DESIGN FIT: three of round 7's five defects share ONE root — the conversation-history
layer persists only {role, content}, discarding tool provenance, session scoping, and the
distinction between a real user turn and an internal utility call. Fixes A and B RESTORE
Will's design rather than extend it: his agentic path already scopes history per session,
the plain path never got it, and his own source carries the TODO admitting the resulting
race (chat.el, handle_chat: "process-global key; concurrent /api/chat requests without
session_id race on this read-append-write"). Fix C repairs one join Will wrote that was
correct for a year and one we added last week. E1/E2 are ours.
FIX A — tool provenance in history (kills the FALSE CONFESSION)
Root cause, EXECUTED-verified: handle_chat_agentic recorded turns via hist_append, which
emits {"role","content"} only. server_tool_use blocks, web_search_tool_result blocks and
every citation were discarded, then replayed as text. On the next turn the model saw a
data-rich answer with zero evidence a search had happened, and its own permanent rule
("never describe a search you did not perform") left one conclusion available: that it
had fabricated the data. It apologised for a search it HAD run — four independent lines
of evidence confirm the search was real. The defect is not the model's honesty. It is
that we deleted the evidence and then asked it to account for itself.
Change: agentic_loop accumulates the source URLs it already walks past (citations and
web_search_tool_result content) and returns them as "sources"; handle_chat_agentic folds
tools_used + sources into a receipt line stored WITH the assistant turn. Receipts are
unconditional — a negative receipt ("no tools ran") is the other half of the guarantee,
because "no evidence of a tool" and "evidence of no tool" were previously identical in
the transcript. conv_history_block splits the receipt off before snipping so a long
answer cannot truncate away the evidence. The user never sees it: it is appended to the
history copy, not the reply.
FIX B — one history key for both paths (kills the BLANK STARE)
Root cause, EXECUTED-verified: the agentic path keyed history on session_hist_<id>; the
plain path was hard-wired to the process-global conv_history and never read session_id.
One conversation, two buckets. Proven in the guest engram: the scoped node held exactly
two turns starting at "Try again" while the earlier exchanges sat unscoped.
Change: conv_hist_key/conv_hist_label are now the single definition, used by BOTH paths;
session_id is threaded route -> layered_cycle -> layered_generate / conv_history_record.
The 2-line fallback (plain path reads the agentic key) was REJECTED: it keeps the
process-global bucket as a live write target, which is the bleed the TODO describes.
Also found and closed while threading: layered_cycle read session_id from the state key
"current_session_id", which is read here and WRITTEN NOWHERE in the entire source. It
was unconditionally "", so TODO(reliability #4) — per-session steward continuity — was
dead code that could never fire. It fires now.
LAZY SESSION, decided explicitly: we create the session EAGERLY at the door (app half,
ui#223) rather than migrating orphaned turns. Migration would copy the CONTENTS of a
process-global bucket, possibly another conversation's, into a named session — the bleed,
performed deliberately. Eager creation makes the situation impossible instead. Migration
is deliberately not implemented and must not be added without solving provenance first.
FIX C — the two text-join seams ("to.Good", byte-verified 0x77 0x2e 0x47)
Two bare `+` joins, written a year apart, had drifted into two answers to one question:
within-response block joins (Will's, 2026-05-03, latent until server-side web_search
began interleaving non-text blocks) and across-round joins (ours, 62af564).
Change: one named rule, text_join_sep, at both sites. NOT a blanket separator — a cited
answer splits MID-SENTENCE ("The current temperature is " + "86°F" + ", with "), so a
blanket separator shatters every sourced sentence. The rule takes the one bit that
distinguishes the cases: whether a NON-TEXT block intervened. Hoisting it also makes the
fix verifiable in the shipped binary, which an inline `+` is not.
FIX E1 — utility generations stay out of the transcript
Title generation ("Write a 3-6 word title...") and insight passes ran down the same plain
door as a real message and were recorded as if the user had typed them; the same calls are
the "model":"unknown" rows in usage.jsonl. is_utility_request reads an explicit utility
flag from the app, with the __title__/__insight__ id prefixes as a fallback for older
clients. Answered normally, never recorded.
