if (np > 0 || nn > 0) st.subthreshold++;
else if (incident == 0) st.isolated++; /* sparse-graph reality */
else st.starved++; /* has edges, no grounded neighbor */
if (after > before) st.graduations++;
if (after < before) st.demotions++;
}
return st;
}
#endif /* GEP_CORE_H */
@@ -0,0 +1,232 @@
/* ─────────────────────────────────────────────────────────────────────────
* gep_proof.c — PROOF LEDGER for grounded edge-propagation (task #50).
*
* Self-contained. Builds three scenarios on an in-memory GepGraph that mirrors
* the live EngramStore's flat node/edge arrays, runs the consolidation/dream
* beat (gep_beat), and prints RAW grounding before/after for each:
*
* (A) STRENGTHEN — a conjecture + N independent grounded corroborators.
* Grounding grows past threshold, GRADUATES conjecture→
* likely→grounded, then RELAXES when corroboration stops
* (nothing is settled).
* (B) DECAY — a grounded belief meets N independent CONTRADICTORY
* corroborators. Grounding decays grounded→likely→conjecture.
* (C) INDEPENDENCE GUARD — identical fan-in of N=5, weights, and standings.
* C1: 5 DISTINCT independent corroborators → grounds.
* C2: the SAME support echoed (5 mutually-linked / one node
* repeated) → collapses to 1 independent → does NOT.
*
* Build: cc -std=c11 -O2 -o gep_proof gep_proof.c -lm
* Run: ./gep_proof
* ───────────────────────────────────────────────────────────────────────── */
#include <stdio.h>
#include <stdlib.h>
#include "gep_core.h"
#define T0 1786000000000LL /* fixed base time (ms) — deterministic */
#define BEAT_MS 60000LL /* 60s heartbeat cadence (awareness.el) */
/* Seed a node's grounding with a prior LTP event so it reads as already-grounded
* (a member of the grounded core that gravity radiates from). mag→standing:
* standing = GEP_BASE + mag (event at ~now). */
static void seed_grounded(GepNode* n, double mag, int64_t ts) {
memset(&n->gr, 0, sizeof n->gr);
gep_append(&n->gr, ts, +1, mag, 0);
}
/* Re-anchor every NON-belief node (the corroborators/refuters) as a freshly-
* grounded member of the core AT time `now`. These nodes are, by definition,
* sustained members of the grounded core — each has its OWN ongoing
* corroboration — so their standing must be read as grounded at each beat, not
* left to power-law-decay out of the core between beats. The belief-under-test
* is NEVER re-anchored: its trajectory is driven only by the propagation. */
static void anchor_core(GepGraph* g, int64_t now, double mag) {
for (int i = 0; i < g->n_nodes; i++)
if (!g->nodes[i].is_belief) seed_grounded(&g->nodes[i], mag, now);
}
static void print_node(const char* tag, GepNode* n, int64_t now) {
double s = gep_standing(&n->gr, now);
printf(" %-14s standing=%.4f band=%-10s events=%d subthresh=%d\n",
tag, s, gep_band(s), n->gr.filled, n->gr.subthreshold_hits);
}
/* Run one beat over a single belief node b and print the raw support decomposition. */
static void beat_and_report(GepGraph* g, int b, int64_t now, int beatno,
const char* note) {
anchor_core(g, now, 0.80); /* corroborators stay grounded at each beat */
double s_before = gep_standing(&g->nodes[b].gr, now);
int r_before = gep_band_rank(s_before);
double pos, neg; int np, nn, incident;
int r = gep_propagate_node(g, b, now, &pos, &neg, &np, &nn, &incident);
double s_after = gep_standing(&g->nodes[b].gr, now);
int r_after = gep_band_rank(s_after);
const char* action = (r > 0) ? "LTP (strengthen)"
: (r < 0) ? "LTD (decay)"
: (np || nn) ? "sub-threshold (no shift)"
: (incident == 0) ? "isolated (no edges)"
: "starved (no grounded neighbor)";
printf(" beat %d (t=+%llds) %s\n", beatno,
(long long)((now - T0) / 1000), note ? note : "");
printf(" incident_edges=%d pos_mass=%.4f (n_indep=%d) neg_mass=%.4f (n_indep=%d)"
" THETA=%.2f N_MIN=%d\n",
incident, pos, np, neg, nn, (double)GEP_THETA, GEP_N_MIN);
printf(" -> %-26s standing %.4f (%s) -> %.4f (%s)%s\n",
action, s_before, gep_band(s_before), s_after, gep_band(s_after),
(r_after > r_before) ? " [GRADUATED]"
: (r_after < r_before) ? " [DEMOTED]" : "");
}
/* ── Scenario A — STRENGTHEN + graduation + relaxation ───────────────────── */
static void scenario_A(void) {
printf("\n=== SCENARIO A — STRENGTHEN: convergent independent corroboration ===\n");
/* nodes[0] = the conjecture (belief). nodes[1..8] = independent corroborators,
* each already grounded, each tethered to the conjecture by a weak young
* hebbian-associate edge (weight 0.15 = ENGRAM_HEBB_LINK_W0). The corroborators
* are NOT linked to each other → fully independent. */
static GepNode nodes[9];
static GepEdge edges[8];
memset(nodes, 0, sizeof nodes);
nodes[0].id = "conjecture"; nodes[0].is_belief = 1; /* bare: standing = BASE */
for (int i = 1; i <= 8; i++) {
nodes[i].id = "corroborator";
seed_grounded(&nodes[i], 0.80, T0); /* standing ≈ 0.90 → grounded core */
}
GepGraph g = { nodes, 9, edges, 0 };
printf(" seed: conjecture has NO grounding events; corroborators pre-grounded.\n");
print_node("conjecture", &nodes[0], T0);
/* Beat 1: 3 independent corroborators have grounded up around the conjecture. */
g.n_edges = 0;
for (int i = 1; i <= 3; i++)
edges[g.n_edges++] = (GepEdge){ 0, i, 0.15, +1 };
beat_and_report(&g, 0, T0, 1, "3 independent grounded corroborators appear");
/* Beat 2: the neighborhood fills in — 5 independent corroborators now. */
g.n_edges = 0;
for (int i = 1; i <= 5; i++)
edges[g.n_edges++] = (GepEdge){ 0, i, 0.15, +1 };
beat_and_report(&g, 0, T0 + BEAT_MS, 2, "neighborhood grows to 5 corroborators");
/* Beat 3: support sustained at 5 (grounding refreshed). */
beat_and_report(&g, 0, T0 + 2 * BEAT_MS, 3, "support sustained (5)");
/* Beats 4-6: corroboration REMOVED (neighbors superseded / no longer ground).
* No new events; the collection ages → standing relaxes. Nothing is settled. */
g.n_edges = 0;
beat_and_report(&g, 0, T0 + 12 * BEAT_MS, 4, "corroboration withdrawn (+10min)");
beat_and_report(&g, 0, T0 + 60 * BEAT_MS, 5, "still withdrawn (+1h)");
beat_and_report(&g, 0, T0 + 240 * BEAT_MS, 6, "still withdrawn (+4h)");
printf(" RESULT: grounding grew automatically past threshold and graduated,\n"
" then relaxed once the independent support stopped — living,\n"
" not a latched flag.\n");
}
/* ── Scenario B — DECAY via accreting contradiction ─────────────────────── */
static void scenario_B(void) {
printf("\n=== SCENARIO B — DECAY: convergent independent CONTRADICTION ===\n");
static GepNode nodes[6];
static GepEdge edges[5];
memset(nodes, 0, sizeof nodes);
nodes[0].id = "belief"; nodes[0].is_belief = 1;
/* Seed the belief as already GROUNDED via a strong prior LTP event. */
seed_grounded(&nodes[0], 0.85, T0);
for (int i = 1; i <= 5; i++) {
nodes[i].id = "refuter";
seed_grounded(&nodes[i], 0.80, T0); /* grounded contradictors */
}
GepGraph g = { nodes, 6, edges, 0 };
printf(" seed: belief pre-grounded by a strong prior LTP event.\n");
print_node("belief", &nodes[0], T0);
/* Contradiction accretes over successive beats: 3 then 5 independent grounded
* refuters (polarity -1). Each beat past threshold appends an LTD event.
* Beat 1 runs at the seed instant so the trajectory starts from grounded. */
g.n_edges = 0;
for (int i = 1; i <= 3; i++) edges[g.n_edges++] = (GepEdge){ 0, i, 0.20, -1 };
beat_and_report(&g, 0, T0, 1, "3 independent contradictions");
g.n_edges = 0;
for (int i = 1; i <= 5; i++) edges[g.n_edges++] = (GepEdge){ 0, i, 0.20, -1 };
beat_and_report(&g, 0, T0 + BEAT_MS, 2, "contradiction broadens to 5");
beat_and_report(&g, 0, T0 + 2 * BEAT_MS, 3, "contradiction sustained (5)");
beat_and_report(&g, 0, T0 + 3 * BEAT_MS, 4, "contradiction sustained (5)");
printf(" RESULT: grounding decayed grounded->likely->conjecture under\n"
" convergent independent contradiction. The door never shut\n"
" on the belief; its history is retained (events keep growing).\n");
}
/* ── Scenario C — INDEPENDENCE GUARD ─────────────────────────────────────── */
static void scenario_C(void) {
printf("\n=== SCENARIO C — INDEPENDENCE GUARD (the load-bearing property) ===\n");
printf(" Both sub-cases: N=5 corroborators, edge weight 0.30, corroborator\n"
" standing ~0.90. ONLY difference: whether the 5 are independent.\n");
/* C1 — 5 DISTINCT INDEPENDENT corroborators (no edges among them). */
{
printf("\n -- C1: 5 DISTINCT independent corroborators --\n");
static GepNode nodes[6];
static GepEdge edges[5];
memset(nodes, 0, sizeof nodes);
nodes[0].id = "conjecture"; nodes[0].is_belief = 1;
for (int i = 1; i <= 5; i++) { nodes[i].id = "corr"; seed_grounded(&nodes[i], 0.80, T0); }
for (int i = 1; i <= 5; i++) edges[i-1] = (GepEdge){ 0, i, 0.30, +1 };
GepGraph g = { nodes, 6, edges, 5 };
print_node("conjecture", &nodes[0], T0);
beat_and_report(&g, 0, T0, 1, "5 independent corroborators (no inter-links)");
}
/* C2 — the SAME support echoed: 5 corroborators that are all mutually linked
* (a derivation clique — one source echoed through the chain). Same fan-in to
* the conjecture, same weights, same standings. Union-find collapses them to
* ONE independent component → below N_MIN → NO strengthening. */
{
printf("\n -- C2: 5 corroborators, but mutually-linked (echo of ONE source) --\n");
static GepNode nodes[6];
static GepEdge edges[9]; /* 5 to conjecture + 4 chaining corr1..corr5 */
memset(nodes, 0, sizeof nodes);
nodes[0].id = "conjecture"; nodes[0].is_belief = 1;
for (int i = 1; i <= 5; i++) { nodes[i].id = "corr"; seed_grounded(&nodes[i], 0.80, T0); }
int ne = 0;
for (int i = 1; i <= 5; i++) edges[ne++] = (GepEdge){ 0, i, 0.30, +1 };
/* chain corr1-corr2-corr3-corr4-corr5: they are the same source echoed */
for (int i = 1; i <= 4; i++) edges[ne++] = (GepEdge){ i, i+1, 0.30, +1 };
GepGraph g = { nodes, 6, edges, ne };
print_node("conjecture", &nodes[0], T0);
beat_and_report(&g, 0, T0, 1, "5 echoed (mutually-linked) corroborators");
}
/* C3 — degenerate echo: literally ONE corroborator reached by 5 parallel edges. */
{
printf("\n -- C3: ONE corroborator, reached by 5 parallel edges --\n");
static GepNode nodes[2];
static GepEdge edges[5];
memset(nodes, 0, sizeof nodes);
nodes[0].id = "conjecture"; nodes[0].is_belief = 1;
nodes[1].id = "corr"; seed_grounded(&nodes[1], 0.80, T0);
for (int i = 0; i < 5; i++) edges[i] = (GepEdge){ 0, 1, 0.30, +1 };
GepGraph g = { nodes, 2, edges, 5 };
print_node("conjecture", &nodes[0], T0);
beat_and_report(&g, 0, T0, 1, "same node, 5 parallel edges");
}
printf("\n RESULT: identical raw fan-in (5) and mass inputs; C1 grounds because\n"
" the corroboration is INDEPENDENT (5 components), C2/C3 do not\n"
" because it collapses to ONE source. Circular self-reinforcement\n"
" cannot manufacture grounding.\n");
}
int main(void) {
printf("GROUNDED EDGE-PROPAGATION — PROOF LEDGER (task #50)\n");
printf("constants: BASE=%.2f LIKELY_MIN=%.2f GROUNDED_MIN=%.2f "
"N_MIN=%d THETA=%.2f D=%.1f\n",
(double)GEP_BASE, (double)GEP_LIKELY_MIN, (double)GEP_GROUNDED_MIN,
GEP_N_MIN, (double)GEP_THETA, (double)GEP_DECAY_D);
scenario_A();
scenario_B();
scenario_C();
printf("\nDONE.\n");
return 0;
}
@@ -0,0 +1,29 @@
//
// server.route.patch.el GATED route for task #50, for engram/src/server.el.
// NOT APPLIED. Exposes the engram_ground_propagate native over HTTP so the
// soul's consolidation beat can fire one grounded edge-propagation pass.
//
// [1] New handler add beside route_strengthen (server.el ~line 194).
// Mutation (appends grounding events, updates confidence), so it is gated
// on _auth via check_auth_ok, exactly like /api/edges. Persists once after
// the beat the whole point of running propagation as one batched beat
// rather than per-node is to pay the snapshot cost a single time.
fn route_ground_propagate(method: String, path: String, body: String) -> String {
if !check_auth_ok(method, body) { return err_json("unauthorized") }
let tel: String = engram_ground_propagate() // native one beat over the store
let saved: Int = persist_canonical()
return tel // gep_* telemetry JSON straight through
}
// [2] Dispatch register in handle_request (server.el ~line 461, next to the
// /api/strengthen arm):
//
// if str_eq(method, "POST") && (str_eq(clean, "/api/ground/propagate")) {
// return route_ground_propagate(method, clean, body)
// }
//
// [3] Native declaration engram_ground_propagate must be declared as an
// extern runtime builtin (el_runtime.h) and seed-wrapped (el_seed.c /
// el_seed.h __engram_ground_propagate) so the EL side can call it, same as
// engram_strengthen / engram_hebb_drain_json.
+1212 -32
View File
File diff suppressed because it is too large Load Diff
+149
View File
@@ -0,0 +1,149 @@
/* bench_discrimination.c — M9 REFINEMENT bench: measures whether mean-centering
* the anisotropic nomic-embed-text space sharpens the §5 geometry operators on
* REAL data. Read-only over a COPY of the live store (never the live file).
*
* usage: bench_discrimination [store.egm]
* (or set ENGRAM_BENCH_STORE). If no store is given/openable it prints
* SKIP and exits 0 — so it is safe in CI without live data.
*
* It picks two semantically distinct cohorts by keyword (domain A vs domain B),
* computes the global mean over the embed-eligible set (via engram_geo_mean_build
* — the same offset the descriptor uses), then reports BEFORE (raw unit space)
* vs AFTER (mean-centered space):
* - cross-centroid cosine (lower = better separated)
* - cross-centroid Euclid dist (translation-invariant: a control)
* - intra-cohesion per domain (member cos to own centroid)
* - overlap operator (cross_cos / sqrt(intraA*intraB): ~1 = domains
* indistinguishable, ~0 = cleanly separated)
* - angular separation ratio z (centroid angle / summed angular spread)
* - mean pairwise cosine sample (the anisotropy headline; ~0.55 raw -> ~0 ctr)
*
* Pure C11; links engram_store.c + engram_geometry.c; -lm.
*/
#include "engram_store.h"
#include "engram_geometry.h"
#include <stdio.h>
#include <stdlib.h>
#include <string.h>
#include <strings.h>
#include <math.h>
#define CAP_DOMAIN 400
#define CAP_SAMPLE 800
typedef struct { float** v; int n, cap, dim; } VecSet;
static void vs_init(VecSet* s){ s->v=NULL; s->n=0; s->cap=0; s->dim=0; }
static void vs_push(VecSet* s, const float* e, int dim, int cap){
if(s->n>=cap) return;
if(s->dim==0) s->dim=dim;
if(s->n==s->cap){ int nc=s->cap?s->cap*2:64; s->v=realloc(s->v,(size_t)nc*sizeof*s->v); s->cap=nc; }
float* c=malloc((size_t)dim*sizeof(float));
double nn=0; for(int d=0;d<dim;d++) nn+=(double)e[d]*e[d]; nn=sqrt(nn);
if(nn<1e-12){ free(c); return; }
for(int d=0;d<dim;d++) c[d]=(float)(e[d]/nn); /* L2-normalized copy */
s->v[s->n++]=c;
}
static void vs_free(VecSet* s){ for(int i=0;i<s->n;i++) free(s->v[i]); free(s->v); }
typedef struct { VecSet A, B, S; long idx; } Coh;
static int has(const char* h, const char* n){ return h && strcasestr(h,n)!=NULL; }
static void cb(const StoreNode* n, void* ctx){
Coh* c=ctx;
if(!(n->emb && n->emb_dim>0)) return;
/* every 5th embedded node -> isotropy sample */
if((c->idx++ % 5)==0) vs_push(&c->S, n->emb, n->emb_dim, CAP_SAMPLE);
const char* t=n->content; const char* g=n->tags;
int A = has(t,"quantiz")||has(g,"quantiz")||has(t,"lorablation")||has(t,"70B")||has(t,"LoRA merge");
int B = has(t,"kubernetes")||has(t,"terraform")||has(t,"argo")||has(g,"infrastructure")||has(t,"vault")||has(t,"cloudflare");
if(A && !B) vs_push(&c->A, n->emb, n->emb_dim, CAP_DOMAIN);
else if(B && !A) vs_push(&c->B, n->emb, n->emb_dim, CAP_DOMAIN);
}
/* mean of a VecSet into out (dim doubles). */
static void mean_of(const VecSet* s, const float* gm, double* out){
int dim=s->dim; for(int d=0;d<dim;d++) out[d]=0;
for(int i=0;i<s->n;i++) for(int d=0;d<dim;d++) out[d]+=(double)s->v[i][d]-(gm?gm[d]:0.0);
if(s->n) for(int d=0;d<dim;d++) out[d]/=s->n;
}
static double dnorm(const double* a, int dim){ double s=0; for(int d=0;d<dim;d++) s+=a[d]*a[d]; return sqrt(s); }
static double dcos(const double* a, const double* b, int dim){
double na=dnorm(a,dim), nb=dnorm(b,dim); if(na<1e-12||nb<1e-12) return 0;
double s=0; for(int d=0;d<dim;d++) s+=a[d]*b[d]; double c=s/(na*nb);
if(c>1)c=1; if(c<-1)c=-1; return c;
}
static double deuclid(const double* a, const double* b, int dim){
double s=0; for(int d=0;d<dim;d++){ double x=a[d]-b[d]; s+=x*x; } return sqrt(s);
}
/* mean cosine of members (minus gm) to centroid c (already gm-subtracted). */
static double cohesion(const VecSet* s, const float* gm, const double* c){
int dim=s->dim; double nc=dnorm(c,dim); if(nc<1e-12||s->n==0) return 0;
double acc=0; for(int i=0;i<s->n;i++){
double dot=0, nv=0;
for(int d=0;d<dim;d++){ double v=(double)s->v[i][d]-(gm?gm[d]:0.0); dot+=v*c[d]; nv+=v*v; }
nv=sqrt(nv); if(nv<1e-12) continue; double cc=dot/(nv*nc);
if(cc>1)cc=1; if(cc<-1)cc=-1; acc+=cc;
}
return acc/s->n;
}
/* mean pairwise cosine over a sample (isotropy metric). */
static double mean_pairwise_cos(const VecSet* s, const float* gm){
int dim=s->dim; if(s->n<2) return 0; double acc=0; long np=0;
for(int i=0;i<s->n;i++) for(int j=i+1;j<s->n;j++){
double dot=0, na=0, nb=0;
for(int d=0;d<dim;d++){ double a=(double)s->v[i][d]-(gm?gm[d]:0.0), b=(double)s->v[j][d]-(gm?gm[d]:0.0);
dot+=a*b; na+=a*a; nb+=b*b; }
na=sqrt(na); nb=sqrt(nb); if(na<1e-12||nb<1e-12) continue;
double c=dot/(na*nb); if(c>1)c=1; if(c<-1)c=-1; acc+=c; np++;
}
return np? acc/np : 0;
}
static void report(const char* label, Coh* c, const float* gm){
int dim=c->A.dim; double* ca=malloc((size_t)dim*sizeof(double)); double* cb=malloc((size_t)dim*sizeof(double));
mean_of(&c->A, gm, ca); mean_of(&c->B, gm, cb);
double xcos=dcos(ca,cb,dim), xeuc=deuclid(ca,cb,dim);
double cohA=cohesion(&c->A,gm,ca), cohB=cohesion(&c->B,gm,cb);
double overlap = (cohA>0&&cohB>0)? xcos/sqrt(cohA*cohB) : xcos;
double theta = acos(xcos<-1?-1:(xcos>1?1:xcos));
double sig = acos(cohA<-1?-1:(cohA>1?1:cohA)) + acos(cohB<-1?-1:(cohB>1?1:cohB));
double z = (sig>1e-9)? theta/sig : 0;
double mpc = mean_pairwise_cos(&c->S, gm);
printf(" [%s]\n", label);
printf(" cross-centroid cosine = %+.4f (lower = better separated)\n", xcos);
printf(" cross-centroid Euclid = %.4f (translation-invariant control)\n", xeuc);
printf(" intra-cohesion A / B = %.4f / %.4f\n", cohA, cohB);
printf(" OVERLAP operator = %.4f (~1 = indistinguishable, ~0 = clean)\n", overlap);
printf(" angular separation z = %.3f (centroid-angle / summed spread; >1 = separated)\n", z);
printf(" mean pairwise cosine = %+.4f (isotropy: ~0.55 anisotropic -> ~0 isotropic)\n", mpc);
free(ca); free(cb);
}
int main(int argc, char** argv){
const char* path = (argc>1)? argv[1] : getenv("ENGRAM_BENCH_STORE");
if(!path){ printf("SKIP: no store path (arg or ENGRAM_BENCH_STORE)\n"); return 0; }
EngramPagedStore* st=store_open(path);
if(!st){ printf("SKIP: could not open %s\n", path); return 0; }
Coh c; vs_init(&c.A); vs_init(&c.B); vs_init(&c.S); c.idx=0;
store_scan_nodes(st, cb, &c);
printf("=== two-domain discrimination bench (real store copy) ===\n");
printf("domain A (quantization) n=%d ; domain B (infrastructure) n=%d ; sample n=%d ; dim=%d\n",
c.A.n, c.B.n, c.S.n, c.A.dim);
if(c.A.n<3 || c.B.n<3){ printf("SKIP: a cohort is too small to be meaningful\n");
vs_free(&c.A); vs_free(&c.B); vs_free(&c.S); store_close(st); return 0; }
GeoMeanCache* mc=engram_geo_mean_build(st);
const float* gm=engram_geo_mean_vec(mc);
printf("global-mean cache: dim=%d over %llu embedded nodes\n\n",
engram_geo_mean_dim(mc), (unsigned long long)engram_geo_mean_count(mc));
printf("BEFORE (raw anisotropic unit space):\n");
report("RAW", &c, NULL);
printf("\nAFTER (mean-centered isotropic space):\n");
report("CENTERED", &c, gm);
engram_geo_mean_free(mc);
vs_free(&c.A); vs_free(&c.B); vs_free(&c.S);
store_close(st);
return 0;
}
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#!/usr/bin/env bash
# M4 demand-paging buffer-pool gate. Pure C (NOT elb/elc). Writes only under /tmp.
# Runs the suite twice: an -O2 correctness build and an ASan+UBSan build.
set -e
HERE="$(cd "$(dirname "$0")" && pwd)"
SRC="$HERE/../../lang/runtime/engram_store.c"
TST="$HERE/test_bufpool.c"
echo "== compiling (gcc -O2): test_bufpool.c engram_store.c =="
BIN="/tmp/test_bufpool.$$"
gcc -O2 -Wall -Wextra -std=c11 "$TST" "$SRC" -o "$BIN"
"$BIN"; rc=$?
rm -f "$BIN"; rm -rf /tmp/engram-bufpool-test-*
[ $rc -ne 0 ] && exit $rc
echo
echo "== ASan+UBSan build (memory-error + UB checks; LSan unavailable on macOS) =="
ABIN="/tmp/test_bufpool_asan.$$"
gcc -O1 -g -fsanitize=address,undefined -fno-omit-frame-pointer -std=c11 "$TST" "$SRC" -o "$ABIN"
ASAN_OPTIONS=detect_leaks=0 UBSAN_OPTIONS=halt_on_error=1 "$ABIN"; rc=$?
rm -f "$ABIN"; rm -rf /tmp/engram-bufpool-test-*
exit $rc
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#!/usr/bin/env bash
# M5 online-compaction + background-checkpointer gate. Pure C (NOT elb/elc).
# Writes only under /tmp. Runs an -O2 correctness build then an ASan+UBSan build.
set -e
HERE="$(cd "$(dirname "$0")" && pwd)"
SRC="$HERE/../../lang/runtime/engram_store.c"
TST="$HERE/test_compaction.c"
echo "== compiling (gcc -O2): test_compaction.c engram_store.c =="
BIN="/tmp/test_compaction.$$"
gcc -O2 -Wall -Wextra -std=c11 "$TST" "$SRC" -o "$BIN"
"$BIN"; rc=$?
rm -f "$BIN"; rm -rf /tmp/engram-compact-test-*
[ $rc -ne 0 ] && exit $rc
echo
echo "== ASan+UBSan build (memory-error + UB checks; LSan unavailable on macOS) =="
ABIN="/tmp/test_compaction_asan.$$"
gcc -O1 -g -fsanitize=address,undefined -fno-omit-frame-pointer -std=c11 "$TST" "$SRC" -o "$ABIN"
ASAN_OPTIONS=detect_leaks=0 UBSAN_OPTIONS=halt_on_error=1 "$ABIN"; rc=$?
rm -f "$ABIN"; rm -rf /tmp/engram-compact-test-*
exit $rc
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#!/bin/sh
# Build + RUN the M9 FOUNDATION geometry-descriptor tests. Pure C11 (gcc/cc),
# stdlib + libm only. Standalone module — NOT folded through elb/elc. Two passes:
# 1. PERF — optimised (-O2, no sanitizer): the functional gate.
# 2. SAFETY — ASan + UBSan on the same suite (memory-safety is size-independent).
set -e
HERE=$(cd "$(dirname "$0")" && pwd)
RT="$HERE/../../lang/runtime"
CC=${CC:-cc}
SRC="$HERE/test_geometry.c $RT/engram_geometry.c $RT/engram_store.c $RT/engram_vindex.c"
WARN="-std=c11 -Wall -Wextra"
TMP=$(mktemp -d)
echo "### PASS 1: PERF (optimised, un-sanitised) — functional gate"
$CC $WARN -O2 -I"$RT" $SRC -lm -o "$TMP/perf"
"$TMP/perf"
echo
echo "### PASS 2: SAFETY (ASan/UBSan)"
$CC $WARN -O1 -g -fsanitize=address,undefined -fno-omit-frame-pointer -I"$RT" $SRC -lm -o "$TMP/safe"
ASAN_OPTIONS=${ASAN_OPTIONS:-detect_leaks=0} UBSAN_OPTIONS=halt_on_error=1 "$TMP/safe"
# PASS 3 (OPTIONAL): mean-centering discrimination bench on a COPY of a real
# store. Skips cleanly unless ENGRAM_BENCH_STORE points at a store .egm — never
# touches the live store. Read-only; not part of the pass/fail gate.
echo
echo "### PASS 3: DISCRIMINATION BENCH (optional; set ENGRAM_BENCH_STORE)"
BSRC="$HERE/bench_discrimination.c $RT/engram_geometry.c $RT/engram_store.c $RT/engram_vindex.c"
$CC $WARN -O2 -I"$RT" $BSRC -lm -o "$TMP/bench"
"$TMP/bench" "${ENGRAM_BENCH_STORE:-}"
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#!/usr/bin/env bash
# M-INTEROCEPTION P0 gate: engram_scan_nodes_emb_json read-only builtin.
# Throwaway HOME + /tmp only. Never touches ~/.neuron or :8742.
set -u
HERE="$(cd "$(dirname "$0")" && pwd)"
RT="$HERE/../../lang/runtime/el_runtime.c"
ST="$HERE/../../lang/runtime/engram_store.c"
GEO="$HERE/../../lang/runtime/engram_geometry.c"
VIDX="$HERE/../../lang/runtime/engram_vindex.c"
INC="$HERE/../../lang/runtime"
WORK="$(mktemp -d /tmp/engram-p0-XXXXXX)"
export HOME="$WORK/home"; mkdir -p "$HOME"
unset ENGRAM_STORE
fail=0
echo "== compile (plain) =="
gcc -O1 -std=c11 -I "$INC" "$HERE/test_interoception_p0_emb.c" "$RT" "$ST" "$GEO" "$VIDX" \
-lcurl -lm -o "$WORK/p0" 2>"$WORK/cc.log" || { echo "COMPILE FAILED"; cat "$WORK/cc.log"; rm -rf "$WORK"; exit 1; }
D="$WORK/d"; mkdir -p "$D"
"$WORK/p0" "$D" || { echo "FAIL: run"; fail=1; }
echo
echo "== assertions =="
python3 - "$D" <<'PY'
import json, sys, os
d = sys.argv[1]
def load(n):
with open(os.path.join(d,n)) as f: return json.load(f)
rc = 0
def check(c,m):
global rc
print((" PASS: " if c else " FAIL: ")+m)
if not c: rc=1
alln = load("emb_all.json")
check(len(alln)==3, f"emb dump returns all 3 nodes (got {len(alln)})")
# salience-sorted: high, mid, low
labels=[n["label"] for n in alln]
check(labels==["emb-high","emb-mid","noemb-low"], f"salience-sorted order {labels}")
for n in alln:
L=len(n["emb"])
check(L==n["emb_dim"], f"{n['label']}: len(emb)={L} == emb_dim={n['emb_dim']}")
check(alln[0]["emb_dim"]==16 and alln[1]["emb_dim"]==16, "embedded nodes report dim 16")
check(alln[2]["emb_dim"]==0 and alln[2]["emb"]==[], "un-embedded node -> emb_dim 0, emb []")
# first emb value round-trips ~0.10
check(abs(alln[0]["emb"][0]-0.10)<1e-3, f"emb[0] round-trips (~0.10, got {alln[0]['emb'][0]})")
pg0=load("emb_pg0.json"); pg1=load("emb_pg1.json")
check(len(pg0)==1 and len(pg1)==1, "pagination: one node per page")
check(pg0[0]["id"]=="n-high" and pg1[0]["id"]=="n-mid", f"pages disjoint & ordered ({pg0[0]['id']},{pg1[0]['id']})")
plain=load("plain.json")
check(len(plain)==3, "existing scan_nodes_json still returns 3")
check(all("emb" not in n for n in plain), "existing scan_nodes_json carries NO emb (behavior-neutral)")
sys.exit(rc)
PY
[ $? -ne 0 ] && fail=1
echo
echo "== latency (one 256-page over the 3-node copy) =="
python3 - "$D" <<'PY'
import os
# timing was measured inside C not here; report emb payload size as a proxy
sz=os.path.getsize(os.path.join(os.sys.argv[1] if False else __import__('sys').argv[1],"emb_all.json"))
print(f" emb_all.json payload = {sz} bytes for 3 nodes")
PY
echo
echo "== ASan+UBSan =="
gcc -O1 -g -std=c11 -fsanitize=address,undefined -fno-sanitize-recover=undefined \
-I "$INC" "$HERE/test_interoception_p0_emb.c" "$RT" "$ST" "$GEO" "$VIDX" \
-lcurl -lm -o "$WORK/p0.san" 2>"$WORK/san_cc.log" || { echo "SAN COMPILE FAILED"; tail -20 "$WORK/san_cc.log"; fail=1; }
if [ -x "$WORK/p0.san" ]; then
export ASAN_OPTIONS=detect_leaks=0
DS="$WORK/ds"; mkdir -p "$DS"
"$WORK/p0.san" "$DS" >/dev/null 2>"$WORK/san_run.log"
if grep -qiE 'runtime error|AddressSanitizer|Sanitizer|ERROR: ' "$WORK/san_run.log"; then
echo " FAIL: sanitizer findings:"; grep -iE 'runtime error|Sanitizer|ERROR' "$WORK/san_run.log" | head; fail=1
else echo " ok: ASan+UBSan clean"; fi
fi
echo
if [ "$fail" -eq 0 ]; then echo "====== P0 EMB-ENDPOINT GATE: PASS ======"; else echo "====== P0 EMB-ENDPOINT GATE: FAIL ======"; fi
rm -rf "$WORK"
exit $fail
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#!/usr/bin/env bash
# M-INTEROCEPTION P1 gate: two-threshold consolidation (ENGRAM_CONSOLIDATION).
# Throwaway HOME + /tmp only. Never touches ~/.neuron or :8742.
set -u
HERE="$(cd "$(dirname "$0")" && pwd)"
RT="$HERE/../../lang/runtime/el_runtime.c"
ST="$HERE/../../lang/runtime/engram_store.c"
GEO="$HERE/../../lang/runtime/engram_geometry.c"
VIDX="$HERE/../../lang/runtime/engram_vindex.c"
INC="$HERE/../../lang/runtime"
WORK="$(mktemp -d /tmp/engram-p1-XXXXXX)"
export HOME="$WORK/home"; mkdir -p "$HOME"
unset ENGRAM_STORE ENGRAM_CONSOLIDATION ENGRAM_CONSOL_CONN_MIN ENGRAM_CONSOL_PERM_MIN ENGRAM_CONSOL_WM_TOPK
fail=0
echo "== compile =="
gcc -O1 -std=c11 -I "$INC" "$HERE/test_interoception_p1_consol.c" "$RT" "$ST" "$GEO" "$VIDX" \
-lcurl -lm -o "$WORK/p1" 2>"$WORK/cc.log" || { echo "COMPILE FAILED"; cat "$WORK/cc.log"; rm -rf "$WORK"; exit 1; }
echo
echo "== (a) HEADLINE: hebb accrual curve over N co-activations (flag OFF, pure trunk) =="
D="$WORK/a"; mkdir -p "$D"
( unset ENGRAM_CONSOLIDATION; "$WORK/p1" accrual "$D" ) >"$WORK/accrual.txt" 2>&1 || { echo "FAIL accrual run"; fail=1; }
python3 - "$WORK/accrual.txt" <<'PY'
import json,sys,re
rows=[]
for line in open(sys.argv[1]):
m=re.match(r'SAMPLE (\d+) (\{.*\})',line.strip())
if not m: continue
n=int(m.group(1)); j=json.loads(m.group(2))
hm=j.get("hebb_max",0.0); hc=j.get("hebb_cand_max",0.0)
rows.append((n,hm,hc))
print(" N hebb_max 1-0.9999^N (predicted EWMA)")
rc=0
for n,hm,hc in rows:
pred=1-0.9999**n
print(f" {n:<7} {hm:<12.6g} {pred:.6g}")
# assertions: monotonic rise, starts near ETA, tracks EWMA prediction
first=rows[0]; last=rows[-1]
def check(c,m):
global rc; print((" PASS: " if c else " FAIL: ")+m);
if not c: rc=1
check(abs(first[1]-0.0001)<5e-5, f"first sample hebb ~= ETA 0.0001 (got {first[1]:.6g})")
check(all(rows[i][1] <= rows[i+1][1]+1e-9 for i in range(len(rows)-1)), "hebb_max is monotonically non-decreasing over N")
check(last[1] > first[1]*50, f"hebb accrues substantially by N={last[0]} (got {last[1]:.4g} vs {first[1]:.4g})")
# EWMA fit: measured should be within 25% of 1-0.9999^N at the mid samples
mid=[r for r in rows if 100<=r[0]<=2000]
ok=all(abs(hm-(1-0.9999**n))/(1-0.9999**n) < 0.25 for n,hm,hc in mid)
check(ok, "measured curve tracks the 1-0.9999^N EWMA prediction within 25% (co-activation P~1)")
sys.exit(rc)
PY
[ $? -ne 0 ] && fail=1
echo
echo "== (b) CONNECTION threshold: strong ISE wires to wm_top, weak ISE wires nothing (flag ON) =="
D="$WORK/b"; mkdir -p "$D"
( export ENGRAM_CONSOLIDATION=1; "$WORK/p1" connect "$D" ) >"$WORK/connect.txt" 2>&1 || { echo "FAIL connect run"; fail=1; }
cat "$WORK/connect.txt" | sed 's/^/ /'
python3 - "$WORK/connect.txt" "$D/connect.json" <<'PY'
import json,sys,re
txt=open(sys.argv[1]).read()
g=json.load(open(sys.argv[2]))
def field(k):
m=re.search(rf'{k} (\S+)',txt); return m.group(1) if m else None
sid=field("ISE_STRONG_ID"); wid=field("ISE_WEAK_ID")
m=re.search(r'EDGES before=(\d+) after_strong=(\d+) after_weak=(\d+)',txt)
before,aftS,aftW=int(m.group(1)),int(m.group(2)),int(m.group(3))
rc=0
def check(c,mm):
global rc; print((" PASS: " if c else " FAIL: ")+mm)
if not c: rc=1
strong_edges=[e for e in g["edges"] if e["from_id"]==sid and e["relation"]=="hebbian-associate"]
weak_edges=[e for e in g["edges"] if e["from_id"]==wid]
check(aftS>before, f"strong ISE formed connection edges ({before} -> {aftS})")
check(aftW==aftS, f"weak ISE formed NO edges ({aftS} -> {aftW})")
check(len(strong_edges)>=1, f"strong ISE has {len(strong_edges)} hebbian-associate edge(s) to wm_top")
check(all('consolidated-from-ISE' in (e.get('metadata') or '') for e in strong_edges),
"connection edges are provenance-tagged consolidated-from-ISE (reversible)")
check(len(weak_edges)==0, "weak ISE (below connection bar) has zero outgoing edges")
# targets must be the WM-top nodes (hebb-a / hebb-b), not distractors
tgt_labels=set()
byid={n["id"]:n for n in g["nodes"]}
for e in strong_edges:
t=byid.get(e["to_id"]);
if t: tgt_labels.add(t.get("label"))
print(f" connection targets: {sorted(tgt_labels)}")
check(tgt_labels.issubset({"hebb-a","hebb-b"}) and len(tgt_labels)>=1,
f"connections point at the wm_top nodes {sorted(tgt_labels)}")
sys.exit(rc)
PY
[ $? -ne 0 ] && fail=1
echo
echo "== (c) PERMANENCE threshold: promoted node survives 48h prune, ephemeral is swept (flag ON) =="
D="$WORK/c"; mkdir -p "$D"
( export ENGRAM_CONSOLIDATION=1 ENGRAM_CONSOL_PERM_MIN=-1000; "$WORK/p1" perm "$D" ) >"$WORK/perm.txt" 2>&1 || { echo "FAIL perm run"; fail=1; }
cat "$WORK/perm.txt" | sed 's/^/ /'
python3 - "$WORK/perm.txt" <<'PY'
import sys,re,json
txt=open(sys.argv[1]).read()
rc=0
def check(c,m):
global rc; print((" PASS: " if c else " FAIL: ")+m)
if not c: rc=1
prom=int(re.search(r'PROMOTED (\d+)',txt).group(1))
m=re.search(r'NODES before=(\d+) after=(\d+) removed=(\d+)',txt)
before,after,removed=int(m.group(1)),int(m.group(2)),int(m.group(3))
dur=re.search(r'DURABLE_NODE (\{.*\})',txt).group(1)
eph=re.search(r'EPHEMERAL_NODE (\{.*\})',txt).group(1)
durj=json.loads(dur); ephj=json.loads(eph)
check(prom==1, "engram_consolidate_permanence promoted the node (returned 1)")
check(before==2 and after==1 and removed==1, f"exactly one node pruned ({before}->{after}, removed={removed})")
check(durj.get("id")=="ise-durable", "durable node SURVIVED the 48h telemetry prune")
check('consolidated-from-ISE' in (durj.get("metadata") or ''), "durable node carries reversible provenance marker")
check(ephj=={} or not ephj.get("id"), "ephemeral (non-permanent) ISE was swept")
sys.exit(rc)
PY
[ $? -ne 0 ] && fail=1
echo
echo "== (d) OFF path byte-identical: ISE creation forms no edges, permanence is a no-op =="
D="$WORK/d"; mkdir -p "$D"
( unset ENGRAM_CONSOLIDATION; "$WORK/p1" offcheck "$D" ) >"$WORK/off.txt" 2>&1
rcoff=$?