FIX E2 — OPERATOR IDENTITY is scoped to tool-capable turns
The block (env USER/HOME, closing "This is a hard rule") was prepended to EVERY system
prompt including chat mode. On a Tools:Off turn there is no filesystem in reach, so it
governed nothing and merely supplied the loudest fact in the prompt — which is why the
model opened a fresh conversation with "You're test, on your machine at /Users/test".
Hoisted to operator_identity_block() and gated on !chat_mode. Unchanged wherever a file
or command tool can actually be reached.
ALSO: agentic_loop's per-session history persist had a second hand-rolled copy of
conv_history_persist with a different label expression, different salience scores and
different tags for the same node. Since both now derive the label from conv_hist_label and
engram_node_full upserts by label, two score policies were writing one node. Collapsed to
one writer.
BUILD NOTE: dist/elp-c-decls.h is force-included by the documented link recipe and carried
the OLD C arities, so it is updated here. This is the build-support header, NOT the stale
generated dist/soul.c — no dist/*.c was read or edited; all engine changes are .el source.
chat.elh/soul.elh are committed because a first-pass build against the old signatures FAILS
(measured); the other regenerated headers are reverted as unrelated churn.
BUILT: 887,000 bytes, sha256 d632b061ad75269d6adeb52578d030eaf49e895d91289d7f946b19c08450d728
Zero el_str_concat(<int>, str_len(...)) sites (the BUG-PLAINCHAT-1 miscompile guard).
web_search_20250305 and disable_parallel_tool_use both still present — PR #108's web search
and the ADR-0005 stopgap are intact.
Refs neuron#109 (builds on it), neuron#78 (Receipt Contract — the real fix A is a stopgap for)
Co-Authored-By: Claude Opus 5 <noreply@anthropic.com>
Non-agentic /api/chat (the desktop app's default "Tools: Off" mode) returned the
user's own screened text as a bare non-JSON string. Every JSON client failed to
parse it and showed "Couldn't reach Neuron - it may be offline."
Root cause: f52d5bd (2026-06-11) correctly moved the route onto the layer spine
(handle_chat -> layered_cycle), but L3 never got a generator — imprint_respond()
annotates its input and returns it. Two pieces of the architecture were already
waiting for that step: layered_cycle parks a bell directive in the state key
build_system_prompt is written to consume, and build_system_prompt carries a
chat_mode ("no tools") flag with no live caller.
The fix composes rather than replaces. Wiring handle_chat would have removed
safety_screen, the hard-bell short-circuit, the whole stewardship layer and
safety_validate — the only enforcing output gate in the codebase — in exchange
for a working reply (see _engine-websearch-20260804/SAFETY-STOP.md). Instead
layered_cycle keeps every gate, in order, and gains a generation step between
imprint_respond and safety_validate.
L1 screen -> guard -> hard-bell short-circuit -> L2a -> L2b -> L2c
-> L3 imprint_respond (prompt) -> L3b layered_generate (NEW) -> L1 validate
- chat.el: NEW layered_generate (L3 generation, no tools offered),
conv_history_block, conv_history_record.
FIX build_system_prompt never concatenated no_tools_rule into its
return — the "[NO TOOLS THIS TURN]" rule reached no model at all.
handle_chat annotated DO-NOT-WIRE with the reason.
- soul.el: layered_cycle gains L3b + post-validation turn bookkeeping.
- routes.el: NEW plain_chat_envelope; all three /api/chat dispatch sites wrap the
cycle's output. Built OUTSIDE the cycle so safety_validate always sees
raw model text — nothing to unwrap or rebuild on the crisis path.
Emits both `reply` and `response`: the desktop app reads `reply`,
the CLI tools and telegram-gateway read `response`.