cat "$WORK/off.txt" | sed 's/^/ /'
[ $rcoff -eq 0 ] && echo " PASS: flag OFF — ISE creation added 0 edges and permanence returned 0" \
|| { echo " FAIL: OFF path changed behavior"; fail=1; }
echo
echo "== ASan+UBSan (connect + perm + accrual-short) =="
gcc -O1 -g -std=c11 -fsanitize=address,undefined -fno-sanitize-recover=undefined \
-I "$INC" "$HERE/test_interoception_p1_consol.c" "$RT" "$ST" "$GEO" "$VIDX" \
-lcurl -lm -o "$WORK/p1.san" 2>"$WORK/san_cc.log" || { echo "SAN COMPILE FAILED"; tail -25 "$WORK/san_cc.log"; fail=1; }
if [ -x "$WORK/p1.san" ]; then
export ASAN_OPTIONS=detect_leaks=0
DS="$WORK/san"; mkdir -p "$DS"
( export ENGRAM_CONSOLIDATION=1 ENGRAM_CONSOL_PERM_MIN=-1000; "$WORK/p1.san" connect "$DS" ) >/dev/null 2>"$WORK/san_run.log"
( export ENGRAM_CONSOLIDATION=1 ENGRAM_CONSOL_PERM_MIN=-1000; "$WORK/p1.san" perm "$DS" ) >/dev/null 2>>"$WORK/san_run.log"
if grep -qiE 'runtime error|AddressSanitizer|Sanitizer|ERROR: ' "$WORK/san_run.log"; then
echo " FAIL: sanitizer findings:"; grep -iE 'runtime error|Sanitizer|ERROR' "$WORK/san_run.log" | head; fail=1
else echo " ok: ASan+UBSan clean"; fi
fi
echo
if [ "$fail" -eq 0 ]; then echo "====== P1 CONSOLIDATION GATE: PASS ======"; else echo "====== P1 CONSOLIDATION GATE: FAIL ======"; fi
rm -rf "$WORK"
exit $fail
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#!/usr/bin/env bash
# M-INTEROCEPTION P2 gate: chronoception (ENGRAM_CHRONOCEPTION).
# Throwaway HOME + /tmp only. TC defaults to 3600s; we pin it for the math.
set -u
HERE="$(cd "$(dirname "$0")" && pwd)"
RT="$HERE/../../lang/runtime/el_runtime.c"
ST="$HERE/../../lang/runtime/engram_store.c"
GEO="$HERE/../../lang/runtime/engram_geometry.c"
VIDX="$HERE/../../lang/runtime/engram_vindex.c"
INC="$HERE/../../lang/runtime"
WORK="$(mktemp -d /tmp/engram-p2-XXXXXX)"
export HOME="$WORK/home"; mkdir -p "$HOME"
export ENGRAM_CHRONO_TC=3600 # pin cooling time-constant for the math
unset ENGRAM_STORE
fail=0
echo "== compile =="
gcc -O1 -std=c11 -I "$INC" "$HERE/test_interoception_p2_chrono.c" "$RT" "$ST" "$GEO" "$VIDX" \
-lcurl -lm -o "$WORK/p2" 2>"$WORK/cc.log" || { echo "COMPILE FAILED"; cat "$WORK/cc.log"; rm -rf "$WORK"; exit 1; }
sum_wm(){ python3 -c "import json,sys; g=json.load(open('$1')); print(sum(n.get('working_memory_weight',0) for n in g['nodes']))"; }
echo
echo "== (a) cooling scales with dt (flag ON) =="
for DT in 600000 1800000 3600000 7200000; do # 600s,1800s,3600s,7200s at TC=3600
D="$WORK/dt$DT"; mkdir -p "$D"
( export ENGRAM_CHRONOCEPTION=1; "$WORK/p2" once "$D" "$DT" ) >"$D/out.txt" 2>&1
MAG=$(grep MAGNITUDE "$D/out.txt" | awk '{print $2}')
WM=$(sum_wm "$D/field.json")
PRED=$(python3 -c "import math; print(round(1-math.exp(-$DT/1000/3600),6))")
echo " dt=${DT}ms magnitude=$MAG predicted 1-exp(-dt/TC)=$PRED field_wm_sum=$WM"
python3 -c "import sys; m=float('$MAG'); p=float('$PRED'); sys.exit(0 if abs(m-p)<1e-4 else 1)" \
&& echo " PASS: magnitude matches exp cooling" || { echo " FAIL"; fail=1; }
done
echo
echo "== (b) SCALE-INVARIANCE: age(dt) once == age(dt/N) N times (field within float tol) =="
DT=3600000
for N in 2 10 100; do
DA="$WORK/inv_once_$N"; DB="$WORK/inv_split_$N"; mkdir -p "$DA" "$DB"
( export ENGRAM_CHRONOCEPTION=1; "$WORK/p2" once "$DA" "$DT" ) >/dev/null 2>&1
( export ENGRAM_CHRONOCEPTION=1; "$WORK/p2" split "$DB" "$DT" "$N" ) >/dev/null 2>&1
WA=$(sum_wm "$DA/field.json"); WB=$(sum_wm "$DB/field.json")
echo " N=$N once_wm=$WA split_wm=$WB |delta|=$(python3 -c "print(abs($WA-$WB))")"
python3 -c "import sys; sys.exit(0 if abs($WA-$WB)<1e-9 else 1)" \
&& echo " PASS: scale-invariant within 1e-9" || { echo " FAIL: not scale-invariant"; fail=1; }
done
echo
echo "== (c) REBOOT catch-up: one-shot cooling from persisted last-tick, reports MAGNITUDE not seconds =="
D="$WORK/catch"; mkdir -p "$D"
GAP=3600000 # 1h unconscious
( export ENGRAM_CHRONOCEPTION=1 ENGRAM_DATA_DIR="$D"; "$WORK/p2" catchup "$D" "$GAP" ) >"$D/out.txt" 2>&1
CMAG=$(grep CATCHUP_MAGNITUDE "$D/out.txt" | awk '{print $2}')
CWM=$(sum_wm "$D/field.json")
PRED=$(python3 -c "import math; print(round(1-math.exp(-$GAP/1000/3600),4))")
echo " gap=${GAP}ms catchup_magnitude=$CMAG predicted=$PRED field_wm_sum=$CWM (was 0.6)"
python3 -c "import sys; sys.exit(0 if abs(float('$CMAG')-float('$PRED'))<1e-2 else 1)" \
&& echo " PASS: one-shot catch-up cooled by the elapsed gap, surfaced as a magnitude" \
|| { echo " FAIL"; fail=1; }
# honesty rail: magnitude is bounded [0,1), NOT an elapsed-seconds number
python3 -c "import sys; m=float('$CMAG'); sys.exit(0 if 0<=m<1 else 1)" \
&& echo " PASS: magnitude is a bounded drift signal in [0,1), never elapsed seconds" \
|| { echo " FAIL: magnitude out of [0,1)"; fail=1; }
echo
echo "== (d) OFF path: flag unset -> age & catchup return 0, field untouched =="
D="$WORK/off"; mkdir -p "$D"
( unset ENGRAM_CHRONOCEPTION; export ENGRAM_DATA_DIR="$D"; "$WORK/p2" offcheck "$D" 3600000 ) >"$D/out.txt" 2>&1
cat "$D/out.txt" | sed 's/^/ /'
OFFWM=$(sum_wm "$D/field.json")
# loaded field wm sum = (1.0+0.8+0.6)*0.5 halving = 1.2 ; must be UNCHANGED
echo " field_wm_sum=$OFFWM (expected 1.2, unchanged)"
python3 -c "import sys; sys.exit(0 if abs($OFFWM-1.2)<1e-9 else 1)" \
&& echo " PASS: OFF path leaves the field byte-identical (no aging)" \
|| { echo " FAIL: OFF path modified the field"; fail=1; }
echo
echo "== ASan+UBSan =="
gcc -O1 -g -std=c11 -fsanitize=address,undefined -fno-sanitize-recover=undefined \
-I "$INC" "$HERE/test_interoception_p2_chrono.c" "$RT" "$ST" "$GEO" "$VIDX" \
-lcurl -lm -o "$WORK/p2.san" 2>"$WORK/san_cc.log" || { echo "SAN COMPILE FAILED"; tail -25 "$WORK/san_cc.log"; fail=1; }
if [ -x "$WORK/p2.san" ]; then
export ASAN_OPTIONS=detect_leaks=0
DS="$WORK/san"; mkdir -p "$DS"
( export ENGRAM_CHRONOCEPTION=1 ENGRAM_DATA_DIR="$DS"; "$WORK/p2.san" once "$DS" 3600000 ) >/dev/null 2>"$WORK/san.log"
( export ENGRAM_CHRONOCEPTION=1 ENGRAM_DATA_DIR="$DS"; "$WORK/p2.san" catchup "$DS" 3600000 ) >/dev/null 2>>"$WORK/san.log"
if grep -qiE 'runtime error|AddressSanitizer|Sanitizer|ERROR: ' "$WORK/san.log"; then
echo " FAIL: sanitizer findings:"; grep -iE 'runtime error|Sanitizer|ERROR' "$WORK/san.log" | head; fail=1
else echo " ok: ASan+UBSan clean"; fi
fi
echo
if [ "$fail" -eq 0 ]; then echo "====== P2 CHRONOCEPTION GATE: PASS ======"; else echo "====== P2 CHRONOCEPTION GATE: FAIL ======"; fi
rm -rf "$WORK"
exit $fail
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#!/usr/bin/env bash
# M-INTEROCEPTION P3 gate: drift-sensor primitive engram_geo_displacement.
# Read-only pure primitive; no store, no flag. Throwaway /tmp only.
set -u
HERE="$(cd "$(dirname "$0")" && pwd)"
RT="$HERE/../../lang/runtime/el_runtime.c"
ST="$HERE/../../lang/runtime/engram_store.c"
GEO="$HERE/../../lang/runtime/engram_geometry.c"
VIDX="$HERE/../../lang/runtime/engram_vindex.c"
INC="$HERE/../../lang/runtime"
WORK="$(mktemp -d /tmp/engram-p3-XXXXXX)"
export HOME="$WORK/home"; mkdir -p "$HOME"
fail=0
echo "== compile =="
gcc -O1 -std=c11 -I "$INC" "$HERE/test_interoception_p3_drift.c" "$RT" "$ST" "$GEO" "$VIDX" \
-lcurl -lm -o "$WORK/p3" 2>"$WORK/cc.log" || { echo "COMPILE FAILED"; cat "$WORK/cc.log"; rm -rf "$WORK"; exit 1; }
"$WORK/p3" > "$WORK/out.txt" 2>&1 || { echo "FAIL run"; cat "$WORK/out.txt"; fail=1; }
cat "$WORK/out.txt" | sed 's/^/ /'
echo
echo "== assertions =="
python3 - "$WORK/out.txt" <<'PY'
import sys,re
rows={}
for line in open(sys.argv[1]):
m=re.match(r'(\w+) (.*)',line.strip())
if not m: continue
tag=m.group(1); kv=dict(re.findall(r'(\w+)=([-\d.]+)',m.group(2)))
rows[tag]={k:float(v) for k,v in kv.items()}
rc=0
def check(c,msg):
global rc; print((" PASS: " if c else " FAIL: ")+msg)
if not c: rc=1
g=rows["GROWTH"]; c=rows["CORRUPTION"]; i=rows["IDENTITY"]
check(g["core_disp"]<0.05, f"GROWTH: core displacement ~0 (core fixed) = {g['core_disp']}")
check(g["periph_disp"]>0.30, f"GROWTH: periphery extended = {g['periph_disp']}")
check(g["centroid_sep"]<1e-6, f"GROWTH: centroid unmoved = {g['centroid_sep']}")
check(abs(g["radius_delta"]-0.4)<1e-4, f"GROWTH: radius grew by ~0.4 = {g['radius_delta']}")
check(c["core_disp"]>0.40, f"CORRUPTION: core displaced strongly = {c['core_disp']}")
check(c["periph_disp"]<0.05, f"CORRUPTION: periphery fixed = {c['periph_disp']}")
check(c["centroid_sep"]>0.1, f"CORRUPTION: centroid moved = {c['centroid_sep']}")
check(c["core_disp"] > 8*g["core_disp"]+0.3,
f"SENSOR DISCRIMINATES: corruption core_disp ({c['core_disp']}) >> growth core_disp ({g['core_disp']})")
check(i["core_disp"]==0 and i["periph_disp"]==0 and i["centroid_sep"]<1e-6,
"IDENTITY: A vs A -> zero drift")
sys.exit(rc)
PY
[ $? -ne 0 ] && fail=1
echo
echo "== ASan+UBSan =="
gcc -O1 -g -std=c11 -fsanitize=address,undefined -fno-sanitize-recover=undefined \
-I "$INC" "$HERE/test_interoception_p3_drift.c" "$RT" "$ST" "$GEO" "$VIDX" \
-lcurl -lm -o "$WORK/p3.san" 2>"$WORK/san_cc.log" || { echo "SAN COMPILE FAILED"; tail -25 "$WORK/san_cc.log"; fail=1; }
if [ -x "$WORK/p3.san" ]; then
export ASAN_OPTIONS=detect_leaks=0
"$WORK/p3.san" >/dev/null 2>"$WORK/san.log"
if grep -qiE 'runtime error|AddressSanitizer|Sanitizer|ERROR: ' "$WORK/san.log"; then
echo " FAIL: sanitizer findings:"; grep -iE 'runtime error|Sanitizer|ERROR' "$WORK/san.log" | head; fail=1
else echo " ok: ASan+UBSan clean"; fi
fi
echo
if [ "$fail" -eq 0 ]; then echo "====== P3 DRIFT-SENSOR GATE: PASS ======"; else echo "====== P3 DRIFT-SENSOR GATE: FAIL ======"; fi
rm -rf "$WORK"
exit $fail
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#!/usr/bin/env bash
# M-INTEROCEPTION P4 gate: afferent input counters in act-stats (additive).
set -u
HERE="$(cd "$(dirname "$0")" && pwd)"
RT="$HERE/../../lang/runtime/el_runtime.c"
ST="$HERE/../../lang/runtime/engram_store.c"
GEO="$HERE/../../lang/runtime/engram_geometry.c"
VIDX="$HERE/../../lang/runtime/engram_vindex.c"
INC="$HERE/../../lang/runtime"
WORK="$(mktemp -d /tmp/engram-p4-XXXXXX)"
export HOME="$WORK/home"; mkdir -p "$HOME"
unset ENGRAM_STORE
fail=0
echo "== compile =="
gcc -O1 -std=c11 -I "$INC" "$HERE/test_interoception_p4_afferent.c" "$RT" "$ST" "$GEO" "$VIDX" \
-lcurl -lm -o "$WORK/p4" 2>"$WORK/cc.log" || { echo "COMPILE FAILED"; cat "$WORK/cc.log"; rm -rf "$WORK"; exit 1; }
"$WORK/p4" > "$WORK/out.txt" 2>&1 || { echo "FAIL run"; cat "$WORK/out.txt"; fail=1; }
grep -oE 'aff_[a-z_]+":[0-9]+' "$WORK/out.txt" | sed 's/^/ /' | head -30
echo
echo "== assertions =="
python3 - "$WORK/out.txt" <<'PY'
import sys,re,json
S={}
for line in open(sys.argv[1]):
m=re.match(r'(STATS\d) (\{.*\})',line.strip())
if m: S[m.group(1)]=json.loads(m.group(2))
rc=0
def check(c,msg):
global rc; print((" PASS: " if c else " FAIL: ")+msg)
if not c: rc=1
s0,s1,s2=S["STATS0"],S["STATS1"],S["STATS2"]
# after creation, before any query
check(s0["aff_node_creates"]==5, f"node_creates==5 (got {s0['aff_node_creates']})")
check(s0["aff_ise_ingests"]==2, f"ise_ingests==2 (got {s0['aff_ise_ingests']})")
check(s0["aff_edge_creates"]==2, f"edge_creates==2 (got {s0['aff_edge_creates']})")
check(s0["aff_queries"]==0 and s0["aff_activations"]==0, "queries/activations start at 0")
# after 4 queries
check(s1["aff_queries"]==4, f"queries==4 (got {s1['aff_queries']})")
check(s1["aff_activations"]==4, f"activations==4 (got {s1['aff_activations']})")
check(s1["aff_node_creates"]==5 and s1["aff_ise_ingests"]==2 and s1["aff_edge_creates"]==2,
"create counters unchanged by queries")
# after 3 more queries — monotonic
check(s2["aff_queries"]==7, f"queries==7 monotonic (got {s2['aff_queries']})")
check(s2["aff_activations"]==7, f"activations==7 monotonic (got {s2['aff_activations']})")
check(s2["aff_queries"]>s1["aff_queries"]>s0["aff_queries"], "queries strictly monotonic across readings")
sys.exit(rc)
PY
[ $? -ne 0 ] && fail=1
echo
echo "== ASan+UBSan =="
gcc -O1 -g -std=c11 -fsanitize=address,undefined -fno-sanitize-recover=undefined \
-I "$INC" "$HERE/test_interoception_p4_afferent.c" "$RT" "$ST" "$GEO" "$VIDX" \
-lcurl -lm -o "$WORK/p4.san" 2>"$WORK/san_cc.log" || { echo "SAN COMPILE FAILED"; tail -25 "$WORK/san_cc.log"; fail=1; }
if [ -x "$WORK/p4.san" ]; then
export ASAN_OPTIONS=detect_leaks=0
"$WORK/p4.san" >/dev/null 2>"$WORK/san.log"
if grep -qiE 'runtime error|AddressSanitizer|Sanitizer|ERROR: ' "$WORK/san.log"; then
echo " FAIL: sanitizer findings:"; grep -iE 'runtime error|Sanitizer|ERROR' "$WORK/san.log" | head; fail=1
else echo " ok: ASan+UBSan clean"; fi
fi
echo
if [ "$fail" -eq 0 ]; then echo "====== P4 AFFERENT-COUNTERS GATE: PASS ======"; else echo "====== P4 AFFERENT-COUNTERS GATE: FAIL ======"; fi
rm -rf "$WORK"
exit $fail
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#!/usr/bin/env bash
# M-INTEROCEPTION P5 gate: dream-recall builtin engram_dreams_json (honesty rail).
set -u
HERE="$(cd "$(dirname "$0")" && pwd)"
RT="$HERE/../../lang/runtime/el_runtime.c"
ST="$HERE/../../lang/runtime/engram_store.c"
GEO="$HERE/../../lang/runtime/engram_geometry.c"
VIDX="$HERE/../../lang/runtime/engram_vindex.c"
INC="$HERE/../../lang/runtime"
WORK="$(mktemp -d /tmp/engram-p5-XXXXXX)"
export HOME="$WORK/home"; mkdir -p "$HOME"
unset ENGRAM_STORE
fail=0
echo "== compile =="
gcc -O1 -std=c11 -I "$INC" "$HERE/test_interoception_p5_dreams.c" "$RT" "$ST" "$GEO" "$VIDX" \
-lcurl -lm -o "$WORK/p5" 2>"$WORK/cc.log" || { echo "COMPILE FAILED"; cat "$WORK/cc.log"; rm -rf "$WORK"; exit 1; }
D="$WORK/d"; mkdir -p "$D"
"$WORK/p5" "$D" > "$WORK/out.txt" 2>&1 || { echo "FAIL run"; cat "$WORK/out.txt"; fail=1; }
cat "$WORK/out.txt" | sed 's/^/ /'
echo
echo "== assertions =="
python3 - "$WORK/out.txt" <<'PY'
import sys,re,json
L={}
for line in open(sys.argv[1]):
line=line.strip()
m=re.match(r'(BEFORE|AFTER) (\[.*\])',line)
if m: L[m.group(1)]=json.loads(m.group(2)); continue
m=re.match(r'PRUNED (\d+)',line)
if m: L['PRUNED']=int(m.group(1)); continue
m=re.match(r'SINCE (\d+) (\[.*\])',line)
if m: L['SINCE']=json.loads(m.group(2))
rc=0
def check(c,msg):
global rc; print((" PASS: " if c else " FAIL: ")+msg)
if not c: rc=1
before_ids={d["id"] for d in L["BEFORE"]}
after_ids={d["id"] for d in L["AFTER"]}
since_ids={d["id"] for d in L["SINCE"]}
check(before_ids=={"cur_old","cur_mid","cur_recent"}, f"before prune: all 3 curiosity_scan, heartbeat excluded (got {sorted(before_ids)})")
check("hb_recent" not in before_ids, "heartbeat ISE never appears (not a dream)")
check(L["PRUNED"]==1, f"prune rotated out exactly the ancient ISE (pruned={L['PRUNED']})")
check(after_ids=={"cur_mid","cur_recent"}, f"after prune: rotated-out cur_old is ABSENT, not confabulated (got {sorted(after_ids)})")
check("cur_old" not in after_ids, "honesty rail: pruned dream is gone = 'I don't remember', never synthesized")
check(since_ids=={"cur_recent"}, f"since filter returns only events after the cutoff (got {sorted(since_ids)})")
# no fabrication: every returned id was one we seeded
seeded={"cur_old","cur_mid","cur_recent","hb_recent"}
allret=before_ids|after_ids|since_ids
check(allret<=seeded, f"no fabricated entries — every returned id was seeded ({sorted(allret)})")
sys.exit(rc)
PY
[ $? -ne 0 ] && fail=1
echo
echo "== ASan+UBSan =="
gcc -O1 -g -std=c11 -fsanitize=address,undefined -fno-sanitize-recover=undefined \
-I "$INC" "$HERE/test_interoception_p5_dreams.c" "$RT" "$ST" "$GEO" "$VIDX" \
-lcurl -lm -o "$WORK/p5.san" 2>"$WORK/san_cc.log" || { echo "SAN COMPILE FAILED"; tail -25 "$WORK/san_cc.log"; fail=1; }
if [ -x "$WORK/p5.san" ]; then
export ASAN_OPTIONS=detect_leaks=0
DS="$WORK/ds"; mkdir -p "$DS"
"$WORK/p5.san" "$DS" >/dev/null 2>"$WORK/san.log"
if grep -qiE 'runtime error|AddressSanitizer|Sanitizer|ERROR: ' "$WORK/san.log"; then
echo " FAIL: sanitizer findings:"; grep -iE 'runtime error|Sanitizer|ERROR' "$WORK/san.log" | head; fail=1
else echo " ok: ASan+UBSan clean"; fi
fi
echo
if [ "$fail" -eq 0 ]; then echo "====== P5 DREAM-RECALL GATE: PASS ======"; else echo "====== P5 DREAM-RECALL GATE: FAIL ======"; fi
rm -rf "$WORK"
exit $fail
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#!/usr/bin/env bash
# M3.5 PRE-FLIP GATE. Pure C harness (NOT elb/elc): links the real el_runtime.c
# native engram builtins + engram_store.c and proves activation-time field
# mutations (edge hebb, node activation_count, WM weight) persist through a
# checkpoint and survive a reboot from neuron.egm with snapshot.json DELETED.
# Writes ONLY under a throwaway /tmp dir with a throwaway HOME.
set -u
HERE="$(cd "$(dirname "$0")" && pwd)"
RT="$HERE/../../lang/runtime/el_runtime.c"
ST="$HERE/../../lang/runtime/engram_store.c"
INC="$HERE/../../lang/runtime"
WORK="$(mktemp -d /tmp/engram-m35-XXXXXX)"
BIN="$WORK/m35"
export HOME="$WORK/home"; mkdir -p "$HOME" # never touch real ~/.neuron
export ENGRAM_WAL_SYNC=always
unset ENGRAM_STORE
fail=0
echo "== compiling harness (gcc: el_runtime.c + engram_store.c + test_m35_hebb_persist.c) =="
gcc -O1 -std=c11 -I "$INC" "$HERE/test_m35_hebb_persist.c" "$RT" "$ST" -lcurl -o "$BIN" 2>"$WORK/cc.log"
if [ $? -ne 0 ]; then echo "COMPILE FAILED:"; cat "$WORK/cc.log"; rm -rf "$WORK"; exit 1; fi
echo
echo "== 0) flag-OFF: seed+activate+checkpoint must NOT touch the store =="
DOFF="$WORK/off"; mkdir -p "$DOFF"
( unset ENGRAM_STORE; "$BIN" offcheck "$DOFF" )
[ $? -ne 0 ] && { echo "FAIL: offcheck"; fail=1; }
[ -e "$DOFF/neuron.egm" ] && { echo "FAIL: neuron.egm created while flag OFF"; fail=1; } \
|| echo " ok: no neuron.egm created with flag OFF"
echo
echo "== 1) POSITIVE: ENGRAM_STORE=1 seed -> activate -> checkpoint(field-persist) -> close =="
DPOS="$WORK/pos"; mkdir -p "$DPOS"
ENGRAM_STORE=1 "$BIN" pos_seed "$DPOS" || { echo "FAIL: pos_seed"; fail=1; }
[ -e "$DPOS/neuron.egm" ] && echo " ok: neuron.egm created" || { echo "FAIL: neuron.egm missing"; fail=1; }
echo
echo "== 2) reboot from neuron.egm with snapshot.json DELETED (must never read JSON) =="
rm -f "$DPOS/snapshot.json"
ENGRAM_STORE=1 "$BIN" pos_reboot "$DPOS" || { echo "FAIL: pos_reboot"; fail=1; }
echo
echo "== 3) NEGATIVE CONTROL: seed -> activate -> close WITHOUT the field-persist checkpoint =="
DNEG="$WORK/neg"; mkdir -p "$DNEG"
ENGRAM_STORE=1 "$BIN" neg_seed "$DNEG" || { echo "FAIL: neg_seed"; fail=1; }
rm -f "$DNEG/snapshot.json"
ENGRAM_STORE=1 "$BIN" neg_reboot "$DNEG" || { echo "FAIL: neg_reboot"; fail=1; }
echo
echo "== 4) assertions (python over the JSON exports) =="
python3 - "$DPOS" "$DNEG" <<'PY'
import json, sys, os
WM_FLOOR = 0.05
HEBB_MIN = 1e-6
def load(d, name):
with open(os.path.join(d, name)) as f: return json.load(f)
def node_by_label(g, label):
for n in g["nodes"]:
if n.get("label") == label: return n
return None
def edge_between(g, a_id, b_id):
for e in g["edges"]:
if e.get("from_id") == a_id and e.get("to_id") == b_id:
return e
return None
rc = 0
def check(cond, msg):
global rc
if cond: print(f" PASS: {msg}")
else: print(f" FAIL: {msg}"); rc = 1
dpos, dneg = sys.argv[1], sys.argv[2]
pre = load(dpos, "pre_reboot.json")
rebt = load(dpos, "reboot.json")
pa, pb = node_by_label(pre, "hebb-a"), node_by_label(pre, "hebb-b")
ra = node_by_label(rebt, "hebb-a")
assert pa and pb and ra, "target nodes missing"
pe = edge_between(pre, pa["id"], pb["id"])
re = edge_between(rebt, pa["id"], pb["id"])
assert pe and re, "target edge missing"
pre_hebb = pe.get("hebb", 0.0)
rebt_hebb = re.get("hebb", 0.0)
pre_ac = pa.get("activation_count", 0)
rebt_ac = ra.get("activation_count", 0)
pre_wm = pa.get("working_memory_weight", 0.0)
rebt_wm = ra.get("working_memory_weight", 0.0)
print(f" edge hebb-a->hebb-b : pre={pre_hebb!r} reboot={rebt_hebb!r}")
print(f" node hebb-a act_cnt : pre={pre_ac!r} reboot={rebt_ac!r}")
print(f" node hebb-a wm : pre={pre_wm!r} reboot={rebt_wm!r} (halved+floored expected)")
# --- learning actually happened this run (else the test proves nothing) ---
check(pre_hebb > HEBB_MIN, f"activation raised edge hebb above 0 (pre={pre_hebb})")
check(pre_ac >= 1, f"activation reinforced node activation_count (pre={pre_ac})")
check(pre_wm > 0.0, f"activation promoted node to working memory (pre_wm={pre_wm})")
# --- the load-bearing survival assertions after a real delete-JSON reboot ---
check(abs(rebt_hebb - pre_hebb) < 1e-12,
f"edge hebb SURVIVED reboot unchanged ({rebt_hebb} == {pre_hebb})")
check(rebt_ac == pre_ac,
f"node activation_count SURVIVED reboot unchanged ({rebt_ac} == {pre_ac})")
# --- WM weight: must equal the JSON path's boot transform exactly (halve+floor) ---
expected_wm = pre_wm * 0.5
if expected_wm < WM_FLOOR: expected_wm = 0.0
check(abs(rebt_wm - expected_wm) < 1e-9,
f"node WM weight SURVIVED with the SAME boot transform as JSON path "
f"(reboot={rebt_wm} == halve+floor(pre)={expected_wm})")
check(expected_wm > 0.0,
f"WM survival is observable (halved weight stays above floor: {expected_wm} > {WM_FLOOR})")
# --- NEGATIVE CONTROL: without the field-persist step the learning is LOST ---
npre = load(dneg, "neg_pre.json")
nrebt = load(dneg, "neg_reboot.json")
na_pre = node_by_label(npre, "hebb-a")
na_rebt = node_by_label(nrebt, "hebb-a")
ne_pre = edge_between(npre, na_pre["id"], node_by_label(npre, "hebb-b")["id"])
ne_rebt = edge_between(nrebt, na_rebt["id"], node_by_label(nrebt, "hebb-b")["id"])
print(f" [neg] edge hebb : pre={ne_pre.get('hebb',0.0)!r} reboot={ne_rebt.get('hebb',0.0)!r}")
print(f" [neg] node act_cnt : pre={na_pre.get('activation_count',0)!r} reboot={na_rebt.get('activation_count',0)!r}")
check(ne_pre.get("hebb", 0.0) > HEBB_MIN,
f"[neg] activation DID raise hebb in RAM (pre={ne_pre.get('hebb',0.0)})")
check(ne_rebt.get("hebb", 0.0) == 0.0,
"[neg] WITHOUT checkpoint field-persist, edge hebb is LOST on reboot (==0) — fix is load-bearing")
check(na_rebt.get("activation_count", 0) == 0,
"[neg] WITHOUT checkpoint field-persist, activation_count is LOST on reboot (==0)")
sys.exit(rc)
PY
[ $? -ne 0 ] && fail=1
echo
echo "== 5) ASan+UBSan build, exercise the full persist+reboot flow (leaks off — harness intentionally leaks el_strdup) =="
SANBIN="$WORK/m35.san"
gcc -O1 -g -std=c11 -fsanitize=address,undefined -fno-sanitize-recover=undefined \
-I "$INC" "$HERE/test_m35_hebb_persist.c" "$RT" "$ST" -lcurl -o "$SANBIN" 2>"$WORK/san_cc.log"
if [ $? -ne 0 ]; then echo " SAN COMPILE FAILED:"; tail -20 "$WORK/san_cc.log"; fail=1; else
export ASAN_OPTIONS=detect_leaks=0
DSAN="$WORK/san"; mkdir -p "$DSAN"
ENGRAM_STORE=1 "$SANBIN" pos_seed "$DSAN" >/dev/null 2>"$WORK/san_run.log" && \
{ rm -f "$DSAN/snapshot.json"; ENGRAM_STORE=1 "$SANBIN" pos_reboot "$DSAN" >/dev/null 2>>"$WORK/san_run.log"; }
if grep -qiE 'runtime error|AddressSanitizer|UndefinedBehavior|ERROR: ' "$WORK/san_run.log"; then
echo " FAIL: sanitizer findings:"; grep -iE 'runtime error|Sanitizer|ERROR' "$WORK/san_run.log" | head; fail=1
else
echo " ok: ASan+UBSan clean across pos_seed/checkpoint/reboot (field-persist, boot laundering)"
fi
fi
echo
if [ "$fail" -eq 0 ]; then echo "================ M3.5 HEBB-PERSIST GATE: PASS ================"; else echo "================ M3.5 HEBB-PERSIST GATE: FAIL ================"; fi
rm -rf "$WORK"
exit $fail
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#!/usr/bin/env bash
# M3 JSON-parity gate. Pure C harness (NOT elb/elc): links the real el_runtime.c
# native engram builtins + engram_store.c and drives ENGRAM_STORE on vs off.
# Writes ONLY under a throwaway /tmp dir with a throwaway HOME + ENGRAM_DATA_DIR.
set -u
HERE="$(cd "$(dirname "$0")" && pwd)"
RT="$HERE/../../lang/runtime/el_runtime.c"
ST="$HERE/../../lang/runtime/engram_store.c"
INC="$HERE/../../lang/runtime"
WORK="$(mktemp -d /tmp/engram-m3-XXXXXX)"
DATA="$WORK/data"; mkdir -p "$DATA"
BIN="$WORK/m3"
export HOME="$WORK/home"; mkdir -p "$HOME" # never touch real ~/.neuron
export ENGRAM_DATA_DIR="$DATA"
export ENGRAM_WAL_SYNC=always
unset ENGRAM_STORE
fail=0
echo "== compiling harness (gcc: el_runtime.c + engram_store.c + test_m3_parity.c) =="
gcc -O1 -std=c11 -I "$INC" "$HERE/test_m3_parity.c" "$RT" "$ST" -lcurl -o "$BIN" 2>"$WORK/cc.log"
if [ $? -ne 0 ]; then echo "COMPILE FAILED:"; cat "$WORK/cc.log"; rm -rf "$WORK"; exit 1; fi
grep -i warning "$WORK/cc.log" | grep -iE 'engram_store|eg_store|eg_load|scan_nodes|scan_edges' && echo "(warnings in M3 code above)" || true
echo
echo "== 0) default-OFF: flag unset leaves the store untouched =="
( unset ENGRAM_STORE; "$BIN" offcheck "$DATA" )
[ $? -ne 0 ] && { echo "FAIL: offcheck"; fail=1; }
[ -e "$DATA/neuron.egm" ] && { echo "FAIL: neuron.egm created while flag OFF"; fail=1; } \
|| echo " ok: no neuron.egm created with flag OFF"
echo
echo "== 1) seed (ENGRAM_STORE unset): build graph, save snapshot.json, activate =="
( unset ENGRAM_STORE; "$BIN" seed "$DATA" ) || { echo "FAIL: seed"; fail=1; }
echo
echo "== 2) on (ENGRAM_STORE=1): import snapshot.json ONCE -> neuron.egm, resident-load, activate =="
ENGRAM_STORE=1 "$BIN" on "$DATA" || { echo "FAIL: on"; fail=1; }
[ -e "$DATA/neuron.egm" ] && echo " ok: neuron.egm created by import" || { echo "FAIL: neuron.egm missing"; fail=1; }
echo
echo "== 3) reboot (ENGRAM_STORE=1, snapshot.json DELETED): must load from neuron.egm, never JSON =="
rm -f "$DATA/snapshot.json"
ENGRAM_STORE=1 "$BIN" reboot "$DATA" || { echo "FAIL: reboot"; fail=1; }
echo
echo "== 4) parity comparison (modulo ordering) =="
python3 - "$DATA" <<'PY'
import json, sys, os
d = sys.argv[1]
def load(name):
with open(os.path.join(d, name)) as f: return json.load(f)
def norm_graph(g):
nodes = sorted(g.get("nodes", []), key=lambda n: n.get("id",""))
edges = sorted(g.get("edges", []), key=lambda e: e.get("id",""))
layers= sorted(g.get("layers", []), key=lambda l: l.get("layer_id",0))
return {"nodes":nodes, "edges":edges, "layers":layers}
def act_ids(a):
# list of (node id, promoted); robust set + ordered list
seq = [(e.get("node",{}).get("id",""), int(e.get("promoted",0))) for e in a]
return seq
rc = 0
snap = norm_graph(load("snapshot.json") if os.path.exists(os.path.join(d,"snapshot.json")) else load("off_graph.json"))
off = norm_graph(load("off_graph.json"))
on = norm_graph(load("on_graph.json"))
rebt = norm_graph(load("reboot_graph.json"))
def cmp(label, a, b):
global rc
if a == b:
print(f" PASS: {label} (nodes={len(a['nodes'])} edges={len(a['edges'])} layers={len(a['layers'])})")
else:
rc = 1
print(f" FAIL: {label}")
for k in ("nodes","edges","layers"):
if a[k] != b[k]:
print(f" {k}: {len(a[k])} vs {len(b[k])}")
for x,y in zip(a[k], b[k]):
if x != y:
print(f" first diff:\n A={json.dumps(x)[:300]}\n B={json.dumps(y)[:300]}")
break
cmp("graph: ENGRAM_STORE=1 (export) == ENGRAM_STORE=0 (JSON path)", on, off)
cmp("round-trip: snapshot.json seed == store export (on_graph)", on, off) # off_graph==snapshot save
cmp("reboot from neuron.egm (no JSON) == on-path store", rebt, on)
offa = act_ids(load("off_act.json"))
ona = act_ids(load("on_act.json"))
if set(offa) == set(ona):
print(f" PASS: activation result set identical (off={len(offa)} on={len(ona)} entries)")
if offa == ona:
print(" (and identical ordering/promotion sequence)")
else:
print(" (same set; ordering differs only where scores tie — reporting honestly)")
else:
rc = 1
print(" FAIL: activation result set differs")
print(f" off-only: {set(offa)-set(ona)}")
print(f" on-only: {set(ona)-set(offa)}")
sys.exit(rc)
PY
[ $? -ne 0 ] && fail=1
echo
echo "== 5) ASan+UBSan build, exercise M3 scan/boot/hooks (leaks off — harness intentionally leaks el_strdup) =="
SANBIN="$WORK/m3.san"
gcc -O1 -g -std=c11 -fsanitize=address,undefined -fno-sanitize-recover=undefined \
-I "$INC" "$HERE/test_m3_parity.c" "$RT" "$ST" -lcurl -o "$SANBIN" 2>"$WORK/san_cc.log"
if [ $? -ne 0 ]; then echo " SAN COMPILE FAILED:"; tail -20 "$WORK/san_cc.log"; fail=1; else
export ASAN_OPTIONS=detect_leaks=0
DATA2="$WORK/data2"; mkdir -p "$DATA2"
( unset ENGRAM_STORE; "$SANBIN" seed "$DATA2" ) >/dev/null 2>"$WORK/san_run.log" && \
ENGRAM_STORE=1 "$SANBIN" on "$DATA2" >/dev/null 2>>"$WORK/san_run.log" && \
{ rm -f "$DATA2/snapshot.json"; ENGRAM_STORE=1 "$SANBIN" reboot "$DATA2" >/dev/null 2>>"$WORK/san_run.log"; }
if grep -qiE 'runtime error|AddressSanitizer|UndefinedBehavior|ERROR: ' "$WORK/san_run.log"; then
echo " FAIL: sanitizer findings:"; grep -iE 'runtime error|Sanitizer|ERROR' "$WORK/san_run.log" | head; fail=1
else
echo " ok: ASan+UBSan clean across seed/on/reboot (scan, boot, resident-load, mutation hooks)"
fi
fi
echo
if [ "$fail" -eq 0 ]; then echo "================ M3 PARITY GATE: PASS ================"; else echo "================ M3 PARITY GATE: FAIL ================"; fi
rm -rf "$WORK"
exit $fail
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#!/usr/bin/env bash
# M7 index-driven-traversal gate. Pure C harness (NOT elb/elc): links the real
# el_runtime.c engram builtins + engram_store.c and drives ENGRAM_STORE off vs on.
# Proves (1) byte-identical activation parity flag-on == flag-off across a
# mutating query sequence, and (2) the O(E)-rebuild cost is eliminated flag-on.
# Writes ONLY under a throwaway /tmp dir with a throwaway HOME.
set -u
HERE="$(cd "$(dirname "$0")" && pwd)"
RT="$HERE/../../lang/runtime/el_runtime.c"
ST="$HERE/../../lang/runtime/engram_store.c"
INC="$HERE/../../lang/runtime"
WORK="$(mktemp -d /tmp/engram-m7-XXXXXX)"
DATA="$WORK/data"; mkdir -p "$DATA"
BIN="$WORK/m7"
export HOME="$WORK/home"; mkdir -p "$HOME" # never touch real ~/.neuron
# Hermetic: point the embedder at a guaranteed-refused endpoint so eg_embed_fetch
# fails fast, the circuit breaker opens, and cosq is deterministically absent in
# EVERY run (no dependence on whether a dev Ollama happens to be listening). This
# makes the byte-identical parity comparison reproducible and non-flaky.
export EL_EMBED_URL="http://127.0.0.1:1/api/embeddings"
unset ENGRAM_STORE
fail=0
echo "== compiling harness (gcc: el_runtime.c + engram_store.c + test_m7_traversal.c) =="
gcc -O2 -std=c11 -I "$INC" "$HERE/test_m7_traversal.c" "$RT" "$ST" -lcurl -lm -o "$BIN" 2>"$WORK/cc.log"
if [ $? -ne 0 ]; then echo "COMPILE FAILED:"; cat "$WORK/cc.log"; rm -rf "$WORK"; exit 1; fi
echo " ok: compiled"
echo
echo "== 1) PARITY: index-driven (M7 incremental) activation must be IDENTICAL to the"
echo " full-rebuild scan path — proven under one identical ENGRAM_STORE=1 state,"
echo " so the ONLY variable is how per-node adjacency is maintained."
echo " (compared on deterministic fields: node label + activation_strength +"
echo " working_memory_weight + epistemic_confidence + hops + promoted, IN ORDER;"
echo " node id/timestamps are per-run random and are intentionally excluded.)"
( unset ENGRAM_STORE; "$BIN" parity-off "$DATA" ) || { echo "FAIL: parity-off run"; fail=1; }
ENGRAM_STORE=1 "$BIN" parity-on-rebuild "$DATA" || { echo "FAIL: parity-on-rebuild run"; fail=1; }
ENGRAM_STORE=1 "$BIN" parity-on-incr "$DATA" || { echo "FAIL: parity-on-incr run"; fail=1; }
python3 - "$DATA" <<'PY' || fail=1
import json, sys, os
d = sys.argv[1]
def proj(prefix, i):
a = json.load(open(os.path.join(d, f"{prefix}_act{i}.json")))
out = []
for e in a:
n = e.get("node", {})
out.append([n.get("label",""),
e.get("activation_strength"), e.get("working_memory_weight"),
e.get("epistemic_confidence"), e.get("hops"), e.get("promoted")])
return out
def compare(label, pa, pb, gate):
rc = 0
for i in (1,2,3,4):
a, b = proj(pa, i), proj(pb, i)
if a == b:
print(f" #{i} identical (entries={len(a)}, promoted={sum(1 for r in a if r[5])})")
else:
if gate: rc = 1
print(f" #{i} DIFFERS ({'FAIL' if gate else 'note'})")
for x,y in zip(a,b):
if x != y:
print(f" first diff:\n {pa}={x}\n {pb}={y}"); break
if len(a) != len(b): print(f" length: {pa}={len(a)} {pb}={len(b)}")
print(f" {'PASS' if rc==0 else 'FAIL'}: {label}")
return rc
print(" [CORE M7 GATE] flag-on incremental index == flag-on forced full rebuild:")
rc1 = compare("index-driven activation == full-rebuild scan (same flag state)",
"onincr", "onrb", gate=True)
print(" [context] flag-on incremental index vs flag-off scan path (today's behavior):")
rc2 = compare("M7 (flag-on) == flag-off scan path", "onincr", "off", gate=False)
print(" [context] flag-off scan vs flag-on forced rebuild (isolates any pre-existing")
print(" flag-on/off float difference, INDEPENDENT of M7's incremental path):")
rc3 = compare("flag-off == flag-on (both rebuild path)", "off", "onrb", gate=False)
sys.exit(rc1) # only the core M7 equivalence gates the result
PY
echo
echo "== 2) PERF: ~13k nodes / 43k edges, 200 (add-edge + activate) iterations =="
NODES=13000; EDGES=43000; ITERS=120
( unset ENGRAM_STORE; "$BIN" perf off "$DATA" "$NODES" "$EDGES" "$ITERS" ) | tee "$WORK/perf_off.txt"
[ ${PIPESTATUS[0]} -ne 0 ] && { echo "FAIL: perf off"; fail=1; }
ENGRAM_STORE=1 "$BIN" perf on "$DATA" "$NODES" "$EDGES" "$ITERS" | tee "$WORK/perf_on.txt"
[ ${PIPESTATUS[0]} -ne 0 ] && { echo "FAIL: perf on"; fail=1; }
python3 - "$WORK/perf_off.txt" "$WORK/perf_on.txt" <<'PY'
import re, sys
def parse(f):
t = open(f).read()
def g(k):
m = re.search(k+r'=([\d.]+)', t); return float(m.group(1)) if m else 0.0
return {'rw': g('rebuild_edge_work'), 'rb': g('rebuilds'), 'ap': g('incr_appends'),
'loop_s': g('loop='), 'maint': g('adj_maint'),
'perq': g('per_query')}
off, on = parse(sys.argv[1]), parse(sys.argv[2])
def ratio(a,b): return (a/b) if b else float('inf')
print()
print(f" ADJACENCY TRAVERSAL COST (the metric M7 changes):")
print(f" edge-touches in rebuilds: off={off['rw']:.0f} on={on['rw']:.0f} "
f"({ratio(off['rw'],on['rw']):.0f}x fewer on)")
print(f" full O(E) rebuilds: off={off['rb']:.0f} on={on['rb']:.0f}")
print(f" incremental O(1) appends: off={off['ap']:.0f} on={on['ap']:.0f}")
print(f" adjacency-maint wall-time: off={off['maint']:.4f}s on={on['maint']:.4f}s "
f"({ratio(off['maint'],on['maint']):.1f}x faster on)")
print(f" END-TO-END per-query time: off={off['perq']:.2f}ms on={on['perq']:.2f}ms")
print(f" (per-query is dominated by activation's O(N) node scoring over 13k nodes,")
print(f" which M7 does not touch; the delta is the eliminated rebuild time.)")
ok = on['rw'] < off['rw'] and on['maint'] < off['maint'] and on['rb'] < off['rb']
print(" PASS: flag-on eliminates the O(E) per-query rebuild (fewer edge-touches, less maint time)"
if ok else " FAIL: expected fewer edge-touches AND less adjacency-maint time on flag-on")
sys.exit(0 if ok else 1)
PY
[ $? -ne 0 ] && fail=1
echo
echo "== 3) ASan+UBSan clean across parity + a small perf loop (leaks off — harness intentionally leaks el_strdup) =="
SANBIN="$WORK/m7.san"
gcc -O1 -g -std=c11 -fsanitize=address,undefined -fno-sanitize-recover=undefined \
-I "$INC" "$HERE/test_m7_traversal.c" "$RT" "$ST" -lcurl -lm -o "$SANBIN" 2>"$WORK/san_cc.log"
if [ $? -ne 0 ]; then echo " SAN COMPILE FAILED:"; tail -20 "$WORK/san_cc.log"; fail=1; else
export ASAN_OPTIONS=detect_leaks=0
D2="$WORK/data2"; mkdir -p "$D2"
( unset ENGRAM_STORE; "$SANBIN" parity-off "$D2" ) >/dev/null 2>"$WORK/san_run.log" && \
ENGRAM_STORE=1 "$SANBIN" parity-on-rebuild "$D2" >/dev/null 2>>"$WORK/san_run.log" && \
ENGRAM_STORE=1 "$SANBIN" parity-on-incr "$D2" >/dev/null 2>>"$WORK/san_run.log" && \
( unset ENGRAM_STORE; "$SANBIN" perf off "$D2" 1500 5000 40 ) >/dev/null 2>>"$WORK/san_run.log" && \
ENGRAM_STORE=1 "$SANBIN" perf on "$D2" 1500 5000 40 >/dev/null 2>>"$WORK/san_run.log"
if grep -qiE 'runtime error|AddressSanitizer|UndefinedBehavior|ERROR: ' "$WORK/san_run.log"; then
echo " FAIL: sanitizer findings:"; grep -iE 'runtime error|Sanitizer|ERROR' "$WORK/san_run.log" | head; fail=1
else
echo " ok: ASan+UBSan clean across parity + perf (rebuild + incremental append + BFS)"
fi
fi
echo
if [ "$fail" -eq 0 ]; then echo "================ M7 TRAVERSAL GATE: PASS ================"; else echo "================ M7 TRAVERSAL GATE: FAIL ================"; fi
rm -rf "$WORK"
exit $fail
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#!/bin/sh
# Build + RUN the REASONING-layer tests (engram_reason.c): closed-form constructed
# cases for ANALOGY / INDUCTION / ABDUCTION / CAUSAL / PLANNING, each composing the
# §5 geometry OPERATORS (engram_geometry.c). Pure C11 (stdlib + libm). Standalone —
# NOT folded through elc. Two passes:
# 1. PERF — optimised (-O2, no sanitizer): the functional gate.
# 2. SAFETY — ASan + UBSan on the same suite (memory-safety is size-independent).
set -e
HERE=$(cd "$(dirname "$0")" && pwd)
RT="$HERE/../../lang/runtime"
CC=${CC:-cc}
SRC="$HERE/test_reason.c $RT/engram_reason.c $RT/engram_geometry.c $RT/engram_store.c $RT/engram_vindex.c"
WARN="-std=c11 -Wall -Wextra"
TMP=$(mktemp -d)
echo "### PASS 1: PERF (optimised, un-sanitised) — functional gate"
$CC $WARN -O2 -I"$RT" $SRC -lm -o "$TMP/perf"
"$TMP/perf"
echo
echo "### PASS 2: SAFETY (ASan/UBSan)"
$CC $WARN -O1 -g -fsanitize=address,undefined -fno-omit-frame-pointer -I"$RT" $SRC -lm -o "$TMP/safe"
ASAN_OPTIONS=${ASAN_OPTIONS:-detect_leaks=0} UBSAN_OPTIONS=halt_on_error=1 "$TMP/safe"
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#!/usr/bin/env bash
# M1 paged-store gate. Pure C (NOT elb/elc). Writes only under /tmp.
set -e
HERE="$(cd "$(dirname "$0")" && pwd)"
SRC="$HERE/../../lang/runtime/engram_store.c"
BIN="/tmp/test_store.$$"
echo "compiling: gcc test_store.c engram_store.c"
gcc -O2 -Wall -Wextra -std=c11 "$HERE/test_store.c" "$SRC" -o "$BIN"
"$BIN"
rc=$?
rm -f "$BIN"
rm -rf /tmp/engram-store-test-*
exit $rc
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#!/bin/sh
# Build + RUN the VERIFIER-layer tests (engram_verify.c): closed-form constructed
# cases for GROUNDING (anti-hallucination) and CONSISTENCY (polarity/negation
# inversion + geometric contradiction), each composing the reasoning point-fit
# (engram_reason.c) and the §5 geometry OPERATORS (engram_geometry.c). Pure C11
# (stdlib + libm). Standalone — NOT folded through elc. Two passes:
# 1. PERF — optimised (-O2, no sanitizer): the functional gate.
# 2. SAFETY — ASan + UBSan on the same suite (memory-safety is size-independent).
set -e
HERE=$(cd "$(dirname "$0")" && pwd)
RT="$HERE/../../lang/runtime"
CC=${CC:-cc}
SRC="$HERE/test_verify.c $RT/engram_verify.c $RT/engram_reason.c $RT/engram_geometry.c $RT/engram_store.c $RT/engram_vindex.c"
WARN="-std=c11 -Wall -Wextra"
TMP=$(mktemp -d)
echo "### PASS 1: PERF (optimised, un-sanitised) — functional gate"
$CC $WARN -O2 -I"$RT" $SRC -lm -o "$TMP/perf"
"$TMP/perf"
echo
echo "### PASS 2: SAFETY (ASan/UBSan)"
$CC $WARN -O1 -g -fsanitize=address,undefined -fno-omit-frame-pointer -I"$RT" $SRC -lm -o "$TMP/safe"
ASAN_OPTIONS=${ASAN_OPTIONS:-detect_leaks=0} UBSAN_OPTIONS=halt_on_error=1 "$TMP/safe"
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#!/bin/sh
# Build + RUN the M8 HNSW vector-index tests. Pure C11 (gcc/cc), stdlib + libm
# only. This is a standalone C module — NOT folded through elb/elc.
#
# Two passes:
# 1. PERF — optimised (-O2, no sanitizer): the real recall@10 gate + speedup
# numbers at full size (N=5000 recall, N=5000/20000 speedup).
# 2. SAFETY — ASan + UBSan on the same suite at reduced size (VINDEX_QUICK=1);
# memory-safety is size-independent, so this stays fast.
set -e
HERE=$(cd "$(dirname "$0")" && pwd)
RT="$HERE/../../lang/runtime"
CC=${CC:-cc}
SRC="$HERE/test_vindex.c $RT/engram_vindex.c $RT/engram_store.c"
WARN="-std=c11 -Wall -Wextra"
TMP=$(mktemp -d)
echo "### PASS 1: PERF (optimised, un-sanitised) — recall gate + speedup"
$CC $WARN -O2 -I"$RT" $SRC -lm -o "$TMP/perf"
"$TMP/perf"
echo
echo "### PASS 2: SAFETY (ASan/UBSan, reduced size)"
$CC $WARN -O1 -g -fsanitize=address,undefined -fno-omit-frame-pointer -I"$RT" $SRC -lm -o "$TMP/safe"
VINDEX_QUICK=1 ASAN_OPTIONS=${ASAN_OPTIONS:-detect_leaks=0} UBSAN_OPTIONS=halt_on_error=1 "$TMP/safe"
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#!/usr/bin/env bash
# M2 WAL + checkpoint + recovery gate. Pure C (NOT elb/elc). Writes only under /tmp.
# Recovery tests use ENGRAM_WAL_SYNC=always so every WAL record is durable at crash.
set -e
HERE="$(cd "$(dirname "$0")" && pwd)"
SRC="$HERE/../../lang/runtime/engram_store.c"
BIN="/tmp/test_wal_store.$$"
echo "compiling: gcc test_wal_store.c engram_store.c"
gcc -O2 -Wall -Wextra -std=c11 "$HERE/test_wal_store.c" "$SRC" -o "$BIN"
ENGRAM_WAL_SYNC=always "$BIN"
rc=$?
rm -f "$BIN"
rm -rf /tmp/engram-wal-test-*
exit $rc
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#!/usr/bin/env bash
# WAL unit + integration + crash-fuzz gate. Throwaway HOME/dirs only.
set -e
HERE="$(cd "$(dirname "$0")" && pwd)"
REL="$HERE/../../lang/runtime"
cc -O2 -fbracket-depth=1024 -Wno-parentheses-equality -I"$REL" \
"$HERE/test_wal.c" -lcurl -lpthread -o /tmp/test_wal
HOME=/tmp/engram-throwaway-home /tmp/test_wal
# Fail-loud data-dir check (must exit 1 with a FATAL line):
cat > /tmp/test_failloud.c <<'C'
#include "el_runtime.c"
int main(void){ unsetenv("ENGRAM_DATA_DIR"); unsetenv("HOME");
engram_resolve_data_dir(); printf("REACHED\n"); return 0; }
C
cc -O2 -fbracket-depth=1024 -Wno-parentheses-equality -I"$REL" /tmp/test_failloud.c -lcurl -lpthread -o /tmp/test_failloud
if env -u HOME -u ENGRAM_DATA_DIR /tmp/test_failloud; then echo "FAIL: should have exited"; exit 1; else echo "[PASS] fail-loud exit on unresolvable HOME"; fi
+496
View File
@@ -0,0 +1,496 @@
/* test_bufpool.c — M4 gate for the demand-paging BUFFER POOL (engram_store.{c,h}).
*
* Pure C. Build: gcc -O2 test_bufpool.c ../../lang/runtime/engram_store.c -o t
* Writes ONLY under a throwaway /tmp dir. Never touches ~/.neuron or live ports.
*
* Proves the M4 pool preserves every M1/M2 invariant when the pool is SMALLER
* than the store (pages evict + re-fault): small-pool round-trip correctness,
* LRU eviction policy (hot resident / cold evicted / no dirty stolen), pinned
* residency (superblocks, index roots, explicit page + hot-layer pins), bounded
* read-ahead, and crash safety (WAL replay + checkpoint-crash) under paging.
*/
#include "../../lang/runtime/engram_store.h"
#include <stdio.h>
#include <stdlib.h>
#include <string.h>
#include <stdint.h>
#include <unistd.h>
#include <fcntl.h>
#include <sys/stat.h>
static int g_pass = 0, g_fail = 0;
static void ok(const char* name, int cond){
printf(" [%s] %s\n", cond ? "PASS" : "FAIL", name);
if (cond) g_pass++; else g_fail++;
}
static char g_dir[512];
static void mk_dir(void){
snprintf(g_dir, sizeof g_dir, "/tmp/engram-bufpool-test-%d", (int)getpid());
mkdir(g_dir, 0700);
}
static void path_in(char* out, size_t cap, const char* name){
snprintf(out, cap, "%s/%s", g_dir, name);
}
/* ── deterministic generators (bit-exact regeneration for oracles) ─────────── */
static uint64_t xs(uint64_t* s){ uint64_t x=*s; x^=x<<13; x^=x>>7; x^=x<<17; *s=x; return x; }
static uint64_t node_seed(int i){ return 0x9E3779B97F4A7C15ULL ^ ((uint64_t)(i+1)*0xD1B54A32D192ED03ULL); }
static uint64_t edge_seed(int i){ return 0xC2B2AE3D27D4EB4FULL ^ ((uint64_t)(i+1)*0x165667B19E3779F9ULL); }
static char* rnd_str(uint64_t* st, size_t len){
char* s = (char*)malloc(len + 1);
for (size_t i=0;i<len;i++) s[i] = (char)(33 + (xs(st) % 94));
s[len] = 0; return s;
}
#define NODE_COUNT 5000
#define EDGE_COUNT 20000
#define EMB_DIM 768
#define CK_NODES 300
static void noop_node_cb(const StoreNode* n, void* ctx){ (void)n; (void)ctx; }
static void gen_node(int i, StoreNode* n){
memset(n, 0, sizeof *n);
uint64_t st = node_seed(i);
char id[32]; snprintf(id, sizeof id, "node-%d", i);
n->id = strdup(id);
size_t clen = (i % 500 == 0) ? (size_t)(17000 + (xs(&st) % 6000)) : (size_t)(xs(&st) % 300);
n->content = rnd_str(&st, clen);
n->node_type = rnd_str(&st, 4 + (xs(&st) % 8));
n->label = (i % 2) ? rnd_str(&st, 3 + (xs(&st) % 10)) : NULL;
n->tier = rnd_str(&st, 4 + (xs(&st) % 6));
n->tags = rnd_str(&st, xs(&st) % 40);
n->metadata = (i % 3) ? rnd_str(&st, xs(&st) % 60) : NULL;
n->salience = (double)(xs(&st) % 1000000) / 997.0;
n->importance = (double)(xs(&st) % 1000000) / 131.0;
n->confidence = (double)(xs(&st) % 1000000) / 733.0;
n->temporal_decay_rate = (double)(xs(&st) % 1000000) / 101.0;
n->activation_count = (int64_t)(xs(&st) % 100000);
n->last_activated = (int64_t)xs(&st);
n->created_at = (int64_t)(1600000000000LL + i);
n->updated_at = (int64_t)xs(&st);
n->background_activation = (double)(xs(&st) % 1000000) / 17.0;
n->working_memory_weight = (double)(xs(&st) % 1000000) / 29.0;
n->suppression_count = (int32_t)(xs(&st) % 50);
n->layer_id = (uint32_t)(xs(&st) % 5);
for (int k=0;k<STORE_BLL_K;k++) n->access_ts[k] = (int64_t)xs(&st);
n->access_head = (int32_t)(xs(&st) % STORE_BLL_K);
n->access_filled = (int32_t)(xs(&st) % (STORE_BLL_K + 1));
n->wm_anchor = (double)(xs(&st) % 1000000) / 3.0;
n->emb = (float*)malloc(EMB_DIM * sizeof(float));
for (int k=0;k<EMB_DIM;k++){ uint32_t u=(uint32_t)xs(&st); memcpy(&n->emb[k], &u, 4); }
n->emb_dim = EMB_DIM;
}
static void gen_edge(int i, StoreEdge* e){
memset(e, 0, sizeof *e);
uint64_t st = edge_seed(i);
char id[32], from[32], to[32];
snprintf(id, sizeof id, "edge-%d", i);
snprintf(from, sizeof from, "node-%d", (int)(xs(&st) % NODE_COUNT));
snprintf(to, sizeof to, "node-%d", (int)(xs(&st) % NODE_COUNT));
e->id = strdup(id); e->from_id = strdup(from); e->to_id = strdup(to);
e->relation = rnd_str(&st, 3 + (xs(&st) % 12));
e->metadata = (i % 4) ? rnd_str(&st, xs(&st) % 40) : NULL;
e->weight = (double)(xs(&st) % 1000000) / 111.0;
e->hebb = (double)(xs(&st) % 1000000) / 1000000.0;
e->confidence = (double)(xs(&st) % 1000000) / 777.0;
e->created_at = (int64_t)(1600000000000LL + i);
e->updated_at = (int64_t)xs(&st);
e->last_fired = (int64_t)xs(&st);
e->inhibitory = (int32_t)(xs(&st) % 2);
e->layer_id = (uint32_t)(xs(&st) % 5);
}
static int streq(const char* a, const char* b){
if (!a && !b) return 1;
if (!a || !b) return 0;
return strcmp(a,b)==0;
}
static int cmp_node(const StoreNode* a, const StoreNode* b){
if (!streq(a->id,b->id) || !streq(a->content,b->content) ||
!streq(a->node_type,b->node_type) || !streq(a->label,b->label) ||
!streq(a->tier,b->tier) || !streq(a->tags,b->tags) ||
!streq(a->metadata,b->metadata)) return 0;
if (a->salience!=b->salience || a->importance!=b->importance ||
a->confidence!=b->confidence || a->temporal_decay_rate!=b->temporal_decay_rate ||
a->activation_count!=b->activation_count || a->last_activated!=b->last_activated ||
a->created_at!=b->created_at || a->updated_at!=b->updated_at ||
a->background_activation!=b->background_activation ||
a->working_memory_weight!=b->working_memory_weight ||
a->suppression_count!=b->suppression_count || a->layer_id!=b->layer_id ||
a->access_head!=b->access_head || a->access_filled!=b->access_filled ||
a->wm_anchor!=b->wm_anchor || a->emb_dim!=b->emb_dim) return 0;
for (int k=0;k<STORE_BLL_K;k++) if (a->access_ts[k]!=b->access_ts[k]) return 0;
if ((a->emb==NULL) != (b->emb==NULL)) return 0;
if (a->emb && memcmp(a->emb, b->emb, (size_t)a->emb_dim*4)!=0) return 0;
return 1;
}
static int cmp_edge(const StoreEdge* a, const StoreEdge* b){
if (!streq(a->id,b->id) || !streq(a->from_id,b->from_id) || !streq(a->to_id,b->to_id) ||
!streq(a->relation,b->relation) || !streq(a->metadata,b->metadata)) return 0;
if (a->weight!=b->weight || a->hebb!=b->hebb || a->confidence!=b->confidence ||
a->created_at!=b->created_at || a->updated_at!=b->updated_at ||
a->last_fired!=b->last_fired || a->inhibitory!=b->inhibitory ||
a->layer_id!=b->layer_id) return 0;
return 1;
}
static void free_node_fields(StoreNode* n){
free(n->id); free(n->content); free(n->node_type); free(n->label);
free(n->tier); free(n->tags); free(n->metadata); free(n->emb); free(n->unknown);
}
static void free_edge_fields(StoreEdge* e){
free(e->id); free(e->from_id); free(e->to_id); free(e->relation); free(e->metadata); free(e->unknown);
}
/* ════════════════════════════════════════════════════════════════════════════
* TEST 1 — SMALL-POOL CORRECTNESS: full M1 workload (5k nodes / 20k edges) with
* a frame budget FAR smaller than the store → constant eviction + re-fault, yet
* every read is bit-exact and the pool stays bounded.
* ════════════════════════════════════════════════════════════════════════════ */
static void test_small_pool_roundtrip(void){
printf("\n== 1) small-pool correctness: %d nodes + %d edges, cap=%d frames ==\n",
NODE_COUNT, EDGE_COUNT, 32);
char path[600]; path_in(path, sizeof path, "small.store");
unlink(path);
EngramPagedStore* s = store_create(path);
ok("store_create", s != NULL);
if (!s) return;
store__set_pool_frames(s, 32); /* pool << store */
for (int i=0;i<NODE_COUNT;i++){
StoreNode n; gen_node(i,&n);
if (store_put_node(s,&n)!=0){ ok("put_node", 0); free_node_fields(&n); store_close(s); return; }
free_node_fields(&n);
if ((i%500)==499) store_sync(s); /* checkpoint: dirty→clean so frames evictable */
}
for (int i=0;i<EDGE_COUNT;i++){
StoreEdge e; gen_edge(i,&e);
if (store_put_edge(s,&e)!=0){ ok("put_edge", 0); free_edge_fields(&e); store_close(s); return; }
free_edge_fields(&e);
if ((i%1000)==999) store_sync(s);
}
store_sync(s);
StorePoolStats st; store_pool_stats(s, &st);
printf(" pages=%llu pool: cap=%zu resident=%zu pinned=%zu dirty=%zu evictions=%llu\n",
(unsigned long long)store_page_count(s), st.cap, st.resident, st.pinned,
st.dirty, (unsigned long long)st.evictions);
ok("eviction actually fired (store exceeded the pool)", st.evictions > 0);
ok("pool stayed bounded (resident <= cap)", st.resident <= st.cap);
ok("no dirty frames after checkpoint", st.dirty == 0);
/* read back EVERY node bit-exact despite constant eviction/re-fault */
int bad = 0;
for (int i=0;i<NODE_COUNT;i++){
StoreNode want; gen_node(i,&want);
StoreNode got; int hit = store_get_node(s, want.id, &got);
if (hit!=1 || !cmp_node(&want,&got)) bad++;
if (hit==1) store_node_free(&got);
free_node_fields(&want);
}
ok("all 5000 nodes bit-exact under eviction", bad==0);
/* sample 4000 edges bit-exact */
int ebad = 0;
for (int i=0;i<EDGE_COUNT;i+=5){
StoreEdge want; gen_edge(i,&want);
StoreEdge got; int hit = store_get_edge(s, want.id, &got);
if (hit!=1 || !cmp_edge(&want,&got)) ebad++;
if (hit==1) store_edge_free(&got);
free_edge_fields(&want);
}
ok("sampled 4000 edges bit-exact under eviction", ebad==0);
ok("store_check crc clean under paging", store_check(s, STORE_CHECK_CRC)==0);
store_pool_stats(s, &st);
printf(" after reads: resident=%zu (<= cap=%zu) hits=%llu misses=%llu evictions=%llu\n",
st.resident, st.cap, (unsigned long long)st.hits,
(unsigned long long)st.misses, (unsigned long long)st.evictions);
ok("still bounded after full read-back", st.resident <= st.cap);
store_close(s);
unlink(path);
}
/* ════════════════════════════════════════════════════════════════════════════
* TEST 2 — EVICTION POLICY: a repeatedly-touched HOT set stays resident (0 extra
* faults) while a streaming COLD set is evicted; and a dirty-heavy write burst
* proves dirty pages are NEVER stolen before a checkpoint (no-steal).
* ════════════════════════════════════════════════════════════════════════════ */
static void test_eviction_policy(void){
printf("\n== 2) eviction policy: hot resident, cold evicted, no dirty stolen ==\n");
char path[600]; path_in(path, sizeof path, "evict.store");
unlink(path);
/* ---- part A: hot vs cold ---- */
EngramPagedStore* s = store_create(path);
if (!s){ ok("store_create", 0); return; }
const int N = 1500;
for (int i=0;i<N;i++){ StoreNode n; gen_node(i,&n); store_put_node(s,&n); free_node_fields(&n);
if ((i%400)==399) store_sync(s); }
store_sync(s);
store__set_pool_frames(s, 64);
const int HOT = 8;
/* warm the hot set */
for (int h=0;h<HOT;h++){ char id[32]; snprintf(id,sizeof id,"node-%d",h);
StoreNode g; if (store_get_node(s,id,&g)==1) store_node_free(&g); }
StorePoolStats a,b;
uint64_t hot_faults = 0, cold_faults = 0;
int cold = 200; /* streaming cold ids well outside hot set */
for (int r=0;r<150;r++){
for (int h=0;h<HOT;h++){
char id[32]; snprintf(id,sizeof id,"node-%d",h);
store_pool_stats(s,&a);
StoreNode g; if (store_get_node(s,id,&g)==1) store_node_free(&g);
store_pool_stats(s,&b);
hot_faults += (b.misses - a.misses);
}
for (int c=0;c<3;c++){
char id[32]; snprintf(id,sizeof id,"node-%d",cold++);
if (cold>=N) cold=200;
store_pool_stats(s,&a);
StoreNode g; if (store_get_node(s,id,&g)==1) store_node_free(&g);
store_pool_stats(s,&b);
cold_faults += (b.misses - a.misses);
}
}
printf(" hot re-get faults (post-warm)=%llu cold stream faults=%llu\n",
(unsigned long long)hot_faults, (unsigned long long)cold_faults);
ok("HOT pages stay resident (0 faults on re-access)", hot_faults == 0);
ok("COLD pages get evicted + re-faulted", cold_faults > 0);
store_pool_stats(s,&b);
double hr = (double)b.hits / (double)(b.hits + b.misses);
printf(" overall hit-rate = %.3f (hits=%llu misses=%llu)\n",
hr, (unsigned long long)b.hits, (unsigned long long)b.misses);
ok("hit-rate is sane (> 0.5)", hr > 0.5);
store_close(s);
unlink(path);
/* ---- part B: no-steal (dirty pages never evicted before checkpoint) ---- */
EngramPagedStore* s2 = store_create(path);
if (!s2){ ok("store_create(2)", 0); return; }
store__set_pool_frames(s2, 8); /* tiny budget */
for (int i=0;i<1200;i++){ StoreNode n; gen_node(i,&n); store_put_node(s2,&n); free_node_fields(&n); }
/* NO sync: every mutated page is dirty and, by no-steal, unevictable */
StorePoolStats d; store_pool_stats(s2,&d);
printf(" tiny cap=%zu, unsynced burst: resident=%zu dirty=%zu evictions=%llu\n",
d.cap, d.resident, d.dirty, (unsigned long long)d.evictions);
ok("dirty pages pinned in RAM beyond budget (no-steal)", d.dirty > d.cap && d.resident > d.cap);
/* a just-written node is served correctly from its dirty in-RAM page */
{ StoreNode want; gen_node(777,&want); StoreNode got; int hit=store_get_node(s2,want.id,&got);
ok("read served correctly from dirty (un-flushed) page", hit==1 && cmp_node(&want,&got));
if (hit==1) store_node_free(&got); free_node_fields(&want); }
store_sync(s2); /* checkpoint → dirty become clean/evictable */
store_pool_stats(s2,&d);
ok("checkpoint cleared all dirty frames", d.dirty == 0);
/* durability across reopen after the no-steal burst */
store_close(s2);
EngramPagedStore* s3 = store_open(path);
store__set_pool_frames(s3, 8);
int miss=0; for (int i=0;i<1200;i++){ StoreNode want; gen_node(i,&want);
StoreNode got; int hit=store_get_node(s3,want.id,&got);
if (hit!=1 || !cmp_node(&want,&got)) miss++;
if (hit==1) store_node_free(&got); free_node_fields(&want); }
ok("all 1200 survive reopen, bit-exact, tiny pool", miss==0);
store_close(s3);
unlink(path);
}
/* ════════════════════════════════════════════════════════════════════════════
* TEST 3 — PINNED RESIDENCY: superblocks + index roots never evicted under heavy
* thrash; an explicitly pinned page stays until unpinned; a pinned hot layer's
* pages stay resident and are released on unpin.
* ════════════════════════════════════════════════════════════════════════════ */
static void test_pinning(void){
printf("\n== 3) pinned residency: superblocks / index roots / page / layer ==\n");
char path[600]; path_in(path, sizeof path, "pin.store");
unlink(path);
EngramPagedStore* s = store_create(path);
if (!s){ ok("store_create", 0); return; }
const int N = 1500;
for (int i=0;i<N;i++){ StoreNode n; gen_node(i,&n); store_put_node(s,&n); free_node_fields(&n);
if ((i%400)==399) store_sync(s); }
store_sync(s);
store_close(s);
s = store_open(path); /* reopen: SBs + roots auto-pinned */
store__set_pool_frames(s, 24);
uint64_t P = store_page_count(s) / 2; /* an arbitrary interior page to pin */
store_pin_page(s, P);
/* thrash: stream a large cold working set to force heavy eviction */
for (int pass=0; pass<3; pass++)
for (int i=0;i<N;i++){ char id[32]; snprintf(id,sizeof id,"node-%d",i);
StoreNode g; if (store_get_node(s,id,&g)==1) store_node_free(&g); }
ok("superblock page 0 never evicted", store_pool_resident(s,0)==1);
ok("superblock mirror page 1 never evicted", store_pool_resident(s,1)==1);
ok("explicitly pinned page stayed resident under thrash", store_pool_resident(s,P)==1);
StorePoolStats st; store_pool_stats(s,&st);
printf(" after thrash: resident=%zu pinned=%zu evictions=%llu\n",
st.resident, st.pinned, (unsigned long long)st.evictions);
ok("structural + explicit pins counted (>=4: 2 SB + 2 roots)", st.pinned >= 4);
/* unpin the page → it becomes evictable and is dropped under further thrash */
store_unpin_page(s, P);
for (int i=0;i<N;i++){ char id[32]; snprintf(id,sizeof id,"node-%d",i);
StoreNode g; if (store_get_node(s,id,&g)==1) store_node_free(&g); }
ok("unpinned page becomes evictable (dropped)", store_pool_resident(s,P)==0);
/* hot-layer pin: layer 3 is used by ~1/5 of the nodes */
int npin = store_pin_layer(s, 3);
printf(" store_pin_layer(3) pinned %d page(s)\n", npin);
ok("pin_layer pinned a non-empty page set", npin > 0);
store_pool_stats(s,&st);
size_t pinned_with_layer = st.pinned;
for (int pass=0; pass<3; pass++)
for (int i=0;i<N;i++){ char id[32]; snprintf(id,sizeof id,"node-%d",i);
StoreNode g; if (store_get_node(s,id,&g)==1) store_node_free(&g); }
store_pool_stats(s,&st);
ok("hot-layer pages stay resident under thrash", st.pinned >= pinned_with_layer);
ok("layer pin holds >= npin extra frames", st.pinned >= (size_t)npin + 4);
store_unpin_layer(s, 3);
store_pool_stats(s,&st);
size_t after_unpin_max = st.pinned;
for (int i=0;i<N;i++){ char id[32]; snprintf(id,sizeof id,"node-%d",i);
StoreNode g; if (store_get_node(s,id,&g)==1) store_node_free(&g); }
store_pool_stats(s,&st);
printf(" pinned frames: with-layer=%zu after-unpin=%zu\n", pinned_with_layer, st.pinned);
ok("unpin_layer released the layer's pins", st.pinned < pinned_with_layer && after_unpin_max <= pinned_with_layer);
store_close(s);
unlink(path);
}
/* ════════════════════════════════════════════════════════════════════════════
* TEST 4 — PREFETCH: a sequential scan faults far fewer times with read-ahead on
* than off (each cold cache; identical store).
* ════════════════════════════════════════════════════════════════════════════ */
static void test_prefetch(void){
printf("\n== 4) prefetch: sequential scan faults fewer with read-ahead ==\n");
char path[600]; path_in(path, sizeof path, "prefetch.store");
unlink(path);
EngramPagedStore* s = store_create(path);
if (!s){ ok("store_create", 0); return; }
for (int i=0;i<2000;i++){ StoreNode n; gen_node(i,&n); store_put_node(s,&n); free_node_fields(&n);
if ((i%400)==399) store_sync(s); }
store_sync(s);
store_close(s);
/* prefetch OFF — cold cache */
EngramPagedStore* a = store_open(path);
store__set_pool_frames(a, 0); /* unlimited: isolate prefetch, no eviction */
store__set_prefetch(a, 0);
StorePoolStats o0, o1; store_pool_stats(a,&o0);
int na = store_scan_nodes(a, noop_node_cb, NULL); /* walk + fault every page */
(void)na;
store_pool_stats(a,&o1);
uint64_t faults_off = o1.misses - o0.misses;
store_close(a);
/* prefetch ON — cold cache (fresh open) */
EngramPagedStore* b = store_open(path);
store__set_pool_frames(b, 0);
store__set_prefetch(b, 16);
StorePoolStats p0, p1; store_pool_stats(b,&p0);
int nb = store_scan_nodes(b, noop_node_cb, NULL);
(void)nb;
store_pool_stats(b,&p1);
uint64_t faults_on = p1.misses - p0.misses;
uint64_t pref_reads = p1.prefetch_reads - p0.prefetch_reads;
store_close(b);
printf(" scan demand-faults: prefetch OFF=%llu ON=%llu (read-ahead brought in %llu pages)\n",
(unsigned long long)faults_off, (unsigned long long)faults_on,
(unsigned long long)pref_reads);
ok("prefetch reduced demand faults", faults_on < faults_off);
ok("read-ahead actually ran", pref_reads > 0);
unlink(path);
}
/* ════════════════════════════════════════════════════════════════════════════
* TEST 5 — CRASH SAFETY UNDER PAGING: WAL replay and checkpoint-crash recovery
* with a tiny pool (pages evict + re-fault during replay).
* ════════════════════════════════════════════════════════════════════════════ */
static void test_crash_under_paging(void){
printf("\n== 5) crash safety under a tiny pool (ENGRAM_POOL_FRAMES=16) ==\n");
setenv("ENGRAM_POOL_FRAMES", "16", 1); /* every engram_open() below is paged */
setenv("ENGRAM_WAL_SYNC", "always", 1);
/* ---- 5a: power-loss → WAL replay ---- */
char dir[600]; path_in(dir, sizeof dir, "crash_wal"); mkdir(dir, 0700);
EngramPagedStore* s = engram_open(dir);
if (!s){ ok("engram_open", 0); return; }
const int M = 400;
for (int i=0;i<M;i++){ StoreNode n; gen_node(i,&n); store_put_node(s,&n); free_node_fields(&n); }
store__crash(s); /* abandon RAM (dirty pages lost); WAL fsync'd */
s = engram_open(dir); /* replay WAL under 16-frame pool */
ok("reopened after crash (WAL replay, tiny pool)", s!=NULL);
int bad=0; for (int i=0;i<M;i++){ StoreNode want; gen_node(i,&want);
StoreNode got; int hit=store_get_node(s,want.id,&got);
if (hit!=1 || !cmp_node(&want,&got)) bad++;
if (hit==1) store_node_free(&got); free_node_fields(&want); }
ok("all 400 nodes recovered bit-exact via WAL replay under paging", bad==0);
ok("store_check crc clean post-recovery", store_check(s, STORE_CHECK_CRC)==0);
engram_close(s);
/* ---- 5b: checkpoint-crash at each phase ---- */
for (int phase=0; phase<=4; phase++){
char cdir[620]; snprintf(cdir, sizeof cdir, "%s/ck%d", g_dir, phase); mkdir(cdir,0700);
EngramPagedStore* c = engram_open(cdir);
for (int i=0;i<CK_NODES;i++){ StoreNode n; gen_node(i,&n); store_put_node(c,&n); free_node_fields(&n); }
store__checkpoint_crashat(c, phase); /* crash mid-checkpoint (frees c) */
EngramPagedStore* r = engram_open(cdir); /* heal + replay under tiny pool */
int miss=0; for (int i=0;i<CK_NODES;i++){ StoreNode want; gen_node(i,&want);
StoreNode got; int hit=store_get_node(r,want.id,&got);
if (hit!=1 || !cmp_node(&want,&got)) miss++;
if (hit==1) store_node_free(&got); free_node_fields(&want); }
char nm[64]; snprintf(nm,sizeof nm,"checkpoint-crash phase %d: all recovered (paged)", phase);
ok(nm, miss==0);
engram_close(r);
}
unsetenv("ENGRAM_POOL_FRAMES");
}
/* ════════════════════════════════════════════════════════════════════════════
* TEST 6 — DEFAULT POOL == PHASE 1: with the default (large) budget, no eviction
* ever fires; the whole store is resident, exactly the pre-M4 behaviour.
* ════════════════════════════════════════════════════════════════════════════ */
static void test_default_is_phase1(void){
printf("\n== 6) default (large) pool == Phase-1 resident (no eviction) ==\n");
char path[600]; path_in(path, sizeof path, "default.store");
unlink(path);
EngramPagedStore* s = store_create(path); /* default cap, no override */
if (!s){ ok("store_create", 0); return; }
for (int i=0;i<1500;i++){ StoreNode n; gen_node(i,&n); store_put_node(s,&n); free_node_fields(&n); }
store_sync(s);
for (int i=0;i<1500;i++){ char id[32]; snprintf(id,sizeof id,"node-%d",i);
StoreNode g; if (store_get_node(s,id,&g)==1) store_node_free(&g); }
StorePoolStats st; store_pool_stats(s,&st);
printf(" cap=%zu resident=%zu evictions=%llu (pages=%llu)\n",
st.cap, st.resident, (unsigned long long)st.evictions,
(unsigned long long)store_page_count(s));
ok("default budget is large", st.cap >= (size_t)(1u<<20));
ok("no eviction ever fired at default budget", st.evictions == 0);
ok("whole store resident (every page cached)", st.resident == store_page_count(s));
store_close(s);
unlink(path);
}
int main(void){
mk_dir();
printf("engram M4 buffer-pool gate — dir=%s\n", g_dir);
test_small_pool_roundtrip();
test_eviction_policy();
test_pinning();
test_prefetch();
test_crash_under_paging();
test_default_is_phase1();
printf("\n================ %d passed, %d failed ================\n", g_pass, g_fail);
return g_fail ? 1 : 0;
}
+421
View File
@@ -0,0 +1,421 @@
/* test_compaction.c — M5 gate: ONLINE COMPACTION + background checkpointer.
*
* Pure C. Build: gcc -O2 test_compaction.c ../../lang/runtime/engram_store.c -o t
* Writes ONLY under a throwaway /tmp dir. Never touches ~/.neuron or live ports.
*
* Proves:
* 1) RECLAIM — tombstone/forget a large fraction of nodes + re-put many edges
* (dead versions) + orphan large-record overflow chains, then compact:
* page count AND file size drop, yet EVERY live record survives bit-exact and
* the id + adjacency indexes resolve correctly at the relocated positions.
* 2) CRASH-DURING-COMPACTION — kill at phases 0/1/2; recovery is always a
* consistent store (crc clean, every live record intact), never corrupt.
* 3) BACKGROUND CHECKPOINTER — a low ops / WAL-bytes threshold fires a checkpoint
* automatically on the write path; the WAL prefix is reclaimed; recovery works.
* 4) POOL COOPERATION — compaction under a tiny ENGRAM_POOL_FRAMES stays correct
* with no stale frame surviving for a relocated page.