Also fixes BUG-PLAINCHAT-1, a pre-existing CRITICAL crash on the crisis path.
elc compiles `let n: Int = pos + str_len(marker)` to el_str_concat() — string
concat on two integers — inside a block-expression initializer, segfaulting the
daemon (SIGSEGV in strlen). Six inline copies of the same " | ts:" parser had it:
two in layered_cycle L2c, two in engram_compile (live on the AGENTIC path too),
two in affective_context_prefix. A distress turn following an earlier affective
turn killed the whole process. Proven pre-existing: an unmodified baseline binary
crashes identically, and the same bad C is in the committed dist/soul.c. Fixed by
hoisting to one top-level function, affective_node_ts(), where the expression
compiles to integer addition — verified in the generated C.
Proof (throwaway HOME/engram, explicit NEURON_PORT, live chain untouched):
- Plain turn returns a JSON envelope with the provider's answer, not an echo.
- Captured request body: no `tools`, no `tool_choice`; system prompt carries the
NO-TOOLS rule. Tools:Off means no tool is offered, structurally.
- Hard bell: canned 988 message, and the provider request count does not move —
the message never reaches a model.
- Soft bell + a 2-char model reply: safety_validate's care phrase is appended to
the MODEL's output. Output gate acting, on this route.
- The L1 bell directive now reaches the model here for the first time (the state
addendum had a producer and no consumer).
- test_layered_cycle PASS; all six El suites byte-identical to baseline.
- verify-soul-contract.sh (bash 5.3): GATE PASS, 27/27, immutability PASS.
- The crash sequence that killed the baseline daemon now returns HTTP 200.
Not proven: no live Anthropic call — the login keychain refuses the key to a
non-interactive process (rc=24 errSecInteractionNotAllowed). Details and the
one-command close-out are in _engine-plainchat-20260805/README.md §7.
Builds on PR #108. dist/soul.c deliberately not regenerated — Will's toolchain.
Co-Authored-By: Claude Opus 5 <noreply@anthropic.com>
- awareness.el: curiosity auto_term was the raw first word of a WM
label with no term-quality scoring — observed seeds included What,
Colon, Prose, Context. Replaced the 7-word genre blocklist whack-a-
mole with a delimited stopword membership test (function words +
document-structure words); topical terms pass untouched. Verified
live: seeds now ReasonEdit, Reasoning-model, Self-review.
- routes.el + awareness.el: idle counter only reset on rare inbox
synthesis-requests, so idle==pulse always (zero information).
handle_request now stamps soul.last_activity_ts on every inbound
HTTP request; heartbeat emits idle_ms = ms since last request
(-1 until first request of a boot).
- neuron-api.el: beginSession concatenated a depth-2 spread plus the
unbounded self-hub neighbor dump — multi-MB response, doubled by
wrapper re-escaping, socket died on every call. Now depth-1 and
the hub dump dropped (identity loading has its own tool). Verified:
beginSession returns instead of closing the socket.
The model already narrates its intent in a text block before every tool call;
agentic_loop DISCARDED that prose on tool rounds. Now: (1) each loop round
appends {i, t: narration, tool} to state key run_progress_<sid>, reset at run
start, closed with {done:true}; (2) new GET /api/run-progress/<sid> returns the
ledger so clients poll live step updates during a run (the Cowork pattern,
no streaming needed); (3) tool_pending envelope gains a narration field;
(4) handle_config display default aligned to the intended product default
(claude-sonnet-4-5 silently became fresh-profile pickers' default).
Compiled proof for the running test bed:
neuron-container-build/soul-narrated-runs-20260713.patch (applies on top of
soul-webfix-20260711.patch); E2E-verified live: ledger filled DURING an agentic
run (narration + tool per round), safety-contact and workspace scoping intact.
Evidence for why: Tim's 2026-07-13 research run — 9 minutes of silence, then a
timeout banner, zero step visibility (compounded by the Haiku 4.5 incident
14:44-15:24 UTC same morning).
Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
Main already contained the connector proxy, safety module, seeding ratio
guard, and neuron-api node CRUD that Tim added — these were incorporated
via earlier parallel sessions. Taking main for all conflicted files
(superset implementations).
Unique contributions carried forward:
- flag_true() in routes.el: tolerates agentic:1 (integer) from the
el-src UI in addition to agentic:true (bool) from the Kotlin UI.
- memory.elh: auto-merged timestamp bump.
The is_pending / skip-auto-persist logic was already in main's routes.el.
- PR #60: inject operator home dir into system prompt (#30)
Adds OPERATOR IDENTITY section so the LLM correctly resolves
'my files/notes/desktop' to the actual running user's $HOME.
Prevents identity confusion between imprint author and operator.
- PR #61: plan-mode endpoint POST /api/chat {mode:'plan'} (#27)
Adds handle_chat_plan — returns {steps:[{id,title,detail}]} JSON.
Wired into all three /api/chat route handlers. Grounds the plan
via engram_compile (same as agentic path) for context awareness.
dist changes:
- soul.c: both PRs compiled in; build_system_prompt updated to
2-param signature (ctx, chat_mode); handle_chat_plan added
- chat.c/routes.c/chat.elh: individual module outputs updated
- elp-c-decls.h: remove stale 1-param build_system_prompt decl,
add handle_chat_plan declaration
- soul.elh.c: new soul header declarations file (from PR #60)
Compile verified: cc -O2 -DHAVE_CURL soul.c el_runtime.c -lcurl
Binary: 805K arm64, smoke test passes (port in use = expected).
str_slice(clean, 16, ...) left a leading slash on node_type ('/BacklogItem'), so
engram_scan_nodes_by_type_json matched nothing and list/<type> returned [] for EVERY type — silently
breaking backlog + typed-node listing across the app and MCP tools (reviewBacklog). Proven live: the
literal-scan endpoint /api/neuron/knowledge returns nodes; /api/neuron/list/Knowledge returned []. elc-clean.
NOTE: soul-core — needs dist/soul.c regen (Will); rides the same rebuild as #56/#57.
Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
Adds /api/connectors/call -> connectd /mcp/call, so the app can invoke a connector tool (e.g. WhatsApp
get_pairing_qr / get_login_status for the pairing UI) through the soul, keeping app->soul->connectd
intact (UI never hits connectd directly) and working for future remote/hosted clients. elc-clean.
NOTE: soul-core change — needs dist/soul.c regen (Will), can ride the same rebuild as PR #56.
Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
- Issue #3: err_404/err_405 now emit HTTP 404/405 via __status__ envelope instead of HTTP 200
- Issue #4: add auth_check() function to handle_request; enforces NEURON_TOKEN on all routes except /health and /lineage
- Issue #5: missing required params now return HTTP 400 (__status__ envelope) in /api/chat (GET+POST), /imprint/contextual, /imprint/user, and handle_chat
- Issue #6: LLM unavailable in handle_chat now returns HTTP 503 instead of HTTP 200
- Issue #7: add 32 KB message size guard on POST /api/chat before engram_compile and LLM
- Issue #8: add TODO comment to route_health documenting the live-engram-query problem and the /health/deep split plan
- Issue #9: add comment to hist_trim documenting fragile str_index_of parser and silent data corruption risk
- Issue #10: add TODO comment in handle_request documenting missing per-IP rate limiting
- Issue #11: fix connectd_post temp file collision — add monotonic sequence counter so concurrent requests get unique paths
- Issue #12: fix call_mcp_bridge fixed temp file race — add monotonic sequence counter for unique paths under concurrent load
- Issues #1/#2: add TODO comment in handle_request documenting EL no-exception limitation and SIGSEGV handler gap
- Add per-IP in-memory rate limiter (60 req/min default, configurable via
soul_rate_limit state key; /health exempt; loopback callers skipped)
- Extend /health with uptime_secs (from soul_boot_ts) and live LLM probe
- Add missing_param 400 guard on POST /api/chat before passing to LLM
- Standardise error envelopes: add "code" field to err_404/err_405 and all
missing-param returns; route_synthesize now errors clearly instead of
returning the misleading {"mechanism":"did not engage"} on bad input
- Document streaming gap in /api/chat (SSE not implemented, note added)
- handle_request gains ip param; rate_limit_check wired at entry point
fix(soul): add HTTP-engram guard to safe_to_seed — when ENGRAM_URL is set
the HTTP Engram owns persistence; genesis must never save to local snapshot
regardless of node counts (was: guard_disk forced to empty string, making
the ratio check vacuously true and allowing init_soul_edges+engram_save).