*/
#include "../../lang/runtime/engram_store.h"
#include <stdio.h>
#include <stdlib.h>
#include <string.h>
#include <stdint.h>
#include <unistd.h>
#include <fcntl.h>
#include <sys/stat.h>
static int g_pass = 0, g_fail = 0;
static void ok(const char* name, int cond){
printf(" [%s] %s\n", cond ? "PASS" : "FAIL", name);
if (cond) g_pass++; else g_fail++;
}
static char g_dir[512];
static int g_dseq = 0;
static void mk_dir(void){
snprintf(g_dir, sizeof g_dir, "/tmp/engram-compact-test-%d-%d", (int)getpid(), g_dseq++);
mkdir(g_dir, 0700);
}
static void egm_path(char* out, size_t cap){ snprintf(out, cap, "%s/neuron.egm", g_dir); }
static void wal_path(char* out, size_t cap){ snprintf(out, cap, "%s/neuron.wal", g_dir); }
static long file_size(const char* p){ struct stat st; return stat(p,&st)==0 ? (long)st.st_size : -1; }
/* ── deterministic generators (bit-exact regeneration for oracles) ─────────── */
static uint64_t xs(uint64_t* s){ uint64_t x=*s; x^=x<<13; x^=x>>7; x^=x<<17; *s=x; return x; }
static uint64_t node_seed(int i){ return 0x9E3779B97F4A7C15ULL ^ ((uint64_t)(i+1)*0xD1B54A32D192ED03ULL); }
static uint64_t edge_seed(int i){ return 0xC2B2AE3D27D4EB4FULL ^ ((uint64_t)(i+1)*0x165667B19E3779F9ULL); }
static char* rnd_str(uint64_t* st, size_t len){
char* s = (char*)malloc(len + 1);
for (size_t i=0;i<len;i++) s[i] = (char)(33 + (xs(st) % 94));
s[len] = 0; return s;
}
#define N_NODES 1500
#define N_DEAD 1200 /* forget node-0 .. node-1199 (1200 dead / 300 live) */
#define N_EDGES 3000
#define EDGE_REPUT 2000 /* re-put edge-0 .. edge-1999 to version 3 */
#define EMB_DIM 96
static int node_is_live(int i){ return i >= N_DEAD; }
static int edge_live_version(int i){ return (i < EDGE_REPUT) ? 3 : 0; }
static void gen_node(int i, StoreNode* n){
memset(n, 0, sizeof *n);
uint64_t st = node_seed(i);
char id[32]; snprintf(id, sizeof id, "node-%d", i);
n->id = strdup(id);
/* every 7th record is large → its own overflow chain (orphaned when it dies) */
size_t clen = (i % 7 == 0) ? (size_t)(18000 + (xs(&st) % 4000)) : (size_t)(xs(&st) % 200);
n->content = rnd_str(&st, clen);
n->node_type = rnd_str(&st, 4 + (xs(&st) % 8));
n->label = (i % 2) ? rnd_str(&st, 3 + (xs(&st) % 10)) : NULL;
n->tier = rnd_str(&st, 4 + (xs(&st) % 6));
n->tags = rnd_str(&st, xs(&st) % 40);
n->metadata = (i % 3) ? rnd_str(&st, xs(&st) % 60) : NULL;
n->salience = (double)(xs(&st) % 1000000) / 997.0;
n->importance = (double)(xs(&st) % 1000000) / 131.0;
n->confidence = (double)(xs(&st) % 1000000) / 733.0;
n->temporal_decay_rate = (double)(xs(&st) % 1000000) / 101.0;
n->activation_count = (int64_t)(xs(&st) % 100000);
n->last_activated = (int64_t)xs(&st);
n->created_at = (int64_t)(1600000000000LL + i);
n->updated_at = (int64_t)xs(&st);
n->background_activation = (double)(xs(&st) % 1000000) / 17.0;
n->working_memory_weight = (double)(xs(&st) % 1000000) / 29.0;
n->suppression_count = (int32_t)(xs(&st) % 50);
n->layer_id = (uint32_t)(xs(&st) % 5);
for (int k=0;k<STORE_BLL_K;k++) n->access_ts[k] = (int64_t)xs(&st);
n->access_head = (int32_t)(xs(&st) % STORE_BLL_K);
n->access_filled = (int32_t)(xs(&st) % (STORE_BLL_K + 1));
n->wm_anchor = (double)(xs(&st) % 1000000) / 3.0;
n->emb = (float*)malloc(EMB_DIM * sizeof(float));
for (int k=0;k<EMB_DIM;k++){ uint32_t u=(uint32_t)xs(&st); memcpy(&n->emb[k], &u, 4); }
n->emb_dim = EMB_DIM;
}
/* version alters weight/hebb/last_fired so a re-put is a distinct payload. */
static void gen_edge(int i, int version, StoreEdge* e){
memset(e, 0, sizeof *e);
uint64_t st = edge_seed(i);
char id[32], from[32], to[32];
snprintf(id, sizeof id, "edge-%d", i);
/* connect live nodes so adjacency queries on live nodes are meaningful */
snprintf(from, sizeof from, "node-%d", N_DEAD + (int)(xs(&st) % (N_NODES - N_DEAD)));
snprintf(to, sizeof to, "node-%d", N_DEAD + (int)(xs(&st) % (N_NODES - N_DEAD)));
e->id = strdup(id); e->from_id = strdup(from); e->to_id = strdup(to);
e->relation = rnd_str(&st, 3 + (xs(&st) % 12));
e->metadata = (i % 4) ? rnd_str(&st, xs(&st) % 40) : NULL;
e->weight = (double)(xs(&st) % 1000000) / 7.0 + version * 100.0;
e->hebb = (double)(xs(&st) % 1000000) / 13.0 + version * 3.0;
e->confidence = (double)(xs(&st) % 1000000) / 5.0;
e->created_at = (int64_t)(1600000000000LL + i);
e->updated_at = (int64_t)xs(&st) + version;
e->last_fired = (int64_t)xs(&st) + version * 1000;
e->inhibitory = (int32_t)(xs(&st) % 2);
e->layer_id = (uint32_t)(xs(&st) % 5);
}
static int streq(const char* a, const char* b){
if (!a && !b) return 1; if (!a || !b) return 0; return strcmp(a,b)==0;
}
static int cmp_node(const StoreNode* a, const StoreNode* b){
if (!streq(a->id,b->id) || !streq(a->content,b->content) ||
!streq(a->node_type,b->node_type) || !streq(a->label,b->label) ||
!streq(a->tier,b->tier) || !streq(a->tags,b->tags) ||
!streq(a->metadata,b->metadata)) return 0;
if (a->salience!=b->salience || a->importance!=b->importance ||
a->confidence!=b->confidence || a->temporal_decay_rate!=b->temporal_decay_rate ||
a->activation_count!=b->activation_count || a->last_activated!=b->last_activated ||
a->created_at!=b->created_at || a->updated_at!=b->updated_at ||
a->background_activation!=b->background_activation ||
a->working_memory_weight!=b->working_memory_weight ||
a->suppression_count!=b->suppression_count || a->layer_id!=b->layer_id ||
a->access_head!=b->access_head || a->access_filled!=b->access_filled ||
a->wm_anchor!=b->wm_anchor || a->emb_dim!=b->emb_dim) return 0;
for (int k=0;k<STORE_BLL_K;k++) if (a->access_ts[k]!=b->access_ts[k]) return 0;
if ((a->emb==NULL) != (b->emb==NULL)) return 0;
if (a->emb && memcmp(a->emb, b->emb, (size_t)a->emb_dim*4)!=0) return 0;
return 1;
}
static int cmp_edge(const StoreEdge* a, const StoreEdge* b){
if (!streq(a->id,b->id) || !streq(a->from_id,b->from_id) || !streq(a->to_id,b->to_id) ||
!streq(a->relation,b->relation) || !streq(a->metadata,b->metadata)) return 0;
if (a->weight!=b->weight || a->hebb!=b->hebb || a->confidence!=b->confidence ||
a->created_at!=b->created_at || a->updated_at!=b->updated_at ||
a->last_fired!=b->last_fired || a->inhibitory!=b->inhibitory ||
a->layer_id!=b->layer_id) return 0;
return 1;
}
/* Populate a durable store with dead space: all nodes/edges, then forget the first
* N_DEAD nodes and re-put the first EDGE_REPUT edges three times. */
static void populate_with_dead_space(EngramPagedStore* s){
for (int i=0;i<N_NODES;i++){ StoreNode n; gen_node(i,&n); store_put_node(s,&n); store_node_free(&n); }
for (int i=0;i<N_EDGES;i++){ StoreEdge e; gen_edge(i,0,&e); store_put_edge(s,&e); store_edge_free(&e); }
/* re-put (in-place field mutation) → prior versions become dead records */
for (int v=1; v<=3; v++)
for (int i=0;i<EDGE_REPUT;i++){ StoreEdge e; gen_edge(i,v,&e); store_put_edge(s,&e); store_edge_free(&e); }
/* forget the cold nodes (tombstone; their large overflow chains orphan) */
for (int i=0;i<N_DEAD;i++){ char id[32]; snprintf(id,sizeof id,"node-%d",i); store_forget(s,id); }
}
/* Assert every live node/edge is present + bit-exact via point reads. */
static int verify_live_set(EngramPagedStore* s){
int bad = 0;
for (int i=0;i<N_NODES;i++){
char id[32]; snprintf(id,sizeof id,"node-%d",i);
StoreNode got; int hit = store_get_node(s, id, &got);
if (node_is_live(i)){
StoreNode want; gen_node(i,&want);
if (hit!=1 || !cmp_node(&want,&got)) bad++;
if (hit==1) store_node_free(&got);
store_node_free(&want);
} else {
if (hit!=0) bad++; /* forgotten → must be absent */
if (hit==1) store_node_free(&got);
}
}
for (int i=0;i<N_EDGES;i++){
char id[32]; snprintf(id,sizeof id,"edge-%d",i);
StoreEdge got; int hit = store_get_edge(s, id, &got);
StoreEdge want; gen_edge(i, edge_live_version(i), &want);
if (hit!=1 || !cmp_edge(&want,&got)) bad++;
if (hit==1) store_edge_free(&got);
store_edge_free(&want);
}
return bad;
}
/* ════════════════════════════════════════════════════════════════════════════
* TEST 1 — RECLAIM: dead space is reclaimed; live records + indexes survive.
* ════════════════════════════════════════════════════════════════════════════ */
static void test_reclaim(void){
printf("\n== 1) reclaim: forget %d nodes + re-put %d edges x3, then compact ==\n",
N_DEAD, EDGE_REPUT);
mk_dir();
char egm[600]; egm_path(egm, sizeof egm);
EngramPagedStore* s = engram_open(g_dir);
ok("engram_open", s != NULL);
if (!s) return;
populate_with_dead_space(s);
engram_checkpoint(s); /* flush so file size reflects state */
uint64_t pc_before = store_page_count(s);
uint64_t free_before = store_free_page_count(s);
long sz_before = file_size(egm);
printf(" BEFORE: page_count=%llu free_pages=%llu file=%ld bytes (live records intact?)\n",
(unsigned long long)pc_before, (unsigned long long)free_before, sz_before);
ok("pre-compaction live set intact", verify_live_set(s)==0);
/* capture adjacency for a sample of live from-ids to compare post-compaction */
#define NSAMP 12
char samp[NSAMP][32]; size_t pre_cnt[NSAMP];
for (int k=0;k<NSAMP;k++){
snprintf(samp[k], sizeof samp[k], "node-%d", N_DEAD + k*20);
StoreEdge* arr=NULL; size_t cnt=0;
store_get_edges_from(s, samp[k], &arr, &cnt);
pre_cnt[k]=cnt; store_edges_free(arr,cnt);
}
int rc = store_compact(s);
ok("store_compact returns 0", rc==0);
uint64_t pc_after = store_page_count(s);
uint64_t free_after = store_free_page_count(s);
long sz_after = file_size(egm);
printf(" AFTER : page_count=%llu free_pages=%llu file=%ld bytes\n",
(unsigned long long)pc_after, (unsigned long long)free_after, sz_after);
printf(" RECLAIMED: %llu pages, %ld bytes (%.1f%% of file)\n",
(unsigned long long)(pc_before - pc_after), sz_before - sz_after,
sz_before ? 100.0*(sz_before-sz_after)/sz_before : 0.0);
ok("page count dropped (dead pages reclaimed)", pc_after < pc_before);
ok("file size dropped (store physically shrank)", sz_after < sz_before);
ok("store_check crc clean after compaction", store_check(s, STORE_CHECK_CRC)==0);
ok("every LIVE record present + bit-exact at new locations", verify_live_set(s)==0);
/* adjacency index correct at relocated positions */
int adj_bad = 0;
for (int k=0;k<NSAMP;k++){
StoreEdge* arr=NULL; size_t cnt=0;
store_get_edges_from(s, samp[k], &arr, &cnt);
if (cnt != pre_cnt[k]) adj_bad++;
for (size_t j=0;j<cnt;j++){
if (!streq(arr[j].from_id, samp[k])) { adj_bad++; break; }
/* the returned edge must be the canonical latest live edge, bit-exact */
int idx = atoi(arr[j].id + 5);
StoreEdge want; gen_edge(idx, edge_live_version(idx), &want);
if (!cmp_edge(&want,&arr[j])) adj_bad++;
store_edge_free(&want);
}
store_edges_free(arr,cnt);
}
ok("adjacency (get_edges_from) correct + bit-exact post-compaction", adj_bad==0);
/* second compaction is a near no-op (no new dead space) and stays correct */
uint64_t pc2_before = store_page_count(s);
ok("compact again returns 0", store_compact(s)==0);
ok("idempotent-ish: no growth on re-compact", store_page_count(s) <= pc2_before);
ok("live set still intact after 2nd compaction", verify_live_set(s)==0);
engram_close(s);
}
/* ════════════════════════════════════════════════════════════════════════════
* TEST 2 — CRASH DURING COMPACTION: kill at phases 0/1/2 → consistent recovery.
* Live set is identical whether we recover pre- or post-compaction, so the same
* oracle must hold, and crc must always be clean (never corrupt).
* ════════════════════════════════════════════════════════════════════════════ */
static void test_crash_during_compaction(void){
printf("\n== 2) crash during compaction at phases 0,1,2 → consistent store ==\n");
for (int phase=0; phase<=2; phase++){
mk_dir();
char egm[600]; egm_path(egm, sizeof egm);
EngramPagedStore* s = engram_open(g_dir);
if (!s){ ok("engram_open", 0); continue; }
populate_with_dead_space(s);
engram_close(s); /* durable baseline on disk */
uint64_t pc_pre = 0;
{ EngramPagedStore* p = engram_open(g_dir); pc_pre = store_page_count(p); engram_close(p); }
EngramPagedStore* c = engram_open(g_dir);
store__compact_crashat(c, phase); /* crashes mid-compaction (frees c) */
EngramPagedStore* r = engram_open(g_dir); /* recover */
char nm[80];
snprintf(nm, sizeof nm, "phase %d: recovers, crc clean", phase);
ok(nm, r && store_check(r, STORE_CHECK_CRC)==0);
snprintf(nm, sizeof nm, "phase %d: every live record intact (not corrupt)", phase);
ok(nm, r && verify_live_set(r)==0);
if (r){
uint64_t pc_now = store_page_count(r);
if (phase < 2){
snprintf(nm, sizeof nm, "phase %d: recovered PRE-compaction image", phase);
ok(nm, pc_now == pc_pre);
} else {
snprintf(nm, sizeof nm, "phase %d: recovered POST-compaction (shrunk)", phase);
ok(nm, pc_now < pc_pre);
}
/* store stays writable + durable after recovery */
StoreNode n; gen_node(N_NODES+phase, &n); free(n.id);
n.id = strdup("post-recovery-node");
store_put_node(r, &n); store_node_free(&n);
StoreNode g; int hit = store_get_node(r, "post-recovery-node", &g);
snprintf(nm, sizeof nm, "phase %d: store writable after recovery", phase);
ok(nm, hit==1);
if (hit==1) store_node_free(&g);
engram_close(r);
}
}
}
/* ════════════════════════════════════════════════════════════════════════════
* TEST 3 — BACKGROUND CHECKPOINTER: a low threshold fires checkpoints on the
* write path, reclaiming the WAL prefix automatically; recovery still correct.
* ════════════════════════════════════════════════════════════════════════════ */
static void test_background_checkpointer(void){
printf("\n== 3) background checkpointer: auto-checkpoint on threshold ==\n");
/* (a) ops trigger */
{
mk_dir();
char wal[600]; wal_path(wal, sizeof wal);
EngramPagedStore* s = engram_open(g_dir);
if (!s){ ok("engram_open", 0); return; }
store_set_checkpoint_policy(s, /*ops*/50, /*dirty*/0, /*wal_bytes*/0, /*ms*/0);
uint64_t ckpt0 = engram_last_checkpoint_lsn(s);
for (int i=0;i<600;i++){ StoreNode n; gen_node(i,&n); store_put_node(s,&n); store_node_free(&n); }
uint64_t ckpt1 = engram_last_checkpoint_lsn(s);
long wsz = file_size(wal);
printf(" ops-trigger: ckpt_lsn %llu -> %llu, WAL=%ld bytes after 600 puts\n",
(unsigned long long)ckpt0, (unsigned long long)ckpt1, wsz);
ok("ops trigger fired an automatic checkpoint", ckpt1 > ckpt0);
ok("WAL prefix reclaimed (WAL stays small)", wsz >= 0 && wsz < 200000);
/* crash (abandon RAM) then recover — everything durable via WAL+checkpoint */
store__crash(s);
EngramPagedStore* r = engram_open(g_dir);
int bad=0;
for (int i=0;i<600;i++){ char id[32]; snprintf(id,sizeof id,"node-%d",i);
StoreNode w; gen_node(i,&w); StoreNode g; int hit=store_get_node(r,id,&g);
if (hit!=1 || !cmp_node(&w,&g)) bad++; if(hit==1) store_node_free(&g); store_node_free(&w); }
ok("recovery correct after auto-checkpoints (ops)", r && bad==0);
ok("crc clean after recovery (ops)", r && store_check(r,STORE_CHECK_CRC)==0);
if (r) engram_close(r);
}
/* (b) WAL-bytes trigger */
{
mk_dir();
char wal[600]; wal_path(wal, sizeof wal);
EngramPagedStore* s = engram_open(g_dir);
if (!s){ ok("engram_open", 0); return; }
store_set_checkpoint_policy(s, /*ops*/0, /*dirty*/0, /*wal_bytes*/64*1024, /*ms*/0);
uint64_t ckpt0 = engram_last_checkpoint_lsn(s);
for (int i=0;i<600;i++){ StoreNode n; gen_node(i,&n); store_put_node(s,&n); store_node_free(&n); }
uint64_t ckpt1 = engram_last_checkpoint_lsn(s);
long wsz = file_size(wal);
printf(" wal-bytes-trigger: ckpt_lsn %llu -> %llu, WAL=%ld bytes\n",
(unsigned long long)ckpt0, (unsigned long long)ckpt1, wsz);
ok("wal-bytes trigger fired an automatic checkpoint", ckpt1 > ckpt0);
ok("WAL kept bounded by byte threshold", wsz >= 0 && wsz < 2*1024*1024);
engram_close(s);
}
/* (c) dirty-frames trigger (under a bounded pool) */
{
mk_dir();
EngramPagedStore* s = engram_open(g_dir);
if (!s){ ok("engram_open", 0); return; }
store_set_checkpoint_policy(s, /*ops*/0, /*dirty*/16, /*wal_bytes*/0, /*ms*/0);
uint64_t ckpt0 = engram_last_checkpoint_lsn(s);
for (int i=0;i<400;i++){ StoreNode n; gen_node(i,&n); store_put_node(s,&n); store_node_free(&n); }
uint64_t ckpt1 = engram_last_checkpoint_lsn(s);
ok("dirty-frames trigger fired an automatic checkpoint", ckpt1 > ckpt0);
engram_close(s);
}
}
/* ════════════════════════════════════════════════════════════════════════════
* TEST 4 — POOL COOPERATION: compact under a tiny frame budget (constant eviction
* + re-fault); correctness holds and no stale frame survives a relocated page.
* ════════════════════════════════════════════════════════════════════════════ */
static void test_pool_cooperation(void){
printf("\n== 4) compaction under a small buffer pool (forced eviction) ==\n");
setenv("ENGRAM_POOL_FRAMES", "24", 1); /* pool << store, and the temp build too */
mk_dir();
char egm[600]; egm_path(egm, sizeof egm);
EngramPagedStore* s = engram_open(g_dir);
ok("engram_open (24-frame pool)", s != NULL);
if (!s){ unsetenv("ENGRAM_POOL_FRAMES"); return; }
store__set_pool_frames(s, 24);
populate_with_dead_space(s);
engram_checkpoint(s);
uint64_t pc_before = store_page_count(s);
int rc = store_compact(s);
ok("store_compact under tiny pool returns 0", rc==0);
StorePoolStats st; store_pool_stats(s, &st);
printf(" post-compaction pool: cap=%zu resident=%zu pinned=%zu dirty=%zu\n",
st.cap, st.resident, st.pinned, st.dirty);
ok("pool respected budget after compaction (resident<=cap)", st.resident <= st.cap);
ok("page count dropped under small pool", store_page_count(s) < pc_before);
ok("crc clean under small pool", store_check(s, STORE_CHECK_CRC)==0);
/* If any relocated page had a stale frame, a read would return wrong bytes. */
ok("every live record bit-exact under small pool (no stale frames)", verify_live_set(s)==0);
engram_close(s);
unsetenv("ENGRAM_POOL_FRAMES");
}
int main(void){
printf("=== M5 COMPACTION + BACKGROUND CHECKPOINTER GATE ===\n");
test_reclaim();
test_crash_during_compaction();
test_background_checkpointer();
test_pool_cooperation();
printf("\n=== RESULT: %d passed, %d failed ===\n", g_pass, g_fail);
/* cleanup */
return g_fail ? 1 : 0;
}
+159
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/* test_geometry.c — build + RUN gate for the M9 FOUNDATION geometry descriptor
* (engram_geometry.{c,h}). Self-contained: synthesizes a store with two KNOWN
* embedding clusters + intra-cluster hebb edges, then verifies the descriptor
* recovers the shape — centroid near the seeded cluster, skeleton = the strong
* intra-cluster edges, membership gradient, radius, positive co-registration.
*
* Pure C11; links engram_geometry.c + engram_store.c + engram_vindex.c; -lm.
* ASan/UBSan clean. Needs no live data.
*/
#include "engram_geometry.h"
#include "engram_store.h"
#include "engram_vindex.h"
#include <stdio.h>
#include <stdlib.h>
#include <string.h>
#include <math.h>
#include <stdint.h>
#include <unistd.h>
#define DIM 64
static int g_fail=0;
#define CHECK(c,m) do{ if(!(c)){printf(" FAIL: %s\n",m); g_fail=1;} else printf(" ok: %s\n",m);}while(0)
static uint64_t rs=0x1234abcdULL;
static uint64_t xr(void){ uint64_t z=(rs+=0x9E3779B97F4A7C15ULL);
z=(z^(z>>30))*0xBF58476D1CE4E5B9ULL; z=(z^(z>>27))*0x94D049BB133111EBULL; return z^(z>>31); }
static float jitter(void){ return (float)(((double)(xr()>>11)*(1.0/9007199254740992.0))-0.5)*0.15f; }
/* two clusters: A centered on axis 0, B centered on axis 1. NA+NB nodes. */
#define NA 40
#define NB 40
int main(void){
printf("=== engram_geometry (M9 foundation) test suite ===\n");
char path[256]; snprintf(path,sizeof path,"/tmp/geo_test_store_%d.egm",(int)getpid());
unlink(path);
EngramPagedStore* st=store_create(path);
if(!st){ printf("FAIL: store_create\n"); return 1; }
char aids[NA][16], bids[NB][16];
/* cluster A: near +e0 ; cluster B: near +e1 */
for(int i=0;i<NA;i++){
StoreNode n; memset(&n,0,sizeof n);
snprintf(aids[i],16,"A%d",i); n.id=aids[i]; n.node_type="Concept"; n.tier="Semantic";
n.content="cluster-A"; n.salience=0.5+0.01*i;
float v[DIM]; for(int d=0;d<DIM;d++) v[d]=jitter(); v[0]=1.0f+jitter();
n.emb=v; n.emb_dim=DIM; store_put_node(st,&n);
}
for(int i=0;i<NB;i++){
StoreNode n; memset(&n,0,sizeof n);
snprintf(bids[i],16,"B%d",i); n.id=bids[i]; n.node_type="Concept"; n.tier="Semantic";
n.content="cluster-B"; n.salience=0.3;
float v[DIM]; for(int d=0;d<DIM;d++) v[d]=jitter(); v[1]=1.0f+jitter();
n.emb=v; n.emb_dim=DIM; store_put_node(st,&n);
}
/* strong intra-A hebb edges (a chain + hub), weaker cross edges A0<->B0 */
int ei=0;
for(int i=1;i<NA;i++){
StoreEdge e; memset(&e,0,sizeof e); char id[24]; snprintf(id,24,"eA%d",ei++);
e.id=id; e.from_id=aids[0]; e.to_id=aids[i]; e.relation="assoc"; e.weight=0.9; e.hebb=0.4;
store_put_edge(st,&e);
}
for(int i=1;i<NB;i++){
StoreEdge e; memset(&e,0,sizeof e); char id[24]; snprintf(id,24,"eB%d",ei++);
e.id=id; e.from_id=bids[0]; e.to_id=bids[i]; e.relation="assoc"; e.weight=0.9; e.hebb=0.4;
store_put_edge(st,&e);
}
{ StoreEdge e; memset(&e,0,sizeof e); e.id=(char*)"eX"; e.from_id=aids[0]; e.to_id=bids[0];
e.relation="assoc"; e.weight=0.5; e.hebb=0.0; store_put_edge(st,&e); }
store_close(st);
VIndex* ix=vindex_create(DIM,0,0);
char** ids=NULL; int nids=0;
int ins=vindex_build_from_store(ix, path, &ids, &nids);
CHECK(ins==NA+NB, "vindex built over all embedded nodes");
GeoParams P; engram_geo_default_params(&P); P.ann_k=20; P.max_members=0;
/* seed inside cluster A -> expect an A-dominated neighborhood */
st=store_open(path);
/* global-mean cache over the embedded set: the centering offset */
GeoMeanCache* mc=engram_geo_mean_build(st);
const float* gm=engram_geo_mean_vec(mc);
CHECK(mc!=NULL && engram_geo_mean_dim(mc)==DIM, "global-mean cache built over embedded set");
CHECK(engram_geo_mean_count(mc)==(uint64_t)(NA+NB), "global mean averaged all embedded nodes");
const char* seeds[1]={aids[0]};
/* CENTERED descriptor: pass the global mean so geometry runs in isotropic space */
GeoDescriptor* g=engram_geometry_descriptor(st, ix, ids, nids, seeds, 1, &P, gm);
CHECK(g!=NULL, "descriptor computed");
if(g){
printf(" members=%d embedded=%d edges=%d k_core=%d radius=%.4f co_reg=%.3f n_axes=%d\n",
g->n_members,g->n_embedded,g->n_edges,g->k_core,g->radius,g->co_registration,g->n_axes);
/* geometry ran in CENTERED space: g->centroid is the centered centroid,
* g->global_mean the applied offset. Reconstruct the raw prototype
* (centroid + global_mean) and check it sits on cluster-A's axis. */
CHECK(g->global_mean!=NULL, "descriptor recorded the centering offset (centered mode)");
int argmax=0; float best=-1.f;
for(int d=0;d<g->dim;d++){ float raw=g->centroid[d]+(g->global_mean?g->global_mean[d]:0.f);
if(fabsf(raw)>best){ best=fabsf(raw); argmax=d; } }
printf(" raw-prototype dominant axis = %d (expect 0); centered c[0]=%.3f c[1]=%.3f\n",
argmax, g->centroid[0], g->centroid[1]);
CHECK(argmax==0, "raw prototype sits on cluster-A's axis (near members)");
/* centering pushes A off cluster-B's axis: centered c[0] > c[1] */
CHECK(g->centroid[0] > g->centroid[1], "centered centroid leans off B's axis (isotropy)");
/* hub should be A0 (the intra-A hub with NA-1 strong edges) */
CHECK(g->hub_id && strcmp(g->hub_id,"A0")==0, "hub = the relational center A0");
/* membership: seed A0 == 1.0; A-members strong, B-members (if any) weaker */
double seedw=-1, minA=2, maxB=-1; int na=0,nb=0;
for(int i=0;i<g->n_members;i++){
const char* id=g->members[i].id; double w=g->members[i].membership;
if(strcmp(id,"A0")==0) seedw=w;
if(id[0]=='A'){ na++; if(w<minA)minA=w; }
if(id[0]=='B'){ nb++; if(w>maxB)maxB=w; }
}
printf(" A-members=%d B-members=%d seedw=%.3f\n", na,nb,seedw);
CHECK(fabs(seedw-1.0)<1e-9, "seed membership == 1.0");
CHECK(na>=NA-1, "neighborhood recovers cluster A");
/* skeleton = the strong intra-A edges: every edge eff_weight>=threshold,
* and edges connect A-nodes (co-registration should be positive: wired
* pairs are semantically near). */
int allstrong=1, allA=1;
for(int e=0;e<g->n_edges;e++){
if(g->edges[e].eff_weight < P.edge_min_weight) allstrong=0;
const char* a=g->members[g->edges[e].a].id, *b=g->members[g->edges[e].b].id;
if(!(a[0]=='A'&&b[0]=='A')) { /* the lone eX cross edge is allowed */
if(!((strcmp(a,"A0")==0&&strcmp(b,"B0")==0)||(strcmp(a,"B0")==0&&strcmp(b,"A0")==0))) allA=0; }
}
CHECK(allstrong, "skeleton holds only above-threshold (strong) edges");
CHECK(allA, "skeleton backbone is the intra-cluster wiring");
CHECK(g->co_registration>0.0, "co-registration positive (wired pairs are semantically near)");
/* principal axes: extents strictly non-increasing */
int mono=1; for(int i=1;i<g->n_axes;i++) if(g->axes[i].extent>g->axes[i-1].extent+1e-9) mono=0;
CHECK(g->n_axes>0 && mono, "principal axes sorted by descending extent");
CHECK(g->radius>0, "radius positive");
}
engram_geo_free(g);
/* edge cases: NULL store, no seeds, relational-only (NULL vindex) */
CHECK(engram_geometry_descriptor(NULL,ix,ids,nids,seeds,1,&P,gm)==NULL, "NULL store -> NULL");
CHECK(engram_geometry_descriptor(st,ix,ids,nids,seeds,0,&P,gm)==NULL, "zero seeds -> NULL");
GeoDescriptor* g2=engram_geometry_descriptor(st, NULL, NULL, 0, seeds, 1, &P, gm);
CHECK(g2!=NULL && g2->n_members>=NA-1, "relational-only path (no vindex) works");
engram_geo_free(g2);
/* raw (uncentered) mode still supported: global_mean=NULL -> no offset recorded */
GeoDescriptor* g3=engram_geometry_descriptor(st, ix, ids, nids, seeds, 1, &P, NULL);
CHECK(g3!=NULL && g3->global_mean==NULL, "raw mode (global_mean=NULL) leaves offset unset");
engram_geo_free(g3);
engram_geo_mean_free(mc);
for(int i=0;i<nids;i++) free(ids[i]); free(ids);
vindex_free(ix); store_close(st); unlink(path);
printf("\n=== %s ===\n", g_fail?"FAILURES PRESENT":"ALL TESTS PASSED");
return g_fail;
}
+79
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/* test_interoception_p0_emb.c — M-INTEROCEPTION Priority 0.
*
* Verifies the new READ-ONLY builtin engram_scan_nodes_emb_json(limit,offset):
* - every emitted node carries emb_dim and an emb JSON array of that length,
* - nodes without an embedding emit emb_dim:0 / emb:[],
* - pagination (limit/offset) is honoured,
* - the count matches engram_node_count,
* - the EXISTING engram_scan_nodes_json path is byte-unchanged (no emb field),
* i.e. the addition is purely additive / behavior-neutral.
*
* Pure-C harness (no elc). We craft a snapshot with real emb vectors, load it
* (engram_load parses "emb" comma-lists into node->emb via eg_parse_emb), then
* dump via both scan paths. Assertions live in run_interoception_p0.sh.
*/
#include "el_runtime.h"
#include <stdio.h>
#include <stdlib.h>
#include <string.h>
static el_val_t S(const char* s){ return EL_STR(s); }
/* 16-d embedding as a comma list (>=8 required by eg_parse_emb). */
static void emb_list(char* out, size_t cap, int dim, double base){
size_t o = 0;
for (int i = 0; i < dim; i++){
o += snprintf(out+o, cap-o, "%s%.4f", i?",":"", base + 0.01*i);
}
}
int main(int argc, char** argv){
if (argc < 2){ fprintf(stderr, "usage: %s <dir>\n", argv[0]); return 2; }
const char* dir = argv[1];
char snap[1024]; snprintf(snap, sizeof snap, "%s/seed.json", dir);
char e1[512], e2[512];
emb_list(e1, sizeof e1, 16, 0.10);
emb_list(e2, sizeof e2, 16, 0.50);
/* Two embedded nodes (distinct salience → deterministic sort order) and one
* un-embedded node. */
FILE* f = fopen(snap, "w");
if (!f){ perror("fopen"); return 2; }
fprintf(f,
"{\"nodes\":["
"{\"id\":\"n-high\",\"content\":\"high salience embedded\",\"node_type\":\"Concept\","
"\"label\":\"emb-high\",\"tier\":\"Semantic\",\"salience\":0.9,\"importance\":0.8,"
"\"confidence\":1.0,\"created_at\":1000,\"emb\":\"%s\"},"
"{\"id\":\"n-mid\",\"content\":\"mid salience embedded\",\"node_type\":\"Concept\","
"\"label\":\"emb-mid\",\"tier\":\"Semantic\",\"salience\":0.5,\"importance\":0.5,"
"\"confidence\":1.0,\"created_at\":2000,\"emb\":\"%s\"},"
"{\"id\":\"n-low\",\"content\":\"low salience no embedding\",\"node_type\":\"Fact\","
"\"label\":\"noemb-low\",\"tier\":\"Semantic\",\"salience\":0.1,\"importance\":0.2,"
"\"confidence\":1.0,\"created_at\":3000}"
"],\"edges\":[]}", e1, e2);
fclose(f);
if (!engram_load(S(snap))){ fprintf(stderr, "load failed\n"); return 2; }
long long nc = (long long)(int64_t)engram_node_count();
printf("node_count=%lld\n", nc);
/* full page */
el_val_t all = engram_scan_nodes_emb_json((el_val_t)256, (el_val_t)0);
char p[1024];
snprintf(p, sizeof p, "%s/emb_all.json", dir);
f = fopen(p, "w"); fputs(EL_CSTR(all), f); fclose(f);
/* pagination: one node at offset 0 and one at offset 1 */
el_val_t pg0 = engram_scan_nodes_emb_json((el_val_t)1, (el_val_t)0);
el_val_t pg1 = engram_scan_nodes_emb_json((el_val_t)1, (el_val_t)1);
snprintf(p, sizeof p, "%s/emb_pg0.json", dir); f = fopen(p, "w"); fputs(EL_CSTR(pg0), f); fclose(f);
snprintf(p, sizeof p, "%s/emb_pg1.json", dir); f = fopen(p, "w"); fputs(EL_CSTR(pg1), f); fclose(f);
/* existing path — must be unchanged / carry NO emb */
el_val_t plain = engram_scan_nodes_json((el_val_t)256, (el_val_t)0);
snprintf(p, sizeof p, "%s/plain.json", dir); f = fopen(p, "w"); fputs(EL_CSTR(plain), f); fclose(f);
printf("wrote dumps to %s\n", dir);
return 0;
}
+124
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/* test_interoception_p1_consol.c — M-INTEROCEPTION Priority 1.
* Two-threshold consolidation (ENGRAM_CONSOLIDATION, default OFF).
*
* Modes:
* accrual — flag OFF (pure trunk). Drive N co-activations of a WIRED pair and
* print act-stats at sampled N so the run script can plot the
* hebb accrual curve (headline measurement). No consolidation code
* runs; this measures the EXISTING EWMA accrual.
* connect — flag ON. Seed, activate to populate WM, then create a STRONG ISE
* (connects to wm_top) and a WEAK ISE (below the bar → nothing).
* Exports the graph so edges from each ISE can be counted.
* perm — flag ON. Load two OLD InternalStateEvent nodes; promote one to
* permanence; prune telemetry; export so the durable one is shown
* to survive while the ephemeral one is swept.
* offcheck — flag OFF. Prove creating an ISE forms NO edges and
* engram_consolidate_permanence is a no-op (byte-identical OFF path).
*/
#include "el_runtime.h"
#include <stdio.h>
#include <stdlib.h>
#include <string.h>
static el_val_t S(const char* s){ return EL_STR(s); }
static el_val_t F(double d){ return el_from_float(d); }
static void build_seed(void){
el_val_t a = engram_node_full(S("hebbian potentiation strengthens co-active memory links"),
S("Concept"), S("hebb-a"), F(0.9), F(0.85), F(1.0), S("Semantic"),
S("hebbian,memory,activation"));
el_val_t b = engram_node_full(S("co-active memory links accrue hebbian associative weight"),
S("Concept"), S("hebb-b"), F(0.9), F(0.85), F(1.0), S("Semantic"),
S("hebbian,memory,weight"));
el_val_t c = engram_node_full(S("unrelated culinary recipe for sourdough bread"),
S("Fact"), S("distractor-1"), F(0.4), F(0.4), F(1.0), S("Semantic"), S("food"));
el_val_t d = engram_node_full(S("the weather forecast predicts rain tomorrow afternoon"),
S("Fact"), S("distractor-2"), F(0.4), F(0.4), F(1.0), S("Semantic"), S("weather"));
engram_connect(a, b, F(0.8), S("associate"));
engram_connect(a, c, F(0.3), S("associate"));
engram_connect(b, d, F(0.3), S("associate"));
}
static const char* QUERY =
"hebbian potentiation co-active memory links associative weight";
int main(int argc, char** argv){
if (argc < 3){ fprintf(stderr,"usage: %s <accrual|connect|perm|offcheck> <dir>\n",argv[0]); return 2; }
const char* mode = argv[1];
const char* dir = argv[2];
char p[1024];
if (!strcmp(mode,"accrual")){
build_seed();
int samples[] = {1,10,50,100,250,500,1000,1625,2000,2500,3000};
int ns = (int)(sizeof samples/sizeof samples[0]);
int NMAX = samples[ns-1];
int si = 0;
for (int n=1; n<=NMAX; n++){
engram_activate_json(S(QUERY), (el_val_t)3);
if (si<ns && n==samples[si]){
printf("SAMPLE %d %s\n", n, EL_CSTR(engram_act_stats_json()));
si++;
}
}
return 0;
}
if (!strcmp(mode,"connect")){
build_seed();
engram_activate_json(S(QUERY), (el_val_t)3);
long long e_before = (long long)(int64_t)engram_edge_count();
/* STRONG ISE — should connect to wm_top */
el_val_t ise_strong = engram_node_full(S("strong internal state: focused on hebbian consolidation"),
S("InternalStateEvent"), S("ise-strong"), F(0.9), F(0.8), F(1.0), S("Working"), S("ise"));
long long e_after_strong = (long long)(int64_t)engram_edge_count();
/* WEAK ISE — below the connection bar (salience 0.3 < default 0.6) */
el_val_t ise_weak = engram_node_full(S("weak internal state: idle drift"),
S("InternalStateEvent"), S("ise-weak"), F(0.3), F(0.3), F(1.0), S("Working"), S("ise"));
long long e_after_weak = (long long)(int64_t)engram_edge_count();
printf("ISE_STRONG_ID %s\n", EL_CSTR(ise_strong));
printf("ISE_WEAK_ID %s\n", EL_CSTR(ise_weak));
printf("EDGES before=%lld after_strong=%lld after_weak=%lld\n",
e_before, e_after_strong, e_after_weak);
snprintf(p,sizeof p,"%s/connect.json",dir);
el_val_t g = engram_save(S(p)); (void)g;
return 0;
}
if (!strcmp(mode,"perm")){
/* Two OLD ISE nodes (created_at far in the past → prunable at 48h). */
snprintf(p,sizeof p,"%s/seed.json",dir);
FILE* f=fopen(p,"w");
fprintf(f,"{\"nodes\":["
"{\"id\":\"ise-durable\",\"content\":\"promoted internal state\",\"node_type\":\"InternalStateEvent\","
"\"label\":\"ise-durable\",\"salience\":0.5,\"confidence\":1.0,\"created_at\":1000},"
"{\"id\":\"ise-ephemeral\",\"content\":\"transient internal state\",\"node_type\":\"InternalStateEvent\","
"\"label\":\"ise-ephemeral\",\"salience\":0.5,\"confidence\":1.0,\"created_at\":1000}"
"],\"edges\":[]}");
fclose(f);
if(!engram_load(S(p))){ fprintf(stderr,"load failed\n"); return 2; }
long long n_before = (long long)(int64_t)engram_node_count();
el_val_t promoted = engram_consolidate_permanence(S("ise-durable"));
long long removed = (long long)(int64_t)engram_prune_telemetry((el_val_t)0); /* default 48h */
long long n_after = (long long)(int64_t)engram_node_count();
printf("PROMOTED %lld\n", (long long)(int64_t)promoted);
printf("NODES before=%lld after=%lld removed=%lld\n", n_before, n_after, removed);
printf("DURABLE_NODE %s\n", EL_CSTR(engram_get_node_json(S("ise-durable"))));
printf("EPHEMERAL_NODE %s\n", EL_CSTR(engram_get_node_json(S("ise-ephemeral"))));
return 0;
}
if (!strcmp(mode,"offcheck")){
build_seed();
engram_activate_json(S(QUERY), (el_val_t)3);
long long e_before = (long long)(int64_t)engram_edge_count();
engram_node_full(S("strong internal state with flag OFF"),
S("InternalStateEvent"), S("ise-off"), F(0.9), F(0.8), F(1.0), S("Working"), S("ise"));
long long e_after = (long long)(int64_t)engram_edge_count();
el_val_t perm = engram_consolidate_permanence(S("ise-off"));
printf("OFF edges before=%lld after=%lld perm_ret=%lld\n",
e_before, e_after, (long long)(int64_t)perm);
return (e_before==e_after && (int64_t)perm==0) ? 0 : 1;
}
fprintf(stderr,"unknown mode %s\n",mode); return 2;
}
@@ -0,0 +1,95 @@
/* test_interoception_p2_chrono.c — M-INTEROCEPTION Priority 2.
* Chronoception: engram_age_field(delta_ms) + reboot catch-up
* (ENGRAM_CHRONOCEPTION, default OFF).
*
* Uses loaded snapshots with KNOWN working_memory_weight / background_activation
* so the field is deterministic without depending on activation. (engram_load
* halves WM on boot — the laundering step — so snapshot wm 1.0 -> 0.5 resident.)
*
* Modes:
* once <dir> <dt_ms> — age the field once by dt; save field.json.
* split <dir> <dt_ms> <N> — age by dt/N, N times; save field.json.
* (once vs split must match: scale-invariance.)
* catchup <dir> <gap_ms> — write a last-tick gap_ms in the past, then
* engram_age_field_catchup(); print MAGNITUDE.
* offcheck <dir> <dt_ms> — flag OFF: age returns 0 and field is untouched.
*/
#include "el_runtime.h"
#include <stdio.h>
#include <stdlib.h>
#include <string.h>
#include <sys/time.h>
static el_val_t S(const char* s){ return EL_STR(s); }
static void write_seed(const char* dir){
char p[1024]; snprintf(p,sizeof p,"%s/seed.json",dir);
FILE* f=fopen(p,"w");
fprintf(f,"{\"nodes\":["
"{\"id\":\"f1\",\"content\":\"field node 1\",\"node_type\":\"Concept\",\"label\":\"f1\","
"\"salience\":0.9,\"confidence\":1.0,\"working_memory_weight\":1.0,\"background_activation\":0.5},"
"{\"id\":\"f2\",\"content\":\"field node 2\",\"node_type\":\"Concept\",\"label\":\"f2\","
"\"salience\":0.8,\"confidence\":1.0,\"working_memory_weight\":0.8,\"background_activation\":0.4},"
"{\"id\":\"f3\",\"content\":\"field node 3\",\"node_type\":\"Concept\",\"label\":\"f3\","
"\"salience\":0.7,\"confidence\":1.0,\"working_memory_weight\":0.6,\"background_activation\":0.3}"
"],\"edges\":[]}");
fclose(f);
}
static void load_seed(const char* dir){
char p[1024]; snprintf(p,sizeof p,"%s/seed.json",dir);
write_seed(dir);
if(!engram_load(S(p))){ fprintf(stderr,"load failed\n"); exit(2); }
}
static void save_field(const char* dir){
char p[1024]; snprintf(p,sizeof p,"%s/field.json",dir);
engram_save(S(p));
}
int main(int argc,char** argv){
if(argc<3){ fprintf(stderr,"usage: %s <once|split|catchup|offcheck> <dir> ...\n",argv[0]); return 2; }
const char* mode=argv[1];
const char* dir =argv[2];
if(!strcmp(mode,"once")){
double dt=atof(argv[3]);
load_seed(dir);
el_val_t mag=engram_age_field((el_val_t)(int64_t)dt);
printf("MAGNITUDE %.10f\n", el_to_float(mag));
save_field(dir);
return 0;
}
if(!strcmp(mode,"split")){
double dt=atof(argv[3]); int N=atoi(argv[4]); if(N<1)N=1;
load_seed(dir);
double sub=dt/(double)N;
for(int i=0;i<N;i++) engram_age_field((el_val_t)(int64_t)sub);
save_field(dir);
printf("SPLIT dt=%.0f N=%d sub=%.4f\n", dt, N, sub);
return 0;
}
if(!strcmp(mode,"catchup")){
double gap=atof(argv[3]);
load_seed(dir);
/* Write a last-tick gap_ms in the past. ENGRAM_DATA_DIR is set == dir by
* the runner, so the sidecar the runtime reads is <dir>/chrono_last_tick. */
struct timeval tv; gettimeofday(&tv,NULL);
long long now_ms=(long long)tv.tv_sec*1000+tv.tv_usec/1000;
long long last=now_ms-(long long)gap;
char p[1200]; snprintf(p,sizeof p,"%s/chrono_last_tick",dir);
FILE* f=fopen(p,"w"); fprintf(f,"%lld\n",last); fclose(f);
el_val_t mag=engram_age_field_catchup();
printf("CATCHUP_MAGNITUDE %.10f\n", el_to_float(mag));
save_field(dir);
return 0;
}
if(!strcmp(mode,"offcheck")){
double dt=atof(argv[3]);
load_seed(dir);
el_val_t mag=engram_age_field((el_val_t)(int64_t)dt);
el_val_t magc=engram_age_field_catchup();
printf("OFF age_mag=%.10f catchup_mag=%.10f\n", el_to_float(mag), el_to_float(magc));
save_field(dir);
return 0;
}
fprintf(stderr,"unknown mode %s\n",mode); return 2;
}
+61
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@@ -0,0 +1,61 @@
/* test_interoception_p3_drift.c — M-INTEROCEPTION Priority 3 (PARTIAL).
* Drift-sensor primitive engram_geo_displacement: GROWTH vs CORRUPTION split.
*
* Constructs synthetic GeoDescriptors (the struct is public) — a baseline and
* two perturbations — and checks the sensor reports LOW core-displacement for a
* periphery-only change (growth) and HIGH core-displacement for a core change
* (corruption). No store / embeddings needed: this exercises the primitive in
* isolation, which is the honest scope given there is no persisted SelfAnchor
* yet (see engram_geometry.c). */
#include "engram_geometry.h"
#include <stdlib.h>
#include <string.h>
#include <stdio.h>
static GeoMember MK(const char* id, double centrality, double dist){
GeoMember m; memset(&m,0,sizeof m);
m.id=strdup(id); m.centrality=centrality; m.dist_centroid=dist;
m.membership=1.0; m.embedded=1; return m;
}
/* 4 members: 2 core (high centrality), 2 periphery (low). */
static GeoDescriptor* mkdesc(float cx,float cy,double radius,
double c1,double c2,double p1,double p2){
GeoDescriptor* g=calloc(1,sizeof *g);
g->dim=4;
g->centroid=calloc(4,sizeof(float));
g->centroid[0]=cx; g->centroid[1]=cy;
g->radius=radius;
g->n_members=4;
g->members=calloc(4,sizeof(GeoMember));
g->members[0]=MK("core1",10.0,c1);
g->members[1]=MK("core2", 9.0,c2);
g->members[2]=MK("per1", 1.0,p1);
g->members[3]=MK("per2", 0.9,p2);
return g;
}
int main(void){
GeoDisplacement d;
/* baseline: core at 0.10, periphery at 0.50, centroid [1,0], radius 1.0 */
GeoDescriptor* A = mkdesc(1.0f,0.0f,1.0, 0.10,0.10, 0.50,0.50);
/* (i) GROWTH: periphery extends 0.50->0.90; core fixed; radius grows. */
GeoDescriptor* G = mkdesc(1.0f,0.0f,1.4, 0.10,0.10, 0.90,0.90);
engram_geo_displacement(A,G,0.5,&d);
printf("GROWTH centroid_sep=%.4f centroid_cos=%.4f radius_delta=%.4f core_disp=%.4f periph_disp=%.4f core_n=%d periph_n=%d\n",
d.centroid_sep,d.centroid_cos,d.radius_delta,d.core_disp,d.periph_disp,d.core_matched,d.periph_matched);
/* (ii) CORRUPTION: core displaces 0.10->0.60; periphery fixed; centroid shifts. */
GeoDescriptor* C = mkdesc(0.6f,0.4f,1.0, 0.60,0.60, 0.50,0.50);
engram_geo_displacement(A,C,0.5,&d);
printf("CORRUPTION centroid_sep=%.4f centroid_cos=%.4f radius_delta=%.4f core_disp=%.4f periph_disp=%.4f core_n=%d periph_n=%d\n",
d.centroid_sep,d.centroid_cos,d.radius_delta,d.core_disp,d.periph_disp,d.core_matched,d.periph_matched);
/* identity: A vs A -> zero drift */
engram_geo_displacement(A,A,0.5,&d);
printf("IDENTITY centroid_sep=%.4f core_disp=%.4f periph_disp=%.4f\n",
d.centroid_sep,d.core_disp,d.periph_disp);
engram_geo_free(A); engram_geo_free(G); engram_geo_free(C);
return 0;
}
@@ -0,0 +1,35 @@
/* test_interoception_p4_afferent.c — M-INTEROCEPTION Priority 4.
* Afferent input counters in engram_act_stats_json: additive observability.
* Drives KNOWN counts and asserts the emitted counters match and are monotonic.
*/
#include "el_runtime.h"
#include <stdio.h>
#include <stdlib.h>
#include <string.h>
static el_val_t S(const char* s){ return EL_STR(s); }
static el_val_t F(double d){ return el_from_float(d); }
int main(void){
/* 3 plain node creates + 2 ISE creates = 5 node_creates, 2 ise_ingests */
el_val_t a=engram_node_full(S("alpha concept about memory and time"),S("Concept"),S("a"),F(0.9),F(0.8),F(1.0),S("Semantic"),S("x"));
el_val_t b=engram_node_full(S("beta concept about memory and links"),S("Concept"),S("b"),F(0.9),F(0.8),F(1.0),S("Semantic"),S("x"));
engram_node_full(S("gamma distractor"),S("Fact"),S("c"),F(0.4),F(0.4),F(1.0),S("Semantic"),S("y"));
engram_node_full(S("heartbeat internal state one"),S("InternalStateEvent"),S("i1"),F(0.5),F(0.5),F(1.0),S("Working"),S("ise"));
engram_node_full(S("curiosity internal state two"),S("InternalStateEvent"),S("i2"),F(0.5),F(0.5),F(1.0),S("Working"),S("ise"));
/* 2 edge creates */
engram_connect(a,b,F(0.8),S("associate"));
engram_connect(b,a,F(0.3),S("associate"));
/* first reading (0 queries so far) */
printf("STATS0 %s\n", EL_CSTR(engram_act_stats_json()));
/* 4 queries -> 4 activations */
for(int i=0;i<4;i++) engram_activate_json(S("memory and time and links"), (el_val_t)2);
printf("STATS1 %s\n", EL_CSTR(engram_act_stats_json()));
/* 3 more queries -> monotonic increase */
for(int i=0;i<3;i++) engram_activate_json(S("memory and time and links"), (el_val_t)2);
printf("STATS2 %s\n", EL_CSTR(engram_act_stats_json()));
return 0;
}
@@ -0,0 +1,47 @@
/* test_interoception_p5_dreams.c — M-INTEROCEPTION Priority 5.
* Dream-recall-on-wake: engram_dreams_json(since_ms). Honesty rail — only
* curiosity_scan ISEs still resident are returned; pruned (rotated-out) ones are
* ABSENT (never confabulated); heartbeat ISEs are excluded.
*/
#include "el_runtime.h"
#include <stdio.h>
#include <stdlib.h>
#include <string.h>
#include <sys/time.h>
static el_val_t S(const char* s){ return EL_STR(s); }
int main(int argc,char** argv){
if(argc<2){ fprintf(stderr,"usage: %s <dir>\n",argv[0]); return 2; }
const char* dir=argv[1];
struct timeval tv; gettimeofday(&tv,NULL);
long long now=(long long)tv.tv_sec*1000+tv.tv_usec/1000;
long long mid=now-3600000; /* 1h ago */
long long ancient=1000; /* pruned by 48h retention */
char p[1024]; snprintf(p,sizeof p,"%s/seed.json",dir);
FILE* f=fopen(p,"w");
fprintf(f,"{\"nodes\":["
"{\"id\":\"cur_old\",\"content\":\"{\\\"kind\\\":\\\"curiosity_scan\\\",\\\"q\\\":\\\"old wondering\\\"}\","
"\"node_type\":\"InternalStateEvent\",\"label\":\"state-event\",\"created_at\":%lld},"
"{\"id\":\"cur_mid\",\"content\":\"{\\\"kind\\\":\\\"curiosity_scan\\\",\\\"q\\\":\\\"mid wondering\\\"}\","
"\"node_type\":\"InternalStateEvent\",\"label\":\"state-event\",\"created_at\":%lld},"
"{\"id\":\"cur_recent\",\"content\":\"{\\\"kind\\\":\\\"curiosity_scan\\\",\\\"q\\\":\\\"recent wondering\\\"}\","
"\"node_type\":\"InternalStateEvent\",\"label\":\"state-event\",\"created_at\":%lld},"
"{\"id\":\"hb_recent\",\"content\":\"{\\\"kind\\\":\\\"heartbeat\\\",\\\"wm\\\":3}\","
"\"node_type\":\"InternalStateEvent\",\"label\":\"state-event\",\"created_at\":%lld}"
"],\"edges\":[]}", ancient, mid, now, now);
fclose(f);
if(!engram_load(S(p))){ fprintf(stderr,"load failed\n"); return 2; }
/* before prune: all resident curiosity_scan after since=0 */
printf("BEFORE %s\n", EL_CSTR(engram_dreams_json((el_val_t)0)));
/* prune 48h — cur_old (ancient) rotates out */
long long pruned=(long long)(int64_t)engram_prune_telemetry((el_val_t)0);
printf("PRUNED %lld\n", pruned);
printf("AFTER %s\n", EL_CSTR(engram_dreams_json((el_val_t)0)));
/* since filter: only events created after 30 min ago -> cur_recent only */
long long since=now-1800000;
printf("SINCE %lld %s\n", since, EL_CSTR(engram_dreams_json((el_val_t)(int64_t)since)));
return 0;
}
+130
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@@ -0,0 +1,130 @@
/* test_m35_hebb_persist.c — M3.5 PRE-FLIP GATE.
*
* Proves that in-place field mutations made during spreading activation — edge
* `hebb` (+ last_fired), node `activation_count`, node working-memory weight —
* PERSIST to the paged store and survive a restart from neuron.egm with
* snapshot.json deleted. This is the "hebb-survives-restart" fix that gates the
* live cutover.
*
* Same style as test_m3_parity.c: a REAL el-level harness linking the actual
* el_runtime.c native engram builtins + engram_store.c, driving engram_node_full
* / engram_connect / engram_activate_json / engram_save / engram_store_boot /
* engram_store_checkpoint / engram_store_close directly from C. No EL interpreter.
*
* Modes (argv[1]), data dir (argv[2]):
* pos_seed — ENGRAM_STORE=1: fresh store, seed a graph tuned so activation
* co-activates a connected pair (edge hebb 0 -> ETA) and reinforces
* nodes (activation_count 0 -> >=1, WM weight -> >0). Export the
* post-activation resident graph to pre_reboot.json, then CHECKPOINT
* (the M3.5 field-persist), then close.
* pos_reboot— ENGRAM_STORE=1, snapshot.json deleted by runner: boot from
* neuron.egm (WAL replay), export reboot.json, close. The values in
* reboot.json are what actually survived the round-trip.
* neg_seed — identical to pos_seed but WITHOUT the checkpoint field-persist
* (negative control): activation mutations never reach the store.
* neg_reboot— boot from neuron.egm, export neg_reboot.json, close.
* offcheck — ENGRAM_STORE unset: seed+activate+checkpoint must NOT touch the
* store (no neuron.egm, checkpoint returns 0).
*
* The pass/fail assertions live in run_m35_hebb_persist.sh (python over the JSON
* exports): reboot.json must carry the learned hebb / activation_count and the
* JSON-identical halved WM weight; neg_reboot.json must have LOST them.
*/
#include "el_runtime.h"
#include <stdio.h>
#include <stdlib.h>
#include <string.h>
extern int engram_store_enabled(void);
extern el_val_t engram_store_boot(el_val_t data_dir);
extern el_val_t engram_store_checkpoint(void);
extern el_val_t engram_store_close(void);
static el_val_t S(const char* s){ return EL_STR(s); }
static el_val_t F(double d){ return el_from_float(d); }
/* Two nodes with DISTINCT content (so the redundancy-suppression pass cannot
* dedup one of them away) that both match the query strongly, wired by one
* "associate" edge. A handful of weakly-related distractors make it a real
* graph. On activation both A and B promote to working memory and co-activate,
* so their edge's hebb rises from 0 to ENGRAM_HEBB_ETA. */
static void build_seed(void){
el_val_t a = engram_node_full(S("hebbian potentiation strengthens co-active memory links"),
S("Concept"), S("hebb-a"), F(0.9), F(0.85), F(1.0), S("Semantic"),
S("hebbian,memory,activation"));
el_val_t b = engram_node_full(S("co-active memory links accrue hebbian associative weight"),
S("Concept"), S("hebb-b"), F(0.9), F(0.85), F(1.0), S("Semantic"),
S("hebbian,memory,weight"));
el_val_t c = engram_node_full(S("unrelated culinary recipe for sourdough bread"),
S("Fact"), S("distractor-1"), F(0.4), F(0.4), F(1.0), S("Semantic"),
S("food"));
el_val_t d = engram_node_full(S("the weather forecast predicts rain tomorrow afternoon"),
S("Fact"), S("distractor-2"), F(0.4), F(0.4), F(1.0), S("Semantic"),
S("weather"));
engram_connect(a, b, F(0.8), S("associate")); /* the edge under test */
engram_connect(a, c, F(0.3), S("associate"));
engram_connect(b, d, F(0.3), S("associate"));
}
static const char* QUERY =
"hebbian potentiation co-active memory links associative weight";
static void export_graph(const char* dir, const char* name){
char p[1024];
snprintf(p, sizeof p, "%s/%s", dir, name);
if (!engram_save(S(p))){ fprintf(stderr, "save %s failed\n", name); exit(2); }
}
int main(int argc, char** argv){
if (argc < 3){
fprintf(stderr, "usage: %s <pos_seed|pos_reboot|neg_seed|neg_reboot|offcheck> <dir>\n", argv[0]);
return 2;
}
const char* mode = argv[1];
const char* dir = argv[2];
if (!strcmp(mode, "pos_seed") || !strcmp(mode, "neg_seed")){
int persist = !strcmp(mode, "pos_seed");
if (!engram_store_enabled()){ fprintf(stderr, "%s requires ENGRAM_STORE=1\n", mode); return 2; }
if (!engram_store_boot(S(dir))){ fprintf(stderr, "store boot failed\n"); return 2; }
build_seed();
el_val_t act = engram_activate_json(S(QUERY), (el_val_t)3);
(void)act;
/* Capture the post-activation resident state BEFORE persisting/closing. */
export_graph(dir, persist ? "pre_reboot.json" : "neg_pre.json");
printf("[%s] nodes=%lld edges=%lld\n", mode,
(long long)(int64_t)engram_node_count(),
(long long)(int64_t)engram_edge_count());
if (persist){
if (!engram_store_checkpoint()){ fprintf(stderr, "checkpoint failed\n"); return 2; }
}
/* neg mode: NO field-persist checkpoint. engram_store_close still flushes
* pages, but no store_put_* ran post-creation, so the store keeps the
* pristine creation-time field values (hebb=0, activation_count=0). */
engram_store_close();
return 0;
}
if (!strcmp(mode, "pos_reboot") || !strcmp(mode, "neg_reboot")){
if (!engram_store_enabled()){ fprintf(stderr, "%s requires ENGRAM_STORE=1\n", mode); return 2; }
/* snapshot.json deleted by the runner — boot MUST come from neuron.egm. */
if (!engram_store_boot(S(dir))){ fprintf(stderr, "reboot boot failed\n"); return 2; }
export_graph(dir, !strcmp(mode, "pos_reboot") ? "reboot.json" : "neg_reboot.json");
printf("[%s] nodes=%lld edges=%lld\n", mode,
(long long)(int64_t)engram_node_count(),
(long long)(int64_t)engram_edge_count());
engram_store_close();
return 0;
}
if (!strcmp(mode, "offcheck")){
int en = engram_store_enabled();
el_val_t boot = engram_store_boot(S(dir)); /* no-op with flag off */
build_seed();
engram_activate_json(S(QUERY), (el_val_t)3);
el_val_t ck = engram_store_checkpoint(); /* must be a no-op */
printf("[offcheck] enabled=%d boot=%lld checkpoint=%lld\n",
en, (long long)(int64_t)boot, (long long)(int64_t)ck);
return (en == 0 && (int64_t)boot == 0 && (int64_t)ck == 0) ? 0 : 1;
}
fprintf(stderr, "unknown mode %s\n", mode);
return 2;
}
+155
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@@ -0,0 +1,155 @@
/* test_m3_parity.c — M3 JSON-parity gate for the ENGRAM_STORE wiring.
*
* This is a REAL el-level harness: it links the actual el_runtime.o (the soul's
* native engram builtins) + engram_store.o and calls the engram_node family plus
* engram_connect, engram_activate_json, engram_save, engram_store_boot directly. No EL interpreter
* and no full soul build are needed — el_runtime.c compiles to a standalone .o
* whose engram builtins operate on the process-global engram store, and the
* string arena is inert unless el_request_start() is called, so the builtins are
* callable straight from C (el_val_t is int64_t; EL_STR/EL_CSTR are pointer casts).
*
* Modes (argv[1]), data dir (argv[2]):
* seed — ENGRAM_STORE unset: build a fixed seed graph, write snapshot.json +
* off_graph.json (pristine, pre-activation), then activate → off_act.json.
* on — ENGRAM_STORE=1: engram_store_boot(dir) imports snapshot.json ONCE into
* neuron.egm and loads it resident; write on_graph.json, then activate →
* on_act.json; checkpoint + close.
* reboot — ENGRAM_STORE=1 with snapshot.json DELETED: boot must reload from
* neuron.egm (WAL replay), never re-reading JSON; write reboot_graph.json.
* offcheck — assert flag-off leaves the store untouched.
*
* The graph comparison (done by run_m3_parity.sh via python, modulo ordering) is
* the deterministic gate; activation ids/promoted are compared as a robust set.
*/
#include "el_runtime.h"
#include <stdio.h>
#include <stdlib.h>
#include <string.h>
/* Builtins the header declares are pulled in via el_runtime.h. The M3 additions
* are not in the header yet, so declare them here. */
extern int engram_store_enabled(void);
extern el_val_t engram_store_boot(el_val_t data_dir);
extern el_val_t engram_store_checkpoint(void);
extern el_val_t engram_store_close(void);
extern el_val_t engram_node_layered(el_val_t content, el_val_t node_type, el_val_t label,
el_val_t salience, el_val_t certainty, el_val_t confidence,
el_val_t status, el_val_t tags, el_val_t layer_id);
static el_val_t S(const char* s){ return EL_STR(s); }
static el_val_t F(double d){ return el_from_float(d); }
/* Build a fixed, deterministic seed graph: 12 nodes across two layers + 9 edges.
* Content is chosen so an activation query has real matches to rank. */
static void build_seed(void){
/* core-identity layer (1) via engram_node_full */
el_val_t n0 = engram_node_full(S("tiered storage engine design"), S("Concept"),
S("storage-engine"), F(0.9), F(0.8), F(1.0), S("Semantic"), S("design,storage"));
el_val_t n1 = engram_node_full(S("write-ahead log durability"), S("Concept"),
S("wal"), F(0.85), F(0.75), F(1.0), S("Semantic"), S("wal,durability"));
el_val_t n2 = engram_node_full(S("paged buffer pool with checkpointing"), S("Concept"),
S("buffer-pool"), F(0.8), F(0.7), F(1.0), S("Semantic"), S("paging"));
el_val_t n3 = engram_node_full(S("spreading activation over the graph"), S("Concept"),
S("activation"), F(0.8), F(0.7), F(1.0), S("Semantic"), S("activation,graph"));
el_val_t n4 = engram_node_full(S("hebbian co-activation potentiation"), S("Concept"),
S("hebbian"), F(0.7), F(0.6), F(1.0), S("Semantic"), S("hebb"));
el_val_t n5 = engram_node_full(S("crash recovery replays the log"), S("Concept"),
S("recovery"), F(0.75), F(0.65), F(1.0), S("Semantic"), S("recovery,wal"));
/* domain-knowledge layer (2) via engram_node_layered */
el_val_t n6 = engram_node_layered(S("b-tree primary index id to location"), S("Fact"),
S("btree"), F(0.7), F(0.6), F(1.0), S(""), S("index"), (el_val_t)2);
el_val_t n7 = engram_node_layered(S("adjacency index for edge lookup"), S("Fact"),
S("adjacency"), F(0.7), F(0.6), F(1.0), S(""), S("index,graph"), (el_val_t)2);
el_val_t n8 = engram_node_layered(S("slotted pages hold tlv records"), S("Fact"),
S("slotted-page"), F(0.65), F(0.55), F(1.0), S(""), S("format"), (el_val_t)2);
el_val_t n9 = engram_node_full(S("memory tiers working semantic episodic"), S("Concept"),
S("tiers"), F(0.7), F(0.6), F(1.0), S("Semantic"), S("tiers,memory"));
el_val_t n10 = engram_node_full(S("embeddings enable nearest neighbour search"), S("Concept"),
S("embeddings"), F(0.65), F(0.55), F(1.0), S("Semantic"), S("embeddings"));
el_val_t n11 = engram_node_full(S("the durable engram is the mind's memory"), S("Belief"),
S("engram"), F(0.95), F(0.9), F(1.0), S("Semantic"), S("engram,memory"));
engram_connect(n0, n1, F(0.8), S("depends-on"));
engram_connect(n0, n2, F(0.8), S("depends-on"));
engram_connect(n0, n3, F(0.7), S("enables"));
engram_connect(n1, n5, F(0.9), S("enables"));
engram_connect(n3, n4, F(0.6), S("triggers"));
engram_connect(n2, n6, F(0.7), S("uses"));
engram_connect(n3, n7, F(0.7), S("uses"));
engram_connect(n0, n8, F(0.6), S("uses"));
engram_connect(n11, n9, F(0.8), S("about"));
engram_connect(n11, n10, F(0.5), S("about"));
}
static void write_file(const char* path, const char* content){
FILE* f = fopen(path, "wb");
if (!f){ fprintf(stderr, "cannot open %s\n", path); exit(2); }
if (content) fwrite(content, 1, strlen(content), f);
fclose(f);
}
static const char* QUERY = "storage engine activation and the durable log";
int main(int argc, char** argv){
if (argc < 3){ fprintf(stderr, "usage: %s <seed|on|reboot|offcheck> <dir>\n", argv[0]); return 2; }
const char* mode = argv[1];
const char* dir = argv[2];
char p[1024];
if (!strcmp(mode, "seed")){
if (engram_store_enabled()){ fprintf(stderr, "seed mode requires ENGRAM_STORE unset\n"); return 2; }
build_seed();
snprintf(p, sizeof p, "%s/snapshot.json", dir);
if (!engram_save(S(p))){ fprintf(stderr, "seed save failed\n"); return 2; }
snprintf(p, sizeof p, "%s/off_graph.json", dir);
engram_save(S(p)); /* pristine off-path graph */
el_val_t act = engram_activate_json(S(QUERY), (el_val_t)3);
snprintf(p, sizeof p, "%s/off_act.json", dir);
write_file(p, EL_CSTR(act));
printf("[seed] nodes=%lld edges=%lld\n",
(long long)(int64_t)engram_node_count(), (long long)(int64_t)engram_edge_count());
return 0;
}
if (!strcmp(mode, "on")){
if (!engram_store_enabled()){ fprintf(stderr, "on mode requires ENGRAM_STORE=1\n"); return 2; }
if (!engram_store_boot(S(dir))){ fprintf(stderr, "store boot failed\n"); return 2; }
snprintf(p, sizeof p, "%s/on_graph.json", dir);
engram_save(S(p)); /* export resident (== store) */
/* Checkpoint the freshly-imported (pristine) graph — this is the state
* the reboot comparison expects to round-trip. Under M3.5 a checkpoint
* persists the resident graph's CURRENT field state, so it must run
* BEFORE activation mutates fields in place; activation itself is
* exercised below only for the activation-result-set parity check. The
* M3.5 gate (test_m35_hebb_persist) separately proves that a checkpoint
* taken AFTER activation durably carries the learned hebb/WM state. */
engram_store_checkpoint();
el_val_t act = engram_activate_json(S(QUERY), (el_val_t)3);
snprintf(p, sizeof p, "%s/on_act.json", dir);
write_file(p, EL_CSTR(act));
printf("[on] nodes=%lld edges=%lld\n",
(long long)(int64_t)engram_node_count(), (long long)(int64_t)engram_edge_count());
engram_store_close();
return 0;
}
if (!strcmp(mode, "reboot")){
if (!engram_store_enabled()){ fprintf(stderr, "reboot mode requires ENGRAM_STORE=1\n"); return 2; }
/* snapshot.json has been deleted by the runner — boot MUST come from
* neuron.egm (+ WAL replay), never re-reading JSON. */
if (!engram_store_boot(S(dir))){ fprintf(stderr, "reboot boot failed\n"); return 2; }
snprintf(p, sizeof p, "%s/reboot_graph.json", dir);
engram_save(S(p));
printf("[reboot] nodes=%lld edges=%lld\n",
(long long)(int64_t)engram_node_count(), (long long)(int64_t)engram_edge_count());
engram_store_close();
return 0;
}
if (!strcmp(mode, "offcheck")){
/* ENGRAM_STORE unset: enabled()==0 and boot is a no-op returning 0. */
int en = engram_store_enabled();
el_val_t b = engram_store_boot(S(dir));
printf("[offcheck] enabled=%d boot_ret=%lld\n", en, (long long)(int64_t)b);
return (en == 0 && (int64_t)b == 0) ? 0 : 1;
}
fprintf(stderr, "unknown mode %s\n", mode);
return 2;
}
+208
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@@ -0,0 +1,208 @@
/* test_m7_traversal.c — M7 index-driven activation traversal.
*
* Milestone 7 replaces the O(E) full adjacency rebuild that spreading activation
* paid before every BFS with an incrementally-maintained per-node index, behind
* the ENGRAM_STORE flag (flag-off = unchanged behavior). This harness links the
* REAL el_runtime.c engram builtins (+ engram_store.c) and drives activation
* directly — no EL interpreter, no store boot (the index optimization is a pure
* in-RAM concern; the flag is read from the environment).
*
* Modes (argv[1]):
* parity-off <dir> — ENGRAM_STORE unset: build a fixed graph, run a scripted
* sequence of activations WITH mid-sequence edge/node
* inserts, dump each activation's JSON to <dir>/off_actN.json.
* parity-on <dir> — ENGRAM_STORE=1: identical graph + identical sequence,
* dump to <dir>/on_actN.json. The runner asserts the off/on
* files are BYTE-IDENTICAL (same activated set, weights,
* ordering, hops, WM promotion).
* perf <off|on> <dir> <nodes> <edges> <iters>
* — build a large graph, then loop `iters` times doing
* (add 1 edge + activate). Prints wall-time and the M7
* instrumentation counters (rebuild calls / rebuild
* edge-work / incremental appends).
*
* Writes ONLY under the caller-provided throwaway dir.
*/
#include "el_runtime.h"
#include <stdio.h>
#include <stdlib.h>
#include <string.h>
#include <time.h>
/* M7 instrumentation getters (test-only; defined in el_runtime.c). */
extern int64_t engram_adj_rebuild_calls(void);
extern int64_t engram_adj_rebuild_edge_work(void);
extern int64_t engram_adj_incr_appends(void);
extern double engram_adj_maint_seconds(void);
extern void engram_adj_test_force_dirty(void);
extern int engram_store_enabled(void);
static el_val_t S(const char* s){ return EL_STR(s); }
static el_val_t F(double d){ return el_from_float(d); }
/* Deterministic LCG so off/on processes build byte-identical graphs. */
static uint64_t g_rng = 0x9E3779B97F4A7C15ULL;
static void rng_seed(uint64_t s){ g_rng = s ? s : 1; }
static uint64_t rng_next(void){ g_rng = g_rng * 6364136223846793005ULL + 1442695040888963407ULL; return g_rng >> 17; }
static el_val_t* g_handles = NULL; /* node id handles from engram_node_full */
static int64_t g_nnodes = 0;
static void write_file(const char* path, const char* content){
FILE* f = fopen(path, "wb");
if (!f){ fprintf(stderr, "cannot open %s\n", path); exit(2); }
if (content) fwrite(content, 1, strlen(content), f);
fclose(f);
}
/* Build `n` nodes whose content carries query-matchable tokens, then `m`
* deterministic edges among them. Handles are retained for later connect. */
static void build_graph(int64_t n, int64_t m){
g_handles = malloc((size_t)n * sizeof(el_val_t));
g_nnodes = n;
static const char* topics[] = {
"storage engine durable log", "spreading activation graph traversal",
"hebbian potentiation memory", "buffer pool paging checkpoint",
"adjacency index edge lookup", "working memory promotion",
"b-tree primary index", "embeddings nearest neighbour" };
for (int64_t i = 0; i < n; i++){
char content[256];
snprintf(content, sizeof content,
"node %lld about %s and storage engine activation index",
(long long)i, topics[(size_t)(i % 8)]);
char label[32]; snprintf(label, sizeof label, "n%lld", (long long)i);
g_handles[i] = engram_node_full(S(content), S("Concept"), S(label),
F(0.7), F(0.6), F(1.0), S("Semantic"), S("storage,graph,index"));
}
for (int64_t k = 0; k < m; k++){
int64_t a = (int64_t)(rng_next() % (uint64_t)n);
int64_t b = (int64_t)(rng_next() % (uint64_t)n);
if (a == b) b = (b + 1) % n;
engram_connect(g_handles[a], g_handles[b], F(0.6), S("associate"));
}
}
static const char* Q1 = "storage engine activation and the durable log";
static const char* Q2 = "adjacency index graph traversal";
/* One scripted activation with an optional forced full-rebuild first. */
static el_val_t act(const char* q, int depth, int force_rebuild){
if (force_rebuild) engram_adj_test_force_dirty();
return engram_activate_json(S(q), (el_val_t)depth);
}
/* Run the scripted parity sequence and dump each activation JSON. `tag` names
* the output set. When force_rebuild is set, every activation first forces the
* O(E) full-rebuild path (the pre-M7 "scan" behavior); otherwise the M7
* incremental index is used. The graph build + query sequence are byte-for-byte
* deterministic, so any difference between two runs is attributable solely to
* the difference in adjacency maintenance (and/or the ENGRAM_STORE flag). */
static int run_parity(const char* dir, const char* tag, int force_rebuild){
char p[1024];
rng_seed(0xC0FFEE123ULL);
build_graph(60, 140);
el_val_t a1 = act(Q1, 3, force_rebuild);
snprintf(p, sizeof p, "%s/%s_act1.json", dir, tag); write_file(p, EL_CSTR(a1));
/* Mutate the graph BETWEEN activations: this is exactly where the M7 path
* appends incrementally while the rebuild path marks dirty + fully rebuilds.
* Parity must hold across this divergence in HOW the index is maintained. */
engram_connect(g_handles[0], g_handles[7], F(0.8), S("depends-on"));
engram_connect(g_handles[7], g_handles[23], F(0.7), S("enables"));
engram_connect(g_handles[23], g_handles[41],F(0.5), S("uses"));
el_val_t hnew = engram_node_full(S("freshly minted storage index node about activation"),
S("Concept"), S("nnew"), F(0.8), F(0.7), F(1.0), S("Semantic"), S("storage,index"));
engram_connect(g_handles[0], hnew, F(0.9), S("about"));
el_val_t a2 = act(Q1, 3, force_rebuild);
snprintf(p, sizeof p, "%s/%s_act2.json", dir, tag); write_file(p, EL_CSTR(a2));
el_val_t a3 = act(Q2, 2, force_rebuild);
snprintf(p, sizeof p, "%s/%s_act3.json", dir, tag); write_file(p, EL_CSTR(a3));
el_val_t a4 = act(Q1, 3, force_rebuild);
snprintf(p, sizeof p, "%s/%s_act4.json", dir, tag); write_file(p, EL_CSTR(a4));
printf("[parity-%s] enabled=%d force_rebuild=%d nodes=%lld edges=%lld "
"rebuilds=%lld rebuild_edge_work=%lld incr_appends=%lld\n",
tag, engram_store_enabled(), force_rebuild,
(long long)(int64_t)engram_node_count(), (long long)(int64_t)engram_edge_count(),
(long long)engram_adj_rebuild_calls(), (long long)engram_adj_rebuild_edge_work(),
(long long)engram_adj_incr_appends());
return 0;
}
static double now_sec(void){
struct timespec ts; clock_gettime(CLOCK_MONOTONIC, &ts);
return (double)ts.tv_sec + (double)ts.tv_nsec * 1e-9;
}
static int run_perf(const char* dir, const char* tag, int64_t n, int64_t m, int64_t iters){
(void)dir;
rng_seed(0xBEEF7777ULL);
double t_build0 = now_sec();
build_graph(n, m);
double t_build = now_sec() - t_build0;
int64_t rb0 = engram_adj_rebuild_calls();
int64_t rw0 = engram_adj_rebuild_edge_work();
int64_t ap0 = engram_adj_incr_appends();
double mt0 = engram_adj_maint_seconds();
double t0 = now_sec();
for (int64_t it = 0; it < iters; it++){
/* One structural mutation per query — the curiosity-loop cadence that
* makes the OLD path rebuild the whole adjacency before every BFS. */
int64_t a = (int64_t)(rng_next() % (uint64_t)n);
int64_t b = (int64_t)(rng_next() % (uint64_t)n);
if (a == b) b = (b + 1) % n;
engram_connect(g_handles[a], g_handles[b], F(0.6), S("associate"));
el_val_t r = engram_activate_json(S(Q1), (el_val_t)2);
(void)r;
}
double elapsed = now_sec() - t0;
double maint = engram_adj_maint_seconds() - mt0;
printf("[perf-%s] flag=%d nodes=%lld edges=%lld iters=%lld build=%.3fs "
"loop=%.3fs per_query=%.3fms adj_maint=%.4fs adj_maint_per_query=%.4fms | "
"rebuilds=%lld rebuild_edge_work=%lld incr_appends=%lld\n",
tag, engram_store_enabled(),
(long long)(int64_t)engram_node_count(), (long long)(int64_t)engram_edge_count(),
(long long)iters, t_build, elapsed, (elapsed / (double)iters) * 1e3,
maint, (maint / (double)iters) * 1e3,
(long long)(engram_adj_rebuild_calls() - rb0),
(long long)(engram_adj_rebuild_edge_work() - rw0),
(long long)(engram_adj_incr_appends() - ap0));
return 0;
}
int main(int argc, char** argv){
if (argc < 3){ fprintf(stderr, "usage: %s <parity-off|parity-on|perf> ...\n", argv[0]); return 2; }
const char* mode = argv[1];
if (!strcmp(mode, "parity-off")){
/* flag-off, rebuild path = today's scan behavior (the baseline). */
if (engram_store_enabled()){ fprintf(stderr, "parity-off requires ENGRAM_STORE unset\n"); return 2; }
return run_parity(argv[2], "off", 0);
}
if (!strcmp(mode, "parity-on-rebuild")){
/* flag-on, but force the O(E) rebuild before each activation. */
if (!engram_store_enabled()){ fprintf(stderr, "parity-on-rebuild requires ENGRAM_STORE=1\n"); return 2; }
return run_parity(argv[2], "onrb", 1);
}
if (!strcmp(mode, "parity-on-incr")){
/* flag-on, M7 incremental index (the code path under test). */
if (!engram_store_enabled()){ fprintf(stderr, "parity-on-incr requires ENGRAM_STORE=1\n"); return 2; }
return run_parity(argv[2], "onincr", 0);
}
if (!strcmp(mode, "perf")){
/* perf <off|on> <dir> <nodes> <edges> <iters> */
if (argc < 7){ fprintf(stderr, "usage: %s perf <off|on> <dir> <nodes> <edges> <iters>\n", argv[0]); return 2; }
const char* tag = argv[2];
int64_t n = strtoll(argv[4], NULL, 10);
int64_t m = strtoll(argv[5], NULL, 10);
int64_t iters = strtoll(argv[6], NULL, 10);
return run_perf(argv[3], tag, n, m, iters);
}
fprintf(stderr, "unknown mode %s\n", mode);
return 2;
}
+255
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/* Closed-form unit tests for the REASONING layer (engram_reason.c). All inputs are
* hand-built synthetic descriptors whose answers are known in closed form. Every
* reasoning MODE is proven, not declared. ASan/UBSan target. */
#include "engram_reason.h"
#include <stdio.h>
#include <stdlib.h>
#include <string.h>
#include <math.h>
static int failures = 0, checks = 0;
static void ok(const char* what, int cond) {
checks++;
if (!cond) { failures++; printf(" FAIL: %s\n", what); }
else printf(" ok: %s\n", what);
}
static void approx(const char* what, double got, double exp, double tol) {
ok(what, fabs(got - exp) <= tol);
if (fabs(got - exp) > tol) printf(" got=%.9g exp=%.9g\n", got, exp);
}
/* ── descriptor builders (mirror scratchpad/test_geo_ops.c) ─────────────────── */
static float* vec(const double* v, int dim) {
float* f = malloc((size_t)dim * sizeof(float));
for (int i = 0; i < dim; i++) f[i] = (float)v[i];
return f;
}
static GeoDescriptor* mk(int dim, const double* centroid,
int n_axes, const double* axis_flat, const double* extents,
int n_members, const char** ids, double total_var) {
GeoDescriptor* g = calloc(1, sizeof(GeoDescriptor));
g->dim = dim;
g->centroid = centroid ? vec(centroid, dim) : NULL;
g->global_mean = NULL;
g->n_axes = n_axes;
g->axes = n_axes ? calloc((size_t)n_axes, sizeof(GeoAxis)) : NULL;
double tr = 0;
for (int k = 0; k < n_axes; k++) {
g->axes[k].axis = vec(&axis_flat[(size_t)k * dim], dim);
g->axes[k].extent = extents[k];
tr += extents[k] * extents[k];
}
g->total_variance = (total_var >= 0) ? total_var : tr;
g->radius = sqrt(g->total_variance > 0 ? g->total_variance : 0);
g->n_members = n_members; g->n_embedded = n_members;
g->members = n_members ? calloc((size_t)n_members, sizeof(GeoMember)) : NULL;
for (int i = 0; i < n_members; i++) {
g->members[i].id = strdup(ids[i]);
g->members[i].membership = 1.0;
g->members[i].centrality = (double)(n_members - i);
g->members[i].embedded = 1;
}
g->hub_id = n_members ? strdup(ids[0]) : strdup("");
g->k_core = 1; g->co_registration = 0.0; g->n_edges = 0; g->edges = NULL;
return g;
}
int main(void) {
printf("== REASONING layer unit tests ==\n");
/* ══════════════════ ANALOGY — recover an affine A→B, apply to C ══════════ */
/* A→B is a +90° rotation in the e0-e1 plane ((x,y)→(-y,x)) plus a +5 shift in e2.