fix(soul): use multiplication form for ratio guard — node_count * 16000 <
disk_len avoids floor-division truncation that underestimated boundary files
(250KB / 16000 = 15.6, floors to 15; a 15-node graph wrongly passed old guard).
fix(chat): add safety_augment_system to handle_chat_as_soul,
handle_dharma_room_turn, and handle_dharma_room_turn_agentic — all three
called the LLM without Hard Bell evaluation, leaving users in dharma rooms
without crisis resource routing.
fix(neuron-api): add api_persisted read-back to handle_api_define_process —
was the only write handler that returned ok:true without verifying the node
was actually written to engram.
fix(routes): unique temp file path in connectd_post — replaces fixed
/tmp/neuron-connectors-req.json with a timestamped path to prevent
collision if concurrency is added or two soul instances share a machine.
test: add tests/test_bell_safety.el — covers safety_detect_bell_level
(none/soft/hard), safety_classify_hard_bell (abuse/self_harm routing),
safety_normalize (smart-quote), safety_augment_system, and
handle_safety_contact_post (validation + read-back).
test: add tests/test_soul_guard.el — pure-function logic tests for the
safe_to_seed predicate: 200KB boundary, 47MB/63-node clobber scenario,
HTTP-engram mode, multiplication vs division truncation at 250KB.
test: add tests/test_api_define_process.el — verifies the define_process
write is read-back verified after the fix.
The first registration called route_sessions() which searched for a
'session-start' label that no longer exists, returning an empty array
on every list request and making the sidebar appear empty after restart.
The second registration (dead code) called the correct session_list().
Removes route_sessions() entirely and the stale first route block.
Also wires up session_delete() and session_update_patch() — both existed
in sessions.el but had no HTTP routes — via new DELETE and PATCH blocks.
- sessions.el: new sessions module with session management and approval gate
- routes.el: wire /api/sessions routes (list, get, create, approve, tool_result)
- chat.el: thread-aware activation — short messages anchor to last reply
before engram compilation so follow-ups stay on-topic
- chat.el: agentic path tracks per-session history (session_hist_{id})
instead of shared conv_history, seeding each turn with prior context
- chat.el: add call_neuron_mcp, dispatch_tool, is_builtin_tool, next_bridge_id
agentic_loop, bridge_save, agentic_resume, handle_tool_result
- dist/soul: rebuild with all of the above
Applies connector-specific additions from feat/connectors-soul:
- chat.el: connector_tools_json(), agentic_tools_all(), call_mcp_bridge(),
tool_auto_approved() and mcp__ dispatch in dispatch_tool()
- routes.el: connectd_get/post, handle_connectors(), /api/connectors routing
in GET and POST sections
- MEMORY_RECALL_BUG.md: investigation notes on memory retrieval failure
The agentic loop rewrite in the source branch was not applied — it conflicts
with the tool-bridge pattern from PR #5 which is the chosen design for
client-side MCP tool execution. The connectors themselves are now fully
wired: connector tools surface as mcp__<server>__<tool> in the tools array
and dispatch to neuron-connectd via call_mcp_bridge().
Resolves conflicts by keeping main's full safety/stewardship/imprint implementations.
PR #9 uniquely contributes: layered_cycle() in soul.el, route wiring in routes.el,
soul.elh export, and the layer composition test suite.
Adds the soul side of the connectors feature (spec: docs/research/
mcp-connectors-adoption-spec.md). The soul thin-proxies the neuron-connectd
bridge on 127.0.0.1:7771 so the UI talks to one origin and never reaches the
bridge directly.
routes.el:
- handle_connectors + connectd_get/connectd_post helpers (POST bodies go via
a temp file + curl -d @file, so model/UI input can't reach the shell).
- GET /api/connectors and POST /api/connectors/{add,toggle,auto-approve,
remove,secret,oauth/start} registered in both GET and POST routers.
chat.el:
- tool_auto_approved(): an mcp__* tool skips the approval card only when its
server is explicitly opted in (off by default; built-in tools unaffected;
bridge down -> false). Wired into the agentic approval gate so an
auto-approved connector tool flows straight to execution.
Regenerated dist/chat.c and dist/routes.c. Verified live on :7770: real chat,
recall, and /api/connectors all work after promotion.
Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
- Add stub implementations of safety.el, stewardship.el, and imprint.el
with their .elh headers so the branch compiles without the dependency
branches (feat/layer-safety, feat/layer-stewardship, feat/layer-imprint).
Each stub documents the layer contract it must satisfy when replaced.
- Fix GET /api/chat bypass: update the GET branch in handle_request to
call layered_cycle() consistently with the POST branch, rather than
calling handle_chat() directly and skipping the consciousness stack.
- Export layered_cycle() from soul.elh (and dist/soul.elh) so routes.el
can resolve the symbol via the header import.
- Fix steward_action else branch: add explicit handling for "block"
(returns safe refusal immediately, skips L3) and "redirect" (uses
redirect_to field). Unknown actions now log a warning and fall back to
the screened input rather than silently passing an empty string to
imprint_respond().
- Document hard_bell path: clarify that omitting auto_persist/history
update is intentional security isolation, and document the safety_validate
second-param sentinel contract ("hard_bell" vs screen_action).
When handle_chat_agentic hits a tool the soul cannot run in-process (an MCP
connector/plugin surfaced by the Kotlin desktop app), instead of returning
"unknown tool" it now suspends the agentic loop and returns a tool_pending
envelope so the CLIENT executes the tool and posts the result back. Built-in
tools (read_file/write_file/web_get/search_memory/run_command) and Anthropic's
native web_search are unchanged.
Client contract:
- Soul returns (HTTP 200) on an unknown tool:
{ "tool_pending": true, "session_id": "br-...", "call_id": "<tool_use_id>",
"tool_name": "...", "tool_input": { ... }, "model": "...",
"agentic": true, "tools_used": [...] }
- Client runs the MCP tool, then POSTs to
/api/sessions/{session_id}/tool_result
with body:
{ "call_id": "<the call_id from the envelope>",
"content": "<MCP tool output as a string>" }
- Soul resumes the loop and returns the same envelope shape: either a final
{ "reply": ..., "tools_used": [...] }
or another tool_pending if the continuation needs a further MCP tool
(fully chainable). Saved continuation is one-shot (cleared on resume).
elc-verified (--target=c, exit 0, no stderr) on chat.el, routes.el, and the
full soul.el import graph. Needs Will's build to ship.
Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
The UI needs full memory CRUD; the soul had create (handle_api_remember)
and the older /memory/forget + /memory/evolve, but no endpoints matching
the UI's delete/update contract.
POST /api/neuron/memory/delete {"id"}
Hard delete. engram_forget is a true delete primitive (removes the node
and all incident edges from the engram store), so no soft-delete
fallback is needed. Unlike /memory/forget, this checks the node exists
first - engram_forget silently no-ops on unknown ids, and a bad id must
return an error, not fake success. Protected identity/values nodes are
blocked, same as the other accumulation-path handlers.
POST /api/neuron/memory/update {"id","content"}
Evolve-style update. The engram runtime has no in-place node mutation
primitive (only node-create, strengthen, forget, connect), so update
creates a new Memory node and wires a supersedes edge to the prior one,
same pattern as handle_api_evolve_knowledge. Unlike /memory/evolve, id
is required and must reference an existing node; create+link delegates
to handle_api_evolve_memory. Returns {id, supersedes, ok}.