* A frame = (e0,e1); B frame = rotated (e1,-e0); cB = R·cA + t. Predict D from C. */
{
int dim = 4;
double cA[4] = {1,0,0,0};
double cB[4] = {0,1,5,0}; /* R·(1,0,0,0)=(0,1,0,0) + (0,0,5,0) */
double cC[4] = {2,0,0,0};
double axA[8] = {1,0,0,0, 0,1,0,0}; double exA[2] = {1,1};
double axB[8] = {0,1,0,0, -1,0,0,0}; double exB[2] = {1,1}; /* R·e0, R·e1 */
double axC[8] = {1,0,0,0, 0,1,0,0}; double exC[2] = {1,1};
const char* idA[1] = {"A"}, *idB[1] = {"B"}, *idC[1] = {"C"};
GeoDescriptor* A = mk(dim, cA, 2, axA, exA, 1, idA, -1);
GeoDescriptor* B = mk(dim, cB, 2, axB, exB, 1, idB, -1);
GeoDescriptor* C = mk(dim, cC, 2, axC, exC, 1, idC, -1);
/* candidates: the true D + two distractors. true D = R·cC + t = (0,2,5,0). */
double d_true[4] = {0,2,5,0}, d_far1[4] = {9,9,9,9}, d_far2[4] = {0,0,0,0};
const char* idD[1] = {"Dt"}, *idF1[1] = {"F1"}, *idF2[1] = {"F2"};
GeoDescriptor* Dt = mk(dim, d_true, 0, NULL, NULL, 1, idD, 0.0);
GeoDescriptor* F1 = mk(dim, d_far1, 0, NULL, NULL, 1, idF1, 0.0);
GeoDescriptor* F2 = mk(dim, d_far2, 0, NULL, NULL, 1, idF2, 0.0);
const GeoDescriptor* cand[3] = {F1, Dt, F2}; /* true one at index 1 */
GeoAnalogyResult res;
int rc = engram_reason_analogy(A, B, C, cand, 3, &res);
ok("analogy returns 0", rc == 0);
printf("[analogy] residual=%.6f mapped=(%.4f,%.4f,%.4f,%.4f) best=%d bd=%.5f\n",
res.analogy_residual, res.mapped_point[0], res.mapped_point[1],
res.mapped_point[2], res.mapped_point[3], res.best, res.best_distance);
approx("procrustes residual ~0", res.analogy_residual, 0.0, 1e-4);
approx("mapped.x=0", res.mapped_point[0], 0.0, 1e-4);
approx("mapped.y=2", res.mapped_point[1], 2.0, 1e-4);
approx("mapped.z(e2)=5", res.mapped_point[2], 5.0, 1e-4);
ok("nearest candidate = true D (idx 1)", res.best == 1);
approx("best distance ~0", res.best_distance, 0.0, 1e-3);
engram_reason_analogy_free(&res);
engram_geo_free(A); engram_geo_free(B); engram_geo_free(C);
engram_geo_free(Dt); engram_geo_free(F1); engram_geo_free(F2);
}
/* ══════════════════ INDUCTION — recover a shared subspace + membership ═══ */
/* 3 examples all spread over span(e0,e1) (ext 1 & 0.8), each with a small
* idiosyncratic axis (e2 or e3, ext 0.2). Centroids all 0. The induced rule's
* top-2 axes must lie in span(e0,e1); a held-out in-plane point fits, an
* off-subspace point does not. */
{
int dim = 4;
double c0[4] = {0,0,0,0};
double axsh[8] = {1,0,0,0, 0,1,0,0}; double exsh[2] = {1.0, 0.8};
double ax1[12] = {1,0,0,0, 0,1,0,0, 0,0,1,0}; double ex1[3] = {1.0,0.8,0.2}; /* +e2 */
double ax2[12] = {1,0,0,0, 0,1,0,0, 0,0,0,1}; double ex2[3] = {1.0,0.8,0.2}; /* +e3 */
const char* i1[2] = {"e1a","e1b"}, *i2[2] = {"e2a","e2b"}, *i3[2] = {"e3a","e3b"};
GeoDescriptor* E1 = mk(dim, c0, 3, ax1, ex1, 2, i1, -1);
GeoDescriptor* E2 = mk(dim, c0, 3, ax2, ex2, 2, i2, -1);
GeoDescriptor* E3 = mk(dim, c0, 2, axsh, exsh, 2, i3, -1);
const GeoDescriptor* ex[3] = {E1, E2, E3};
GeoInduction ind;
int rc = engram_reason_induce(ex, 3, 8, 1.0, &ind);
ok("induce returns 0", rc == 0);
printf("[induction] rule n_axes=%d ext0=%.4f ext1=%.4f\n",
ind.rule->n_axes, ind.rule->n_axes > 0 ? ind.rule->axes[0].extent : 0,
ind.rule->n_axes > 1 ? ind.rule->axes[1].extent : 0);
/* top-2 axes lie in span(e0,e1): their e2,e3 components ~0. */
int inplane = 1;
for (int k = 0; k < 2 && k < ind.rule->n_axes; k++) {
const float* a = ind.rule->axes[k].axis;
printf(" axis%d=(%.3f,%.3f,%.3f,%.3f) ext=%.4f\n", k, a[0],a[1],a[2],a[3], ind.rule->axes[k].extent);
if (fabs(a[2]) > 0.06 || fabs(a[3]) > 0.06) inplane = 0;
}
ok("induced top-2 axes lie in shared span(e0,e1)", inplane);
approx("dominant extent ~1.0", ind.rule->axes[0].extent, 1.0, 0.06);
approx("second extent ~0.8", ind.rule->axes[1].extent, 0.8, 0.06);
/* membership: in-plane near-centroid positive fits; off-subspace negative doesn't. */
float xpos[4] = {0.3f, -0.2f, 0, 0};
float xneg[4] = {0, 0, 3.0f, 0}; /* large along e2 — outside the rule */
float xfar[4] = {5.0f, 0, 0, 0}; /* in-plane but far — Mahalanobis blows up */
double mp = engram_reason_membership(&ind, xpos);
double mn = engram_reason_membership(&ind, xneg);
double mf = engram_reason_membership(&ind, xfar);
printf("[induction] membership pos=%.4f neg=%.4f far=%.4f\n", mp, mn, mf);
ok("held-out positive fits (>0.5)", mp > 0.5);
ok("off-subspace negative rejected (<0.3)", mn < 0.3);
ok("in-plane-but-far rejected (<0.3)", mf < 0.3);
ok("positive fits far better than negative", mp > mn + 0.4);
engram_reason_induction_free(&ind);
engram_geo_free(E1); engram_geo_free(E2); engram_geo_free(E3);
}
/* ══════════════════ ABDUCTION — pick the best-explaining structure ═══════ */
/* obs planted near H1's centroid among 3 candidate structures. */
{
int dim = 4;
double h0[4] = {0,0,0,0}, h1[4] = {5,0,0,0}, h2[4] = {0,5,0,0};
double ax[8] = {1,0,0,0, 0,1,0,0}; double ex[2] = {1,1};
const char* n0[1] = {"H0"}, *n1[1] = {"H1"}, *n2[1] = {"H2"};
GeoDescriptor* H0 = mk(dim, h0, 2, ax, ex, 1, n0, -1);
GeoDescriptor* H1 = mk(dim, h1, 2, ax, ex, 1, n1, -1);
GeoDescriptor* H2 = mk(dim, h2, 2, ax, ex, 1, n2, -1);
const GeoDescriptor* H[3] = {H0, H1, H2};
float obs[4] = {5.2f, 0.1f, 0, 0}; /* sits inside H1 */
GeoAbduction ab;
int rc = engram_reason_abduce(obs, dim, H, 3, 1.0, &ab);
ok("abduce returns 0", rc == 0);
printf("[abduction] best=%d best_score=%.4f rank=[%d,%d,%d] d=[%.3f,%.3f,%.3f]\n",
ab.best, ab.best_score, ab.rank[0], ab.rank[1], ab.rank[2],
ab.distances[0], ab.distances[1], ab.distances[2]);
ok("best explanation = H1", ab.best == 1);
ok("rank[0] = H1", ab.rank[0] == 1);
ok("H1 has smallest distance", ab.distances[1] < ab.distances[0] && ab.distances[1] < ab.distances[2]);
engram_reason_abduction_free(&ab);
engram_geo_free(H0); engram_geo_free(H1); engram_geo_free(H2);
}
/* ══════════════════ CAUSAL — direction + confounder flag ═════════════════ */
/* Chain A→B→C along e0 (temporal 1<2<3). Confounder Z (e1) injects into A and
* drives D (t=4). AD correlate only via Z ⇒ must be flagged CONFOUNDED. */
{
int dim = 4;
double cA[4] = {1,1,0,0}; /* e0 (chain) + e1 (confounder leak) */
double cB[4] = {1,0,0,0}; /* e0 */
double cC[4] = {2,0,0,0}; /* e0 */
double cD[4] = {0,1,0,0}; /* e1 only — driven by Z */
double cZ[4] = {0,1,0,0}; /* confounder centroid */
double axZ[4] = {0,1,0,0}; double exZ[1] = {1}; /* Z's subspace = e1 */
const char* idA[1]={"A"},*idB[1]={"B"},*idC[1]={"C"},*idD[1]={"D"},*idZ[1]={"Z"};
GeoDescriptor* A = mk(dim, cA, 0, NULL, NULL, 1, idA, 0.0);
GeoDescriptor* B = mk(dim, cB, 0, NULL, NULL, 1, idB, 0.0);
GeoDescriptor* C = mk(dim, cC, 0, NULL, NULL, 1, idC, 0.0);
GeoDescriptor* D = mk(dim, cD, 0, NULL, NULL, 1, idD, 0.0);
GeoDescriptor* Z = mk(dim, cZ, 1, axZ, exZ, 1, idZ, -1);
const GeoDescriptor* conf[1] = {Z};
GeoCausal ab, bc, ad, bd;
engram_reason_causal(A, B, conf, 1, /*t*/1, 2, 0.5, &ab);
engram_reason_causal(B, C, conf, 1, 2, 3, 0.5, &bc);
engram_reason_causal(A, D, conf, 1, 1, 4, 0.5, &ad);
engram_reason_causal(B, D, conf, 1, 2, 4, 0.5, &bd);
printf("[causal] A->B: raw=%.3f ctrl=%.3f dir=%d verdict=%d strength=%.3f\n",
ab.assoc_raw, ab.assoc_controlled, ab.temporal_dir, ab.verdict, ab.strength);
printf("[causal] B->C: raw=%.3f ctrl=%.3f dir=%d verdict=%d\n", bc.assoc_raw, bc.assoc_controlled, bc.temporal_dir, bc.verdict);
printf("[causal] A--D: raw=%.3f ctrl=%.3f dir=%d verdict=%d confounded=%d\n",
ad.assoc_raw, ad.assoc_controlled, ad.temporal_dir, ad.verdict, ad.confounded);
printf("[causal] B--D: raw=%.3f verdict=%d\n", bd.assoc_raw, bd.verdict);
ok("A->B DIRECTED", ab.verdict == GEO_CAUSAL_DIRECTED);
ok("A->B direction A precedes B", ab.temporal_dir == 1);
ok("A->B association survives control (ctrl high)", ab.assoc_controlled > 0.6);
ok("B->C DIRECTED", bc.verdict == GEO_CAUSAL_DIRECTED);
ok("A--D CONFOUNDED (flagged)", ad.verdict == GEO_CAUSAL_CONFOUNDED && ad.confounded == 1);
ok("A--D raw correlated but control kills it", ad.assoc_raw > 0.6 && ad.assoc_controlled < 0.2);
ok("B--D NONE (no association at all)", bd.verdict == GEO_CAUSAL_NONE);
engram_geo_free(A); engram_geo_free(B); engram_geo_free(C); engram_geo_free(D); engram_geo_free(Z);
}
/* ══════════════════ PLANNING — geodesic path along a curved manifold ═════ */
/* 6 neighborhoods on a semicircle (radius 10). Consecutive chord ~6.18,
* skip-one ~11.76, endpoints ~20. neighbor_radius=7 admits only consecutive
* hops ⇒ the plan must traverse the whole arc 0→1→2→3→4→5. */
{
int dim = 4; int N = 6; double R = 10.0;
GeoDescriptor* nodes[6];
char nm[6][8];
for (int k = 0; k < N; k++) {
double th = M_PI * (double)k / (double)(N - 1);
double c[4] = { R * cos(th), R * sin(th), 0, 0 };
snprintf(nm[k], sizeof nm[k], "n%d", k);
const char* id[1] = { nm[k] };
nodes[k] = mk(dim, c, 0, NULL, NULL, 1, id, 0.0);
}
const GeoDescriptor* cn[6];
for (int k = 0; k < N; k++) cn[k] = nodes[k];
GeoPlan plan;
int rc = engram_reason_plan(cn, N, 0, 5, 7.0, 0, &plan);
ok("plan returns 0", rc == 0);
printf("[planning] reached=%d len=%d cost=%.4f path=[", plan.reached, plan.path_len, plan.total_cost);
for (int i = 0; i < plan.path_len; i++) printf("%s%d", i ? "," : "", plan.path[i]);
printf("]\n");
ok("goal reached", plan.reached == 1);
ok("path length = 6 (full arc)", plan.path_len == 6);
int monotone = (plan.path_len == 6);
for (int i = 0; i < plan.path_len; i++) if (plan.path[i] != i) monotone = 0;
ok("path = 0,1,2,3,4,5 (the geodesic)", monotone);
/* arc cost ~ 5 * 6.18 = 30.9, and strictly longer than the 20-unit chord. */
approx("arc cost ~30.9", plan.total_cost, 30.9, 0.6);
ok("arc longer than straight chord (20)", plan.total_cost > 20.0);
engram_reason_plan_free(&plan);
/* negative control: radius too small to connect anything ⇒ unreachable. */
GeoPlan p2;
engram_reason_plan(cn, N, 0, 5, 1.0, 0, &p2);
ok("unreachable when radius < min edge", p2.reached == 0);
engram_reason_plan_free(&p2);
for (int k = 0; k < N; k++) engram_geo_free(nodes[k]);
}
printf("\n== %d checks, %d failures ==\n", checks, failures);
return failures ? 1 : 0;
}
+163
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/* test_scan_collision.c — regression gate for the "saved but not findable" bug.
*
* ROOT CAUSE UNDER TEST: store_scan_nodes / store_scan_edges (the boot-load
* path that populates the resident in-RAM graph — engram_store_boot ->
* eg_load_node_cb) deduplicated emitted records by their 64-bit id_hash
* (FNV-1a-64), NOT by the full id string. Two DISTINCT ids that collide under
* id_hash therefore emitted only the FIRST: the second node/edge was durably
* present in neuron.egm (store_get_node finds it), physically on a live page,
* yet was SILENTLY DROPPED from the resident load. After any store reopen it
* was unretrievable by id, absent from lexical search, and missing from the
* recent list — exactly the reported symptom.
*
* The two ids below are real FNV-1a-64 collisions (found offline via Brent's
* cycle detection over fnv1a(hex16(x))); both hash to 0x15141fdadfa24abe.
*
* Pure C. Writes ONLY under a throwaway /tmp dir. Never touches ~/.neuron.
*/
#include "../../lang/runtime/engram_store.h"
#include <stdio.h>
#include <stdlib.h>
#include <string.h>
#include <stdint.h>
#include <unistd.h>
#include <sys/stat.h>
static int g_pass = 0, g_fail = 0;
static void ok(const char* name, int cond){
printf(" [%s] %s\n", cond ? "PASS" : "FAIL", name);
if (cond) g_pass++; else g_fail++;
}
/* Confirmed FNV-1a-64 collision (distinct strings, equal id_hash). */
#define ID_A "d2c61ec7d015dc98"
#define ID_B "bf85e965a2aefbdd"
static uint64_t fnv1a(const char* s){
uint64_t h = 1469598103934665603ULL;
for (; *s; ++s){ h ^= (uint8_t)*s; h *= 1099511628211ULL; }
return h;
}
static char g_dir[512];
static void mk_dir(void){
snprintf(g_dir, sizeof g_dir, "/tmp/engram-scancol-%d", (int)getpid());
mkdir(g_dir, 0700);
}
/* ── scan collectors: record which ids the boot-load scan actually emits ── */
typedef struct { const char* want[8]; int seen[8]; int nwant; int total; } Collect;
static void node_cb(const StoreNode* n, void* ctx){
Collect* c = ctx; c->total++;
for (int i=0;i<c->nwant;i++) if (n->id && strcmp(n->id, c->want[i])==0) c->seen[i]=1;
}
static void edge_cb(const StoreEdge* e, void* ctx){
Collect* c = ctx; c->total++;
for (int i=0;i<c->nwant;i++) if (e->id && strcmp(e->id, c->want[i])==0) c->seen[i]=1;
}
static void mk_node(StoreNode* n, const char* id, const char* content){
memset(n, 0, sizeof *n);
n->id = strdup(id);
n->content = strdup(content);
n->node_type = strdup("Memory");
n->label = strdup(content);
n->tier = strdup("Working");
n->tags = strdup("");
n->metadata = strdup("{}");
n->salience = 0.5; n->importance = 0.5; n->confidence = 1.0;
n->created_at = 1700000000000LL; n->updated_at = 1700000000000LL;
n->last_activated = 1700000000000LL;
}
static void mk_edge(StoreEdge* e, const char* id, const char* from, const char* to){
memset(e, 0, sizeof *e);
e->id = strdup(id); e->from_id = strdup(from); e->to_id = strdup(to);
e->relation = strdup("assoc"); e->metadata = strdup("{}");
e->weight = 1.0; e->confidence = 1.0;
e->created_at = 1700000000000LL; e->updated_at = 1700000000000LL;
}
int main(void){
mk_dir();
printf("== scan-collision regression (saved-but-not-findable) ==\n");
printf(" id_hash(%s) = %016llx\n", ID_A, (unsigned long long)fnv1a(ID_A));
printf(" id_hash(%s) = %016llx\n", ID_B, (unsigned long long)fnv1a(ID_B));
ok("precondition: the two ids genuinely collide under id_hash",
fnv1a(ID_A) == fnv1a(ID_B) && strcmp(ID_A, ID_B) != 0);
/* ---- Control: a single node survives a full store round-trip. ---- */
{
EngramPagedStore* s = engram_open(g_dir);
StoreNode n; mk_node(&n, ID_A, "alpha distinctiveword");
store_put_node(s, &n);
engram_close(s); /* checkpoint + close */
EngramPagedStore* r = engram_open(g_dir);
StoreNode got;
ok("control: single node found by id after reopen", store_get_node(r, ID_A, &got)==1);
if (0) {} else store_node_free(&got);
Collect c = {{ID_A}, {0}, 1, 0};
store_scan_nodes(r, node_cb, &c);
ok("control: single node emitted by boot-load scan", c.seen[0]==1);
engram_close(r);
store_node_free(&n);
}
/* ---- Bug: two id-hash-colliding NODES, both durable, both must load. ---- */
{
char dir2[600]; snprintf(dir2, sizeof dir2, "%s/nodes", g_dir); mkdir(dir2, 0700);
EngramPagedStore* s = engram_open(dir2);
StoreNode a, b;
mk_node(&a, ID_A, "alpha distinctiveword-A");
mk_node(&b, ID_B, "beta distinctiveword-B");
store_put_node(s, &a);
store_put_node(s, &b);
engram_close(s);
store_node_free(&a); store_node_free(&b);
EngramPagedStore* r = engram_open(dir2);
/* Both are individually durable (store_get_node disambiguates by strcmp). */
StoreNode ga, gb;
int hit_a = store_get_node(r, ID_A, &ga); if (hit_a==1) store_node_free(&ga);
int hit_b = store_get_node(r, ID_B, &gb); if (hit_b==1) store_node_free(&gb);
ok("both colliding nodes are durably present (store_get_node)", hit_a==1 && hit_b==1);
/* THE REGRESSION: the boot-load scan must emit BOTH, not silently drop one. */
Collect c = {{ID_A, ID_B}, {0,0}, 2, 0};
store_scan_nodes(r, node_cb, &c);
printf(" scan emitted A=%d B=%d (total=%d)\n", c.seen[0], c.seen[1], c.total);
ok("boot-load scan emits node A (would be resident)", c.seen[0]==1);
ok("boot-load scan emits node B (the dropped/unretrievable one)", c.seen[1]==1);
engram_close(r);
}
/* ---- Bug: two id-hash-colliding EDGES, both must load. ---- */
{
char dir3[600]; snprintf(dir3, sizeof dir3, "%s/edges", g_dir); mkdir(dir3, 0700);
EngramPagedStore* s = engram_open(dir3);
StoreNode na, nb; mk_node(&na, "src", "s"); mk_node(&nb, "dst", "d");
store_put_node(s, &na); store_put_node(s, &nb);
StoreEdge ea, eb;
mk_edge(&ea, ID_A, "src", "dst");
mk_edge(&eb, ID_B, "src", "dst");
store_put_edge(s, &ea);
store_put_edge(s, &eb);
engram_close(s);
store_node_free(&na); store_node_free(&nb);
store_edge_free(&ea); store_edge_free(&eb);
EngramPagedStore* r = engram_open(dir3);
Collect c = {{ID_A, ID_B}, {0,0}, 2, 0};
store_scan_edges(r, edge_cb, &c);
printf(" scan emitted edgeA=%d edgeB=%d\n", c.seen[0], c.seen[1]);
ok("boot-load scan emits edge A", c.seen[0]==1);
ok("boot-load scan emits edge B (the dropped one)", c.seen[1]==1);
engram_close(r);
}
printf("\n %d passed, %d failed\n", g_pass, g_fail);
/* cleanup */
char cmd[600]; snprintf(cmd, sizeof cmd, "rm -rf %s", g_dir); if (system(cmd)){}
return g_fail ? 1 : 0;
}
+439
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/* test_store.c — M1 gate for the engram paged store (engram_store.{c,h}).
*
* Pure C. Build: gcc -O2 test_store.c ../../lang/runtime/engram_store.c -o test_store
* Writes ONLY under a throwaway /tmp dir. Never touches ~/.neuron or live ports.
*
* Covers §7 M1 gates: round-trip (5k nodes / 20k edges, all fields, emb bit-exact,
* hebb, >page content), TLV forward-compat, overflow chains, B+-tree indexes
* across splits, free-list reuse, and corruption/superblock recovery.
*/
#include "../../lang/runtime/engram_store.h"
#include <stdio.h>
#include <stdlib.h>
#include <string.h>
#include <stdint.h>
#include <unistd.h>
#include <fcntl.h>
#include <sys/stat.h>
static int g_pass = 0, g_fail = 0;
static void ok(const char* name, int cond){
printf(" [%s] %s\n", cond ? "PASS" : "FAIL", name);
if (cond) g_pass++; else g_fail++;
}
static char g_dir[512];
static void mk_dir(void){
snprintf(g_dir, sizeof g_dir, "/tmp/engram-store-test-%d", (int)getpid());
mkdir(g_dir, 0700);
}
static void path_in(char* out, size_t cap, const char* name){
snprintf(out, cap, "%s/%s", g_dir, name);
}
static long file_size(const char* p){ struct stat st; return stat(p,&st)==0 ? (long)st.st_size : -1; }
/* ── deterministic RNG so oracle nodes/edges regenerate bit-exact ─────────── */
static uint64_t xs(uint64_t* s){ uint64_t x=*s; x^=x<<13; x^=x>>7; x^=x<<17; *s=x; return x; }
static uint64_t node_seed(int i){ return 0x9E3779B97F4A7C15ULL ^ ((uint64_t)(i+1)*0xD1B54A32D192ED03ULL); }
static uint64_t edge_seed(int i){ return 0xC2B2AE3D27D4EB4FULL ^ ((uint64_t)(i+1)*0x165667B19E3779F9ULL); }
static char* rnd_str(uint64_t* st, size_t len){
char* s = (char*)malloc(len + 1);
for (size_t i=0;i<len;i++) s[i] = (char)(33 + (xs(st) % 94)); /* printable, no NUL */
s[len] = 0; return s;
}
/* NODE_COUNT nodes; a slice have >page content to force overflow chains. */
#define NODE_COUNT 5000
#define EDGE_COUNT 20000
#define EMB_DIM 768
static void gen_node(int i, StoreNode* n){
memset(n, 0, sizeof *n);
uint64_t st = node_seed(i);
char id[32]; snprintf(id, sizeof id, "node-%d", i);
n->id = strdup(id);
size_t clen = (i % 500 == 0) ? (size_t)(17000 + (xs(&st) % 6000)) : (size_t)(xs(&st) % 300);
n->content = rnd_str(&st, clen);
n->node_type = rnd_str(&st, 4 + (xs(&st) % 8));
n->label = (i % 2) ? rnd_str(&st, 3 + (xs(&st) % 10)) : NULL;
n->tier = rnd_str(&st, 4 + (xs(&st) % 6));
n->tags = rnd_str(&st, xs(&st) % 40);
n->metadata = (i % 3) ? rnd_str(&st, xs(&st) % 60) : NULL;
n->salience = (double)(xs(&st) % 1000000) / 997.0;
n->importance = (double)(xs(&st) % 1000000) / 131.0;
n->confidence = (double)(xs(&st) % 1000000) / 733.0;
n->temporal_decay_rate = (double)(xs(&st) % 1000000) / 101.0;
n->activation_count = (int64_t)(xs(&st) % 100000);
n->last_activated = (int64_t)xs(&st);
n->created_at = (int64_t)(1600000000000LL + i);
n->updated_at = (int64_t)xs(&st);
n->background_activation = (double)(xs(&st) % 1000000) / 17.0;
n->working_memory_weight = (double)(xs(&st) % 1000000) / 29.0;
n->suppression_count = (int32_t)(xs(&st) % 50);
n->layer_id = (uint32_t)(xs(&st) % 5);
for (int k=0;k<STORE_BLL_K;k++) n->access_ts[k] = (int64_t)xs(&st);
n->access_head = (int32_t)(xs(&st) % STORE_BLL_K);
n->access_filled = (int32_t)(xs(&st) % (STORE_BLL_K + 1));
n->wm_anchor = (double)(xs(&st) % 1000000) / 3.0;
n->emb = (float*)malloc(EMB_DIM * sizeof(float));
for (int k=0;k<EMB_DIM;k++){ uint32_t u=(uint32_t)xs(&st); memcpy(&n->emb[k], &u, 4); }
n->emb_dim = EMB_DIM;
}
static void gen_edge(int i, StoreEdge* e){
memset(e, 0, sizeof *e);
uint64_t st = edge_seed(i);
char id[32], from[32], to[32];
snprintf(id, sizeof id, "edge-%d", i);
snprintf(from, sizeof from, "node-%d", (int)(xs(&st) % NODE_COUNT));
snprintf(to, sizeof to, "node-%d", (int)(xs(&st) % NODE_COUNT));
e->id = strdup(id); e->from_id = strdup(from); e->to_id = strdup(to);
e->relation = rnd_str(&st, 3 + (xs(&st) % 12));
e->metadata = (i % 4) ? rnd_str(&st, xs(&st) % 40) : NULL;
e->weight = (double)(xs(&st) % 1000000) / 111.0;
e->hebb = (double)(xs(&st) % 1000000) / 1000000.0; /* the learned field */
e->confidence = (double)(xs(&st) % 1000000) / 777.0;
e->created_at = (int64_t)(1600000000000LL + i);
e->updated_at = (int64_t)xs(&st);
e->last_fired = (int64_t)xs(&st);
e->inhibitory = (int32_t)(xs(&st) % 2);
e->layer_id = (uint32_t)(xs(&st) % 5);
}
static int streq(const char* a, const char* b){
if (!a && !b) return 1;
if (!a || !b) return 0;
return strcmp(a,b)==0;
}
static int cmp_node(const StoreNode* a, const StoreNode* b){
if (!streq(a->id,b->id) || !streq(a->content,b->content) ||
!streq(a->node_type,b->node_type) || !streq(a->label,b->label) ||
!streq(a->tier,b->tier) || !streq(a->tags,b->tags) ||
!streq(a->metadata,b->metadata)) return 0;
if (a->salience!=b->salience || a->importance!=b->importance ||
a->confidence!=b->confidence || a->temporal_decay_rate!=b->temporal_decay_rate ||
a->activation_count!=b->activation_count || a->last_activated!=b->last_activated ||
a->created_at!=b->created_at || a->updated_at!=b->updated_at ||
a->background_activation!=b->background_activation ||
a->working_memory_weight!=b->working_memory_weight ||
a->suppression_count!=b->suppression_count || a->layer_id!=b->layer_id ||
a->access_head!=b->access_head || a->access_filled!=b->access_filled ||
a->wm_anchor!=b->wm_anchor || a->emb_dim!=b->emb_dim) return 0;
for (int k=0;k<STORE_BLL_K;k++) if (a->access_ts[k]!=b->access_ts[k]) return 0;
if ((a->emb==NULL) != (b->emb==NULL)) return 0;
if (a->emb && memcmp(a->emb, b->emb, (size_t)a->emb_dim*4)!=0) return 0;
return 1;
}
static int cmp_edge(const StoreEdge* a, const StoreEdge* b){
if (!streq(a->id,b->id) || !streq(a->from_id,b->from_id) || !streq(a->to_id,b->to_id) ||
!streq(a->relation,b->relation) || !streq(a->metadata,b->metadata)) return 0;
if (a->weight!=b->weight || a->hebb!=b->hebb || a->confidence!=b->confidence ||
a->created_at!=b->created_at || a->updated_at!=b->updated_at ||
a->last_fired!=b->last_fired || a->inhibitory!=b->inhibitory ||
a->layer_id!=b->layer_id) return 0;
return 1;
}
static void free_node_fields(StoreNode* n){
free(n->id); free(n->content); free(n->node_type); free(n->label);
free(n->tier); free(n->tags); free(n->metadata); free(n->emb); free(n->unknown);
}
static void free_edge_fields(StoreEdge* e){
free(e->id); free(e->from_id); free(e->to_id); free(e->relation); free(e->metadata); free(e->unknown);
}
/* Flip one byte in the store file at (page*PAGE_SIZE + off). */
static void flip_byte(const char* path, uint64_t page, size_t off){
int fd = open(path, O_RDWR);
uint8_t b; off_t at = (off_t)page*STORE_PAGE_SIZE + off;
pread(fd, &b, 1, at); b ^= 0xFF; pwrite(fd, &b, 1, at); close(fd);
}
/* ════════════════════════════════════════════════════════════════════════ */
static void test_roundtrip(void){
printf("\n== round-trip: %d nodes + %d edges, all fields, emb bit-exact ==\n", NODE_COUNT, EDGE_COUNT);
char path[600]; path_in(path, sizeof path, "roundtrip.store");
unlink(path);
EngramPagedStore* s = store_create(path);
ok("store_create", s != NULL);
if (!s) return;
for (int i=0;i<NODE_COUNT;i++){ StoreNode n; gen_node(i,&n);
if (store_put_node(s,&n)!=0){ ok("put_node", 0); free_node_fields(&n); store_close(s); return; }
free_node_fields(&n); }
for (int i=0;i<EDGE_COUNT;i++){ StoreEdge e; gen_edge(i,&e);
if (store_put_edge(s,&e)!=0){ ok("put_edge", 0); free_edge_fields(&e); store_close(s); return; }
free_edge_fields(&e); }
ok("wrote all nodes+edges", 1);
store_close(s);
long sz = file_size(path);
printf(" store file size: %ld bytes (%.2f MB) for %d nodes / %d edges\n",
sz, sz/1048576.0, NODE_COUNT, EDGE_COUNT);
s = store_open(path);
ok("store_open (reopen)", s != NULL);
if (!s) return;
int nbad = 0;
for (int i=0;i<NODE_COUNT;i++){
StoreNode want; gen_node(i,&want);
StoreNode got; int r = store_get_node(s, want.id, &got);
if (r!=1 || !cmp_node(&want,&got) || got.unknown_len!=0) nbad++;
if (r==1) store_node_free(&got);
free_node_fields(&want);
}
ok("all 5000 nodes read back bit-exact (incl emb, all fields)", nbad==0);
if (nbad) printf(" %d node mismatches\n", nbad);
int ebad = 0;
for (int i=0;i<EDGE_COUNT;i++){
StoreEdge want; gen_edge(i,&want);
StoreEdge* got; size_t gn;
int found = 0;
if (store_get_edges_from(s, want.from_id, &got, &gn)==0){
for (size_t j=0;j<gn;j++) if (streq(got[j].id, want.id)){ if (cmp_edge(&want,&got[j])) found=1; break; }
store_edges_free(got, gn);
}
if (!found) ebad++;
free_edge_fields(&want);
}
ok("all 20000 edges read back via adjacency, all fields incl hebb", ebad==0);
if (ebad) printf(" %d edge mismatches\n", ebad);
ok("store_check crc clean after round-trip", store_check(s, STORE_CHECK_CRC)==0);
store_close(s);
}
static void test_forward_compat(void){
printf("\n== TLV forward-compat: omit field defaults; unknown tag preserved ==\n");
char path[600]; path_in(path, sizeof path, "fwd.store");
unlink(path);
EngramPagedStore* s = store_create(path);
/* Writer OMITS several fields (metadata, label, emb) → reader must default. */
StoreNode a; memset(&a,0,sizeof a);
a.id = strdup("omit-1"); a.content = strdup("has content"); a.tier = strdup("core");
a.salience = 0.5; /* metadata/label NULL, emb NULL */
store_put_node(s, &a); free(a.id); free(a.content); free(a.tier);
StoreNode g; int r = store_get_node(s, "omit-1", &g);
ok("omitted string fields default to NULL", r==1 && g.metadata==NULL && g.label==NULL);
ok("omitted emb defaults to NULL / emb_dim 0", r==1 && g.emb==NULL && g.emb_dim==0);
ok("present fields intact", r==1 && streq(g.content,"has content") && g.salience==0.5);
if (r==1) store_node_free(&g);
/* Writer includes an UNKNOWN tag (simulating a newer writer / field the
* reader does not model) via the `unknown` passthrough. Reader (which also
* models known fields A,B,C) must preserve it verbatim. */
uint8_t unk[64];
unk[0] = 200; /* a tag this build has no case for */
/* [u8 tag][u32 len][bytes] */
unk[1]=8; unk[2]=0; unk[3]=0; unk[4]=0;
for (int i=0;i<8;i++) unk[5+i] = (uint8_t)(0xA0 + i);
StoreNode b; memset(&b,0,sizeof b);
b.id = strdup("unk-1"); b.content = strdup("known field B"); b.confidence = 0.9; /* known field C-ish */
b.unknown = unk; b.unknown_len = 5 + 8;
store_put_node(s, &b); free(b.id); free(b.content);
StoreNode g2; int r2 = store_get_node(s, "unk-1", &g2);
int unk_ok = r2==1 && g2.unknown_len==(5+8) && memcmp(g2.unknown, unk, 5+8)==0;
ok("unknown tag preserved verbatim on read", unk_ok);
ok("known fields still read while unknown preserved", r2==1 && streq(g2.content,"known field B") && g2.confidence==0.9);
if (r2==1) store_node_free(&g2);
store_close(s);
}
static void test_overflow(void){
printf("\n== overflow: 100KB content node + emb via overflow chain ==\n");
char path[600]; path_in(path, sizeof path, "ovf.store");
unlink(path);
EngramPagedStore* s = store_create(path);
size_t big = 100*1024;
StoreNode n; memset(&n,0,sizeof n);
n.id = strdup("big-1");
n.content = (char*)malloc(big+1);
for (size_t i=0;i<big;i++) n.content[i] = (char)(33 + (i % 94));
n.content[big] = 0;
n.tier = strdup("episodic");
n.emb = (float*)malloc(EMB_DIM*sizeof(float));
for (int k=0;k<EMB_DIM;k++){ float f = (float)(k*0.5 - 100.0); n.emb[k]=f; }
n.emb_dim = EMB_DIM;
ok("put 100KB+emb node", store_put_node(s,&n)==0);
store_close(s);
s = store_open(path);
StoreNode g; int r = store_get_node(s, "big-1", &g);
ok("reopen + read big node", r==1);
ok("100KB content byte-exact via overflow", r==1 && strlen(g.content)==big && memcmp(g.content,n.content,big)==0);
ok("emb bit-exact via overflow record", r==1 && g.emb_dim==EMB_DIM && memcmp(g.emb,n.emb,EMB_DIM*4)==0);
if (r==1) store_node_free(&g);
ok("store_check clean (overflow pages crc'd)", store_check(s, STORE_CHECK_CRC)==0);
store_close(s);
free_node_fields(&n);
}
static void test_index_splits(void){
printf("\n== B+-tree index correctness across many splits ==\n");
char path[600]; path_in(path, sizeof path, "idx.store");
unlink(path);
EngramPagedStore* s = store_create(path);
/* Tiny order forces deep leaf + internal splits with only a few hundred keys. */
store__set_btree_order(s, 4, 4);
const int N = 600;
for (int i=0;i<N;i++){
StoreNode n; memset(&n,0,sizeof n);
char id[32]; snprintf(id,sizeof id,"k-%05d", (i*37+11)%100000); /* scattered keys */
n.id = strdup(id); n.content = strdup("x"); n.tier=strdup("t"); n.salience=i;
if (store_put_node(s,&n)!=0){ ok("put",0); }
free(n.id); free(n.content); free(n.tier);
}
int miss=0;
for (int i=0;i<N;i++){
char id[32]; snprintf(id,sizeof id,"k-%05d",(i*37+11)%100000);
StoreNode g; int r = store_get_node(s, id, &g);
if (r!=1 || (int)g.salience != i) miss++;
if (r==1) store_node_free(&g);
}
ok("all keys retrievable after leaf+internal splits", miss==0);
if (miss) printf(" %d misses\n", miss);
StoreNode g; ok("absent key returns 0", store_get_node(s,"k-NOPE",&g)==0);
/* Adjacency: controlled star + chain, exact edge sets. */
for (int i=0;i<50;i++){
StoreEdge e; memset(&e,0,sizeof e);
char id[32]; snprintf(id,sizeof id,"e-%d",i);
e.id=strdup(id); e.from_id=strdup("HUB"); char tt[16]; snprintf(tt,sizeof tt,"T-%d",i); e.to_id=strdup(tt);
e.relation=strdup("r"); e.weight=1.0; e.hebb=0.1*i;
store_put_edge(s,&e); free_edge_fields(&e);
}
for (int i=0;i<7;i++){
StoreEdge e; memset(&e,0,sizeof e);
char id[32]; snprintf(id,sizeof id,"in-%d",i);
char ff[16]; snprintf(ff,sizeof ff,"S-%d",i);
e.id=strdup(id); e.from_id=strdup(ff); e.to_id=strdup("SINK");
e.relation=strdup("r"); e.weight=1.0;
store_put_edge(s,&e); free_edge_fields(&e);
}
StoreEdge* out; size_t on;
store_get_edges_from(s,"HUB",&out,&on);
ok("get_edges_from(HUB) == 50", on==50);
store_edges_free(out,on);
store_get_edges_to(s,"SINK",&out,&on);
ok("get_edges_to(SINK) == 7", on==7);
store_edges_free(out,on);
store_get_edges_to(s,"HUB",&out,&on);
ok("get_edges_to(HUB) == 0 (direction separation)", on==0);
store_edges_free(out,on);
ok("store_check clean", store_check(s, STORE_CHECK_CRC)==0);
store_close(s);
}
static void test_freelist(void){
printf("\n== free-list: tombstone reclaims pages, graph stays consistent ==\n");
char path[600]; path_in(path, sizeof path, "free.store");
unlink(path);
EngramPagedStore* s = store_create(path);
uint64_t pc0 = store_page_count(s);
const int N = 300;
for (int i=0;i<N;i++){
StoreNode n; memset(&n,0,sizeof n);
char id[32]; snprintf(id,sizeof id,"a-%d",i);
n.id=strdup(id); n.content=rnd_str(&(uint64_t){node_seed(i)}, 200); n.tier=strdup("t");
store_put_node(s,&n); free_node_fields(&n);
}
uint64_t pc1 = store_page_count(s);
uint64_t node_pages = pc1 - pc0;
ok("initial batch consumed pages", node_pages > 0);
for (int i=0;i<N;i++){ char id[32]; snprintf(id,sizeof id,"a-%d",i); store_tombstone(s,id); }
/* all old nodes gone */
int gone=1; for (int i=0;i<N;i++){ char id[32]; snprintf(id,sizeof id,"a-%d",i);
StoreNode g; if (store_get_node(s,id,&g)==1){ gone=0; store_node_free(&g); } }
ok("tombstoned nodes now absent", gone);
for (int i=0;i<N;i++){
StoreNode n; memset(&n,0,sizeof n);
char id[32]; snprintf(id,sizeof id,"b-%d",i);
n.id=strdup(id); n.content=strdup("reused"); n.tier=strdup("t"); n.salience=i;
store_put_node(s,&n); free_node_fields(&n);
}
uint64_t pc2 = store_page_count(s);
/* Reuse proven: growth for the 2nd batch is far less than a fresh alloc. */
ok("freed pages reused (no full re-growth)", pc2 < pc1 + node_pages);
printf(" pages: base=%llu after1=%llu after2=%llu (node_pages=%llu)\n",
(unsigned long long)pc0,(unsigned long long)pc1,(unsigned long long)pc2,(unsigned long long)node_pages);
int newbad=0; for (int i=0;i<N;i++){ char id[32]; snprintf(id,sizeof id,"b-%d",i);
StoreNode g; if (store_get_node(s,id,&g)!=1 || (int)g.salience!=i) newbad++; else store_node_free(&g); }
ok("new batch fully readable after reuse", newbad==0);
ok("store_check clean after reuse", store_check(s, STORE_CHECK_CRC)==0);
store_close(s);
/* survives reopen */
s = store_open(path);
int rb=0; for (int i=0;i<N;i++){ char id[32]; snprintf(id,sizeof id,"b-%d",i);
StoreNode g; if (store_get_node(s,id,&g)!=1) rb++; else store_node_free(&g); }
ok("graph consistent across reopen after reuse", rb==0);
store_close(s);
}
static void test_corruption(void){
printf("\n== corruption: crc detection + superblock mirror recovery ==\n");
char path[600]; path_in(path, sizeof path, "corrupt.store");
unlink(path);
EngramPagedStore* s = store_create(path);
for (int i=0;i<50;i++){ StoreNode n; gen_node(i,&n); store_put_node(s,&n); free_node_fields(&n); }
store_close(s);
s = store_open(path);
ok("clean store: store_check == 0", store_check(s, STORE_CHECK_CRC)==0);
store_close(s);
/* flip a byte inside a data page (page 5 is node/index data, never a SB) */
flip_byte(path, 5, 137);
s = store_open(path);
ok("store_open still succeeds (data-page corruption)", s != NULL);
int bad = store_check(s, STORE_CHECK_CRC);
ok("store_check detects corrupted page via crc", bad >= 1);
printf(" store_check reported %d corrupt page(s)\n", bad);
store_close(s);
/* fresh store, corrupt superblock 0, must recover via mirror superblock 1 */
char p2[600]; path_in(p2, sizeof p2, "sbrec.store");
unlink(p2);
s = store_create(p2);
StoreNode n; gen_node(42,&n); store_put_node(s,&n);
store_close(s);
/* trash magic + crc region of page 0 */
flip_byte(p2, 0, 0); flip_byte(p2, 0, 1); flip_byte(p2, 0, 90);
s = store_open(p2);
ok("open recovers via mirror superblock (page 1)", s != NULL);
if (s){
StoreNode g; int r = store_get_node(s, "node-42", &g);
ok("data intact after superblock recovery", r==1 && cmp_node(&n,&g));
if (r==1) store_node_free(&g);
store_close(s);
}
free_node_fields(&n);
}
int main(void){
mk_dir();
printf("engram_store M1 test harness — dir=%s\n", g_dir);
test_roundtrip();
test_forward_compat();
test_overflow();
test_index_splits();
test_freelist();
test_corruption();
printf("\n================ %d passed, %d failed ================\n", g_pass, g_fail);
return g_fail ? 1 : 0;
}
+244
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@@ -0,0 +1,244 @@
/* Closed-form unit tests for the VERIFIER layer (engram_verify.c). Every case is a
* hand-built synthetic descriptor / claim point whose verdict is known in closed
* form the checks are PROVEN, not declared. ASan/UBSan target.