Both files syntax-checked with elc --target=c (exit 0, no stderr).
Compile-verified only - local builds cannot run the soul; needs Will's
build for runtime verification.
Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
Block evolve_knowledge, evolve_memory, forget, and link_entities (to_id
direction) from modifying the 15 hardcoded identity and values node IDs.
Returns HTTP 403 with a hint to use the cultivation path instead.
Add POST /api/neuron/cultivate — the bypass endpoint for intentional
cultivation sessions. Accepts { "operation": "...", ...args } and performs
the same operations without the protection check.
Add handle_api_forget and handle_api_evolve_memory as new protected-by-
default handlers, routed at /api/neuron/memory/forget and
/api/neuron/memory/evolve respectively.
Tested: 10 verification cases — 403 on all blocked targets, 200 on
non-protected nodes and FROM-direction links, cultivate bypass confirmed.
neuron-api.el is a new first-class El module that implements all Neuron
cognitive API handlers natively — no HTTP round-trips, no MCP wrapper,
direct engram builtin calls. All capabilities that previously lived in
the MCP wrapper adapter now live here in the soul.
Handlers: begin_session, compile_ctx, remember, recall, search_knowledge,
browse_knowledge, capture_knowledge, evolve_knowledge, promote_knowledge,
browse_processes, define_process, log_state_event, list_state_events,
inspect_config, tune_config, inspect_graph, link_entities, list_typed,
consolidate.
Routes wired in routes.el under /api/neuron/* (GET + POST).
Also compiles all loop-1/loop-2 .el source changes into dist/*.c and
rebuilds the binary. memory.elh and neuron-api.elh updated with new exports.
Adds handle_dharma_room_turn_agentic to chat.el — same full tool loop
as handle_chat_agentic but reads transcript directly (not message), and
returns {response, cgi_id, tools_used} to match the dharma room shape.
Registers dharma_room_turn_agentic as a new event type in routes.el so
the studio can dispatch @neuron turns through this dedicated path.
- soul.el: SOUL_CGI_ID, SOUL_ENGRAM_PATH, SOUL_IDENTITY env vars;
state_set("soul_snapshot_path") so callers can find it; only call
init_soul_edges() when cgi_id == "ntn-genesis"
- chat.el: handle_dharma_room_turn — soul builds its own context from its
own engram, assembles system prompt, calls LLM, persists episodic memory;
also fix is_new_tool scoping bug in handle_chat_agentic (use has_tool)
- routes.el: wire dharma_room_turn event type before chat_as_soul branch
- rebuild dist/neuron: handle_dharma_room_turn now compiled in
elp-input.el: replace broken engram_search_json with engram_activate_json
as Layer 1. Layer 2 suppress/filter keeps nodes with non-zero salience/
importance. Reason step extracts patient from top activated node content.
ELP grammar realizes the response via generate().
routes.el: add 'elp' event_type to handle_dharma_recv so the studio can
route ELP requests through dharma.
Replace scan-by-offset fallback with engram_get_node_json calls for the
known high-salience identity nodes (family, origin). Offset-based scanning
is order-dependent and unreliable; direct ID fetch is stable regardless of
snapshot position. Ensures biographical context (Fox, Bobby, etc.) is
always in the system prompt when vector search returns nothing.
Routes a new event_type "chat_as_soul" through dharma/recv. The Studio
preassembles the system_prompt + transcript and dispatches per-speaker;
the soul-binary just performs the LLM call as the requested speaker_slug.
No engram_compile here — each soul has its own engram (88xx) and the
Studio queries it before composing the prompt.
Also: track the previously-untracked split source modules (chat, routes,
memory, awareness, studio) and add build.sh so the binary can be rebuilt
without the studio’s concat trick. elb resolves the import graph and
emits one .c per .el; we link them together with cc. dist/soul-el now
points at dist/neuron via symlink (matching the launchctl plist).