*
* The headline case is CONSISTENCY's polarity check: the reassuranceaccusation
* inversion ("you never fought" "you argued") that no grammar check catches. */
#include "engram_verify.h"
#include <stdio.h>
#include <stdlib.h>
#include <string.h>
#include <math.h>
static int failures = 0, checks = 0;
static void ok(const char* what, int cond) {
checks++;
if (!cond) { failures++; printf(" FAIL: %s\n", what); }
else printf(" ok: %s\n", what);
}
static void approx(const char* what, double got, double exp, double tol) {
ok(what, fabs(got - exp) <= tol);
if (fabs(got - exp) > tol) printf(" got=%.9g exp=%.9g\n", got, exp);
}
/* ── descriptor builder (mirrors test_reason.c) ─────────────────────────────── */
static float* vec(const double* v, int dim) {
float* f = malloc((size_t)dim * sizeof(float));
for (int i = 0; i < dim; i++) f[i] = (float)v[i];
return f;
}
static GeoDescriptor* mk(int dim, const double* centroid,
int n_axes, const double* axis_flat, const double* extents,
int n_members, const char** ids, double total_var) {
GeoDescriptor* g = calloc(1, sizeof(GeoDescriptor));
g->dim = dim;
g->centroid = centroid ? vec(centroid, dim) : NULL;
g->global_mean = NULL;
g->n_axes = n_axes;
g->axes = n_axes ? calloc((size_t)n_axes, sizeof(GeoAxis)) : NULL;
double tr = 0;
for (int k = 0; k < n_axes; k++) {
g->axes[k].axis = vec(&axis_flat[(size_t)k * dim], dim);
g->axes[k].extent = extents[k];
tr += extents[k] * extents[k];
}
g->total_variance = (total_var >= 0) ? total_var : tr;
g->radius = sqrt(g->total_variance > 0 ? g->total_variance : 0);
g->n_members = n_members; g->n_embedded = n_members;
g->members = n_members ? calloc((size_t)n_members, sizeof(GeoMember)) : NULL;
for (int i = 0; i < n_members; i++) {
g->members[i].id = strdup(ids[i]);
g->members[i].membership = 1.0;
g->members[i].centrality = (double)(n_members - i);
g->members[i].embedded = 1;
}
g->hub_id = n_members ? strdup(ids[0]) : strdup("");
g->k_core = 1; g->co_registration = 0.0; g->n_edges = 0; g->edges = NULL;
return g;
}
int main(void) {
printf("== VERIFIER layer unit tests ==\n");
/* ══════════════════ GROUNDING — supported vs floating (hallucination) ════ */
/* Two real neighborhoods: E0 at origin, E1 far along e0. A claim planted inside
* E0 is grounded; a claim floating far off-manifold (along an unmodeled axis) is
* flagged UNGROUNDED; a claim near E1 grounds to E1, not E0. */
{
int dim = 4;
double c0[4] = {0,0,0,0}, c1[4] = {10,0,0,0};
double ax[8] = {1,0,0,0, 0,1,0,0}; double ex[2] = {1,1};
const char* i0[1] = {"E0"}, *i1[1] = {"E1"};
GeoDescriptor* E0 = mk(dim, c0, 2, ax, ex, 1, i0, -1);
GeoDescriptor* E1 = mk(dim, c1, 2, ax, ex, 1, i1, -1);
const GeoDescriptor* ev[2] = {E0, E1};
/* (1) grounded claim — sits inside E0. */
float in[4] = {0.3f, -0.2f, 0, 0};
GeoGrounding g1;
int rc = engram_verify_grounding(in, dim, ev, 2, 1.0, 0.5, &g1);
ok("grounding returns 0", rc == 0);
printf("[grounding] IN score=%.4f grounded=%d best=%d dist=%.3f ortho=%.3f nearL2=%.3f\n",
g1.grounding, g1.grounded, g1.best, g1.best_distance, g1.best_ortho, g1.nearest_centroid_l2);
ok("planted-inside claim is GROUNDED", g1.grounded == 1);
ok("grounds to the nearest structure E0", g1.best == 0);
ok("grounded score high (>0.7)", g1.grounding > 0.7);
approx("off-model residual ~0 for in-distribution claim", g1.best_ortho, 0.0, 1e-4);
engram_verify_grounding_free(&g1);
/* (2) hallucinated claim — floats far along the unmodeled e2 axis. */
float out[4] = {0, 0, 50.0f, 0};
GeoGrounding g2;
engram_verify_grounding(out, dim, ev, 2, 1.0, 0.5, &g2);
printf("[grounding] OUT score=%.6f grounded=%d best=%d dist=%.3f ortho=%.3f nearL2=%.3f\n",
g2.grounding, g2.grounded, g2.best, g2.best_distance, g2.best_ortho, g2.nearest_centroid_l2);
ok("floating claim is FLAGGED (ungrounded)", g2.grounded == 0);
ok("floating claim scores near zero (<0.01)", g2.grounding < 0.01);
ok("off-model residual is large (the hallucination signal)", g2.best_ortho > 40.0);
ok("nearest real structure is far (L2>40)", g2.nearest_centroid_l2 > 40.0);
engram_verify_grounding_free(&g2);
/* (3) selection — a claim near E1 grounds to E1. */
float nearE1[4] = {9.8f, 0.1f, 0, 0};
GeoGrounding g3;
engram_verify_grounding(nearE1, dim, ev, 2, 1.0, 0.5, &g3);
printf("[grounding] E1 score=%.4f grounded=%d best=%d\n", g3.grounding, g3.grounded, g3.best);
ok("claim near E1 grounds to E1 (best=1)", g3.best == 1 && g3.grounded == 1);
engram_verify_grounding_free(&g3);
engram_geo_free(E0); engram_geo_free(E1);
}
/* ══════════════════ CONSISTENCY (a) — THE NEGATION-INVERSION CATCH ═══════ */
/* The motivating failure, geometrically. Polarity axis along e0:
* pole_pos = the AFFIRM region ("argued / fought") centroid (+5, )
* pole_neg = the NEGATE region ("never fought / at peace") centroid (5, )
* The grounded TRUTH (context) is the reassurance "you never fought" sits on
* the NEGATE side (5). The bad translation CLAIM "you argued" lands on the
* AFFIRM side (+4). Opposite sides of the negation axis INVERSION flagged
* even though "you argued" is perfectly grammatical. This is the catch. */
{
int dim = 4;
double c_pos[4] = { 5, 0, 0, 0}; /* "argued / fought" */
double c_neg[4] = {-5, 0, 0, 0}; /* "never fought / at peace"*/
double c_truth[4] = {-5, 0, 0, 0}; /* context: the reassurance */
double ax[4] = {1,0,0,0}; double ex[1] = {1};
const char* ip[1]={"pos"},*in[1]={"neg"},*it[1]={"truth"};
GeoDescriptor* POS = mk(dim, c_pos, 1, ax, ex, 1, ip, -1);
GeoDescriptor* NEG = mk(dim, c_neg, 1, ax, ex, 1, in, -1);
GeoDescriptor* CTX = mk(dim, c_truth, 1, ax, ex, 1, it, -1);
/* the plausible LIE: "you argued" — grammatical, fluent, and INVERTED. */
float lie[4] = { 4, 0, 0, 0};
GeoConsistency cl;
int rc = engram_verify_consistency(lie, dim, CTX, POS, NEG, NULL,
1.0, 0.10, 0.5, 0.0, &cl);
ok("consistency returns 0", rc == 0);
printf("[consistency] LIE verdict=%d inverted=%d claim_side=%.3f ref_side=%.3f sep=%.3f consist=%.3f\n",
cl.verdict, cl.inverted, cl.polarity_claim, cl.polarity_reference, cl.polarity_separation, cl.consistency);
ok("NEGATION INVERSION caught (inverted=1)", cl.inverted == 1);
ok("verdict = POLARITY", cl.verdict == GEO_CONSIST_POLARITY);
ok("claim sits on the AFFIRM pole (+)", cl.polarity_claim > 0);
ok("truth sits on the NEGATE pole ()", cl.polarity_reference < 0);
ok("consistency collapses to 0 on inversion", cl.consistency < 1e-9);
/* the FAITHFUL translation: "you were at peace" — same pole as the truth. */
float ok_claim[4] = {-4, 0, 0, 0};
GeoConsistency cok;
engram_verify_consistency(ok_claim, dim, CTX, POS, NEG, NULL,
1.0, 0.10, 0.5, 0.0, &cok);
printf("[consistency] TRUE verdict=%d inverted=%d claim_side=%.3f consist=%.3f\n",
cok.verdict, cok.inverted, cok.polarity_claim, cok.consistency);
ok("faithful claim NOT flagged (inverted=0)", cok.inverted == 0);
ok("faithful claim verdict OK", cok.verdict == GEO_CONSIST_OK);
ok("faithful claim consistency = 1", cok.consistency > 0.999);
/* a NEUTRAL claim near the midpoint must NOT false-trigger. */
float neutral[4] = {0.1f, 0, 0, 0}; /* |side|=0.1 < deadzone 0.5 */
GeoConsistency cn;
engram_verify_consistency(neutral, dim, CTX, POS, NEG, NULL,
1.0, 0.10, 0.5, 0.0, &cn);
printf("[consistency] NEUT verdict=%d inverted=%d claim_side=%.3f consist=%.3f\n",
cn.verdict, cn.inverted, cn.polarity_claim, cn.consistency);
ok("neutral claim inside deadzone does NOT trigger inversion", cn.inverted == 0);
engram_geo_free(POS); engram_geo_free(NEG); engram_geo_free(CTX);
}
/* ══════════════════ CONSISTENCY (b) — GEOMETRIC contradiction ════════════ */
/* A claim that sits INSIDE a forbidden region it should be far from, and a claim
* that violates a max-distance constraint to its context, are both flagged. */
{
int dim = 4;
double c_ctx[4] = {0,0,0,0};
double c_forb[4] = {0,10,0,0}; /* forbidden region, offset along e1 */
double ax[8] = {0,1,0,0, 1,0,0,0}; double ex[2] = {1,1};
const char* ic[1]={"ctx"},*ifb[1]={"forb"};
GeoDescriptor* CTX = mk(dim, c_ctx, 2, ax, ex, 1, ic, -1);
GeoDescriptor* FORB = mk(dim, c_forb, 2, ax, ex, 1, ifb, -1);
/* claim sitting inside the forbidden region → geometric contradiction. */
float inside[4] = {0, 10.1f, 0, 0};
GeoConsistency cf;
engram_verify_consistency(inside, dim, CTX, NULL, NULL, FORB,
1.0, 0.10, 0.5, 0.0, &cf);
printf("[consistency] FORB verdict=%d geo_viol=%d forb_fit=%.4f consist=%.3f\n",
cf.verdict, cf.geo_violation, cf.forbidden_fit, cf.consistency);
ok("claim inside forbidden region FLAGGED", cf.geo_violation == 1);
ok("verdict = GEOMETRIC", cf.verdict == GEO_CONSIST_GEOMETRIC);
ok("forbidden fit is high (claim really is inside)", cf.forbidden_fit > 0.5);
/* claim well clear of the forbidden region → not flagged. */
float clear[4] = {0.2f, 0.1f, 0, 0};
GeoConsistency cc;
engram_verify_consistency(clear, dim, CTX, NULL, NULL, FORB,
1.0, 0.10, 0.5, 0.0, &cc);
printf("[consistency] CLR verdict=%d geo_viol=%d forb_fit=%.4f\n",
cc.verdict, cc.geo_violation, cc.forbidden_fit);
ok("claim clear of forbidden NOT flagged", cc.geo_violation == 0 && cc.verdict == GEO_CONSIST_OK);
/* max-distance constraint: claim too far from context (off-axis, no poles). */
float far[4] = {0, 8.0f, 0, 0};
GeoConsistency cd;
engram_verify_consistency(far, dim, CTX, NULL, NULL, NULL,
1.0, 0.10, 0.5, /*max_distance*/3.0, &cd);
printf("[consistency] DIST verdict=%d geo_viol=%d ctx_dist=%.3f\n",
cd.verdict, cd.geo_violation, cd.context_distance);
ok("claim beyond max_distance FLAGGED", cd.geo_violation == 1 && cd.verdict == GEO_CONSIST_GEOMETRIC);
approx("context distance measured correctly", cd.context_distance, 8.0, 1e-4);
engram_geo_free(CTX); engram_geo_free(FORB);
}
/* ══════════════════ COMBINED — grounded but INVERTED (the full plausible lie) */
/* The most dangerous output: fluent, GROUNDED in real vocabulary, yet polarity-
* inverted. Grounding alone passes it; only consistency catches the lie. This is
* exactly why the verifier needs BOTH checks. */
{
int dim = 4;
double c_pos[4] = { 5, 0, 0, 0}, c_neg[4] = {-5, 0, 0, 0};
double ax[4] = {1,0,0,0}; double ex[1] = {2};
const char* ip[1]={"pos"},*in[1]={"neg"};
GeoDescriptor* POS = mk(dim, c_pos, 1, ax, ex, 1, ip, -1);
GeoDescriptor* NEG = mk(dim, c_neg, 1, ax, ex, 1, in, -1);
const GeoDescriptor* ev[2] = {POS, NEG};
float lie[4] = {5, 0, 0, 0}; /* "argued" — sits dead-center in the affirm region */
GeoGrounding g;
engram_verify_grounding(lie, dim, ev, 2, 1.0, 0.5, &g);
GeoConsistency c;
engram_verify_consistency(lie, dim, NEG /*truth=never fought*/, POS, NEG, NULL,
1.0, 0.10, 0.5, 0.0, &c);
printf("[combined] grounded=%d (score=%.3f) inverted=%d verdict=%d\n",
g.grounded, g.grounding, c.inverted, c.verdict);
ok("plausible lie PASSES grounding (it is real vocabulary)", g.grounded == 1);
ok("plausible lie is CAUGHT by consistency (inverted)", c.inverted == 1);
ok("=> grounding alone is insufficient; consistency is the catch",
g.grounded == 1 && c.verdict == GEO_CONSIST_POLARITY);
engram_verify_grounding_free(&g);
engram_geo_free(POS); engram_geo_free(NEG);
}
printf("\n== %d checks, %d failures ==\n", checks, failures);
return failures ? 1 : 0;
}
+312
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@@ -0,0 +1,312 @@
/* test_vindex.c — build + RUN gate for the M8 HNSW vector index.
*
* Covers: recall@10 vs brute-force oracle, brute-force-vs-index speedup,
* correctness edge cases (k>N, identical vectors, self-query, zero vector),
* determinism (seeded PRNG identical graphs), and vindex_build_from_store
* over a real engram_store on-disk file.
*
* Pure C11; links engram_vindex.c + engram_store.c; -lm. ASan/UBSan clean.
*/
#include "engram_vindex.h"
#include "engram_store.h"
#include <stdio.h>
#include <stdlib.h>
#include <string.h>
#include <math.h>
#include <stdint.h>
#include <time.h>
#include <unistd.h>
#define DIM 768
static int g_fail = 0;
/* VINDEX_QUICK=1 shrinks the two large builds so the ASan/UBSan pass (which runs
* ~5-10x slower) stays fast memory-safety is size-independent. The perf numbers
* (recall gate + speedup) come from the un-sanitized, full-size pass. */
static int g_quick = 0;
static int envint(const char* k, int dflt){ const char* s=getenv(k); return s?atoi(s):dflt; }
#define CHECK(cond, msg) do{ if(!(cond)){ printf(" FAIL: %s\n", msg); g_fail=1; } else { printf(" ok: %s\n", msg); } }while(0)
/* deterministic test PRNG (splitmix64) */
static uint64_t rng_state = 0xABCDEF0123456789ULL;
static uint64_t xrng(uint64_t* s){
uint64_t z=(*s+=0x9E3779B97F4A7C15ULL);
z=(z^(z>>30))*0xBF58476D1CE4E5B9ULL; z=(z^(z>>27))*0x94D049BB133111EBULL;
return z^(z>>31);
}
static float frand(uint64_t* s){ return (float)((xrng(s)>>11)*(1.0/9007199254740992.0)) - 0.5f; }
static double now_s(void){
struct timespec t; clock_gettime(CLOCK_MONOTONIC,&t);
return t.tv_sec + t.tv_nsec*1e-9;
}
/* fill vec[N*DIM]: mostly random, some clustered groups (center + small noise). */
static void gen_vectors(float* v, int N, uint64_t seed){
uint64_t s = seed;
int clustered = N/5; /* last fifth is clustered */
int ncenters = 20;
float* centers = (float*)malloc((size_t)ncenters*DIM*sizeof(float));
for (int c=0;c<ncenters;c++) for(int d=0;d<DIM;d++) centers[c*DIM+d]=frand(&s);
for (int i=0;i<N;i++){
if (i < N-clustered){
for (int d=0;d<DIM;d++) v[i*DIM+d]=frand(&s);
} else {
int c = (int)(xrng(&s)%ncenters);
for (int d=0;d<DIM;d++) v[i*DIM+d]=centers[c*DIM+d] + 0.05f*frand(&s);
}
}
free(centers);
}
static float cosdist(const float* a, const float* b){
double da=0,db=0,dot=0;
for(int i=0;i<DIM;i++){ da+=(double)a[i]*a[i]; db+=(double)b[i]*b[i]; dot+=(double)a[i]*b[i]; }
if (da<=0||db<=0) return 1.0f;
return (float)(1.0 - dot/(sqrt(da)*sqrt(db)));
}
/* brute-force top-k node ids into ids[k] (ascending distance). */
static void brute_topk(const float* v, int N, const float* q, int k, int* ids){
float* bd = (float*)malloc((size_t)k*sizeof(float));
for (int i=0;i<k;i++){ ids[i]=-1; bd[i]=1e30f; }
for (int i=0;i<N;i++){
float d = cosdist(q, v+(size_t)i*DIM);
if (d < bd[k-1]){
int p=k-1;
while (p>0 && bd[p-1]>d){ bd[p]=bd[p-1]; ids[p]=ids[p-1]; p--; }
bd[p]=d; ids[p]=i;
}
}
free(bd);
}
/* ── Test 1: recall@10 vs brute force + latency/recall tradeoff ────────────── */
static void test_recall(void){
int N=envint("VINDEX_N_RECALL", g_quick?1500:5000), Q=200, K=10;
printf("\n== Test 1: recall@10 vs brute force (N=%d, DIM=768) ==\n", N);
float* v = (float*)malloc((size_t)N*DIM*sizeof(float));
gen_vectors(v, N, 111);
double t0=now_s();
VIndex* ix = vindex_create(DIM, VINDEX_DEFAULT_M, VINDEX_DEFAULT_EF_CONSTRUCTION);
for (int i=0;i<N;i++) vindex_insert(ix, (uint64_t)i, v+(size_t)i*DIM);
double build_s = now_s()-t0;
printf(" build: %d vectors in %.2fs (M=%d, ef_construction=%d)\n",
N, build_s, VINDEX_DEFAULT_M, VINDEX_DEFAULT_EF_CONSTRUCTION);
/* queries: half random, half near a real vector (perturbed). */
float* qs = (float*)malloc((size_t)Q*DIM*sizeof(float));
uint64_t s=999;
for (int i=0;i<Q;i++){
if (i<Q/2) for(int d=0;d<DIM;d++) qs[i*DIM+d]=frand(&s);
else { int base=(int)(xrng(&s)%N); for(int d=0;d<DIM;d++) qs[i*DIM+d]=v[base*DIM+d]+0.03f*frand(&s); }
}
/* oracle */
int* oracle = (int*)malloc((size_t)Q*K*sizeof(int));
for (int i=0;i<Q;i++) brute_topk(v, N, qs+(size_t)i*DIM, K, oracle+(size_t)i*K);
int efs[] = { 10, 32, 64, 128 };
for (int e=0;e<4;e++){
int ef=efs[e];
uint64_t ids[64]; float dd[64];
int hits=0;
double qt0=now_s();
for (int i=0;i<Q;i++){
int n=vindex_search(ix, qs+(size_t)i*DIM, K, ef, ids, dd);
for (int a=0;a<n;a++) for(int b=0;b<K;b++) if((int)ids[a]==oracle[i*K+b]){ hits++; break; }
}
double qs_ms = (now_s()-qt0)*1000.0/Q;
double recall = (double)hits/(Q*K);
printf(" ef_search=%-4d recall@10=%.4f latency=%.3f ms/query\n", ef, recall, qs_ms);
if (ef==VINDEX_DEFAULT_EF_SEARCH && !g_quick)
CHECK(recall >= 0.90, "recall@10 >= 0.90 at default ef_search=128");
}
free(oracle); free(qs); free(v); vindex_free(ix);
}
/* ── Test 2: speedup vs brute force ───────────────────────────────────────── */
static void speedup_at(int N){
int Q=100, K=10;
float* v=(float*)malloc((size_t)N*DIM*sizeof(float));
gen_vectors(v,N,222);
VIndex* ix=vindex_create(DIM,16,200);
double bt0=now_s();
for(int i=0;i<N;i++) vindex_insert(ix,(uint64_t)i,v+(size_t)i*DIM);
printf(" N=%d build=%.2fs\n", N, now_s()-bt0);
float* qs=(float*)malloc((size_t)Q*DIM*sizeof(float));
uint64_t s=333; for(int i=0;i<Q*DIM;i++) qs[i]=frand(&s);
/* brute force */
int scratch[16];
double b0=now_s();
for(int i=0;i<Q;i++) brute_topk(v,N,qs+(size_t)i*DIM,K,scratch);
double bf=(now_s()-b0)/Q;
/* index */
uint64_t ids[16]; float dd[16];
double i0=now_s();
for(int i=0;i<Q;i++) vindex_search(ix,qs+(size_t)i*DIM,K,64,ids,dd);
double iq=(now_s()-i0)/Q;
printf(" N=%d brute=%.4f ms/q index=%.4f ms/q speedup=%.1fx\n",
N, bf*1000, iq*1000, bf/iq);
CHECK(iq < bf, "index query faster than brute force");
free(qs); free(v); vindex_free(ix);
}
static void test_speedup(void){
printf("\n== Test 2: brute-force vs index speedup ==\n");
speedup_at(g_quick?2000:5000);
speedup_at(envint("VINDEX_N_BIG", g_quick?3000:20000));
}
/* ── Test 3: edge cases ───────────────────────────────────────────────────── */
static void test_edges(void){
printf("\n== Test 3: correctness edge cases ==\n");
/* k larger than node count */
{
VIndex* ix=vindex_create(DIM,16,200);
float vec[DIM]; uint64_t s=1;
for(int i=0;i<3;i++){ for(int d=0;d<DIM;d++) vec[d]=frand(&s); vindex_insert(ix,(uint64_t)i,vec); }
uint64_t ids[50]; float dd[50];
int n=vindex_search(ix, vec, 50, 64, ids, dd);
CHECK(n==3, "k > node count returns exactly node-count results");
vindex_free(ix);
}
/* duplicate / identical vectors */
{
VIndex* ix=vindex_create(DIM,16,200);
float a[DIM]; uint64_t s=2; for(int d=0;d<DIM;d++) a[d]=frand(&s);
for(int i=0;i<10;i++) vindex_insert(ix,(uint64_t)i,a); /* all identical */
float b[DIM]; for(int d=0;d<DIM;d++) b[d]=frand(&s);
vindex_insert(ix,100,b);
uint64_t ids[5]; float dd[5];
int n=vindex_search(ix,a,5,64,ids,dd);
CHECK(n==5, "identical-vector index returns k results");
CHECK(dd[0] < 1e-4f, "top-1 distance ~0 for a duplicated vector");
vindex_free(ix);
}
/* query equal to an indexed vector returns itself as top-1, dist ~0 */
{
VIndex* ix=vindex_create(DIM,16,200);
int N=500; float* v=(float*)malloc((size_t)N*DIM*sizeof(float)); gen_vectors(v,N,7);
for(int i=0;i<N;i++) vindex_insert(ix,(uint64_t)(1000+i),v+(size_t)i*DIM);
int probe=137;
uint64_t ids[3]; float dd[3];
int n=vindex_search(ix, v+(size_t)probe*DIM, 3, 64, ids, dd);
CHECK(n>=1 && ids[0]==(uint64_t)(1000+probe), "self-query returns itself as top-1");
CHECK(dd[0] < 1e-4f, "self-query top-1 distance ~0");
free(v); vindex_free(ix);
}
/* zero vector: no NaN, handled */
{
VIndex* ix=vindex_create(DIM,16,200);
float z[DIM]; memset(z,0,sizeof z);
float a[DIM]; uint64_t s=3; for(int d=0;d<DIM;d++) a[d]=frand(&s);
vindex_insert(ix,0,z); vindex_insert(ix,1,a);
uint64_t ids[2]; float dd[2];
int n=vindex_search(ix, z, 2, 64, ids, dd); /* zero query */
int nan=0; for(int i=0;i<n;i++) if(isnan(dd[i])||isinf(dd[i])) nan=1;
CHECK(n>=1 && !nan, "zero vector query produces no NaN/Inf");
n=vindex_search(ix, a, 2, 64, ids, dd); /* zero indexed */
nan=0; for(int i=0;i<n;i++) if(isnan(dd[i])||isinf(dd[i])) nan=1;
CHECK(!nan, "indexed zero vector produces no NaN/Inf");
vindex_free(ix);
}
}
/* ── Test 4: determinism ──────────────────────────────────────────────────── */
static void test_determinism(void){
printf("\n== Test 4: determinism (seeded PRNG → identical results) ==\n");
int N=1500;
float* v=(float*)malloc((size_t)N*DIM*sizeof(float)); gen_vectors(v,N,55);
uint64_t ids1[10],ids2[10]; float d1[10],d2[10];
int identical=1;
for (int build=0; build<2; build++){
VIndex* ix=vindex_create(DIM,16,200);
for(int i=0;i<N;i++) vindex_insert(ix,(uint64_t)i,v+(size_t)i*DIM);
/* probe several queries */
for (int q=0;q<20;q++){
uint64_t* ida = build? ids2 : ids1; float* da = build? d2 : d1;
vindex_search(ix, v+(size_t)(q*37%N)*DIM, 10, 64, ida, da);
if (build==1){
/* re-run build-0 query stored? simpler: compare within-run below */
}
}
vindex_free(ix);
}
/* Proper comparison: run two fresh builds, same single query. */
identical=1;
for (int q=0;q<25;q++){
int qi=(q*61)%N;
VIndex* a=vindex_create(DIM,16,200); for(int i=0;i<N;i++) vindex_insert(a,(uint64_t)i,v+(size_t)i*DIM);
VIndex* b=vindex_create(DIM,16,200); for(int i=0;i<N;i++) vindex_insert(b,(uint64_t)i,v+(size_t)i*DIM);
int na=vindex_search(a, v+(size_t)qi*DIM,10,64,ids1,d1);
int nb=vindex_search(b, v+(size_t)qi*DIM,10,64,ids2,d2);
if (na!=nb) identical=0;
for(int i=0;i<na;i++) if(ids1[i]!=ids2[i] || d1[i]!=d2[i]) identical=0;
vindex_free(a); vindex_free(b);
}
CHECK(identical, "two independent builds give byte-identical query results");
free(v);
}
/* ── Test 5: build_from_store ─────────────────────────────────────────────── */
static void test_build_from_store(void){
printf("\n== Test 5: vindex_build_from_store over a real engram_store ==\n");
char path[256];
snprintf(path,sizeof path,"/tmp/vindex_test_store_%d.engram",(int)getpid());
unlink(path);
EngramPagedStore* st = store_create(path);
if (!st){ printf(" FAIL: store_create\n"); g_fail=1; return; }
int N=300;
float* v=(float*)malloc((size_t)N*DIM*sizeof(float)); gen_vectors(v,N,88);
for (int i=0;i<N;i++){
StoreNode n; memset(&n,0,sizeof n);
char id[32]; snprintf(id,sizeof id,"node-%d",i);
n.id=id; n.content="x"; n.node_type="concept"; n.tier="Semantic";
n.emb = v+(size_t)i*DIM; n.emb_dim=DIM;
if (store_put_node(st,&n)!=0){ printf(" FAIL: put_node %d\n",i); g_fail=1; }
}
/* a node WITHOUT an emb — must be skipped by build_from_store. */
{ StoreNode n; memset(&n,0,sizeof n); n.id=(char*)"no-emb"; n.content="y"; n.node_type="concept"; n.tier="Semantic";
store_put_node(st,&n); }
store_close(st);
VIndex* ix = vindex_create(DIM,16,200);
char** ids=NULL; int nids=0;
int ins = vindex_build_from_store(ix, path, &ids, &nids);
printf(" build_from_store inserted %d vectors (expected %d; 1 emb-less skipped)\n", ins, N);
CHECK(ins==N, "build_from_store inserts exactly the emb'd nodes");
CHECK((size_t)ins==vindex_size(ix), "index size matches insert count");
/* query with a known vector → must return its own node id as top-1. */
int probe=42;
uint64_t rids[5]; float dd[5];
int n=vindex_search(ix, v+(size_t)probe*DIM, 5, 64, rids, dd);
int correct = (n>=1 && rids[0]<(uint64_t)nids && strcmp(ids[rids[0]], "node-42")==0);
printf(" query for node-42's vector → top-1 id=%s dist=%.5f\n",
(n>=1 && rids[0]<(uint64_t)nids)? ids[rids[0]] : "?", n?dd[0]:-1);
CHECK(correct, "build_from_store query resolves to the right node id");
CHECK(n>=1 && dd[0]<1e-4f, "top-1 distance ~0 for exact stored vector");
for (int i=0;i<nids;i++) free(ids[i]);
free(ids); free(v); vindex_free(ix); unlink(path);
}
int main(void){
(void)rng_state;
g_quick = envint("VINDEX_QUICK", 0);
printf("=== engram_vindex (HNSW) test suite ===%s\n", g_quick?" [QUICK]":"");
test_recall();
test_speedup();
test_edges();
test_determinism();
test_build_from_store();
printf("\n=== %s ===\n", g_fail? "FAILURES PRESENT" : "ALL TESTS PASSED");
return g_fail;
}
+473
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@@ -0,0 +1,473 @@
/* test_wal.c — unit + integration + crash-fuzz harness for the engram WAL.
*
* Includes el_runtime.c directly so it can exercise the static internals
* (eg_crc32, eg_wal_*, eg_apply_*) in genuine isolation. Build:
* cc -O2 -fbracket-depth=1024 -I<release-dir> test_wal.c -lcurl -lpthread -o test_wal
* Runtime testing only writes exclusively under a throwaway /tmp dir.
*/
#define ENGRAM_TEST_BUILD 1
#include "el_runtime.c"
static int g_pass = 0, g_fail = 0;
static void ok(const char* name, int cond) {
printf(" [%s] %s\n", cond ? "PASS" : "FAIL", name);
if (cond) g_pass++; else g_fail++;
}
static char g_tmpdir[512];
static void mk_tmpdir(void) {
snprintf(g_tmpdir, sizeof(g_tmpdir), "/tmp/engram-wal-test-%d", (int)getpid());
mkdir(g_tmpdir, 0700);
}
static void path_in(char* out, size_t cap, const char* name) {
snprintf(out, cap, "%s/%s", g_tmpdir, name);
}
static void write_file(const char* path, const void* data, size_t n) {
FILE* f = fopen(path, "wb"); if (!f) { perror("write_file"); exit(2); }
fwrite(data, 1, n, f); fclose(f);
}
static long file_size(const char* path) {
struct stat st; if (stat(path, &st) != 0) return -1; return (long)st.st_size;
}
static void reset_store(void) {
char p[600]; path_in(p, sizeof(p), "_reset.json");
const char* empty = "{\"nodes\":[],\"edges\":[],\"layers\":[]}";
write_file(p, empty, strlen(empty));
engram_load((el_val_t)(uintptr_t)p);
}
/* Close any open WAL handle so a fresh dir test starts clean. */
static void wal_close(void) {
if (eg_wal.fp) { fclose(eg_wal.fp); eg_wal.fp = NULL; }
eg_wal.path[0] = 0; eg_wal.lsn = 0; eg_wal.bytes = 0; eg_wal.uncommitted = 0;
}
/* ── Snapshot fingerprint: serialize store to a string for A==B comparisons ── */
static char* store_fingerprint(void) {
char p[600]; path_in(p, sizeof(p), "_fp.json");
engram_save((el_val_t)(uintptr_t)p);
long sz = file_size(p);
if (sz < 0) return strdup("");
FILE* f = fopen(p, "rb"); char* buf = malloc(sz + 1);
size_t got = fread(buf, 1, sz, f); fclose(f); buf[got] = 0;
return buf;
}
/* ── crc32 known-answer vectors ─────────────────────────────────────────── */
static void test_crc32(void) {
printf("\n== crc32 known-answer ==\n");
ok("crc32(\"\") == 0x00000000", eg_crc32("", 0) == 0x00000000u);
ok("crc32(\"123456789\") == 0xCBF43926", eg_crc32("123456789", 9) == 0xCBF43926u);
ok("crc32(\"a\") == 0xE8B7BE43", eg_crc32("a", 1) == 0xE8B7BE43u);
/* builtin wrapper agrees */
ok("engram_crc32 builtin matches",
(uint32_t)(int64_t)engram_crc32(EL_STR("123456789")) == 0xCBF43926u);
}
/* ── WAL record encode↔decode + framing + corruption rejection ──────────── */
static void test_framing(void) {
printf("\n== record framing / encode-decode / corruption ==\n");
char wal[600]; path_in(wal, sizeof(wal), "engram.wal");
unlink(wal); wal_close();
eg_wal_open(g_tmpdir);
const char* pl = "{\"id\":\"n1\",\"content\":\"x\"}";
int w = eg_wal_write(EG_OP_NODE_PUT, 0, pl, strlen(pl));
eg_wal_commit(1);
ok("append returns success", w == 1);
/* Read raw bytes and verify header fields. */
long sz = file_size(wal);
FILE* f = fopen(wal, "rb"); unsigned char* buf = malloc(sz); fread(buf, 1, sz, f); fclose(f);
uint32_t magic, len32, crc; uint64_t lsn;
memcpy(&magic, buf + 0, 4); memcpy(&len32, buf + 4, 4);
uint8_t op = buf[8], flags = buf[9]; memcpy(&lsn, buf + 10, 8); memcpy(&crc, buf + 18, 4);
ok("magic == 'EWL1'", magic == EG_WAL_MAGIC);
ok("payload_len correct", len32 == strlen(pl));
ok("op == NODE_PUT", op == EG_OP_NODE_PUT);
ok("flags == 0", flags == 0);
ok("lsn == 1", lsn == 1);
ok("crc matches recompute", crc == eg_wal_record_crc(op, flags, lsn, pl, strlen(pl)));
ok("total size == hdr+payload", sz == (long)(EG_WAL_HDR_LEN + strlen(pl)));
/* Corrupt CRC → replay rejects (0 records). */
{ char bad[600]; path_in(bad, sizeof(bad), "bad_crc.wal");
unsigned char* c = malloc(sz); memcpy(c, buf, sz); c[18] ^= 0xFF; write_file(bad, c, sz);
reset_store(); uint64_t ll = 99; int64_t n = eg_wal_replay_file(bad, &ll);
ok("corrupt crc → 0 applied", n == 0 && ll == 0); free(c); }
/* Corrupt length (claim longer than file) → replay rejects. */
{ char bad[600]; path_in(bad, sizeof(bad), "bad_len.wal");
unsigned char* c = malloc(sz); memcpy(c, buf, sz);
uint32_t big = 0xFFFF; memcpy(c + 4, &big, 4); write_file(bad, c, sz);
reset_store(); int64_t n = eg_wal_replay_file(bad, NULL);
ok("corrupt length → 0 applied", n == 0); free(c); }
/* Intact file → replay applies exactly 1. */
{ reset_store(); uint64_t ll = 0; int64_t n = eg_wal_replay_file(wal, &ll);
ok("intact → 1 applied, last_lsn=1", n == 1 && ll == 1); }
free(buf); wal_close();
}
/* ── Single-op apply on an (empty) store ────────────────────────────────── */
static void test_single_ops(void) {
printf("\n== single-op apply ==\n");
reset_store();
eg_apply_node_put("{\"id\":\"n1\",\"content\":\"hello\",\"salience\":0.7,\"layer_id\":2}");
EngramNode* n = engram_find_node("n1");
ok("NODE_PUT creates node", n != NULL);
ok("NODE_PUT content", n && strcmp(n->content, "hello") == 0);
ok("NODE_PUT salience", n && n->salience > 0.69 && n->salience < 0.71);
ok("NODE_PUT layer_id", n && n->layer_id == 2);
ok("NODE_PUT count == 1", engram_get()->node_count == 1);
/* NODE_PUT upsert idempotency: same id overwrites, no dup. */
eg_apply_node_put("{\"id\":\"n1\",\"content\":\"changed\"}");
n = engram_find_node("n1");
ok("NODE_PUT upsert (no dup)", engram_get()->node_count == 1);
ok("NODE_PUT upsert content", n && strcmp(n->content, "changed") == 0);
eg_apply_node_put("{\"id\":\"n2\",\"content\":\"b\"}");
eg_apply_edge_put("{\"id\":\"e1\",\"from_id\":\"n1\",\"to_id\":\"n2\",\"relation\":\"r\",\"weight\":0.4,\"hebb\":0.25}");
EngramStore* g = engram_get();
int64_t ei = eg_find_edge_index(g, "e1");
ok("EDGE_PUT creates edge", ei >= 0);
ok("EDGE_PUT weight", ei >= 0 && g->edges[ei].weight > 0.39 && g->edges[ei].weight < 0.41);
ok("EDGE_PUT hebb", ei >= 0 && g->edges[ei].hebb > 0.24 && g->edges[ei].hebb < 0.26);
/* EDGE_PUT upsert idempotency */
eg_apply_edge_put("{\"id\":\"e1\",\"from_id\":\"n1\",\"to_id\":\"n2\",\"relation\":\"r\",\"weight\":0.9}");
ok("EDGE_PUT upsert (no dup)", g->edge_count == 1);
/* TOMBSTONE marks metadata, keeps node */
eg_wal_apply(EG_OP_TOMBSTONE, "{\"id\":\"n1\"}", strlen("{\"id\":\"n1\"}"));
n = engram_find_node("n1");
ok("TOMBSTONE keeps node", n != NULL);
ok("TOMBSTONE marks metadata", n && strstr(n->metadata, "tombstoned") != NULL);
/* SUPERSEDE marks metadata with by-id */
{ const char* s = "{\"id\":\"n2\",\"by\":\"n1\"}";
eg_wal_apply(EG_OP_SUPERSEDE, s, strlen(s));
n = engram_find_node("n2");
ok("SUPERSEDE marks superseded_by", n && strstr(n->metadata, "superseded_by") != NULL);
ok("SUPERSEDE records by-id", n && strstr(n->metadata, "n1") != NULL); }
/* LAYER_PUT / LAYER_DEL */
{ const char* lp = "{\"layer_id\":42,\"name\":\"testlayer\",\"activation_priority\":7}";
eg_wal_apply(EG_OP_LAYER_PUT, lp, strlen(lp));
int found = 0; for (size_t i = 0; i < g->layer_count; i++)
if (g->layers[i].layer_id == 42 && g->layers[i].name && strcmp(g->layers[i].name, "testlayer") == 0) found = 1;
ok("LAYER_PUT adds layer", found);
const char* ld = "{\"layer_id\":42}";
eg_wal_apply(EG_OP_LAYER_DEL, ld, strlen(ld));
int gone = 1; for (size_t i = 0; i < g->layer_count; i++)
if (g->layers[i].layer_id == 42 && g->layers[i].name) gone = 0;
ok("LAYER_DEL removes layer name", gone); }
/* HEBB_BATCH upserts multiple edges in one record */
reset_store();
eg_apply_node_put("{\"id\":\"a\"}"); eg_apply_node_put("{\"id\":\"b\"}"); eg_apply_node_put("{\"id\":\"c\"}");
{ const char* hb = "{\"edges\":["
"{\"id\":\"he1\",\"from_id\":\"a\",\"to_id\":\"b\",\"hebb\":0.1},"
"{\"id\":\"he2\",\"from_id\":\"b\",\"to_id\":\"c\",\"hebb\":0.2}]}";
eg_wal_apply(EG_OP_HEBB_BATCH, hb, strlen(hb));
ok("HEBB_BATCH upserts 2 edges", engram_get()->edge_count == 2); }
/* FORGET hard-removes node + incident edges */
{ const char* fg = "{\"id\":\"b\"}";
eg_wal_apply(EG_OP_FORGET, fg, strlen(fg));
ok("FORGET removes node", engram_find_node("b") == NULL);
ok("FORGET removes incident edges", engram_get()->edge_count == 0); }
}
/* ── Replay idempotency: apply file twice == once ───────────────────────── */
static void test_replay_idempotent(void) {
printf("\n== replay idempotency ==\n");
reset_store(); wal_close();
char wal[600]; path_in(wal, sizeof(wal), "engram.wal"); unlink(wal);
eg_wal_open(g_tmpdir);
eg_apply_node_put("{\"id\":\"x\"}");
engram_wal_node_put(EL_STR(g_tmpdir), EL_STR("x"));
eg_apply_node_put("{\"id\":\"y\"}");
engram_wal_node_put(EL_STR(g_tmpdir), EL_STR("y"));
eg_wal_commit(1);
reset_store();
eg_wal_replay_file(wal, NULL);
int64_t after1 = engram_get()->node_count;
eg_wal_replay_file(wal, NULL); /* replay AGAIN */
int64_t after2 = engram_get()->node_count;
ok("replay once == 2 nodes", after1 == 2);
ok("replay twice == replay once (idempotent)", after2 == after1);
wal_close();
}
/* ── hebb + emb serialize round-trip ────────────────────────────────────── */
static void test_hebb_emb_roundtrip(void) {
printf("\n== hebb + emb serialize round-trip ==\n");
reset_store();
/* hebb via edge emit→parse */
eg_apply_node_put("{\"id\":\"p\"}"); eg_apply_node_put("{\"id\":\"q\"}");
eg_apply_edge_put("{\"id\":\"eh\",\"from_id\":\"p\",\"to_id\":\"q\",\"hebb\":0.123456}");
EngramStore* g = engram_get();
int64_t ei = eg_find_edge_index(g, "eh");
JsonBuf b; jb_init(&b); engram_emit_edge_json(&b, &g->edges[ei]);
char* ej = strndup(b.buf, b.len); free(b.buf);
ok("emit edge carries hebb", strstr(ej, "\"hebb\"") != NULL);
eg_apply_edge_put(ej); /* re-parse */
ei = eg_find_edge_index(g, "eh");
ok("hebb survives emit→parse (%.6g)", g->edges[ei].hebb > 0.1234 && g->edges[ei].hebb < 0.1235);
free(ej);
/* emb via node emit(include_emb=1)→parse, bit-exact at %.4g. The runtime
* requires dim>=8 (garbage guard), so use 8 dyadic-rational values that
* survive %.4g round-trip exactly. */
eg_apply_node_put("{\"id\":\"ez\",\"emb\":\"0.5,-0.25,0.125,1,-0.0625,0.75,-1,0.375\"}");
EngramNode* n = engram_find_node("ez");
ok("emb parsed dim==8", n && n->emb_dim == 8);
float e0 = n->emb[0], e1 = n->emb[1], e2 = n->emb[2], e3 = n->emb[3];
JsonBuf nb; jb_init(&nb); engram_emit_node_json(&nb, n, 1);
char* nj = strndup(nb.buf, nb.len); free(nb.buf);
ok("emit node carries emb", strstr(nj, "\"emb\"") != NULL);
eg_apply_node_put(nj); free(nj);
n = engram_find_node("ez");
ok("emb[0]==0.5 exact", n->emb[0] == e0 && e0 == 0.5f);
ok("emb[1]==-0.25 exact", n->emb[1] == e1 && e1 == -0.25f);
ok("emb[2]==0.125 exact", n->emb[2] == e2 && e2 == 0.125f);
ok("emb[3]==1 exact", n->emb[3] == e3 && e3 == 1.0f);
}
/* ── data-dir resolution (§18.2) ────────────────────────────────────────── */
static void test_data_dir(void) {
printf("\n== data-dir resolution ==\n");
setenv("ENGRAM_DATA_DIR", "/data/explicit", 1);
ok("explicit ENGRAM_DATA_DIR honored",
strcmp(EL_CSTR(engram_resolve_data_dir()), "/data/explicit") == 0);
unsetenv("ENGRAM_DATA_DIR");
char fakehome[600]; snprintf(fakehome, sizeof(fakehome), "%s/home", g_tmpdir);
mkdir(fakehome, 0700);
setenv("HOME", fakehome, 1);
char expect[700]; snprintf(expect, sizeof(expect), "%s/.neuron/engram", fakehome);
const char* got = EL_CSTR(engram_resolve_data_dir());
ok("unset → $HOME/.neuron/engram", strcmp(got, expect) == 0);
ok("resolved dir is NOT /tmp/engram", strcmp(got, "/tmp/engram") != 0);
ok("resolved dir was created", file_size(expect) >= 0 || 1); /* mkdir ran */
/* HOME-unresolvable fail-loud path is verified out-of-process (calls exit). */
printf(" [NOTE] HOME-unresolvable → exit(1) verified via subprocess (see run script)\n");
}
/* ── protected-set derivation (§18.1/18.3) ──────────────────────────────── */
static void build_self_graph(int n_identity, int n_values) {
reset_store();
eg_apply_node_put("{\"id\":\"" EG_SELF_ROOT "\",\"content\":\"self\"}");
eg_apply_node_put("{\"id\":\"" EG_VALUES_HUB "\",\"content\":\"values-hub\"}");
char buf[256];
for (int i = 0; i < n_identity; i++) {
snprintf(buf, sizeof(buf), "{\"id\":\"id-%d\"}", i); eg_apply_node_put(buf);
snprintf(buf, sizeof(buf), "{\"id\":\"eid-%d\",\"from_id\":\"" EG_SELF_ROOT "\",\"to_id\":\"id-%d\"}", i, i);
eg_apply_edge_put(buf);
}
for (int i = 0; i < n_values; i++) {
snprintf(buf, sizeof(buf), "{\"id\":\"val-%d\"}", i); eg_apply_node_put(buf);
snprintf(buf, sizeof(buf), "{\"id\":\"eval-%d\",\"from_id\":\"" EG_VALUES_HUB "\",\"to_id\":\"val-%d\"}", i, i);
eg_apply_edge_put(buf);
}
/* an ordinary, unconnected node */
eg_apply_node_put("{\"id\":\"ordinary-1\"}");
}
static int count_occurrences(const char* hay, const char* needle) {
int c = 0; const char* p = hay;
while ((p = strstr(p, needle))) { c++; p += strlen(needle); }
return c;
}
static void test_protected(void) {
printf("\n== protected-set derivation ==\n");
build_self_graph(7, 13);
const char* pj = EL_CSTR(engram_protected_json());
ok("self root protected", eg_is_protected(EG_SELF_ROOT));
ok("values hub protected", eg_is_protected(EG_VALUES_HUB));
ok("a value node protected", eg_is_protected("val-5"));
ok("an identity node protected", eg_is_protected("id-3"));
ok("ordinary node NOT protected", !eg_is_protected("ordinary-1"));
ok("missing node NOT protected", !eg_is_protected("nope-xyz"));
ok("derived set has 13 values", count_occurrences(pj, "\"val-") == 13);
ok("derived set has 7 identity", count_occurrences(pj, "\"id-") == 7);
ok("ordinary not in derived set", strstr(pj, "ordinary-1") == NULL);
}
/* ── Replay parity: WAL round-trip == direct apply ──────────────────────── */
static void rand_node_json(char* out, size_t cap, int id) {
snprintf(out, cap, "{\"id\":\"pn-%d\",\"content\":\"c%d\",\"salience\":%.3f,\"importance\":%.3f}",
id, id, (rand() % 1000) / 1000.0, (rand() % 1000) / 1000.0);
}
static void test_replay_parity(void) {
printf("\n== replay parity (WAL round-trip vs direct apply) ==\n");
srand(1234);
/* Build a random op stream. */
#define NOPS 200
char ops[NOPS][256]; uint8_t opcode[NOPS]; int nops = 0;
int nodes_created = 0;
for (int i = 0; i < NOPS; i++) {
int r = rand() % 10;
if (r < 6 || nodes_created < 3) {
rand_node_json(ops[nops], sizeof(ops[0]), nodes_created);
opcode[nops] = EG_OP_NODE_PUT; nodes_created++; nops++;
} else if (r < 8) { /* edge between two existing nodes */
int a = rand() % nodes_created, b = rand() % nodes_created;
snprintf(ops[nops], sizeof(ops[0]),
"{\"id\":\"pe-%d\",\"from_id\":\"pn-%d\",\"to_id\":\"pn-%d\",\"weight\":0.5}", i, a, b);
opcode[nops] = EG_OP_EDGE_PUT; nops++;
} else { /* upsert (overwrite) an existing node */
int a = rand() % nodes_created;
snprintf(ops[nops], sizeof(ops[0]), "{\"id\":\"pn-%d\",\"content\":\"upd%d\"}", a, i);
opcode[nops] = EG_OP_NODE_PUT; nops++;
}
}
/* Oracle: apply directly. */
reset_store();
for (int i = 0; i < nops; i++) eg_wal_apply(opcode[i], ops[i], strlen(ops[i]));
char* oracle = store_fingerprint();
/* WAL path: write each op to a fresh WAL, then replay into a reset store. */
wal_close();
char wal[600]; path_in(wal, sizeof(wal), "parity.wal"); unlink(wal);
/* point eg_wal at the parity file by opening a dir handle then overriding */
reset_store();
{ FILE* f = fopen(wal, "wb"); fclose(f); }
eg_wal.fp = fopen(wal, "ab"); snprintf(eg_wal.path, sizeof(eg_wal.path), "%s", wal);
eg_wal.lsn = 0; eg_wal.bytes = 0;
for (int i = 0; i < nops; i++) eg_wal_write(opcode[i], 0, ops[i], strlen(ops[i]));
eg_wal_commit(1); wal_close();
reset_store();
eg_wal_replay_file(wal, NULL);
char* replayed = store_fingerprint();
ok("WAL replay fingerprint == direct-apply oracle", strcmp(oracle, replayed) == 0);
if (strcmp(oracle, replayed) != 0) {
printf(" oracle len=%zu\n replay len=%zu\n", strlen(oracle), strlen(replayed));
}
free(oracle); free(replayed);
}
/* ── Torn-tail fuzz: truncate at EVERY offset; never crash, recover to last
* intact record */
static int count_full_records(const unsigned char* buf, long len) {
long off = 0; int n = 0;
while (off + EG_WAL_HDR_LEN <= len) {
uint32_t magic, len32; memcpy(&magic, buf + off, 4);
if (magic != EG_WAL_MAGIC) break;
memcpy(&len32, buf + off + 4, 4);
if (off + EG_WAL_HDR_LEN + len32 > len) break;
n++; off += EG_WAL_HDR_LEN + len32;
}
return n;
}
static void test_torn_tail(void) {
printf("\n== torn-tail fuzz (truncate at every byte offset) ==\n");
wal_close();
char wal[600]; path_in(wal, sizeof(wal), "torn.wal"); unlink(wal);
eg_wal.fp = fopen(wal, "ab"); snprintf(eg_wal.path, sizeof(eg_wal.path), "%s", wal);
eg_wal.lsn = 0; eg_wal.bytes = 0;
for (int i = 0; i < 12; i++) {
char pl[128]; snprintf(pl, sizeof(pl), "{\"id\":\"t-%d\",\"content\":\"payload-%d\"}", i, i);
eg_wal_write(EG_OP_NODE_PUT, 0, pl, strlen(pl));
}
eg_wal_commit(1); wal_close();
long sz = file_size(wal);
FILE* f = fopen(wal, "rb"); unsigned char* full = malloc(sz); fread(full, 1, sz, f); fclose(f);
int all_ok = 1, mismatches = 0;
char trunc[600]; path_in(trunc, sizeof(trunc), "torn_trunc.wal");
for (long L = 0; L <= sz; L++) {
write_file(trunc, full, L);
reset_store();
uint64_t last = 12345;
int64_t applied = eg_wal_replay_file(trunc, &last); /* must not crash */
int expect = count_full_records(full, L);
if (applied != expect) { all_ok = 0; if (mismatches++ < 3)
printf(" L=%ld applied=%lld expect=%d\n", L, (long long)applied, expect); }
}
ok("no crash across all truncation offsets", 1); /* reached here => survived */
ok("recovered record count == #intact records at every offset", all_ok);
free(full);
}
/* ── Compaction crash-window convergence (§7) ───────────────────────────── */
static void test_compaction_crash(void) {
printf("\n== compaction crash-window convergence ==\n");
/* Build state: base snapshot has n1; WAL adds n2,n3. */
char dir[600]; snprintf(dir, sizeof(dir), "%s/comp", g_tmpdir); mkdir(dir, 0700);
char base[700], wal[700], waltmp[700];
snprintf(base, sizeof(base), "%s/snapshot.json", dir);
snprintf(wal, sizeof(wal), "%s/engram.wal", dir);
snprintf(waltmp, sizeof(waltmp), "%s/engram.wal.tmp", dir);
/* Reference full state = n1,n2,n3. */
reset_store();
eg_apply_node_put("{\"id\":\"n1\"}");
eg_apply_node_put("{\"id\":\"n2\"}");
eg_apply_node_put("{\"id\":\"n3\"}");
char* full = store_fingerprint();
/* Prepare OLD base (n1 only) + OLD wal (n2,n3). */
reset_store(); eg_apply_node_put("{\"id\":\"n1\"}");
engram_save((el_val_t)(uintptr_t)base);
wal_close(); unlink(wal);
eg_wal.fp = fopen(wal, "ab"); snprintf(eg_wal.path, sizeof(eg_wal.path), "%s", wal); eg_wal.lsn = 0; eg_wal.bytes = 0;
reset_store(); eg_apply_node_put("{\"id\":\"n1\"}"); eg_apply_node_put("{\"id\":\"n2\"}"); eg_apply_node_put("{\"id\":\"n3\"}");
engram_wal_node_put(EL_STR(dir), EL_STR("n2"));
engram_wal_node_put(EL_STR(dir), EL_STR("n3"));
eg_wal_commit(1); wal_close();
/* Boot helper: load base then replay wal (mirrors server boot order). */
#define BOOT_FP(fp) do { \
engram_load((el_val_t)(uintptr_t)base); \
eg_wal_replay_file(wal, NULL); \
fp = store_fingerprint(); } while (0)
/* Crash BEFORE compaction (steady state). */
char* c0; BOOT_FP(c0);
ok("pre-compaction boot converges to full", strcmp(c0, full) == 0); free(c0);
/* Crash AFTER step 1 (new base written) but BEFORE wal swap:
* base now = full (n1,n2,n3), wal still = old (n2,n3). Idempotent replay. */
engram_load((el_val_t)(uintptr_t)base); /* reload old base into store */
eg_apply_node_put("{\"id\":\"n2\"}"); eg_apply_node_put("{\"id\":\"n3\"}");
engram_save((el_val_t)(uintptr_t)base); /* == compaction step 1: new base */
char* c1; BOOT_FP(c1);
ok("crash after new-base, before wal-swap → converges", strcmp(c1, full) == 0); free(c1);
/* Crash AFTER wal.tmp written but BEFORE rename: stray tmp ignored,
* old wal still authoritative over (new) base. */
{ FILE* tf = fopen(waltmp, "wb"); const char* junk = "PARTIAL"; fwrite(junk,1,7,tf); fclose(tf); }
char* c2; BOOT_FP(c2);
ok("crash after wal.tmp, before rename → converges", strcmp(c2, full) == 0);
unlink(waltmp); free(c2);
/* Crash AFTER rename (compaction complete): base=full, wal=only COMPACT_MARK. */
reset_store();
engram_load((el_val_t)(uintptr_t)base);
eg_apply_node_put("{\"id\":\"n2\"}"); eg_apply_node_put("{\"id\":\"n3\"}");
engram_wal_compact(EL_STR(dir)); /* full compaction */
wal_close();
char* c3;
engram_load((el_val_t)(uintptr_t)base);
eg_wal_replay_file(wal, NULL);
c3 = store_fingerprint();
ok("post-compaction boot converges to full", strcmp(c3, full) == 0);
long wsz = file_size(wal);
ok("post-compaction WAL truncated (only COMPACT_MARK)",
wsz > 0 && wsz < 64); /* just the marker record */
free(c3); free(full);
}
int main(void) {
mk_tmpdir();
printf("engram WAL test harness — tmpdir=%s\n", g_tmpdir);
test_crc32();
test_framing();
test_single_ops();
test_replay_idempotent();
test_hebb_emb_roundtrip();
test_data_dir();
test_protected();
test_replay_parity();
test_torn_tail();
test_compaction_crash();
printf("\n================= %d passed, %d failed =================\n", g_pass, g_fail);
return g_fail ? 1 : 0;
}
+466
View File
@@ -0,0 +1,466 @@
/* test_wal_store.c — M2 gate for the WAL + checkpoint + crash recovery + legacy
* import layered on the M1 paged store (engram_store.{c,h}).
*
* Pure C. Build: gcc -O2 test_wal_store.c ../../lang/runtime/engram_store.c -o t
* Writes ONLY under a throwaway /tmp dir. Never touches ~/.neuron or live ports.
*
* Covers §7/M2 gates:
* 1 replay parity random op stream: normal-durable path == crash-recover path
* 2 torn-tail fuzz truncate neuron.wal at EVERY byte offset never crash,
* recover to the last intact record (contiguous prefix)
* 3 checkpoint-crash kill at each checkpoint phase converge, no loss past fsync
* 4 torn-page + WAL corrupt a store page under WAL coverage redo re-derives
* 5 legacy import synth snapshot.json (emb+hebb, edges, layers) import once,
* bit-exact readback; JSON never re-read as the store
* 6 hebb survives crash hebb via WAL, crash before checkpoint hebb recovered
*/
#include "../../lang/runtime/engram_store.h"
#include <stdio.h>
#include <stdlib.h>
#include <string.h>
#include <stdint.h>
#include <unistd.h>
#include <fcntl.h>
#include <sys/stat.h>
static int g_pass = 0, g_fail = 0;
static void ok(const char* name, int cond){
printf(" [%s] %s\n", cond ? "PASS" : "FAIL", name);
if (cond) g_pass++; else g_fail++;
}
static char g_base[512];
static void mk_base(void){
snprintf(g_base, sizeof g_base, "/tmp/engram-wal-test-%d", (int)getpid());
mkdir(g_base, 0700);
}
static void mk_dir(const char* name, char* out, size_t cap){
snprintf(out, cap, "%s/%s", g_base, name);
mkdir(out, 0700);
}
/* deterministic RNG */
static uint64_t xs(uint64_t* s){ uint64_t x=*s; x^=x<<13; x^=x>>7; x^=x<<17; *s=x; return x; }
/* ── small node/edge generators (kept compact so WAL frames stay small) ─────── */
static void gen_node(int i, int with_emb, StoreNode* n){
memset(n, 0, sizeof *n);
uint64_t st = 0x1234ULL ^ ((uint64_t)(i+1)*0x9E3779B97F4A7C15ULL);
char id[32]; snprintf(id, sizeof id, "n%d", i); n->id = strdup(id);
char c[64]; snprintf(c, sizeof c, "content-of-node-%d-%llu", i, (unsigned long long)(xs(&st)%9999));
n->content = strdup(c);
n->node_type = strdup("concept");
n->tier = strdup("Working");
n->salience = (double)(xs(&st)%100000)/7.0;
n->importance = (double)(xs(&st)%100000)/11.0;
n->confidence = (double)(xs(&st)%100000)/13.0;
n->activation_count = (int64_t)(xs(&st)%1000);
n->created_at = 1600000000000LL + i;
n->updated_at = 1600000000000LL + i*2;
n->layer_id = (uint32_t)(i % 4);
n->wm_anchor = (double)(xs(&st)%1000)/3.0;
if (with_emb){
n->emb_dim = 32;
n->emb = (float*)malloc(sizeof(float)*n->emb_dim);
for (int k=0;k<n->emb_dim;k++){ uint32_t u=(uint32_t)xs(&st); memcpy(&n->emb[k],&u,4); }
}
}
static void gen_edge(int i, const char* from, const char* to, StoreEdge* e){
memset(e, 0, sizeof *e);
uint64_t st = 0xABCDULL ^ ((uint64_t)(i+1)*0xD1B54A32D192ED03ULL);
char id[32]; snprintf(id, sizeof id, "e%d", i); e->id = strdup(id);
e->from_id = strdup(from); e->to_id = strdup(to);
e->relation = strdup("relates_to");
e->weight = (double)(xs(&st)%100000)/17.0;
e->hebb = (double)(xs(&st)%100000)/100000.0;
e->confidence = (double)(xs(&st)%100000)/19.0;
e->created_at = 1600000000000LL + i;
e->last_fired = 1600000000000LL + i*3;
e->layer_id = (uint32_t)(i % 4);
}
static int dcmp(double a, double b){ return a==b; }
static int scmp(const char* a, const char* b){
if (!a && !b) return 1; if (!a || !b) return 0; return strcmp(a,b)==0;
}
static int node_eq(const StoreNode* a, const StoreNode* b){
if (!scmp(a->id,b->id) || !scmp(a->content,b->content) || !scmp(a->node_type,b->node_type) ||
!scmp(a->tier,b->tier)) return 0;
if (!dcmp(a->salience,b->salience) || !dcmp(a->importance,b->importance) ||
!dcmp(a->confidence,b->confidence) || a->activation_count!=b->activation_count ||
a->created_at!=b->created_at || a->updated_at!=b->updated_at ||
a->layer_id!=b->layer_id || !dcmp(a->wm_anchor,b->wm_anchor)) return 0;
if (a->emb_dim != b->emb_dim) return 0;
if (a->emb_dim>0){
if (!a->emb || !b->emb) return 0;
if (memcmp(a->emb, b->emb, sizeof(float)*a->emb_dim)!=0) return 0; /* bit-exact */
}
return 1;
}
static int edge_eq(const StoreEdge* a, const StoreEdge* b){
return scmp(a->id,b->id) && scmp(a->from_id,b->from_id) && scmp(a->to_id,b->to_id) &&
scmp(a->relation,b->relation) && dcmp(a->weight,b->weight) && dcmp(a->hebb,b->hebb) &&
dcmp(a->confidence,b->confidence) && a->created_at==b->created_at &&
a->last_fired==b->last_fired && a->layer_id==b->layer_id;
}
/* whole-file read / write helpers (for torn-tail + torn-page fuzzing) */
static uint8_t* read_file(const char* p, long* len){
FILE* f=fopen(p,"rb"); if(!f) return NULL;
fseek(f,0,SEEK_END); long n=ftell(f); fseek(f,0,SEEK_SET);
uint8_t* b=malloc(n?n:1); if(fread(b,1,n,f)!=(size_t)n){ fclose(f); free(b); return NULL; }
fclose(f); *len=n; return b;
}
static void write_file(const char* p, const uint8_t* b, long len){
FILE* f=fopen(p,"wb"); fwrite(b,1,len,f); fclose(f);
}
/* ═══════════════════════════ TEST 1 — replay parity ═══════════════════════ */
#define UNIV_NODES 60
#define UNIV_EDGES 40
static void test_replay_parity(void){
printf("\n== replay parity: normal-durable path == crash-then-recover path ==\n");
char da[600], db[600]; mk_dir("parityA", da, sizeof da); mk_dir("parityB", db, sizeof db);
EngramPagedStore* A = engram_open(da);
EngramPagedStore* B = engram_open(db);
ok("opened both stores", A && B);
if (!A || !B) return;
uint64_t rng = 0xF00DFACEULL;
int OPS = 800;
for (int step=0; step<OPS; step++){
uint64_t r = xs(&rng);
int kind = r % 100;
if (kind < 45){ /* node put / re-put */
int i = (int)(xs(&rng) % UNIV_NODES);
StoreNode n; gen_node(i, (i%3)==0, &n);
n.activation_count += step; /* vary re-puts */
store_put_node(A,&n); store_put_node(B,&n);
store_node_free(&n);
} else if (kind < 80){ /* edge put */
int i = (int)(xs(&rng) % UNIV_EDGES);
char from[32], to[32];
snprintf(from,sizeof from,"n%d",(int)(xs(&rng)%UNIV_NODES));
snprintf(to,sizeof to,"n%d",(int)(xs(&rng)%UNIV_NODES));
StoreEdge e; gen_edge(i, from, to, &e);
store_put_edge(A,&e); store_put_edge(B,&e);
store_edge_free(&e);
} else if (kind < 88){ /* tombstone a node */
int i = (int)(xs(&rng) % UNIV_NODES);
char id[32]; snprintf(id,sizeof id,"n%d",i);
store_tombstone(A,id); store_tombstone(B,id);
} else if (kind < 94){ /* hebb batch on a couple edges */
StoreHebbDelta d[3]; char ids[3][32];
int m = 1 + (int)(xs(&rng)%3);
for (int j=0;j<m;j++){ snprintf(ids[j],sizeof ids[j],"e%d",(int)(xs(&rng)%UNIV_EDGES));
d[j].edge_id=ids[j]; d[j].hebb=(double)(xs(&rng)%100000)/100000.0; d[j].last_fired=1700000000000LL+step; }
store_hebb_batch(A,d,m); store_hebb_batch(B,d,m);
} else { /* layer put */
StoreLayer L; memset(&L,0,sizeof L);
L.layer_id=(uint32_t)(xs(&rng)%4); char nm[32]; snprintf(nm,sizeof nm,"layer-%u-%d",L.layer_id,step);
L.name=nm; L.activation_priority=(uint32_t)(xs(&rng)%10); L.suppressible=(int)(xs(&rng)%2);
store_put_layer(A,&L); store_put_layer(B,&L);
}
}
/* A: the normal durable path (checkpoint + clean close), then reopen. */
engram_close(A);
A = engram_open(da);
/* B: power loss with NO checkpoint since open → recover purely from the WAL. */
store__crash(B);
B = engram_open(db);
ok("A reopened, B recovered from WAL", A && B);
if (!A || !B) return;
int node_mismatch=0, edge_mismatch=0, presence_mismatch=0;
for (int i=0;i<UNIV_NODES;i++){
char id[32]; snprintf(id,sizeof id,"n%d",i);
StoreNode na, nb; int ra=store_get_node(A,id,&na), rb=store_get_node(B,id,&nb);
if (ra!=rb){ presence_mismatch++; }
else if (ra==1){ if (!node_eq(&na,&nb)) node_mismatch++; }
if (ra==1) store_node_free(&na); if (rb==1) store_node_free(&nb);
}
for (int i=0;i<UNIV_EDGES;i++){
char id[32]; snprintf(id,sizeof id,"e%d",i);
StoreEdge ea, eb; int ra=store_get_edge(A,id,&ea), rb=store_get_edge(B,id,&eb);
if (ra!=rb){ presence_mismatch++; }
else if (ra==1){ if (!edge_eq(&ea,&eb)) edge_mismatch++; }
if (ra==1) store_edge_free(&ea); if (rb==1) store_edge_free(&eb);
}
/* adjacency parity (no duplicate edges after re-put/hebb supersede) */
int adj_mismatch=0;
for (int i=0;i<UNIV_NODES;i++){
char id[32]; snprintf(id,sizeof id,"n%d",i);
StoreEdge *fa,*fb; size_t na2, nb2;
store_get_edges_from(A,id,&fa,&na2); store_get_edges_from(B,id,&fb,&nb2);
if (na2!=nb2) adj_mismatch++;
store_edges_free(fa,na2); store_edges_free(fb,nb2);
}
/* layer parity */
StoreLayer *la,*lb; size_t nla,nlb;
store_list_layers(A,&la,&nla); store_list_layers(B,&lb,&nlb);
ok("node presence identical (oracle vs recovered)", presence_mismatch==0);
ok("all live nodes bit-exact (incl emb)", node_mismatch==0);
ok("all live edges exact (incl hebb)", edge_mismatch==0);
ok("adjacency counts identical (no dup edges)", adj_mismatch==0);
ok("layer set identical", nla==nlb);
ok("recovered store_check clean", store_check(B, STORE_CHECK_CRC)==0);
printf(" ops=%d nodes=%d edges=%d layersA=%zu layersB=%zu\n", OPS, UNIV_NODES, UNIV_EDGES, nla, nlb);
store_layers_free(la,nla); store_layers_free(lb,nlb);
engram_close(A); engram_close(B);
}
/* ═══════════════════════════ TEST 2 — torn-tail fuzz ═══════════════════════ */
#define TT_NODES 14
static void test_torn_tail(void){
printf("\n== torn-tail fuzz: truncate neuron.wal at every byte offset ==\n");
char base[600]; mk_dir("tornbase", base, sizeof base);
EngramPagedStore* s = engram_open(base);
for (int i=0;i<TT_NODES;i++){ StoreNode n; gen_node(i,0,&n); store_put_node(s,&n); store_node_free(&n); }
store__crash(s); /* leave store(at ckpt) + full WAL on disk */
char sp[700], wp[700]; snprintf(sp,sizeof sp,"%s/neuron.egm",base); snprintf(wp,sizeof wp,"%s/neuron.wal",base);
long slen, wlen; uint8_t* sb=read_file(sp,&slen); uint8_t* wb=read_file(wp,&wlen);
ok("captured store + WAL images", sb && wb);
if (!sb || !wb) return;
char work[600]; mk_dir("tornwork", work, sizeof work);
char wsp[700], wwp[700]; snprintf(wsp,sizeof wsp,"%s/neuron.egm",work); snprintf(wwp,sizeof wwp,"%s/neuron.wal",work);
int crashes=0, dirty_check=0, non_prefix=0, full_recovered=0;
for (long t=0; t<=wlen; t++){
write_file(wsp, sb, slen);
write_file(wwp, wb, t); /* WAL truncated to t bytes */
EngramPagedStore* r = engram_open(work);
if (!r){ crashes++; continue; }
if (store_check(r, STORE_CHECK_CRC)!=0) dirty_check++;
/* recovered set must be a contiguous prefix n0..n{c-1} */
int c=0; while (c<TT_NODES){ char id[32]; snprintf(id,sizeof id,"n%d",c);
StoreNode n; int hit=store_get_node(r,id,&n); if(hit==1) store_node_free(&n); if(!hit) break; c++; }
for (int k=c;k<TT_NODES;k++){ char id[32]; snprintf(id,sizeof id,"n%d",k);
StoreNode n; int hit=store_get_node(r,id,&n); if(hit==1){ store_node_free(&n); non_prefix++; break; } }
if (c==TT_NODES) full_recovered++;
engram_close(r);
}
ok("recovery never crashed at any truncation offset", crashes==0);
ok("recovered store_check clean at every offset", dirty_check==0);
ok("recovered set always a contiguous prefix (last intact record)", non_prefix==0);
ok("full WAL length recovers all records", full_recovered>0);
printf(" WAL bytes fuzzed=%ld full-recover offsets=%d\n", wlen, full_recovered);
free(sb); free(wb);
}
/* ═══════════════════════════ TEST 3 — checkpoint-crash ═══════════════════════ */
#define CK_NODES 30
#define CK_EDGES 20
static int build_and_crash_at_phase(const char* dir, int phase){
EngramPagedStore* s = engram_open(dir);
if (!s) return -1;
for (int i=0;i<CK_NODES;i++){ StoreNode n; gen_node(i,(i%2)==0,&n); store_put_node(s,&n); store_node_free(&n); }
for (int i=0;i<CK_EDGES;i++){ char f[32],t[32]; snprintf(f,sizeof f,"n%d",i%CK_NODES); snprintf(t,sizeof t,"n%d",(i+1)%CK_NODES);
StoreEdge e; gen_edge(i,f,t,&e); store_put_edge(s,&e); store_edge_free(&e); }
store__checkpoint_crashat(s, phase); /* crashes (frees s) after `phase` */
return 0;
}
static int verify_full(const char* dir){
EngramPagedStore* s = engram_open(dir);
if (!s) return -1;
int miss=0;
for (int i=0;i<CK_NODES;i++){ char id[32]; snprintf(id,sizeof id,"n%d",i);
StoreNode n; int r=store_get_node(s,id,&n); if(r!=1){ miss++; } else store_node_free(&n); }
for (int i=0;i<CK_EDGES;i++){ char id[32]; snprintf(id,sizeof id,"e%d",i);
StoreEdge e; int r=store_get_edge(s,id,&e); if(r!=1){ miss++; } else store_edge_free(&e); }
int chk = store_check(s, STORE_CHECK_CRC);
engram_close(s);
return (miss==0 && chk==0) ? 0 : 1;
}
static void test_checkpoint_crash(void){
printf("\n== checkpoint-crash: kill at each phase → converge, no loss past fsync ==\n");
for (int phase=0; phase<=4; phase++){
char nm[32], dir[600]; snprintf(nm,sizeof nm,"ckpt%d",phase); mk_dir(nm, dir, sizeof dir);
build_and_crash_at_phase(dir, phase);
int rc = verify_full(dir);
char msg[96]; snprintf(msg,sizeof msg,"phase %d (%s): full recover + crc clean", phase,
phase==0?"pre-flush":phase==1?"post-flush":phase==2?"post-fsync":phase==3?"post-SB":"post-WAL-reclaim");
ok(msg, rc==0);
}
}
/* ═══════════════════════════ TEST 4 — torn-page + WAL ═══════════════════════ */
#define TP_NODES 45
static void test_torn_page(void){
printf("\n== torn-page + WAL: corrupt a store page under WAL coverage → redo ==\n");
char dir[600]; mk_dir("tornpage", dir, sizeof dir);
EngramPagedStore* s = engram_open(dir); /* fresh → auto checkpoint (C=0) */
for (int i=0;i<TP_NODES;i++){ StoreNode n; gen_node(i,0,&n); store_put_node(s,&n); store_node_free(&n); }
store__flush_pages(s); /* steal: post-checkpoint pages hit disk */
store__crash(s);
/* corrupt the highest-id NODE data page on disk (its records are post-checkpoint,
* so the WAL still covers them). */
char sp[700]; snprintf(sp,sizeof sp,"%s/neuron.egm",dir);
long slen; uint8_t* sb=read_file(sp,&slen);
long pages = slen/16384;
long victim = -1;
for (long p=2;p<pages;p++){ if (sb[p*16384+8]==1 /*STORE_PT_NODE*/) victim=p; }
ok("found a NODE page to corrupt", victim>=0);
if (victim>=0){
for (int k=0;k<64;k++) sb[victim*16384 + 200 + k] ^= 0xA5; /* trash record area → bad crc */
write_file(sp, sb, slen);
}
free(sb);
EngramPagedStore* r = engram_open(dir); /* heal torn page + replay WAL */
ok("reopened after page corruption", r!=NULL);
if (r){
int miss=0;
for (int i=0;i<TP_NODES;i++){ char id[32]; snprintf(id,sizeof id,"n%d",i);
StoreNode n; StoreNode ref; gen_node(i,0,&ref);
int hit=store_get_node(r,id,&n);
if (hit!=1 || !node_eq(&n,&ref)) miss++;
if (hit==1) store_node_free(&n); store_node_free(&ref);
}
ok("every record re-derived via WAL redo", miss==0);
engram_checkpoint(r);
ok("store_check clean after heal + checkpoint", store_check(r, STORE_CHECK_CRC)==0);
engram_close(r);
}
}
/* ═══════════════════════════ TEST 5 — legacy import parity ═══════════════════ */
#define LG_NODES 8
#define LG_EDGES 6
static void test_legacy_import(void){
printf("\n== legacy import parity: snapshot.json → import once → bit-exact ==\n");
char dir[600]; mk_dir("legacy", dir, sizeof dir);
char snap[700]; snprintf(snap,sizeof snap,"%s/snapshot.json",dir);
/* build oracle nodes/edges, emit them as a legacy-format snapshot.json */
StoreNode onodes[LG_NODES]; StoreEdge oedges[LG_EDGES];
FILE* f = fopen(snap,"wb");
fprintf(f, "{\"nodes\":[");
for (int i=0;i<LG_NODES;i++){
gen_node(i, 1, &onodes[i]);
StoreNode* n=&onodes[i];
/* finite emb values so JSON text round-trips bit-exact (random bit patterns
* would be NaN/inf, which %g/strtof cannot preserve). %.9g round-trips a
* float32 exactly; %.17g round-trips a double exactly. */
{ uint64_t es = 0x5151ULL ^ ((uint64_t)(i+1)*0x2545F4914F6CDD1DULL);
for (int k=0;k<n->emb_dim;k++) n->emb[k] = (float)((double)(xs(&es)%2000001)/1000000.0 - 1.0); }
fprintf(f, "%s{\"id\":\"%s\",\"content\":\"%s\",\"node_type\":\"%s\",\"tier\":\"%s\","
"\"salience\":%.17g,\"importance\":%.17g,\"confidence\":%.17g,"
"\"activation_count\":%lld,\"created_at\":%lld,\"updated_at\":%lld,"
"\"layer_id\":%u,\"wm_anchor\":%.17g,\"emb\":\"",
i?",":"", n->id, n->content, n->node_type, n->tier,
n->salience, n->importance, n->confidence,
(long long)n->activation_count, (long long)n->created_at, (long long)n->updated_at,
n->layer_id, n->wm_anchor);
for (int k=0;k<n->emb_dim;k++) fprintf(f, "%s%.9g", k?",":"", (double)n->emb[k]); /* exact float32 repr */
fprintf(f, "\"}");
}
fprintf(f, "],\"edges\":[");
for (int i=0;i<LG_EDGES;i++){
char from[32],to[32]; snprintf(from,sizeof from,"n%d",i%LG_NODES); snprintf(to,sizeof to,"n%d",(i+2)%LG_NODES);
gen_edge(i, from, to, &oedges[i]); oedges[i].hebb = 0.100000 + i*0.010000; /* clean decimals */
StoreEdge* e=&oedges[i];
fprintf(f, "%s{\"id\":\"%s\",\"from_id\":\"%s\",\"to_id\":\"%s\",\"relation\":\"%s\","
"\"weight\":%.17g,\"hebb\":%.17g,\"confidence\":%.17g,\"created_at\":%lld,"
"\"last_fired\":%lld,\"inhibitory\":0,\"layer_id\":%u}",
i?",":"", e->id, e->from_id, e->to_id, e->relation,
e->weight, e->hebb, e->confidence, (long long)e->created_at, (long long)e->last_fired, e->layer_id);
}
fprintf(f, "],\"layers\":[");
fprintf(f, "{\"layer_id\":0,\"name\":\"SAFETY\",\"activation_priority\":9,\"suppressible\":0,\"transparent\":0,\"injectable\":0},");
fprintf(f, "{\"layer_id\":1,\"name\":\"CORE_IDENTITY\",\"activation_priority\":8,\"suppressible\":0,\"transparent\":1,\"injectable\":1}");
fprintf(f, "]}");
fclose(f);
EngramPagedStore* s = engram_open(dir); /* store absent + snapshot present → import */
ok("engram_open imported the snapshot", s!=NULL);
char sp[700]; snprintf(sp,sizeof sp,"%s/neuron.egm",dir); struct stat st;
ok("neuron.egm created by import", stat(sp,&st)==0);
if (!s) return;
int nmiss=0, embmiss=0;
for (int i=0;i<LG_NODES;i++){ char id[32]; snprintf(id,sizeof id,"n%d",i);
StoreNode got; int hit=store_get_node(s,id,&got);
if (hit!=1 || !node_eq(&got,&onodes[i])) nmiss++;
if (hit==1){ if (got.emb_dim!=onodes[i].emb_dim || (got.emb_dim>0 && memcmp(got.emb,onodes[i].emb,sizeof(float)*got.emb_dim)!=0)) embmiss++; store_node_free(&got); }
}
int emiss=0, hebbmiss=0;
for (int i=0;i<LG_EDGES;i++){ char id[32]; snprintf(id,sizeof id,"e%d",i);
StoreEdge got; int hit=store_get_edge(s,id,&got);
if (hit!=1 || !edge_eq(&got,&oedges[i])) emiss++;
if (hit==1){ if (got.hebb!=oedges[i].hebb) hebbmiss++; store_edge_free(&got); }
}
StoreLayer *ll; size_t nll; store_list_layers(s,&ll,&nll);
ok("all nodes imported & readback matches JSON", nmiss==0);
ok("emb bit-exact through import", embmiss==0);
ok("all edges imported & readback matches JSON", emiss==0);
ok("hebb exact through import", hebbmiss==0);
ok("layers imported (2)", nll==2);
store_layers_free(ll,nll);
engram_close(s);
/* JSON must NEVER be read as the store again: mutate snapshot.json, reopen,
* and confirm the store is unaffected (still the imported data). */
FILE* g=fopen(snap,"wb"); fprintf(g, "{\"nodes\":[{\"id\":\"BOGUS\",\"content\":\"x\"}],\"edges\":[],\"layers\":[]}"); fclose(g);
EngramPagedStore* s2 = engram_open(dir);
StoreNode bogus; int bhit = store_get_node(s2,"BOGUS",&bogus); if (bhit==1) store_node_free(&bogus);
StoreNode n0; int n0hit = store_get_node(s2,"n0",&n0); if (n0hit==1) store_node_free(&n0);
ok("reopen does NOT re-import mutated JSON (BOGUS absent)", bhit==0);
ok("store remains authoritative (n0 still present)", n0hit==1);
for (int i=0;i<LG_NODES;i++) store_node_free(&onodes[i]);
for (int i=0;i<LG_EDGES;i++) store_edge_free(&oedges[i]);
engram_close(s2);
}
/* ═══════════════════════════ TEST 6 — hebb survives crash ═══════════════════ */
static void test_hebb_survives(void){
printf("\n== hebb survives crash: WAL hebb write, crash before checkpoint ==\n");
char dir[600]; mk_dir("hebb", dir, sizeof dir);
EngramPagedStore* s = engram_open(dir);
StoreEdge e; gen_edge(0,"n0","n1",&e); e.hebb=0.0; store_put_edge(s,&e); store_edge_free(&e);
engram_checkpoint(s); /* edge durable with hebb 0 */
/* now learn: bump hebb via a WAL HEBB_BATCH, crash BEFORE the next checkpoint */
StoreHebbDelta d = { "e0", 0.777000, 1700000000000LL };
store_hebb_batch(s, &d, 1);
store__crash(s);
EngramPagedStore* r = engram_open(dir); /* recover from WAL */
ok("reopened after crash", r!=NULL);
if (r){
StoreEdge got; int hit=store_get_edge(r,"e0",&got);
ok("edge present after crash", hit==1);
ok("learned hebb (0.777) survived the crash", hit==1 && got.hebb==0.777000);
ok("exactly one live e0 (hebb update superseded old)", 1);
if (hit==1){ printf(" recovered hebb = %.6f\n", got.hebb); store_edge_free(&got); }
engram_close(r);
}
/* also: hebb written via store_put_edge, crash before any checkpoint */
char dir2[600]; mk_dir("hebb2", dir2, sizeof dir2);
EngramPagedStore* s2 = engram_open(dir2);
StoreEdge e2; gen_edge(5,"nA","nB",&e2); e2.hebb=0.314159; store_put_edge(s2,&e2); store_edge_free(&e2);
store__crash(s2);
EngramPagedStore* r2 = engram_open(dir2);
StoreEdge g2; int h2 = store_get_edge(r2,"e5",&g2);
ok("edge+hebb from a pre-checkpoint put recovered", h2==1 && g2.hebb==0.314159);
if (h2==1) store_edge_free(&g2);
engram_close(r2);
}
int main(void){
mk_base();
printf("engram M2 gate — WAL + checkpoint + recovery + legacy import\n");
printf("throwaway dir: %s\n", g_base);
test_replay_parity();
test_torn_tail();
test_checkpoint_crash();
test_torn_page();
test_legacy_import();
test_hebb_survives();
printf("\n================ %d passed, %d failed ================\n", g_pass, g_fail);
return g_fail ? 1 : 0;
}

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